Search Results (2,391)

Synthetic aperture radar (SAR) systems are of paramount importance to remote sensing applications, including Earth observation and environmental monitoring. Accurate calibration of these systems is imperative to ensuring the accuracy and reliability of the acquired data. A central component of the calibration process is the antenna model, which serves as a fundamental reference for characterizing the radiation pattern, gain, and overall performance of SAR systems. The present paper sets out to describe the implementation and validation of a phased-array antenna model for Synthetic Aperture Radar Systems (SARAS) in MATLAB R2024a. The antenna model was developed for utilization in the Spanish Earth observation missions PAZ and PRECURSOR-ECO. The antenna model incorporates a number of functions, which are divided into two primary modules: the first of these is the antenna pattern generation (APG) module, and the second is the antenna excitation generation (AEG) module. The present document focuses on the AEG, the function of which is to generate patterns for all required beams. These patterns are optimized and matched to specific calculated masks using an ad hoc genetic algorithm (GA). In consideration of the aforementioned factors, the AEG module generates a set of complex excitations corresponding to the required beam from different satellite operational beams, based on several radiometrically defined parameters.  Full article

Understanding alpine plants’ survival and reproduction is crucial for their conservation in climate change. Based on 423 valid distribution points, this study utilizes the MaxEnt model to predict the potential habitat and distribution dynamics of Leontopodium nanum under both current and future climate scenarios, while clarifying the key factors that influence its distribution. The primary ecological drivers of distribution are altitude (2886.08 m–5576.14 m) and the mean temperature of the driest quarter (−6.60–1.55 °C). Currently, the suitable habitat area is approximately 520.28 × 10⁴ km², covering about 3.5% of the global land area, concentrated mainly in the Tibetan Plateau, with smaller regions across East and South Asia. Under future climate scenarios, low-emission (SSP126), suitable areas are projected to expand during the 2050s and 2070s. High-emission (SSP585), suitable areas may decrease by 50%, with a 66.07% reduction in highly suitable areas by the 2070s. The greatest losses are expected in the south-eastern Tibetan Plateau. Regarding dynamic habitat changes, by the 2050s, newly suitable areas will account for 51.09% of the current habitat, while 68.26% of existing habitat will become unsuitable. By the 2070s, newly suitable areas will rise to 71.86% of the current total, but the loss of existing areas will exceed these gains, particularly under the high-emission scenario. The centroid of suitable habitats is expected to shift northward, with migration distances ranging from 23.94 km to 342.42 km. The most significant shift is anticipated under the SSP126 scenario by the 2070s. This study offers valuable insights into the distribution dynamics of L. nanum and other alpine species under the context of climate change. From a conservation perspective, it is recommended to prioritize the protection and restoration of vegetation in key habitat patches or potential migration corridors, restrict overgrazing and infrastructure development, and maintain genetic diversity and dispersal capacity through assisted migration and population genetic monitoring when necessary. These measures aim to provide a robust scientific foundation for the comprehensive conservation and sustainable management of the grassland ecosystem on the Qinghai–Tibet Plateau. Full article

Coffee beverage quality is determined by a complex interaction of genetic and environmental factors, including specific biochemical characteristics. In this context, the present study aimed to estimate the genetic parameters of elite irrigated Conilon coffee genotypes in the Cerrado over two consecutive years based on the biochemical characteristics of the beans, assessed by near-infrared spectroscopy (NIRS). The research was conducted at the Embrapa Cerrados experimental field, using the unit’s elite collection. Levels of chlorogenic acid (5-ACQ), caffeine, sucrose, citric acid and trigonelline were analyzed in the raw beans of 18 genotypes harvested in two consecutive years. Data were subjected to analysis of variance in a time-subdivided plot design, considering genotypes as plots and years as subplots, with means grouped by the Scott-Knott test at 5% significance. Results showed significant genetic variability for caffeine, sucrose and trigonelline, while chlorogenic and citric acid levels did not differ significantly among genotypes. A significant genotype × year interaction was observed for caffeine, sucrose, and 5-ACQ. Estimated heritabilities were high for caffeine (85.5%), trigonelline (80.1%), sucrose (62%) and citric acid (60%). Selection gains were positive for sucrose (5.58%), citric acid (10.01%) and trigonelline (8.27%), and negative for caffeine (−6.87%) and 5-ACQ (−0.47%). It is concluded that among the compounds evaluated, caffeine shows the greatest potential for selection, enabling effective gains in raw bean composition, while sucrose and trigonelline present moderate potential for genetic improvement. Full article

