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26 pages, 2202 KB  
Article
Deep Learning-Based Image Steganography with Latent Space Embedding and Smart Decoder Selection
by Yiqiao Zhou, Na Wang, Xiaolong Hong, Yanchun Peng and Shuo Shao
Entropy 2025, 27(12), 1223; https://doi.org/10.3390/e27121223 - 2 Dec 2025
Viewed by 554
Abstract
Image steganography is crucial for secure communication, enabling covert data embedding within cover images. While traditional methods such as LSB embedding are vulnerable to detection, deep learning techniques like GANs and autoencoders have improved performance, yet they still struggle with dynamic adaptation to [...] Read more.
Image steganography is crucial for secure communication, enabling covert data embedding within cover images. While traditional methods such as LSB embedding are vulnerable to detection, deep learning techniques like GANs and autoencoders have improved performance, yet they still struggle with dynamic adaptation to diverse secret data types, limited training datasets, and resilience to distortions. To address these issues, we propose a flexible framework with adaptive multi-encoder–decoder pairs, extensive dataset training, and an optimized architecture with specialized components. Our model achieves significant improvements in Secret Recovery Accuracy (SRA), Stego-Image Quality (SSIM, PSNR), and robustness to noise, with SSIM of 0.99 and recovery accuracy over 98%. It also reduces the detection rate, with an AUC approaching 0.5 in steganalysis. These results set a new benchmark for secure image transmission and privacy-preserving communication. Full article
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13 pages, 2203 KB  
Article
Design Considerations for a 120 GHz MIMO Sparse Radar Array Based on SISO Integrated Circuits
by Luigi Ferro, Changzhi Li and Emanuele Cardillo
Sensors 2025, 25(18), 5622; https://doi.org/10.3390/s25185622 - 9 Sep 2025
Viewed by 1173
Abstract
This study aims to illustrate the main aspects of designing a modular 120 GHz Multiple-Input Multiple-Output (MIMO) sparse radar array (SRA) composed of multiple Single-Input Single-Output (SISO) Integrated Circuits (ICs). Although the scientific literature reports on 120 GHz integrated circuit prototypes, to the [...] Read more.
This study aims to illustrate the main aspects of designing a modular 120 GHz Multiple-Input Multiple-Output (MIMO) sparse radar array (SRA) composed of multiple Single-Input Single-Output (SISO) Integrated Circuits (ICs). Although the scientific literature reports on 120 GHz integrated circuit prototypes, to the authors’ best knowledge, there are no commercial MIMO radars composed of multiple SISO ICs operating in the D-band spectrum. The design involves many challenges; indeed, the necessity to combine multiple chips with fixed dimensions and the presence of transmitting and receiving antennas on chips add many constraints for the antenna placement and, consequently, for the virtual array design. As an example, the minimum distance between the antennas must be at least equal to the chip width, which is in turn higher than half a wavelength and renders the array into a sparse configuration, thus raising many concerns regarding fixing the optimum inter-chip distance. Thus, this contribution can be considered as pioneering, being focused on the emerging concept of designing D-band MIMO radars by exploiting a modular approach. Full article
(This article belongs to the Special Issue Microwave/MM-Wave Components for Communications and Sensors)
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20 pages, 3774 KB  
Article
Establishing Leaf Tissue Nutrient Standards and Documenting Nutrient Disorder Symptomology of Greenhouse-Grown Cilantro (Coriandrum sativum)
by Danielle Clade, Patrick Veazie, Jennifer Boldt, Kristin Hicks, Christopher Currey, Nicholas Flax, Kellie Walters and Brian Whipker
Appl. Sci. 2025, 15(17), 9266; https://doi.org/10.3390/app15179266 - 22 Aug 2025
Viewed by 1068
Abstract
Cilantro (Coriandrum sativum L.) is a popular annual culinary herb grown for its leaves or seeds. With the increase in hydroponic herb production in controlled environments, a need exists for leaf tissue nutrient standards specific to this production system. The objective of [...] Read more.
