Section Editors

Section Board for 'Bioinformatics and Systems Biology' (25)

Please see the section webpage for more information on this section.

Prof. Dr. Lukasz Kurgan
Website
Section Editor-in-Chief
Computer Science, Virginia Commonwealth University, Richmond, VA 23284, USA
Interests: structural bioinformatics; intrinsically disordered proteins; protein function prediction; protein-ligand interactions; protein-nucleic acids interactions; structural genomics
Special Issues and Collections in MDPI journals:
Dr. Pedro J. Ballester
Website
Cancer Research Center of Marseille, INSERM U1068, F-13009 Marseille, France
Interests: structure bioinformatics; cancer pharmaco-omics modelling; biomarker discovery; precision oncology; chemoinformatics; drug discovery informatics; virtual screening; machine learning
Special Issues and Collections in MDPI journals:
Prof. Dr. Hiroyuki Matsumoto
Website
1. Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA
2. Clinical Proteomics and Gene Therapy Laboratory, Kurume University School of Medicine, Kurume, Fukuoka 830-0011, Japan
Interests: proteomics; mass spectrometry; protein phosphorylation; signal transduction; systems biology
Dr. Sarah Teichmann
Website
EMBL-European Bioinformatics Institute and Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
Interests: structural bioinformatics; protein complexes, assembly, biophysics; genomics; immunology
Prof. Dr. Sudhir Kumar
Website
Institute for Genomics and Evolutionary Medicine, Temple University, 1925 N. 12th Street, Philadelphia, PA 19122, USA
Interests: personal genomics; disease origins; functional proteomics; discovery bioinformatics
Prof. Dr. Philip E. Bourne
Website
Data Science Institute, University of Virginia, Charlottesville, VA 22904, USA
Interests: structural bioinformatics; molecular visualization; early stage drug discovery; drug off-target effects and polypharmacology; protein evolution; cell signaling
Prof. Dr. David Beveridge
Website
Chemistry Department and Molecular Biophysics Program, Wesleyan University, Middletown, Connecticut 06459, USA
Interests: theoretical physical chemistry; molecular biophysics; structural biology and bioinformatics; statistical thermodynamics; molecular dynamics computer simulations; structure and dynamics of nucleic acids and proteins, protein ligand binding, allosteric signal transduction mechanisms
Dr. Alessandro Paiardini
Website
Department of Biochemical Sciences “A. Rossi Fanelli”, Sapienza University of Rome, P.le Aldo Moro 5, 00185 Rome, Italy
Interests: Drug Design; Molecular Docking and Virtual Screening; Protein Structure Prediction and Homology Modeling; Protein Structure and Evolution
Prof. Dr. Jürg Bähler
Website
Department of Genetics, Evolution & Environment and UCL Cancer Institute, University College London, Darwin Building, Gower Street, London, WC1E 6BT, UK
Interests: gene regulation; genomics; transcriptomics; next-generation sequencing; non-coding RNAs; genome evolution; fission yeast; oxidative stress response; cellular quiescence and ageing
Special Issues and Collections in MDPI journals:
Dr. Khaled Barakat
Website
Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta, Edmonton, Canada
Interests: computational drug discovery; molecular dynamics simulations; free energy calculations; molecular docking; systems biology; mathematical biology; immunotherapy; ion channel research
Dr. Mohit Kumar Jolly
Website
Centre for BioSystems Science and Engineering, Indian Institute of Science, Bangalore, India
Interests: metastasis; mathematical oncology; systems biology; computational biology; phenotypic plasticity; cellular decision-making; cancer stem cells; epithelial-mesenchymal transition
Special Issues and Collections in MDPI journals:
Dr. Gian Gaetano Tartaglia
Website
Istituto Italiano di Tecnologia, Genova, Italy
Interests: computational modelling; phase-separation; solubility; ribonucleoprotein networks
Dr. Naglis Malys
Website
Bioprocess Research Centre, Faculty of Chemical Technology, Kaunas University of Technology, Radvilėnų pl. 19, Kaunas LT-50254, Lithuania
