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14 pages, 6988 KiB  
Article
Effect of Substrate Temperature on the Structural, Morphological, and Infrared Optical Properties of KBr Thin Films
by Teng Xu, Qingyuan Cai, Weibo Duan, Kaixuan Wang, Bojie Jia, Haihan Luo and Dingquan Liu
Materials 2025, 18(15), 3644; https://doi.org/10.3390/ma18153644 (registering DOI) - 3 Aug 2025
Abstract
Potassium bromide (KBr) thin films were deposited by resistive thermal evaporation at substrate temperatures ranging from 50 °C to 250 °C to systematically elucidate the temperature-dependent evolution of their physical properties. Structural, morphological, and optical characteristics were examined by X-ray diffraction (XRD), scanning [...] Read more.
Potassium bromide (KBr) thin films were deposited by resistive thermal evaporation at substrate temperatures ranging from 50 °C to 250 °C to systematically elucidate the temperature-dependent evolution of their physical properties. Structural, morphological, and optical characteristics were examined by X-ray diffraction (XRD), scanning electron microscopy (SEM), atomic force microscopy (AFM), and Fourier transform infrared spectroscopy (FTIR). The results reveal a complex, non-monotonic response to temperature rather than a simple linear trend. As the substrate temperature increases, growth evolves from a mixed polycrystalline texture to a pronounced (200) preferred orientation. Morphological analysis shows that the film surface is smoothest at 150 °C, while the microstructure becomes densest at 200 °C. These structural variations directly modulate the optical constants: the refractive index attains its highest values in the 150–200 °C window, approaching that of bulk KBr. Cryogenic temperature (6 K) FTIR measurements further demonstrate that suppression of multi-phonon absorption markedly enhances the infrared transmittance of the films. Taken together, the data indicate that 150–200 °C constitutes an optimal process window for fabricating KBr films that combine superior crystallinity, low defect density, and high packing density. This study elucidates the temperature-driven structure–property coupling and offers valuable guidance for optimizing high-performance infrared and cryogenic optical components. Full article
(This article belongs to the Special Issue Obtaining and Characterization of New Materials (5th Edition))
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19 pages, 5843 KiB  
Article
Microstructure Evolution in Homogenization Heat Treatment of Inconel 718 Manufactured by Laser Powder Bed Fusion
by Fang Zhang, Yifu Shen and Haiou Yang
Metals 2025, 15(8), 859; https://doi.org/10.3390/met15080859 (registering DOI) - 31 Jul 2025
Viewed by 91
Abstract
This study systematically investigates the homogenization-induced Laves phase dissolution kinetics and recrystallization mechanisms in laser powder bed fusion (L-PBF) processed IN718 superalloy. The as-built material exhibits a characteristic fine dendritic microstructure with interdendritic Laves phase segregation and high dislocation density, featuring directional sub-grain [...] Read more.
This study systematically investigates the homogenization-induced Laves phase dissolution kinetics and recrystallization mechanisms in laser powder bed fusion (L-PBF) processed IN718 superalloy. The as-built material exhibits a characteristic fine dendritic microstructure with interdendritic Laves phase segregation and high dislocation density, featuring directional sub-grain boundaries aligned with the build direction. Laves phase dissolution demonstrates dual-stage kinetics: initial rapid dissolution (0–15 min) governed by bulk atomic diffusion, followed by interface reaction-controlled deceleration (15–60 min) after 1 h at 1150 °C. Complete dissolution of the Laves phase is achieved after 3.7 h at 1150 °C. Recrystallization initiates preferentially at serrated grain boundaries through boundary bulging mechanisms, driven by localized orientation gradients and stored energy differentials. Grain growth kinetics obey a fourth-power time dependence, confirming Ostwald ripening-controlled boundary migration via grain boundary diffusion. Such a study is expected to be helpful in understanding the microstructural development of L-PBF-built IN718 under heat treatments. Full article
(This article belongs to the Section Additive Manufacturing)
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21 pages, 2585 KiB  
Review
Advances of Articulated Tug–Barge Transport in Enhancing Shipping Efficiency
by Plamen Yanakiev, Yordan Garbatov and Petar Georgiev
J. Mar. Sci. Eng. 2025, 13(8), 1451; https://doi.org/10.3390/jmse13081451 - 29 Jul 2025
Viewed by 134
Abstract
Articulated Tugs and Barges (ATBs) are increasingly recognised for their effectiveness in transporting chemicals, petroleum, bulk goods, and containers, primarily due to their exceptional flexibility and fuel efficiency. Recent projections indicate that the ATB market is on track for significant growth, which is [...] Read more.