Cilantro (Coriandrum sativum L.) is a popular annual culinary herb grown for its leaves or seeds. With the increase in hydroponic herb production in controlled environments, a need exists for leaf tissue nutrient standards specific to this production system. The objective of this study was to develop comprehensive foliar mineral nutrient interpretation ranges for greenhouse-grown cilantro. Cilantro plants were grown in a hydroponic sand culture system to induce and document nutritional disorders. Plants were supplied with a modified Hoagland’s solution, which was adjusted to individually add or omit one nutrient per treatment while holding all others constant. Deficiency and toxicity symptoms were photographed, after which the plant tissue was collected to determine plant dry weight and critical tissue nutrient concentrations. Nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), sulfur (S), boron (B), iron (Fe), and zinc (Zn) deficiencies, as well as B toxicity, were induced. Deficiencies of copper (Cu), manganese (Mn), and molybdenum (Mo) were not observed during the experiment. Additional foliar tissue analysis data (n = 463) were compiled to create nutrient interpretation ranges for 12 essential elements based on a hybrid meta-analysis Sufficiency Range Approach (SRA). This approach defines ranges for deficient, low, sufficient, high, and excessive values. For each element, the optimal distribution was selected according to the lowest Bayesian Information Criterion (BIC) value. A Normal distribution best represented K and S. A Gamma distribution best represented P, Ca, Mn, and Mo, whereas a Weibull distribution best represented N, Mg, B, Cu, Fe, and Zn. These interpretation ranges, along with descriptions of typical symptomology and critical tissue nutrient concentrations, provide useful tools for both diagnosing nutritional disorders and interpreting foliar nutrient analysis results of greenhouse-grown cilantro. Full article
(This article belongs to the Special Issue Crop Yield and Nutrient Use Efficiency)
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16 pages, 1540 KB  
Article
Feature Selection Strategies for Deep Learning-Based Classification in Ultra-High-Dimensional Genomic Data
by Krzysztof Kotlarz, Dawid Słomian, Weronika Zawadzka and Joanna Szyda
Int. J. Mol. Sci. 2025, 26(16), 7961; https://doi.org/10.3390/ijms26167961 - 18 Aug 2025
Viewed by 1107
Abstract
The advancement of high-throughput sequencing has revolutionised genomic research by generating large amounts of data. However, Whole-Genome Sequencing is associated with a statistical challenge known as the p >> n problem. We classified 1825 individuals into five breeds based on 11,915,233 SNPs. First, [...] Read more.
The advancement of high-throughput sequencing has revolutionised genomic research by generating large amounts of data. However, Whole-Genome Sequencing is associated with a statistical challenge known as the p >> n problem. We classified 1825 individuals into five breeds based on 11,915,233 SNPs. First, three feature selection algorithms were applied: SNP-tagging and two approaches based on supervised rank aggregation, followed by either one-dimensional (1D-SRA) or multidimensional (MD-SRA) feature clustering. Individuals were then classified into breeds using a deep learning classifier composed of Convolutional Neural Networks. SNPs selected by SNP-tagging yielded the least satisfactory F1-score (86.87%); however, this approach offered rapid computing time. The 1D-SRA was less suitable for ultra-high-dimensional data due to computational, memory, and storage limitations. However, the SNP set selected by this algorithm provided the best classification quality (96.81%). MD-SRA provided a good balance between classification quality (95.12%) and computational efficiency (17x lower analysis time, 14x lower data storage). Unlike SNP-tagging, SRA-based approaches are universal and are not limited to genomic data. This study addressed the demand for efficient computational and statistical tools for feature selection in high-dimensional genomic data. The results demonstrate that the proposed MD-SRA is suitable for the classification of high-dimensional data. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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19 pages, 7130 KB  
Article
Modification Effects and Mechanism of Cement Paste Wrapping on Sulfate-Containing Recycled Aggregate
by Xiancui Yan, Wen Chen, Zimo He, Hui Liu, Shengbang Xu, Shulin Lu, Minqi Hua and Xinjie Wang
Materials 2025, 18(15), 3617; https://doi.org/10.3390/ma18153617 - 31 Jul 2025
Viewed by 586
Abstract
The utilization of recycled concrete aggregate presents an effective solution for construction waste mitigation. However, concrete service in sulfate environments leads to sulfate ion retention in recycled aggregates, substantially impairing their quality and requiring modification approaches. A critical question remains whether traditional recycled [...] Read more.
