Integration of Genomics, Metabolomics, and Host Immunity: A focus of Metabolic Immune System

A special issue of Vaccines (ISSN 2076-393X).

Deadline for manuscript submissions: closed (31 July 2023) | Viewed by 7423

Special Issue Editors


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Guest Editor
Research Professor, Institute for Liver and Digestive Diseases, College of Medicine, Hallym University, Chuncheon, Korea
Interests: metabolomics; metabolomics profiling; gut microbiome; immunology
Special Issues, Collections and Topics in MDPI journals

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Guest Editor
Associate Professor, Department Biomedical Sciences, School of BioSciences and Technology, VIT, Vellore, Tamil Nadu, India
Interests: human disease; genetics and molecular biology; toxicology; molecular biology; immunology
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

The scope of this Special Issue covers the recent progress in immunological metabolites as they are related to immunology, host immunity, and vaccines. Our key aim is to bring the latest advances in various metabolic approaches for the detection and treatment of various types of diseases. Metabolomics and metabolite profiling research in the field of COVID-19 will be a strong focus in this Special Issue. Further metabolite, immunity, and metabolic pathway development research is more important for the treatment of COVID-19. Additionally, this Issue aims to cover the gene, mRNA, protein, and metabolite-based immunological pathway analysis and the pharmaceutical development and impact on disease prevention.

Dr. Raja Ganesan
Dr. Abilash Valsala Gopalakrishnan
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Vaccines is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • metabolomics
  • immunology
  • immunity
  • microbiota
  • metabolites
  • COVID-19

Published Papers (3 papers)

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Research

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12 pages, 3312 KiB  
Article
Adenovirus Vaccine Containing Truncated SARS-CoV-2 Spike Protein S1 Subunit Leads to a Specific Immune Response in Mice
by Keda Chen, Danrong Shi, Chaonan Li, Zhongbiao Fang, Yikai Guo, Wenjie Jiang, Jiaxuan Li, Hongyu Li and Hangping Yao
Vaccines 2023, 11(2), 429; https://doi.org/10.3390/vaccines11020429 - 13 Feb 2023
Cited by 1 | Viewed by 1850
Abstract
The development of an efficient and safe coronavirus disease 2019 (COVID-19) vaccine is a crucial approach for managing the severe acute respiratory disease coronavirus 2 (SARS-CoV-2) pandemic in light of current conditions. In this study, we produced a shortened segment of the optimized [...] Read more.
The development of an efficient and safe coronavirus disease 2019 (COVID-19) vaccine is a crucial approach for managing the severe acute respiratory disease coronavirus 2 (SARS-CoV-2) pandemic in light of current conditions. In this study, we produced a shortened segment of the optimized SARS-CoV-2 spike gene (2043 bp, termed S1) that was able to encode a truncated S1 protein. The protein was tested to determine if it could elicit efficient immunization in mice against SARS-CoV-2. The presence of the S1 protein was confirmed with immunofluorescence and Western blotting. An adenovirus vaccine bearing the S1 gene fragment (Ad-S1) was administered intramuscularly to mice four times over 4 weeks. SARS-CoV-2 S1 protein humoral immunity was demonstrated in all immunized mice. The serum from immunized mice demonstrated excellent anti-infection activity in vitro. A robust humoral immune response against SARS-CoV-2 was observed in the mice after vaccination with Ad-S1, suggesting that the adenovirus vaccine may aid the development of vaccines against SARS-CoV-2 and other genetically distinct viruses. Full article
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Review

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22 pages, 881 KiB  
Review
Crosstalk between COVID-19 Infection and Kidney Diseases: A Review on the Metabolomic Approaches
by Reshma Murali, Uddesh Ramesh Wanjari, Anirban Goutam Mukherjee, Abilash Valsala Gopalakrishnan, Sandra Kannampuzha, Arunraj Namachivayam, Harishkumar Madhyastha, Kaviyarasi Renu and Raja Ganesan
Vaccines 2023, 11(2), 489; https://doi.org/10.3390/vaccines11020489 - 20 Feb 2023
Cited by 4 | Viewed by 2610
Abstract
The novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes COVID-19, a respiratory disorder. Various organ injuries have been reported in response to this virus, including kidney injury and, in particular, kidney tubular injury. It has been discovered that infection with the virus [...] Read more.
The novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) causes COVID-19, a respiratory disorder. Various organ injuries have been reported in response to this virus, including kidney injury and, in particular, kidney tubular injury. It has been discovered that infection with the virus does not only cause new kidney disease but also increases treatment difficulty and mortality rates in people with kidney diseases. In individuals hospitalized with COVID-19, urinary metabolites from several metabolic pathways are used to distinguish between patients with acute kidney injury (AKI) and those without. This review summarizes the pathogenesis, pathophysiology, treatment strategies, and role of metabolomics in relation to AKI in COVID-19 patients. Metabolomics is likely to play a greater role in predicting outcomes for patients with kidney disease and COVID-19 with varying levels of severity in the near future as data on metabolic profiles expand rapidly. Here, we also discuss the correlation between COVID-19 and kidney diseases and the available metabolomics approaches. Full article
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22 pages, 775 KiB  
Review
A Systematic Role of Metabolomics, Metabolic Pathways, and Chemical Metabolism in Lung Cancer
by Sandra Kannampuzha, Anirban Goutam Mukherjee, Uddesh Ramesh Wanjari, Abilash Valsala Gopalakrishnan, Reshma Murali, Arunraj Namachivayam, Kaviyarasi Renu, Abhijit Dey, Balachandar Vellingiri, Harishkumar Madhyastha and Raja Ganesan
Vaccines 2023, 11(2), 381; https://doi.org/10.3390/vaccines11020381 - 07 Feb 2023
Cited by 7 | Viewed by 2483
Abstract
Lung cancer (LC) is considered as one of the leading causes of cancer-associated mortalities. Cancer cells’ reprogrammed metabolism results in changes in metabolite concentrations, which can be utilized to identify a distinct metabolic pattern or fingerprint for cancer detection or diagnosis. By detecting [...] Read more.
Lung cancer (LC) is considered as one of the leading causes of cancer-associated mortalities. Cancer cells’ reprogrammed metabolism results in changes in metabolite concentrations, which can be utilized to identify a distinct metabolic pattern or fingerprint for cancer detection or diagnosis. By detecting different metabolic variations in the expression levels of LC patients, this will help and enhance early diagnosis methods as well as new treatment strategies. The majority of patients are identified at advanced stages after undergoing a number of surgical procedures or diagnostic testing, including the invasive procedures. This could be overcome by understanding the mechanism and function of differently regulated metabolites. Significant variations in the metabolites present in the different samples can be analyzed and used as early biomarkers. They could also be used to analyze the specific progression and type as well as stages of cancer type making it easier for the treatment process. The main aim of this review article is to focus on rewired metabolic pathways and the associated metabolite alterations that can be used as diagnostic and therapeutic targets in lung cancer diagnosis as well as treatment strategies. Full article
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