Legumes are vital sources of protein, dietary fibre and nutrients, making them crucial for global food security and sustainable agriculture. However, their widespread acceptance and consumption are often limited by undesirable sensory characteristics, such as “a beany flavour”, bitterness or variable textures. Addressing these challenges requires a comprehensive understanding of the complex molecular mechanisms governing appearance, aroma, taste, flavour, texture and palatability in legumes, aiming to enhance their sensory appeal. This review highlights the transformative power of multi-omics approaches in dissecting these intricate biological pathways and facilitating the targeted enhancement of legume sensory qualities. By integrating data from genomics, transcriptomics, proteomics and metabolomics, the genetic and biochemical networks that directly dictate sensory perception can be comprehensively unveiled. The insights gained from these integrated multi-omics studies are proving instrumental in developing strategies for sensory enhancement. They enable the identification of key biomarkers for desirable traits, facilitating more efficient marker-assisted selection (MAS) and genomic selection (GS) in breeding programs. Furthermore, a molecular understanding of sensory pathways opens avenues for precise gene editing (e.g., using CRISPR-Cas9) to modify specific genes, reduce off-flavour compounds or optimise texture. Beyond genetic improvements, multi-omics data also inform the optimisation of post-harvest handling and processing methods (e.g., germination and fermentation) to enhance desirable sensory profiles and mitigate undesirable ones. This holistic approach, spanning from the genetic blueprint to the final sensory experience, will accelerate the development of new legume cultivars and products with enhanced palatability, thereby fostering increased consumption and ultimately contributing to healthier diets and more resilient food systems worldwide. Full article

Recent findings highlight that Reelin, a glycoprotein involved in neural development, synaptic plasticity, and neuroinflammation, plays some specific roles in neurodegenerative disorders associated with aging, such as age-related macular degeneration (AMD) and Alzheimer’s disease (AD). Reelin modulates synaptic function and guarantees homeostasis in neuronal-associated organs/tissues (brain and retina). The expression of Reelin is dysregulated in these neurological disorders, showing common pathways depending on chronic neurogenic inflammation and/or dysregulation of the extracellular matrix in which Reelin plays outstanding roles. Recently, the relationship between AMD and AD has gained increasing attention as they share many common risk factors (aging, genetic/epigenetic background, smoking, and malnutrition) and histopathological lesions, supporting certain pathophysiological crosstalk between these two diseases, especially regarding neuroinflammation, oxidative stress, and vascular complications. Outside the nervous system, Reelin is largely produced at the gastrointestinal epithelial level, in close association with innervated regions. The expression of Reelin receptors inside the gut suggests interesting aspects in the field of the gut–brain–eye axis, as dysregulation of the intestinal microbiota has been frequently described in neurodegenerative and behavioral disorders (AD, autism, and anxiety and/or depression), most probably linked to inflammatory, neurogenic mediators, including Reelin. Herein we examined previous and recent findings on Reelin and neurodegenerative disorders, offering findings on Reelin’s potential relation with the gut–brain and gut–brain–eye axes and providing novel attractive hypotheses on the gut–brain–eye link through neuromodulator and microbiota interplay. Neurodegenerative disorders will represent the ground for a future starting point for linking the common neurodegenerative biomarkers (β-amyloid and tau) and the new proteins probably engaged in counteracting neurodegeneration and synaptic loss. Full article