The utilization of recycled concrete aggregate presents an effective solution for construction waste mitigation. However, concrete service in sulfate environments leads to sulfate ion retention in recycled aggregates, substantially impairing their quality and requiring modification approaches. A critical question remains whether traditional recycled aggregate modification techniques can effectively enhance the performance of these sulfate-containing recycled aggregates (SRA). Cement paste wrapping in various proportions was used in this investigation to enhance SRA. The performance of both SRA and modified aggregates was systematically assessed through measurements of apparent density, water absorption, crushing value, and microhardness. Microstructural analysis of the cement wrapping modification mechanism was conducted by scanning electron microscopy coupled with mercury intrusion porosimetry. Results revealed that internal sulfate addition decreased the crushing value and increased the water absorption of recycled aggregates, primarily due to micro-cracks formed by expansion. Additionally, the pores were occupied by erosion products, leading to a slight increase in the apparent density of aggregates. The performance of SRA was effectively enhanced by cement paste wrapping at a 0.6 water–binder ratio, whereas it was negatively impacted by a ratio of 1.0. The modifying effect became even more effective when 15% fly ash was added to the wrapping paste. Scanning electron microscopy observations revealed that the interface of SRA was predominantly composed of gypsum crystals. Cement paste wrapping greatly enhanced the original interface structure, despite a new dense interface formed in the modified aggregates. Full article
(This article belongs to the Special Issue Research on Alkali-Activated Materials (Second Edition))
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26 pages, 1431 KB  
Review
Bridging the Regulatory Divide: A Dual-Pathway Framework Using SRA Approvals and AI Evaluation to Ensure Drug Quality in Developing Countries
by Sarfaraz K. Niazi
Pharmaceuticals 2025, 18(7), 1024; https://doi.org/10.3390/ph18071024 - 10 Jul 2025
Cited by 1 | Viewed by 1953
Abstract
Background: Developing countries face significant challenges in accessing high-quality pharmaceutical products due to resource constraints, limited regulatory capacity, and market dynamics that often prioritize cost over quality. This review addresses the critical gap in regulatory frameworks that fail to ensure pharmaceutical quality equity [...] Read more.
Background: Developing countries face significant challenges in accessing high-quality pharmaceutical products due to resource constraints, limited regulatory capacity, and market dynamics that often prioritize cost over quality. This review addresses the critical gap in regulatory frameworks that fail to ensure pharmaceutical quality equity between developed and developing nations. Objective: This comprehensive review examines a novel dual-pathway regulatory framework that leverages stringent regulatory authority (SRA) approvals, artificial intelligence-based evaluation systems, and harmonized pricing mechanisms to ensure pharmaceutical quality equity across global markets. Methods: A comprehensive systematic analysis of current regulatory challenges, proposed solutions, and implementation strategies was conducted through an extensive literature review (202 sources, 2019–2025), expert consultation on regulatory science, AI implementation in healthcare, and pharmaceutical policy development. The methodology included an analysis of regulatory precedents, an economic impact assessment, and a feasibility evaluation based on existing technological implementations. Results: The proposed framework addresses key regulatory capacity gaps through two complementary pathways: Pathway 1 enables same-batch distribution from SRA-approved products with pricing parity mechanisms. At the same time, Pathway 2 provides independent evaluation using AI-enhanced systems for differentiated products. Key components include