Articulated Tugs and Barges (ATBs) are increasingly recognised for their effectiveness in transporting chemicals, petroleum, bulk goods, and containers, primarily due to their exceptional flexibility and fuel efficiency. Recent projections indicate that the ATB market is on track for significant growth, which is expected to lead to an increase in the annual growth rate from 2025 to 2032. This study aims to analyse the current advancements in ATB technology and provide insights into the ATB fleet and the systems that connect tugboats and barges. Furthermore, it highlights the advantages of this transportation system, especially regarding its role in enhancing energy efficiency within the maritime transport sector. Currently, there is limited information available in the public domain about ATBs compared to other commercial vessels. The analysis reveals that much of the required information for modern ATB design is not accessible outside specialised design companies. The study also focuses on conceptual design aspects, which include the main dimensions, articulated connections, propulsion systems, and machinery, concluding with an evaluation of economic viability. Special emphasis is placed on defining the main dimensions, which is a critical part of the complex design process. In this context, the ratios of length to beam (L/B), beam to draft (B/D), beam to depth (B/T), draft to depth (T/D), and power to the number of tugs cubed (Pw/N3) are established as design control parameters in the conceptual design phase. This aspect underscores the novelty of the present study. Additionally, the economic viability is analysed in terms of both CAPEX (capital expenditures) and OPEX (operational expenditures). While CAPEX does not significantly differ between the methods used in different types of commercial ships, OPEX should account for the unique characteristics of ATB vessels. Full article
(This article belongs to the Section Ocean Engineering)
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20 pages, 2984 KiB  
Article
Influence of Rice–Crayfish Co-Culture Systems on Soil Properties and Microbial Communities in Paddy Fields
by Dingyu Duan, Dingxuan He, Liangjie Zhao, Chenxi Tan, Donghui Yang, Wende Yan, Guangjun Wang and Xiaoyong Chen
Plants 2025, 14(15), 2320; https://doi.org/10.3390/plants14152320 - 27 Jul 2025
Viewed by 358
Abstract
Integrated rice–crayfish (Oryza sativaProcambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects [...] Read more.
Integrated rice–crayfish (Oryza sativaProcambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects of the RC systems on soil physicochemical characteristics and microbial dynamics in paddy fields of southern Henan Province, China, over the 2023 growing season and subsequent fallow period. Using a randomized complete design, rice monoculture (RM, as the control) and RC treatments were compared across replicated plots. Soil and water samples were collected post-harvest and pre-transplanting to assess soil properties, extracellular enzyme activity, and microbial community structure. Results showed that RC significantly enhanced soil moisture by up to 30.2%, increased soil porosity by 9.6%, and nearly tripled soil organic carbon compared to RM. The RC system consistently elevated nitrogen (N), phosphorus (P), and potassium (K) throughout both the rice growth and fallow stages, indicating improved nutrient availability and retention. Elevated extracellular enzyme activities linked to carbon, N, and P cycling were observed under RC, with enzymatic stoichiometry revealing increased microbial nutrient limitation intensity and a shift toward P limitation. Microbial community composition was significantly altered under RC, showing increased biomass, a higher fungi-to-bacteria ratio, and greater relative abundance of Gram-positive bacteria, reflecting enhanced soil biodiversity and ecosystem resilience. Further analyses using the Mantel test and Random Forest identified extracellular enzyme activities, PLFAs, soil moisture, and bulk density as major factors shaping microbial communities. Redundancy analysis (RDA) confirmed that total potassium (TK), vector length (VL), soil pH, and total nitrogen (TN) were the strongest environmental predictors of microbial variation, jointly explaining 74.57% of the total variation. Our findings indicated that RC improves soil physicochemical conditions and microbial function, thereby supporting sustainable nutrient cycling and offering a promising, environmentally sound strategy for enhancing productivity and soil health in rice-based agro-ecosystems. Full article
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25 pages, 657 KiB  
Article
Deficit Irrigation and Nitrogen Application Rate Influence Growth and Yield of Four Potato Cultivars (Solanum tuberosum L.)
by Abdulssamad M. H. Barka, Samuel Y. C. Essah and Jessica G. Davis
Horticulturae 2025, 11(7), 849; https://doi.org/10.3390/horticulturae11070849 - 18 Jul 2025
Viewed by 255
Abstract
Potatoes have high nitrogen (N) and irrigation requirements. Increasing water scarcity and environmental concerns highlight the need for efficient resource management. This study evaluated the effects of deficit irrigation and reduced N on yield and growth parameters in four potato cultivars (Canela Russet, [...] Read more.