Background: In childhood acute lymphoblastic leukemia (ALL), in addition to classical chromosomal abnormalities, loss of heterozygosity (LOH), including copy-neutral LOH, is also observed. While LOH has been described in the literature, its clinical relevance in pediatric ALL remains unclear. The aim of this study is to identify and analyze patterns of LOH, assess their frequency, and evaluate their association with clinical characteristics and early treatment response during the induction phase of the ALL protocol. Methods: The study included 853 pediatric ALL patients, of whom 120 had B-ALL LOH+ and 58 had T-ALL LOH+. LOH was analyzed using CytoScan HD SNP microarrays. Patients were stratified using multiple correspondence analysis (MCA) and hierarchical clustering on principal components (HCPC), which identified three genetically and clinically distinct clusters. Results: In B-ALL, two clusters with extensive LOH—particularly involving chromosome 9—were associated with poor prognosis and suboptimal response to therapy. In contrast, Cluster 2, characterized by CDKN2A duplication and rare LOH, showed a favorable clinical course. In T-ALL, Cluster 1 had LOH in CDKN2A but favorable outcomes; Cluster 2 exhibited biallelic CDKN2A deletion and aggressive disease; Cluster 3 lacked CDKN2A alterations and showed a genetically stable profile. LOH was common on chromosomes not typically affected by trisomy and rare on those gained. Conclusions: Our study indicates that LOH profiling can positively influence patient stratification by identifying high-risk subgroups, inform prognosis by highlighting unfavorable genetic alterations, and help predict poor treatment response in specific clinical profiles. Full article

The emergence of anti-TNF agents has revolutionized the management of inflammatory bowel disease, yet a significant proportion of patients experience primary non-response or secondary loss of response due to immunogenicity. As the field of precision medicine advances, genetic predictors such as human leukocyte antigen (HLA) variants are gaining increasing attention. This review provides a comprehensive synthesis of current evidence on the role of HLA genotypes in inflammatory bowel disease susceptibility and disease behavior, with a focus on their mechanistic and clinical relevance in anti-TNF therapy. Special emphasis is placed on HLA-DQA1*05, a validated predictor of anti-drug antibody formation and reduced therapeutic durability. We explore the immunological basis of HLA-mediated immunogenicity, summarize pharmacogenetic and biomarker findings, and discuss how HLA typing may be integrated into treatment algorithms to improve patient stratification and long-term outcomes. As immunogenetics continues to inform clinical decision-making, understanding the interplay between HLA polymorphisms and therapeutic response offers new opportunities for biomarker-guided, personalized care in inflammatory bowel disease. Full article

The automotive suspension must perform competently to support comfort and safety when driving. Traditionally, car suspension control tuning is performed through trial and error or with classical techniques that cannot guarantee optimal performance under varying road conditions. The study aims at designing a Linear Quadratic Regulator-based Bacterial Memetic Algorithm (LQR-BMA) for suspension systems of automobiles. BMA combines the bacterial foraging optimization algorithm (BFOA) and the memetic algorithm (MA) to enhance the effectiveness of its search process. An LQR control system adjusts the suspension’s behavior by determining the optimal feedback gains using BMA. The control objective is to significantly reduce the random vibration and oscillation of both the vehicle and the suspension system while driving, thereby making the ride smoother and enhancing road handling. The BMA adopts control parameters that support biological attraction, reproduction, and elimination-dispersal processes to accelerate the search and enhance the program’s stability. By using an algorithm, it explores several parts of space and improves its value to determine the optimal setting for the control gains. MATLAB 2024b software is used to run simulations with a randomly generated road profile that has a power spectral density (PSD) value obtained using the Fast Fourier Transform (FFT) method. The results of the LQR-BMA are compared with those of the optimized LQR based on the genetic algorithm (LQR-GA) and the Virus Evolutionary Genetic Algorithm (LQR-VEGA) to substantiate the potency of the proposed model. The outcomes reveal that the LQR-BMA effectuates efficient and highly stable control system performance compared to the LQR-GA and LQR-VEGA methods. From the results, the BMA-optimized model achieves reductions of 77.78%, 60.96%, 70.37%, and 73.81% in the sprung mass displacement, unsprung mass displacement, sprung mass velocity, and unsprung mass velocity responses, respectively, compared to the GA-optimized model. Moreover, the BMA-optimized model achieved a −59.57%, 38.76%, 94.67%, and 95.49% reduction in the sprung mass displacement, unsprung mass displacement, sprung mass velocity, and unsprung mass velocity responses, respectively, compared to the VEGA-optimized model. Full article