indigenous AI development, which requires systematic implementation over 4–6 years across three distinct stages, outsourced auditing frameworks that reduce costs by 40–50%, and quality-first principles that categorically reject cost-based quality compromises. Implementation analysis demonstrates a potential for achieving a 90–95% quality standardization, accompanied by a 200–300% increase in regulatory evaluation capability. Conclusions: This framework has the potential to significantly improve pharmaceutical quality and access in developing countries while maintaining rigorous safety and efficacy standards through innovative regulatory approaches. The evidence demonstrates substantial public health benefits with projected improvements in population access (85–95% coverage), treatment success rates (90–95% efficacy), and economic benefits (USD 15–30 billion in system efficiencies), providing a compelling case for implementation that aligns with global scientific consensus and Sustainable Development Goal 3.8. Full article
(This article belongs to the Section Medicinal Chemistry)
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27 pages, 10347 KB  
Article
Quantitative Risk Analysis Framework for Cost and Time Estimation in Road Infrastructure Projects
by Victor Andre Ariza Flores and Gerber Zavala Ascaño
Infrastructures 2025, 10(6), 139; https://doi.org/10.3390/infrastructures10060139 - 5 Jun 2025
Cited by 4 | Viewed by 3529
Abstract
Inaccurate cost and schedule estimations in road infrastructure projects continue to be a critical source of contractual disputes and financial inefficiencies, particularly in developing countries. While quantitative risk analysis (QRA) methods such as Monte Carlo simulation (MCS) and schedule risk analysis (SRA) are [...] Read more.
Inaccurate cost and schedule estimations in road infrastructure projects continue to be a critical source of contractual disputes and financial inefficiencies, particularly in developing countries. While quantitative risk analysis (QRA) methods such as Monte Carlo simulation (MCS) and schedule risk analysis (SRA) are well-established in the literature, their practical adoption remains limited in contexts with low technical capacity and limited access to advanced modeling tools. This study addresses this gap by proposing a practical and accessible quantitative risk analysis framework tailored to the needs of professionals with limited expertise in probabilistic techniques. The framework combines MCS and SRA using probability distributions (PERT, triangular, and normal) and was empirically validated through three road projects in Peru. Results indicated substantial reductions in uncertainty, achieving cost contingency estimates between 1.34% and 11% which were significantly lower than documented overruns of up to 32.29%. Schedule contingencies ranged from 28.71% to 91.67%, markedly improving accuracy. The novelty of this research lies in its context-adapted implementation strategy, offering a robust and easily replicable approach for similar infrastructure environments in Latin America and beyond. This contribution bridges the gap between theoretical risk modeling and its practical adoption, thus enhancing the reliability of infrastructure planning under resource-constrained conditions. Full article
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9 pages, 1399 KB  
Brief Report
Facilitating Cross-border Viral Sequencing Through Nucleic Acid Sample Transport Using Dry Cards
by Lili Wang, Qikai Yin, Alie Brima Tia, Fengyu Tian, Liping Gao, Kai Nie, Kang Xiao, Xuejun Ma, Xiaoping Dong, Doris Harding, Xiaozhou He and George F. Gao
Viruses 2025, 17(6), 804; https://doi.org/10.3390/v17060804 - 31 May 2025
Viewed by 806
Abstract
(1) Background: A safe and effective nucleic acid sample transportation method was developed that is suitable for underdeveloped areas which lack advanced sequencing capabilities, specifically for virus genomic sequencing and infectious disease monitoring. (2) Methods: This study evaluated the use of Flinders Technology [...] Read more.