Potatoes have high nitrogen (N) and irrigation requirements. Increasing water scarcity and environmental concerns highlight the need for efficient resource management. This study evaluated the effects of deficit irrigation and reduced N on yield and growth parameters in four potato cultivars (Canela Russet, Mesa Russet, Russet Norkotah3, and Yukon Gold) at Colorado State University’s San Luis Valley Research Center over two growing seasons. Three irrigation levels (~70%, ~80%, and 100% ET replacement) and two N rates (165 and 131 kg/ha) were evaluated. Measurements included total and marketable yield, tuber size distribution, tuber bulking (TB), leaf area index (LAI), and stem and tuber numbers. Yield losses were absent with ≤18% irrigation reduction in Canela Russet, Mesa Russet, or Yukon Gold but occurred with larger deficits. Russet Norkotah3 experienced yield decline with 16–23% reductions in irrigation. A twenty percent reduction in N application had no effect on Mesa Russet or Russet Norkotah3 yields, while the other varieties experienced a yield decline in one out of two years. Early-season LAI and late-season TB were positively correlated with yield, particularly for Canela Russet and Russet Norkotah3. These findings suggest irrigation and N inputs can be reduced without compromising productivity, but reductions must be determined on a cultivar-by-cultivar basis. Full article
(This article belongs to the Special Issue Advances in Sustainable Cultivation of Horticultural Crops)
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18 pages, 1646 KiB  
Article
Initial Analysis of Plant Soil for Evidence of Pathogens Associated with a Disease of Seedling Ocotea monteverdensis
by William D. Eaton, Debra A. Hamilton, Alexander Lemenze and Patricia Soteropoulos
Microorganisms 2025, 13(7), 1682; https://doi.org/10.3390/microorganisms13071682 - 17 Jul 2025
Viewed by 239
Abstract
Seedlings of the ecologically important, critically endangered tree Ocotea monteverdensisis experience high mortality in the Monteverde, Costa Rica, cloud forests at the onset of the wet season, yet there are no studies suggesting the disease etiology. Here, healthy and diseased plant root and [...] Read more.
Seedlings of the ecologically important, critically endangered tree Ocotea monteverdensisis experience high mortality in the Monteverde, Costa Rica, cloud forests at the onset of the wet season, yet there are no studies suggesting the disease etiology. Here, healthy and diseased plant root and bulk soils were analyzed for various carbon and nitrogen (N) metrics and respiration levels, and DNA sequence-based bacterial and fungal community compositions. All nitrogen metric levels were greater in diseased vs. healthy plant root soils, which could enhance pathogen growth and pathogenic mechanisms. Greater DNA percentages from several potential pathogens were found in diseased vs. healthy plant root soils, suggesting this disease may be associated with a root pathogen. The DNA of the fungus Mycosphaerella was at greater levels in diseased vs. healthy plant root soils than other potential pathogens. Mycosphaerella causes similar diseases in other plants, including coffee, after onset of the wet season. The O. monteverdensis disease also occurs in seedlings planted within or near former coffee plantations at wet season onset. Distance-based linear model analyses indicated that NO3 levels best predicted the pattern of fungal pathogens in the soils, and Mycosphaerella and Tremella best predicted the patterns of the different N metrics in the soils, supporting their possible roles in this disease. Full article
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21 pages, 2903 KiB  
Article
Compost Tea Combined with Fungicides Modulates Grapevine Bacteriome and Metabolome to Suppress Downy Mildew
by Giuliano Bonanomi, Giuseppina Iacomino, Ayoub Idbella, Giandomenico Amoroso, Alessia Staropoli, Andrea De Sio, Franco Saccocci, Ahmed M. Abd-ElGawad, Mauro Moreno and Mohamed Idbella
J. Fungi 2025, 11(7), 527; https://doi.org/10.3390/jof11070527 - 16 Jul 2025
Viewed by 297
Abstract
Downy mildew, caused by Plasmopara viticola, is a major threat to grapevine (Vitis vinifera) cultivation in humid climates. Restrictions on synthetic pesticides and inconsistent efficacy of current biocontrol agents, especially under rainy conditions, complicate disease management. This study evaluated the [...] Read more.