Background. Medulloblastoma (MB) prognosis and response to therapy depend largely on genetic changes in tumor cells. Many genes and chromosomal abnormalities have been identified as prognostic factors, including amplification of MYC oncogenes, gains in 1q and 17q, deletions in 10q and 21p, or isochromosomes 17 (i(17)(q10)). The frequency of these abnormalities varies greatly between ethnic populations, but the frequency of specific abnormalities, such as MYCC and MYCN amplification, 17q gain, and deletions, in the Russian population is unknown. Objective: The aim is to study the frequency of MYCC and MYCN amplifications, 17q gain, and 17p deletion and determine their prognostic value in Russian patients with MB. Methods. This study was performed on MB cells obtained from 18 patients (12 boys and 6 girls, aged between 3 months and 17 years, with a median age of 6.5 years). Determination of cytogenetic aberrations was carried out using FISH assays with MYCC-SO, MYCN-SO, and MYCN-SG/cen2 probes, as well as cen7/p53 dual color probes and PML/RARα dual color probes (Abbott Molecular, USA). One-way ANOVA and Fisher’s F-test were used to compare the two groups. The differences were considered significant when p < 0.05. Results. In 77.7% of patients (14/18), the classical type of MB was present; in 16.7% (3/18), desmoplastic type; and in 5.6% (1/18), nodular desmoplasic types of neoplasms. Amplification of MYC genes was detected in 22.2% of Russian patients (n = 4 out of 18). Patients with MYC amplification had the worst overall survival (OS: 0% vs. 68%, p = 0.0004). Changes on the 17th chromosome were found in 58.3% of patients. Deletion of 17p occurred in 23.1%, and gain of 17q occurred in 46.2%. There were no significant differences in OS, clinical signs, or the presence of additional 17q material or 17p deletion among patients with MB. Conclusions: Amplification of the MYC gene is a predictor of poor overall survival to therapy and a high risk of metastatic relapse. This allows us to more accurately stratify patients into risk groups in order to determine the intensity and duration of therapy. Full article

Breeding programs often overlook the use of root traits. Therefore, we investigated the relevance of sorghum root traits in explaining its adaptation to combined drought and heat stress (CDHS). Six (i.e., three pre-release lines + three checks) sorghum genotypes were established at two low-altitude (i.e., <600 masl) locations with a long-term history of averagely very high temperatures in the beginning of the summer season, under two management (i.e., CDHS and well-watered (WW)) regimes. At each location, the genotypes were laid out in the field using a randomized complete block design (RCBD) replicated two times. Root trait data, namely root diameter (RD), number of roots (NR), number of root tips (NRT), total root length (TRL), root depth (RDP), root width (RW), width–depth ratio (WDR), root network area (RNA), root solidity (RS), lower root area (LRA), root perimeter (RP), root volume (RV), surface area (SA), root holes (RH) and root angle (RA) were gathered using the RhizoVision Explorer software during the pre- and post-flowering stage of growth. RSA traits differentially showed significant (p < 0.05) correlations with grain yield (GY) at pre- and post-flowering growth stages and under CDHS and WW conditions also revealing genotypic variation estimates exceeding 50% for all the traits. Regression models varied between pre-flowering (p = 0.013, R² = 47.15%, R² Predicted = 29.32%) and post-flowering (p = 0.000, R² = 85.64%, R² Predicted = 73.30%) growth stages, indicating post-flowering as the optimal stage to relate root traits to yield performance. RD contributed most to the regression model at post-flowering, explaining 51.79% of the 85.64% total variation. The Smith–Hazel index identified ICSV111IN and ASAREACA12-3-1 as superior pre-release lines, suitable for commercialization as new varieties. The study demonstrated that root traits (in particular, RD, RW, and RP) are linked to crop performance under CDHS conditions and should be incorporated in breeding programs. This approach may accelerate genetic gains not only in sorghum breeding programs, but for other crops, while offering a nature-based breeding strategy for stress adaptation in crops. Full article