(1) Background: A safe and effective nucleic acid sample transportation method was developed that is suitable for underdeveloped areas which lack advanced sequencing capabilities, specifically for virus genomic sequencing and infectious disease monitoring. (2) Methods: This study evaluated the use of Flinders Technology Associates (FTA) cards for transporting amplified whole-genome DNA from 120 SARS-CoV-2-positive nasopharyngeal swab samples in Sierra Leone. Nucleic acid extraction and whole-genome amplification were conducted at a local laboratory. Amplified products were applied to FTA Elute cards for room temperature shipment to China CDC for elution and sequencing. (3) Results: The FTA card method achieved a 9.6% recovery rate for amplicons, sufficient for viral genome sequencing. In total, 86 (71.7%) high-quality SRAS-CoV-2 genomic sequences were obtained, with the majority reaching depths exceeding 100X. Sequence analysis revealed co-circulation of Delta, Omicron, and B.1 lineages. Higher Ct values in the original sample significantly reduced coverage and depth, with Ct ≤ 27; 73.6% of samples yielded effective sequences. (4) Conclusions: Transportation of amplified nucleic acid samples using FTA cards enables virus genomic sequencing in resource-limited areas. This approach can potentially improve local virus surveillance and outbreak response capabilities. Further optimizations could improve sequence recovery rate. Implementing this method could significantly enhance sequencing accessibility in underdeveloped regions. Full article
(This article belongs to the Section Coronaviruses)
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16 pages, 2280 KB  
Article
Exploring AI-Driven Machine Learning Approaches for Optimal Classification of Peri-Implantitis Based on Oral Microbiome Data: A Feasibility Study
by Ricardo Jorge Pais, João Botelho, Vanessa Machado, Gil Alcoforado, José João Mendes, Ricardo Alves and Lucinda J. Bessa
Diagnostics 2025, 15(4), 425; https://doi.org/10.3390/diagnostics15040425 - 10 Feb 2025
Cited by 3 | Viewed by 2313
Abstract
Background: Machine learning (ML) techniques have been recently proposed as a solution for aiding in the prevention and diagnosis of microbiome-related diseases. Here, we applied auto-ML approaches on real-case metagenomic datasets from saliva and subgingival peri-implant biofilm microbiomes to explore a wide range [...] Read more.
Background: Machine learning (ML) techniques have been recently proposed as a solution for aiding in the prevention and diagnosis of microbiome-related diseases. Here, we applied auto-ML approaches on real-case metagenomic datasets from saliva and subgingival peri-implant biofilm microbiomes to explore a wide range of ML algorithms to benchmark best-performing algorithms for predicting peri-implantitis (PI). Methods: A total of 100 metagenomes from the NCBI SRA database (PRJNA1163384) were used in this study to construct biofilm and saliva metagenomes datasets. Two AI-driven auto-ML approaches were used on constructed datasets to generate 100 ML-based models for the prediction of PI. These were compared with statistically significant single-microorganism-based models. Results: Several ML algorithms were pinpointed as suitable bespoke predictive approaches to apply to metagenomic data, outperforming the single-microorganism-based classification. Auto-ML approaches rendered high-performing models with Receiver Operating Characteristic–Area Under the Curve, sensitivities and specificities between 80% and 100%. Among these, classifiers based on ML-driven scoring of combinations of 2–4 microorganisms presented top-ranked performances and can be suitable for clinical application. Moreover, models generated based on the saliva microbiome showed higher predictive performance than those from the biofilm microbiome. Conclusions: This feasibility study bridges complex AI research with practical dental applications by benchmarking ML algorithms and exploring oral microbiomes as foundations for developing intuitive, cost-effective, and clinically relevant diagnostic platforms. Full article
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14 pages, 4601 KB  
Article
Modeling and Analysis of Vibration Coupling in Differential Common-Based MEMS Resonators
by Jing Zhang, Zhuo Yang, Tianhao Wu, Zhichao Yao, Chen Lin and Yan Su
Micromachines 2025, 16(2), 169; https://doi.org/10.3390/mi16020169 - 30 Jan 2025
Viewed by 1487
Abstract
In differential MEMS resonant sensors, a pair of resonators are interconnected with other structural components while sharing a common substrate. This leads to mutual coupling of vibration energy between resonators, interfering with their frequency outputs and affecting the sensor’s static performance. This paper [...] Read more.