Downy mildew, caused by Plasmopara viticola, is a major threat to grapevine (Vitis vinifera) cultivation in humid climates. Restrictions on synthetic pesticides and inconsistent efficacy of current biocontrol agents, especially under rainy conditions, complicate disease management. This study evaluated the potential of compost tea to suppress downy mildew in a two-year field experiment (2023 and 2024), combined with reduced synthetic fungicide applications. The study design compared two phytosanitary management strategies on a commercial vineyard: a conventional fungicide against a compost tea strategy supplemented with two cymoxanil applications. The experiment set up had three replicated blocks, each consisting of 100 plants for a total of 600 plants. Mechanistic insights were provided through controlled laboratory experiments involving pre- and post-infection leaf assays, vineyard bacteriome profiling, via 16S rRNA gene sequencing for bacterial communities, across vineyard compartments, i.e., bulk soil, rhizosphere, and phyllosphere, and grapevine metabolomic analysis by GC-MS analysis. Field trials demonstrated that compost tea combined with two fungicide applications effectively reduced disease severity, notably outperforming the fungicide alone in the particularly rainy year of 2023. Bacteriome analysis revealed that compost tea treatment enriched beneficial bacterial genera, including Pseudomonas, Sphingomonas, Enterobacter, Massilia, and Bacillus, known for their growth-promoting and biocontrol activity in the rhizosphere and phyllosphere. Laboratory assays on detached leaves further showed that compost tea alone could suppress both infection and sporulation of P. viticola. Metabolomic analysis highlighted the accumulation of compounds such as tartaric and shikimic acids in compost tea treated leaves, suggesting a potential role in induced resistance. The findings indicate that applying compost tea with reduced fungicide treatments represents a promising and sustainable strategy for managing grapevine downy mildew, even in challenging climates. Full article
(This article belongs to the Special Issue Biological Control of Fungal Plant Pathogens)
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17 pages, 12539 KiB  
Article
TGF-β Promotes Endothelial-to-Mesenchymal Transition and Alters Corneal Endothelial Cell Migration in Fuchs Endothelial Corneal Dystrophy
by Judy Yan, Brooke Lim, Narisa Dhupar, Kathrine Bhargava, Lina Chen, Greg Moloney and Stephan Ong Tone
Int. J. Mol. Sci. 2025, 26(14), 6685; https://doi.org/10.3390/ijms26146685 - 11 Jul 2025
Viewed by 281
Abstract
Fuchs endothelial corneal dystrophy (FECD) is a progressive corneal disease characterized by corneal endothelial cell (CEC) loss and guttae formation. Elevated levels of Transforming Growth Factor-Beta 1 and 2 (TGF-β1/-β2) have been reported in the aqueous humor (AH) of FECD patients and have [...] Read more.
Fuchs endothelial corneal dystrophy (FECD) is a progressive corneal disease characterized by corneal endothelial cell (CEC) loss and guttae formation. Elevated levels of Transforming Growth Factor-Beta 1 and 2 (TGF-β1/-β2) have been reported in the aqueous humor (AH) of FECD patients and have been implicated with abnormal extracellular matrix (ECM) production, endothelial-to-mesenchymal transition (EndoMT), the unfolded protein response, and cell death. However, how TGF-β signaling affects cell migration in FECD remains to be elucidated. In this study, we found that TGF-β2 levels were significantly elevated in the AH of FECD patients compared to controls. We performed bulk RNA sequencing on FECD CECs treated with TGF-β1 or TGF-β2 and identified the epithelial-to-mesenchymal (EMT) pathway as one of the top dysregulated pathways. We found that TGF-β1 and TGF-β2 increased EMT markers, filamentous-actin (F-actin) expression and produced more EMT-like phenotype in FECD and control CECs. We also observed that TGF-β1 and TGF-β2 significantly increased FECD CEC migration speed as detected by scratch assay and individual cell tracking and promoted individual cellular migration behavior. This study provides novel insight into FECD pathogenesis and how increased TGF-β signaling promotes EndoMT and alters cellular migration in FECD CECs. Full article
(This article belongs to the Special Issue Functional Roles of Epithelial and Endothelial Cells)
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17 pages, 1420 KiB  
Article
Molecular Response of Bacteria Exposed to Wastewater-Borne Nanoparticles
by Nina Doskocz, Katarzyna Affek and Monika Załęska-Radziwiłł
Appl. Sci. 2025, 15(14), 7746; https://doi.org/10.3390/app15147746 - 10 Jul 2025
Viewed by 201
Abstract
The increasing release of nanoparticles into aquatic environments, particularly via wastewater, raises concerns about their biological effects on microbial communities. This study investigated the molecular response of Pseudomonas putida to aluminum oxide nanoparticles (Al2O3NPs) under controlled conditions and in [...] Read more.
