Mathematical Models and Control of Biological Systems

A special issue of Mathematics (ISSN 2227-7390). This special issue belongs to the section "E3: Mathematical Biology".

Deadline for manuscript submissions: closed (31 January 2025) | Viewed by 3412

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Escuela Superior de Apan, Autonomous University of the State of Hidalgo, Carretera Apan-Calpulalpan, Km. 8., Chimalpa Tlalayote s/n, Hidalgo 43900, Mexico
Interests: kinetic modeling; chaos in biological systems; ecological models; time-delayed modeling; evolutionary optimization approach; nonlinear control
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Special Issue Information

Dear Colleagues,

Biological systems have a variable nature and complex behaviors, making formalizing their performance through mathematics tools an open problem for researchers. In addition, biological systems form networks for their survival, which makes these microcosms intelligent systems. In fact, there is no theoretical basis for any of the reaction mechanisms involved in biological systems proposed in the literature currently available, due to the complexity of the bio-reactions that occur in biological systems and to the exact stoichiometric relationship that allows for theoretically limiting the reaction rates. Therefore, models must be developed on an environmental conditions basis to depict the approximate phenomena under the expected biological systems conditions. Naturally, a complex mathematical model attempting to encompass so many conditions should result in great predictive capability (by increasing time and computational effort), but in real systems, this is usually not practical. As a phenomenological system, biological systems models rely entirely on experimental data to both fit and validate a proposed kinetic mechanism. If the modeling is aimed at the control, for example, an efficiency increase in the output of a biotechnological process is desired, then it is often sufficient to consider individual blocks as components and examine the stationary states of a system. By solving inverse problems, they allow the estimation of kinetic and physical parameters of a holistic system, which is impossible in experimentation without fractionating a system. Biological systems play a vital role in green industries, producing important chemical and biochemical compounds. In this system, living organisms, also known as microbes (plant, animal, and bacterial cells), are converted into marketable products. Finally, the application of biological systems control based on mathematical models is reflected in higher productivity, embracing new technologies in intelligent production and industrial growth.

Prof. Dr. Pablo Antonio López-Pérez
Guest Editor

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Keywords

  • modeling in bioprocesses
  • modeling for bioreactors
  • chaos in biological systems
  • ecological models
  • mathematical modeling of infectious disease and epidemic model
  • mathematical model with time-delay
  • cellular model
  • complex systems modeling
  • evolutionary optimization approach
  • in silico systems

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Published Papers (2 papers)

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Research

26 pages, 7420 KiB  
Article
Estimation of Sporulated Cell Concentration of Bacillus thuringiensis in a Batch Biochemical Reactor via Simple State Observers
by José Luis Zárate-Castrejón, Pablo A. López-Pérez, Milagros López-López, Carlos A. Núñez-Colín, Rafael A. Veloz-García, Hamid Mukhtar and Vicente Peña-Caballero
Mathematics 2024, 12(24), 3996; https://doi.org/10.3390/math12243996 - 19 Dec 2024
Viewed by 1116
Abstract
This paper presents a contrast of two different observation strategies viz a nonlinear observer and a classical extended Luenberger observer applied to a bioreactor system for Bacillus thuringiensis production. The performance of the two observers was evaluated under different conditions, both with and [...] Read more.
This paper presents a contrast of two different observation strategies viz a nonlinear observer and a classical extended Luenberger observer applied to a bioreactor system for Bacillus thuringiensis production. The performance of the two observers was evaluated under different conditions, both with and without state perturbations. Firstly, equal initial conditions were considered without the presence of white noise in the measurement of dissolved oxygen concentration in the culture medium. The performance was then analyzed by perturbing the maximum cell growth rate with equal and different initial conditions, and, finally, the performance of the observer with the presence of white noise was evaluated. The proposed observer performed better than the extended Luenberger observer against initial conditions different from the model. The results of this study are of great interest, as they provide insight into the estimation of the state of the dynamics for the B. thuringiensis bioreactor in a batch mode. In addition, these results provide valuable information for future research in the design of observers for B. thuringiensis bioprocessing. Full article
(This article belongs to the Special Issue Mathematical Models and Control of Biological Systems)
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18 pages, 518 KiB  
Article
Hopf Bifurcation and Control for the Bioeconomic Predator–Prey Model with Square Root Functional Response and Nonlinear Prey Harvesting
by Huangyu Guo, Jing Han and Guodong Zhang
Mathematics 2023, 11(24), 4958; https://doi.org/10.3390/math11244958 - 14 Dec 2023
Cited by 9 | Viewed by 1325
Abstract
In this essay, we introduce a bioeconomic predator–prey model which incorporates the square root functional response and nonlinear prey harvesting. Due to the introduction of nonlinear prey harvesting, the model demonstrates intricate dynamic behaviors in the predator–prey plane. Economic profit serves as a [...] Read more.
In this essay, we introduce a bioeconomic predator–prey model which incorporates the square root functional response and nonlinear prey harvesting. Due to the introduction of nonlinear prey harvesting, the model demonstrates intricate dynamic behaviors in the predator–prey plane. Economic profit serves as a bifurcation parameter for the system. The stability and Hopf bifurcation of the model are discussed through normal forms and bifurcation theory. These results reveal richer dynamic features of the bioeconomic predator–prey model which incorporates the square root functional response and nonlinear prey harvesting, and provides guidance for realistic harvesting. A feedback controller is introduced in this paper to move the system from instability to stability. Moreover, we discuss the biological implications and interpretations of the findings. Finally, the results are validated by numerical simulations. Full article
(This article belongs to the Special Issue Mathematical Models and Control of Biological Systems)
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