In differential MEMS resonant sensors, a pair of resonators are interconnected with other structural components while sharing a common substrate. This leads to mutual coupling of vibration energy between resonators, interfering with their frequency outputs and affecting the sensor’s static performance. This paper aims to model and analyze the vibration coupling phenomena in differential common-based MEMS resonators (DCMR). A mechanical model of the DCMR structure was established and refined through finite element simulation analysis. Theoretical calculations yielded vibration coupling curves for two typical silicon resonant accelerometer (SRA) structures containing DCMR: SRA-V1 and SRA-V2, with coupling stiffness values of 2.361 × 10−4 N/m and 1.370 × 10−2 N/m, respectively. An experimental test system was constructed to characterize the vibration coupling behavior. The results provided coupling amplitude-frequency characteristic curves and coupling stiffness values (7.073 × 10−4 N/m and 1.068 × 10−2 N/m for SRA-V1 and SRA-V2, respectively) that validated the theoretical analysis and computational model. This novel approach enables effective evaluation of coupling intensity between 5resonators and provides a theoretical foundation for optimizing device structural designs. Full article
(This article belongs to the Special Issue Advances in MEMS Inertial Sensors)
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31 pages, 870 KB  
Article
Advances in Data Pre-Processing Methods for Distributed Fiber Optic Strain Sensing
by Bertram Richter, Lisa Ulbrich, Max Herbers and Steffen Marx
Sensors 2024, 24(23), 7454; https://doi.org/10.3390/s24237454 - 22 Nov 2024
Cited by 10 | Viewed by 2301
Abstract
Because of their high spatial resolution over extended lengths, distributed fiber optic sensors (DFOS) enable us to monitor a wide range of structural effects and offer great potential for diverse structural health monitoring (SHM) applications. However, even under controlled conditions, the useful signal [...] Read more.
Because of their high spatial resolution over extended lengths, distributed fiber optic sensors (DFOS) enable us to monitor a wide range of structural effects and offer great potential for diverse structural health monitoring (SHM) applications. However, even under controlled conditions, the useful signal in distributed strain sensing (DSS) data can be concealed by different types of measurement principle-related disturbances: strain reading anomalies (SRAs), dropouts, and noise. These disturbances can render the extraction of information for SHM difficult or even impossible. Hence, cleaning the raw measurement data in a pre-processing stage is key for successful subsequent data evaluation and damage detection on engineering structures. To improve the capabilities of pre-processing procedures tailored to DSS data, characteristics and common remediation approaches for SRAs, dropouts, and noise are discussed. Four advanced pre-processing algorithms (geometric threshold method (GTM), outlier-specific correction procedure (OSCP), sliding modified z-score (SMZS), and the cluster filter) are presented. An artificial but realistic benchmark data set simulating different measurement scenarios is used to discuss the features of these algorithms. A flexible and modular pre-processing workflow is implemented and made available with the algorithms. Dedicated algorithms should be used to detect and remove SRAs. GTM, OSCP, and SMZS show promising results, and the sliding average is inappropriate for this purpose. The preservation of crack-induced strain peaks’ tips is imperative for reliable crack monitoring. Full article
(This article belongs to the Section Optical Sensors)
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14 pages, 6097 KB  
Article
RETRACTED: Characterizing the Hydraulic Fracture Propagation Behavior in Deep Fractured Formations Based on DDM and FVM
by Bin Wang, Jingfeng Dong, Peiyao Zhou, Hui Kong, Kaixin Liu, Kebao Ding and Heng Zheng
Processes 2024, 12(11), 2469; https://doi.org/10.3390/pr12112469 - 7 Nov 2024
Cited by 2 | Viewed by 1760 | Retraction
Abstract
Hydraulic fracturing is the predominant technology for the development of unconventional resources, and understanding multi-fracture propagation behavior is the foundation for hydraulic fracturing optimization. To deeply understand multi-fracture propagation behavior in natural formations, this paper proposes a numerical simulation which considers the fluid-solid [...] Read more.