The increasing release of nanoparticles into aquatic environments, particularly via wastewater, raises concerns about their biological effects on microbial communities. This study investigated the molecular response of Pseudomonas putida to aluminum oxide nanoparticles (Al2O3NPs) under controlled conditions and in synthetic wastewater, both before and after biological treatment. Acute toxicity was evaluated using growth inhibition assays, while the expression of katE, ahpC, and ctaD—genes associated with oxidative stress and energy metabolism—was quantified via RT-qPCR. Exposure to pristine Al2O3NPs induced a strong, time-dependent upregulation of all tested genes (e.g., katE and ahpC up to 4.5-fold). In untreated wastewater, this effect persisted but at a lower intensity; bulk Al2O3 caused only moderate changes. Treated wastewater samples showed markedly reduced gene expression, indicating partial detoxification. Nanoparticles elicited stronger biological responses than their bulk counterparts, confirming the material form-specific effects. Comparative analysis with Daphnia magna revealed similar patterns of oxidative stress gene activation. These findings highlight the influence of nanoparticle form and environmental matrix on microbial responses and support the use of gene expression analysis as a sensitive biomarker for nanoparticle-induced stress in environmental risk assessment. Full article
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17 pages, 3466 KiB  
Article
Levelized Cost of Storage (LCOS) of Battery Energy Storage Systems (BESS) Deployed for Photovoltaic Curtailment Mitigation
by Luca Migliari, Daniele Cocco and Mario Petrollese
Energies 2025, 18(14), 3602; https://doi.org/10.3390/en18143602 - 8 Jul 2025
Cited by 1 | Viewed by 495
Abstract
Despite the growing application of storage for curtailment mitigation, its cost-effectiveness remains uncertain. This study evaluates the Levelized Cost of Storage, which also represents an implicit threshold revenue, for Lithium-ion Battery Energy Storage Systems deployed for photovoltaic curtailment mitigation. Specifically, the LCOS is [...] Read more.
Despite the growing application of storage for curtailment mitigation, its cost-effectiveness remains uncertain. This study evaluates the Levelized Cost of Storage, which also represents an implicit threshold revenue, for Lithium-ion Battery Energy Storage Systems deployed for photovoltaic curtailment mitigation. Specifically, the LCOS is assessed—using a mathematical simulation model—for various curtailment scenarios defined by maximum levels (10–40%), hourly profiles (upper limit and proportional), and growth rates (2, 5, and 10 years) at three storage system capacities (0.33, 0.50, 0.67 h) and two European locations (Cagliari and Berlin). The results indicate that the LCOS of batteries deployed for curtailment mitigation is, on average, comparable to that of systems used for bulk energy storage applications (155–320 EUR/MWh) in Cagliari (180–410 EUR/MWh). In contrast, in Berlin, the lower and more variable photovoltaic generation results in significantly higher LCOS values (200–750 EUR/MWh). For both locations, the lowest LCOS values (180 EUR/MWh for Cagliari and 200 EUR/MWh for Berlin), obtained for very high curtailment levels (40%), are significantly above average electricity prices (108 EUR/MWh for Cagliari and 78 EUR/MWh for Berlin), suggesting that BESSs for curtailment mitigation are competitive in the day-ahead market only if their electricity is sold at a significantly higher price. This is particularly true for lower curtailment levels. Indeed, for a curtailment level of 10% reached in 5 years, the LCOS for a 0.5 h BESS capacity is approximately 255 EUR/MWh in Cagliari and 460 EUR/MWh in Berlin. The study further highlights that the curtailment scenario significantly affects the Levelized Cost of Storage, with the upper limit hourly profile being more conservative. Full article
(This article belongs to the Special Issue Advanced Solar Technologies and Thermal Energy Storage)
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19 pages, 7489 KiB  
Article
Biochar-Coconut Shell Mixtures as Substrates for Phalaenopsis ‘Big Chili’
by Yun Pan, Daoyuan Chen, Yan Deng, Shunshun Wang, Feng Chen, Fei Wang, Luyu Xue, Yanru Duan, Yunxiao Guan, Jinliao Chen, Xiaotong Ji and Donghui Peng
Plants 2025, 14(14), 2092; https://doi.org/10.3390/plants14142092 - 8 Jul 2025
Viewed by 385
Abstract
Phalaenopsis is a widely cultivated ornamental plant of considerable economic value worldwide. However, traditional growing medium, sphagnum moss, is limited and non-renewable. It also decomposes slowly and is prone to environmental issues. Therefore, there is an urgent need to identify more environmentally friendly [...] Read more.