Background: Neurodevelopmental disorders, including autism spectrum disorder (ASD) and attention-deficit/hyperactivity disorder (ADHD), are increasingly recognized as conditions arising from multifaceted interactions among genetic predisposition, environmental exposures, and epigenetic modifications. Among epigenetic mechanisms, non-coding RNAs (ncRNAs), including microRNAs (miRNAs), long non-coding RNAs (lncRNAs), and PIWI-interacting RNAs (piRNAs), have gained attention as pivotal regulators of gene expression during neurodevelopment. These RNA species do not encode proteins but modulate gene expression at transcriptional and post-transcriptional levels, thereby influencing neuronal differentiation, synaptogenesis, and plasticity. Objectives: This systematic review critically examines and synthesizes the most recent findings, particularly in the post-COVID transcriptomic research era, regarding the role of ncRNAs in the pathogenesis, diagnosis, and potential treatment of neurodevelopmental disorders. Methods: A comprehensive literature search was conducted to identify studies reporting on the expression profiles, functional implications, and clinical relevance of ncRNAs in neurodevelopmental disorders, across both human and animal models. Results: Here, we highlight that multiple classes of ncRNAs are differentially expressed in individuals with ASD and ADHD. Notably, specific miRNAs and lncRNAs demonstrate potential as diagnostic biomarkers with high sensitivity and specificity. Functional studies further reveal that ncRNAs actively contribute to pathogenic mechanisms by modulating neuronal gene networks. Conclusions: Emerging experimental data indicate that the exogenous administration of certain ncRNAs may reverse molecular and behavioral phenotypes, supporting their therapeutic promise. These findings broaden our understanding of neurodevelopmental regulation and open new avenues for personalized diagnostics and targeted interventions in clinical neuropsychiatry. Full article

The rise in antibiotic-resistant bacteria has made the management of bacterial diseases increasingly challenging. As a result, bacteriophages have gained attention as a promising alternative to antibiotics for combating bacterial pathogens. However, the usage of phages as biocontrol agents faces many challenges, including environmental stability, delivery efficiency, host specificity, and potential bacterial resistance. Advancements in genetic engineering and nanotechnology have been explored to enhance the stability, efficacy, and adaptability of phage-based treatments. In this review, we discuss the key barriers to the effective implementation of phage therapy and highlight innovative strategies to overcome these challenges. By addressing these limitations, this review aims to provide insights into optimizing phage-based approaches for widespread therapeutic and biocontrol applications. Full article

To address the challenges of model uncertainty, strong nonlinearities, and controller tuning in high-precision trajectory tracking for hydraulic servo systems, this paper proposes a hierarchical GA-PID-MPC fusion strategy. The architecture integrates three functional layers: a Genetic Algorithm (GA) for online parameter optimization, a Model Predictive Controller (MPC) for future-oriented planning, and a Proportional–Integral–Derivative (PID) controller for fast feedback correction. These modules are dynamically coordinated through an adaptive cost-aware blending mechanism based on real-time performance evaluation. The MPC module operates on a linearized state–space model and performs receding-horizon control with weights and horizon length $\theta =[q,r,T_p]$ tuned by GA. In parallel, the PID controller is enhanced with online gain projection to mitigate nonlinear effects. The blending coefficient $\sigma \left(t\right)$ is adaptively updated to balance predictive accuracy and real-time responsiveness, forming a robust single-loop controller. Rigorous theoretical analysis establishes global input-to-state stability and $H_{\infty }$ performance under average dwell-time constraints. Full article