Hydraulic fracturing is the predominant technology for the development of unconventional resources, and understanding multi-fracture propagation behavior is the foundation for hydraulic fracturing optimization. To deeply understand multi-fracture propagation behavior in natural formations, this paper proposes a numerical simulation which considers the fluid-solid coupling process based on the displacement discontinuity method and the finite volume method. The simulation indicates that high stress difference and low approach angle are the main factors limiting the stimulated volume, while low stress difference and high approach angle are beneficial for creating modification zones. In addition, the natural fracture density also has a great effect on fracture propagation. With increasing natural fracture density, the stimulated volume also increases greatly, which plays a significant role in enhancing the SRA. These findings are critical in comprehending the impact of geological parameters on deep fractured shale reservoirs. Full article
(This article belongs to the Special Issue Advanced Fracturing Technology for Oil and Gas Reservoir Stimulation)
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35 pages, 10670 KB  
Article
Scalability and Replicability Analysis in Smart Grid Demonstration Projects: Lessons Learned and Future Needs
by Ilaria Losa and Rafael Cossent
Energies 2024, 17(21), 5312; https://doi.org/10.3390/en17215312 - 25 Oct 2024
Cited by 1 | Viewed by 2098
Abstract
This paper compares various approaches to the scalability and replicability analysis (SRA) of smart grid pilot projects, highlighting the need for a comprehensive SRA methodology as called for by the European Commission and International Energy Agency. This study addresses the need for a [...] Read more.
This paper compares various approaches to the scalability and replicability analysis (SRA) of smart grid pilot projects, highlighting the need for a comprehensive SRA methodology as called for by the European Commission and International Energy Agency. This study addresses the need for a standardized SRA methodology and explores how three EU-funded projects—Platone, EUniversal, and IElectrix—adapted the general guidelines developed by the BRIDGE initiative. These guidelines provide recommendations for developing a comprehensive large-scale deployment analysis. The results show that while the guidelines are usable and flexible, project-specific conditions and data availability limitations—particularly in regulatory and technical analysis—can pose challenges. Some key recommendations to overcome these and facilitate future applications are identified. These include defining SRA methodologies and securing data-sharing agreements early. The lack of standardized approaches for presenting SRA results hampers cross-project comparison. Thus, creating an open-use case repository and updating the BRIDGE guidelines with more detailed examples, benchmarks, and reference networks is recommended. Additionally, linking SRA with cost–benefit analysis (CBA) is suggested in order to evaluate the commercial viability of smart grid solutions. The paper concludes that while the BRIDGE guidelines have proven to be fit for purpose, further developments are needed to facilitate their practical application in real-world projects. Full article
(This article belongs to the Section A1: Smart Grids and Microgrids)
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21 pages, 4976 KB  
Article
Characterization of the Virome Associated with the Ubiquitous Two-Spotted Spider Mite, Tetranychus urticae
by Lucas Yago Melo Ferreira, Anderson Gonçalves de Sousa, Joannan Lima Silva, João Pedro Nunes Santos, David Gabriel do Nascimento Souza, Lixsy Celeste Bernardez Orellana, Sabrina Ferreira de Santana, Lara Beatriz Correia Moreira de Vasconcelos, Anibal Ramadan Oliveira and Eric Roberto Guimarães Rocha Aguiar
Viruses 2024, 16(10), 1532; https://doi.org/10.3390/v16101532 - 27 Sep 2024
Cited by 4 | Viewed by 1897
Abstract
Agricultural pests can cause direct damage to crops, including chlorosis, loss of vigor, defoliation, and wilting. In addition, they can also indirectly damage plants, such as by transmitting pathogenic micro-organisms while feeding on plant tissues, affecting the productivity and quality of crops and [...] Read more.