Phalaenopsis is a widely cultivated ornamental plant of considerable economic value worldwide. However, traditional growing medium, sphagnum moss, is limited and non-renewable. It also decomposes slowly and is prone to environmental issues. Therefore, there is an urgent need to identify more environmentally friendly and efficient alternatives. Biochar, a sustainable material with excellent physical and chemical properties, has been recognized as an effective promoter of plant growth. In this study, we investigated the influence of biochar derived from three raw materials (corn straw, bamboo, and walnut) mixed1 with coconut shell at ratios of 1:2, 1:10, and 4:1, on the growth of Phalaenopsis ‘Big Chili’. Over a 150-day controlled experiment, we evaluated multiple growth parameters, including plant height, crown width, total root length, total projected area, total surface area, and root volume. Compared to the traditional growing medium, the optimal biochar-coconut shell mixture (maize straw biochar: coconut shell = 1:2) increased plant height and crown width by 7.55% and 6.68%, respectively. Root metrics improved substantially, with total root length increasing by 10.96%, total projected area by 22.82%, total surface area by 22.14%, and root volume by 38.49%. Root biomass in the optimal treatment group increased by 42.47%, while aboveground and belowground dry weights increased by 6.16% and 77.11%, respectively. These improvements were closely associated with favorable substrate characteristics, including low bulk density, high total and water-holding porosity, moderate aeration, and adequate nutrient availability. These findings demonstrate that substrate characteristics critically influence plant performance and that biochar–coconut shell mixtures, particularly at a 1:2 ratio, represent a viable and sustainable alternative to sphagnum moss for commercial cultivation of Phalaenopsis. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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12 pages, 6934 KiB  
Article
Segmentation of Plant Roots and Soil Constituents Through X-Ray Computed Tomography and Image Analysis to Reveal Plant Root Impacts on Soil Structure
by Yuki Kojima, Takeru Toda, Shoichiro Hamamoto, Yutaka Ohtake and Kohji Kamiya
Agriculture 2025, 15(13), 1437; https://doi.org/10.3390/agriculture15131437 - 3 Jul 2025
Viewed by 288
Abstract
Plant roots influence various soil physical properties by altering the soil structure and pore configuration; however, a detailed understanding of these effects remains limited. In this study, we applied a relatively simple approach for segmenting plant roots and soil constituents using X-ray computed [...] Read more.