To address the modeling complexity and multi-objective collaborative optimization challenges in multi-depot and multiple unmanned aerial vehicle (UAV) delivery task planning, this paper proposes a bi-layer planning framework, which comprehensively considers resource constraints, multi-depot coordination, and the coupling characteristics of path execution. The novelty of this work lies in the seamless integration of an enhanced genetic algorithm and tailored swarm optimization within a unified two-tier architecture. The upper layer tackles the task assignment problem by formulating a multi-objective optimization model aimed at minimizing economic costs, delivery delays, and the number of UAVs deployed. The Enhanced Non-Dominated Sorting Genetic Algorithm II (ENSGA-II) is developed, incorporating heuristic initialization, goal-oriented search operators, an adaptive mutation mechanism, and a staged evolution control strategy to improve solution feasibility and distribution quality. The main contributions are threefold: (1) a novel ENSGA-II design for efficient and well-distributed task allocation; (2) an improved PSO-based path planner with chaotic initialization and adaptive parameters; and (3) comprehensive validation demonstrating substantial gains over baseline methods. The lower layer addresses the path planning problem by establishing a multi-objective model that considers path length, flight risk, and altitude variation. An improved particle swarm optimization (PSO) algorithm is proposed by integrating chaotic initialization, linearly adjusted acceleration coefficients and maximum velocity, a stochastic disturbance-based position update mechanism, and an adaptively tuned inertia weight to enhance algorithmic performance and path generation quality. Simulation results under typical task scenarios demonstrate that the proposed model achieves an average reduction of 47.8% in economic costs and 71.4% in UAV deployment quantity while significantly reducing delivery window violations. The framework exhibits excellent capability in multi-objective collaborative optimization. The ENSGA-II algorithm outperforms baseline algorithms significantly across performance metrics, achieving a hypervolume (HV) value of 1.0771 (improving by 72.35% to 109.82%) and an average inverted generational distance (IGD) of 0.0295, markedly better than those of comparison algorithms (ranging from 0.0893 to 0.2714). The algorithm also demonstrates overwhelming superiority in the C-metric, indicating outstanding global optimization capability in terms of distribution, convergence, and the diversity of the solution set. Moreover, the proposed framework and algorithm are both effective and feasible, offering a novel approach to low-altitude urban logistics delivery problems. Full article

This study presents a hybrid adaptive control strategy that integrates genetic algorithm (GA) optimization with an adaptive neuro-fuzzy inference system (ANFIS) for precise thermal regulation of single-photon avalanche diodes (SPADs). To address the nonlinear and disturbance-sensitive dynamics of SPAD systems, a performance-oriented dataset is constructed through multi-scenario simulations using settling time, overshoot, and steady-state error as fitness metrics. The genetic algorithm (GA) facilitates broad exploration of the proportional–integral–derivative (PID) controller parameter space while ensuring control stability by discarding low-performing gain combinations. The resulting high-quality dataset is used to train the ANFIS model, enabling real-time, adaptive tuning of PID gains. Simulation results demonstrate that the proposed GA-ANFIS-PID controller significantly enhances dynamic response, robustness, and adaptability over both the conventional Ziegler–Nichols PID and GA-only PID schemes. The controller maintains stability under structural perturbations and abrupt thermal disturbances without the need for offline retuning, owing to the real-time inference capabilities of the ANFIS model. By combining global evolutionary optimization with intelligent online adaptation, this approach improves both accuracy and generalization, offering a practical and scalable solution for SPAD thermal management in demanding environments such as quantum communication, sensing, and single-photon detection platforms. Full article