Agricultural pests can cause direct damage to crops, including chlorosis, loss of vigor, defoliation, and wilting. In addition, they can also indirectly damage plants, such as by transmitting pathogenic micro-organisms while feeding on plant tissues, affecting the productivity and quality of crops and interfering with agricultural production. Among the known arthropod pests, mites are highly prevalent in global agriculture, particularly those from the Tetranychidae family. The two-spotted spider mite, Tetranychus urticae, is especially notorious, infesting about 1600 plant species and causing significant agricultural losses. Despite its impact on agriculture, the virome of T. urticae is poorly characterized in the literature. This lack of knowledge is concerning, as these mites could potentially transmit plant-infecting viral pathogens, compromising food security and complicating integrated pest management efforts. Our study aimed to characterize the virome of the mite T. urticae by taking advantage of publicly available RNA deep sequencing libraries. A total of 30 libraries were selected, covering a wide range of geographic and sampling conditions. The library selection step included selecting 1 control library from each project in the NCBI SRA database (16 in total), in addition to the 14 unique libraries from a project containing field-collected mites. The analysis was conducted using an integrated de novo virus discovery bioinformatics pipeline developed by our group. This approach revealed 20 viral sequences, including 11 related to new viruses. Through phylogenetic analysis, eight of these were classified into the Nodaviridae, Kitaviridae, Phenuiviridae, Rhabdoviridae, Birnaviridae, and Qinviridae viral families, while three were characterized only at the order level within Picornavirales and Reovirales. The remaining nine viral sequences showed high similarity at the nucleotide level with known viral species, likely representing new strains of previously characterized viruses. Notably, these include the known Bean common mosaic virus (BCMV) and Phaseolus vulgaris alphaendornavirus 1, both of which have significant impacts on bean agriculture. Altogether, our results expand the virome associated with the ubiquitous mite pest T. urticae and highlight its potential role as a transmitter of important plant pathogens. Our data emphasize the importance of continuous virus surveillance for help in the preparedness of future emerging threats. Full article
(This article belongs to the Special Issue Molecular Virus–Insect Interactions, 2nd Edition)
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21 pages, 7200 KB  
Systematic Review
Not Every Size Fits All: Surgical Corridors for Clival and Cervical Chordomas—A Systematic Review of the Literature and Illustrative Cases
by Rosario Maugeri, Lapo Bonosi, Lara Brunasso, Roberta Costanzo, Samuele Santi, Francesco Signorelli, Domenico Gerardo Iacopino and Massimiliano Visocchi
J. Clin. Med. 2024, 13(17), 5052; https://doi.org/10.3390/jcm13175052 - 26 Aug 2024
Cited by 1 | Viewed by 2177
Abstract
Introduction. Clival chordomas represent a rare but clinically significant subset of skull base tumors, characterized by a locally aggressive nature and a location in proximity to vital neurovascular structures. Surgical resection, often combined with adjuvant therapies, remains the cornerstone of clival chordoma treatment, [...] Read more.
Introduction. Clival chordomas represent a rare but clinically significant subset of skull base tumors, characterized by a locally aggressive nature and a location in proximity to vital neurovascular structures. Surgical resection, often combined with adjuvant therapies, remains the cornerstone of clival chordoma treatment, and various approaches and techniques have evolved to maximize tumor removal while preserving neurological function. Recent advancements in skull base surgery, imaging, and adjuvant therapies have improved outcomes by reducing morbidity and thus enhancing long-term survival. Methods and Results. We have conducted a systematic review on PubMed/Medline following PRISMA guidelines regarding indications, the extent of resection (EOR), and complication rates. Then, we present three illustrative cases from our personal experience, which started 25 years ago with CVJ instrumentation procedures and 15 years ago with anterior decompressive transmucosal procedures performed with the aid of an operative microscope, an endoscope, and neuroradiological monitoring. Conclusions. Traditionally, the transoral approach (TOA) is the most frequently used corridor for accessing the lower clivus and the anterior craniovertebral junction (CVJ), without the need to mobilize or retract neural structures; however, it is associated with a high rate of complications. The endonasal approach (EEA) provides access to the anterior CVJ as well as to the lower, middle, and superior clivus, decreasing airway and swallowing morbidity, preserving palatal function, decreasing postoperative pain, and reducing the incidence of tracheostomy. The submandibular retropharyngeal approach (SRA) allows unique access to certain cervical chordomas, which is better suited when the lesion is located below the clivus and in the midline. Full article
(This article belongs to the Section Orthopedics)
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