Interests: systems biology; synthetic biology; yeast biology; microbial biotechnology; bacteriophage biology; metabolic engineering; metabolism; proteins; enzymes; metabolites; gene expression regulation; transcription factors; translation factors
Prof. Dr. Mire Zloh
Website
UCL School of Pharmacy, UCL, London, UK
Faculty of Pharmacy, University Business Academy, Novi Sad, Serbia
Interests: computer-aided molecular design; molecular dynamics; docking; in silico screening; structural chemistry; NMR spectroscopy; antimicrobial resistance; multidrug resistance; efflux pump inhibition; antimicrobial peptides; dendrimer design
Special Issues and Collections in MDPI journals:
Dr. Laurent Soulère
Website
Institut de Chimie et Biochimie Moléculaire et Supramoléculaire, Villeurbanne, France
Special Issues and Collections in MDPI journals:
Dr. Dragos Horvath
Website
Laboratoire de Chemoinformatique; UMR 7140, Université de Strasbourg/CNRS, 1 rue B. Pascal, Strasbourg 67000, France
Interests: chemoinformatics - methodology & applications; computer-aided drug design; flexible docking; nature-inspired computing
Special Issues and Collections in MDPI journals:
Prof. Dr. Andrey P. Anisimov
Website
State Research Center for Applied Microbiology and Biotechnology, 142279 Obolensk, Moscow Region, Russia
Interests: molecular bacteriology; infectious diseases; molecular biology of host-vector-pathogen interactions; microbial pathogenesis; virulence factors; vaccinology; biotechnology
Special Issues and Collections in MDPI journals:
Prof. Dr. Björn Wallner
Website
Division of Bioinformatics, Department of Physics, Chemistry and Biology, Linköping University, Linköping SE, Sweden
Interests: structural bioinformatics; protein structure prediction; protein docking; protein-protein interactions; protein-peptide interactions; disordered proteins; integrative modeling; machine learning; ligand binding
Prof. Dr. Jörg Gsponer
Website
Michael Smith Laboratories, Department of Biochemistry & Molecular Biology, University of British Columbia, Vancouver V6T 1Z4, Canada
Interests: structural bioinformatics; molecular modeling; intrinsically disordered proteins; protein evolution; allostery; protein interactions; phase separation
Prof. Kyungsook Han
Website
Department of Computer Engineering, Inha University, Incheon, Korea
Interests: machine learning; protein-binding motif; protein-RNA interaction; protein-RNA interaction; cancer; gene correlation network; protein-protein interaction
Dr. Michael Hackenberg
Website
Computational Epigenomics Lab, Department of Genetics, Faculty of Science, University of Granada, 18071 Granada, Spain
Interests: Computational Genomics, Bioinformatics, small RNA detection and prediction, miRNA targets, small RNAs at the interface between parasites and hosts, NGS data analysis, Epigenomics, Epitranscriptomics
Special Issues and Collections in MDPI journals:
Prof. Dr. Jianlin Cheng
Website
Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO 65211, USA
Interests: protein structure prediction; 3D genome modeling; protein function prediction; biological network modeling; machine learning
Special Issues and Collections in MDPI journals:
Dr. Michal Brylinski
Website
Department of Biological Sciences, Louisiana State University, Baton Rouge, LA, USA
Interests: panomics data science, bioinformatics, cheminformatics, network biology, high-performance computing
Prof. Dr. Daisuke Kihara
Website
Department of Biological Sciences, Department of Computer Science, Purdue University, West Lafayette, IN 47907, USA
Interests: protein docking; protein structure prediction; protein structure modeling for cryo-electron microscopy; protein function prediction; virtual drug screening; protein bioinformatics
Special Issues and Collections in MDPI journals:
Prof. Dr. Ruth Nussinov
Website
Computational Biology Group, Cancer and Inflammation Program, National Cancer Institute, Frederick, MD, USA
Interests: protein structure; dynamics and function; signaling; allosteric drugs; cellular networks; key oncogenic proteins; computational biology
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