Plant roots influence various soil physical properties by altering the soil structure and pore configuration; however, a detailed understanding of these effects remains limited. In this study, we applied a relatively simple approach for segmenting plant roots and soil constituents using X-ray computed tomography (CT) images to evaluate root-induced changes in soil structure. The method combines manual initialization with a layer-wise automated region-growing approach, enabling the extraction of the root systems of soybean, Italian ryegrass, and Guinea grass. The method utilizes freely available software with a simple interface and does not require advanced image analysis skills, making it accessible to a wide range of researchers. The soil particles, pore water, and pore air were segmented using a Kriging-based thresholding technique. The segmented four-phase images allowed for the quantification of the volume fractions of soil constituents, pore size distributions, and coordination numbers. Furthermore, by separating the rhizosphere and bulk soil, we found that the root presence significantly reduced solid fractions and increased water content, particularly in the upper soil layers. Macropores and fine pores were observed near the roots, highlighting the complex structural impacts of root growth. While further validation is needed to assess the method’s applicability across different soil types and imaging conditions, it provides a practical basis for visualizing and quantifying root–soil interactions, and could contribute to advancing our understanding of how plant roots influence key soil hydraulic and thermal properties. Full article
(This article belongs to the Section Agricultural Soils)
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26 pages, 8710 KiB  
Article
MOFs—Combining Fully Synthetic Injectable Hydrogel Scaffolds Exhibiting Higher Skeletal Muscle Regenerative Efficiency than Matrigel
by Sobuj Shahidul Islam, Tatsuya Dode, Soma Kawashima, Myu Fukuoka, Takaaki Tsuruoka and Koji Nagahama
Gels 2025, 11(7), 514; https://doi.org/10.3390/gels11070514 - 2 Jul 2025
Viewed by 393
Abstract
Due to its sarcoma-derived origin and the associated carcinogenic risks, as well as its lack of tissue-specific extracellular matrix biochemical cues, the use of the injectable gel scaffold Matrigel is generally restricted to research applications. Therefore, the development of new fully synthetic injectable [...] Read more.
Due to its sarcoma-derived origin and the associated carcinogenic risks, as well as its lack of tissue-specific extracellular matrix biochemical cues, the use of the injectable gel scaffold Matrigel is generally restricted to research applications. Therefore, the development of new fully synthetic injectable gel scaffolds that exhibit performance comparable to Matrigel is a high priority. In this study, we developed a novel fully synthetic injectable gel scaffold by combining a biodegradable PLGA-PEG-PLGA copolymer, clay nanoparticle LAPONITE®, and L-arginine-loaded metal–organic frameworks (NU-1000) at the nano level. An aqueous solution of the developed hybrid scaffold (PLGA-PEG-PLGA/LAPONITE®/L-Arg@NU-1000) exhibited rapid sol–gel transition at body temperature following simple injection and formed a continuous bulk-sized gel, demonstrating good injectability. Long-term sustained slow release of L-arginine from the resultant gels can be achieved because NU-1000 is a suitable reservoir for L-arginine. PLGA-PEG-PLGA/LAPONITE®/L-Arg@NU-1000 hybrid gels exhibited good compatibility with and promoted the growth of human skeletal muscle satellite cells. Importantly, in vivo experiments using skeletal muscle injury model mice demonstrated that the tissue regeneration efficiency of PLGA-PEG-PLGA/LAPONITE®/L-Arg@NU-1000 gels is higher than that of Matrigel. Specifically, we judged the higher tissue regeneration efficacy of our gels by histological analysis, including MYH3 immunofluorescent staining, H&E staining, and Masson’s trichrome staining. Taken together, these data suggest that novel hybrid hydrogels could serve as injectable hydrogel scaffolds for in vivo tissue engineering and ultimately replace Matrigel. Full article
(This article belongs to the Section Gel Applications)
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21 pages, 30238 KiB  
Article
Transcriptome- and Metabolome-Based Regulation of Growth, Development, and Bioactive Compounds in Salvia miltiorrhiza (Lamiaceae) Seedlings by Different Phosphorus Levels
by Kewei Zuo, Lingxing Chen, Tian Li, Shuang Liu and Chenlu Zhang
Int. J. Mol. Sci. 2025, 26(13), 6253; https://doi.org/10.3390/ijms26136253 - 28 Jun 2025
Cited by 1 | Viewed by 313
Abstract
Phosphorus (P), as one of the essential bulk elements for plant growth and development, plays an important role in root growth, accumulation of secondary metabolites, and regulation of gene expression. In Salvia miltiorrhiza Bunge (S. miltiorrhiza), an important medicinal plant, the [...] Read more.
Phosphorus (P), as one of the essential bulk elements for plant growth and development, plays an important role in root growth, accumulation of secondary metabolites, and regulation of gene expression. In Salvia miltiorrhiza Bunge (S. miltiorrhiza), an important medicinal plant, the accumulation of its active components is closely related to the level of phosphorus supply, but the molecular regulatory mechanism of phosphorus treatment in the growth and secondary metabolism of S. miltiorrhiza is not clear. In this study, we investigated the effects of low phosphorus (P2), moderate phosphorus (P4), and high phosphorus (P6) treatment on the growth and development of S. miltiorrhiza. seedlings, the accumulation of bioactive compounds, and their transcriptional regulation using transcriptomic and metabolomic analyses, and identified the key regulatory genes in the biosynthesis pathways of tanshinone and salvianolic acid. The findings revealed that S. miltiorrhiza biomass exhibited a “peaked” response to phosphorus concentration, peaking at 0.625 mmol·L−1. At this optimal concentration, all four batches achieved maximum root length, root weight, and leaf weight: Batch I (11.3 cm, 2.34 g, 1.62 g), Batch II (12.7 cm, 2.67 g, 1.89 g), Batch III (13.8 cm, 2.85 g, 2.04 g), and Batch IV (15.6 cm, 3.51 g, 2.44 g). Both lower and higher concentrations resulted in growth inhibition and reduced bioactive compound accumulation. Transcription factors associated with root growth and development included bHLH, MYB, and WRKY; in particular, the bZIP23 transcription factor was highly expressed under abnormal phosphorus supply conditions. In addition, the biosynthetic pathways of tanshinone and salvianolic acid were elucidated, and key genes related to the synthesis pathways (CPS, KSL, CYP, PAL, HPPR, and RAS) were identified. The expression of several TFs (such as SmCPS1, SmCYP76AH3, SmCYP76AH1, SmGGPPS1, and SmRAS1) was found to be correlated with tanshinone and salvianolic acid synthesis. The present study provides a theoretical basis for further revealing the molecular mechanism of phosphorus regulation of growth, development, and secondary metabolism of S. miltiorrhiza and provides potential targets for efficient cultivation and molecular breeding of S. miltiorrhiza. Full article
(This article belongs to the Section Molecular Plant Sciences)
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25 pages, 3930 KiB  
Article
Influence of Titanium Dioxide (TiO2) Nanocrystallinity on the Optoelectrical Properties of Chitosan Biocomposite Films Prepared via Sol–Gel Casting
by Nuchnapa Tangboriboon, Nitchakarn Malichai and Guytawan Wantaha
J. Compos. Sci. 2025, 9(7), 334; https://doi.org/10.3390/jcs9070334 - 27 Jun 2025
Viewed by 704
Abstract
Bio-nanocomposite films were prepared using chitosan, gelatin, and varying concentrations (0, 0.5, 1.0, 2.0, and 5.0 wt%) of titanium dioxide (TiO2) nanoparticles in acetic acid via a casting method. The incorporation of TiO2 nanoparticles into the bio-chitosan matrix enhanced ultraviolet [...] Read more.
Bio-nanocomposite films were prepared using chitosan, gelatin, and varying concentrations (0, 0.5, 1.0, 2.0, and 5.0 wt%) of titanium dioxide (TiO2) nanoparticles in acetic acid via a casting method. The incorporation of TiO2 nanoparticles into the bio-chitosan matrix enhanced ultraviolet (UV) absorption and improved the films’ physical, mechanical, and electrical properties. Additionally, the TiO2-loaded films exhibited antimicrobial activity, contributing to the extended preservation of packaged products by inhibiting microbial growth. Notably, the bio-nanocomposite films containing 1.0 wt% TiO2 exhibited an electroactive response, bending under relatively low electric field strength (250 V/mm), whereas the control film without TiO2 required higher field strength (550 V/mm) to achieve bending. This indicates potential applications in electroactive actuators requiring precise movement control. Among the tested concentrations, films containing 0.5 wt% and 1.0 wt% TiO2 (Formulas 7 and 8) demonstrated optimal performance. These films presented a visually appealing appearance with no tear marks, low bulk density (0.91 ± 0.04 and 0.85 ± 0.18 g/cm3), a satisfactory electromechanical response at 250 V/m (17.85 ± 2.58 and 61.48 ± 6.97), low shrinkage percentages (59.95 ± 3.59 and 54.17 ± 9.28), high dielectric constant (1.80 ± 0.07 and 8.10 ± 0.73), and superior UV absorption compared with pure bio-chitosan films, without and with gelatin (Formulas 1 and 6). Full article
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