Abstract
We propose a fast L2-1σ finite element method for solving the time fractional Keller–Segel equations with a Caputo fractional derivative of . Firstly, the fast L2-1σ scheme on the graded mesh is used to discretize the time fractional derivative. This approach relies on the sum of exponentials (SOE) skill to speed up the convolution kernel. Thus, we overcome the computational cost caused by the nonlocality of fractional derivatives. Then, by combining finite element discretization in spatial direction, a fully implicit numerical scheme is derived. Subsequently, we establish the stability and an -robust error analysis of the fully discrete scheme. Finally, we present some numerical examples to demonstrate the correctness of our theoretical results.
1. Introduction
In recent years, fractional partial differential equations have been widely applied in different branches, for instance, biology [1], physics [2], control system [3], and finance [4]. And a large number of researchers have shown great interest in theoretical and numerical analysis. Let be a open and bounded domain of with a smooth boundary . Given , we shall be interested in the numerical approximation for a time-fractional Keller–Segel (TFKS) equation
where are a given functions, and represents the Caputo fractional derivative, which is defined as
When , model (1) is called the classic Keller–Segel (KS) equation, which was first introduced in [5,6] to capture the chemotaxis response of bacteria towards chemical agents, where stands for the density of bacteria and represents the concentration of the oxygen. In biology and mathematics, diffusion and chemotaxis are the basis of the motion of bacteria [7,8]. Thus, KS equations provide a powerful framework to understand the intricate interplay between the motion of bacteria, chemical signaling, and emergent pattern formation [9]. However, anomalous diffusion is a ubiquitous phenomenon in the process of biological movement [10,11,12]. Moreover, we note that anomalous diffusion can be modeled as continuous-time random walks at the macroscopic level [13], so we can modify the diffusion equation by applying a fractional temporal operator. For instance, Langlands and Henry [14] developed fractional chemotaxis diffusion equations with anomalous diffusion for modeling the chemically directed transport of biological organisms. Their work studied the influence of substrate heterogeneity on the dynamics of the KS model by the means of fractional calculus in [15].
Let us recall some work in the literature concerning TFKS equations with the Caputo fractional derivative. By the Aubin–Lions lemma and its variants, the existence of a weak solution was introduced in [16]. Zhou et al. [17] proved the existence of a solution by using the Faedo–Galerkin method with some compactness arguments, and the Mittag–Leffler stability of the solution was given. Their work has established the existence of the nonnegative weak solution in [18]. In [19], some refined results regarding the large time behavior of solutions were derived, and the well-posedness and the asymptotic stability of solutions in Marcinkiewicz spaces were studied. The well-posedness and the blow-up of the solution were established in the setting of Lebesgue and Besov spaces from [20]. El-Sayed et al. [21] obtained the analytical solution by the Adomians decomposition method. The modified homotopy analysis transform method was developed in [22]. Additionally, studies on the fractional KS equations with other fractional derivative operators can be found in [23,24,25,26].
Less work has been carried out on the numerical methods of the TFKS equation. To our knowledge, it is only mentioned in [27]. This work proposed a fractional class of explicit Adams–Bashforth and implicit Adams–Moulton methods of first-and second-order accuracy to solve the TFKS equations with the sufficiently smooth solution. Nevertheless, a growing number of studies suggest that the solution of the time fractional partial differential equations is weakly singular near [28,29], i.e., there exists a constant C, for any :
To overcome the initial time singularity, the L1, L2-1σ, L2 and DG methods on the graded meshes or general nonuniform meshes have been developed in [30,31,32,33,34,35]. The L1, L2 and CQ schemes with proper initial correction using uniform step size can recover the optimal error estimates; see [36,37,38,39]. Another important feature is the problem of large computational cost due to the nonlocality of the fractional derivatives. Then, the fast L1, L2 and L2-1σ schemes based on the sum of exponentials (SOE) approximation were proposed and analyzed in [40,41,42,43,44].
The main difficulties in the study of problem (1) are the weak singularity and nonlocality of the fractional time derivative and the nonlinearity of the equation itself. In order to derive high-precision numerical solutions, we firstly use the nonuniform L2-1σ scheme to handle the singularity of solutions at the initial time, and this scheme is high-order. Inspired by [45,46], we shall adopt the SOE approximation to speed up the computation of the L2-1σ scheme, thus reducing the computational storage and computational cost from and to and , respectively. Here N denotes the number of time step and stands for the number of the quadrature nodes. Next, we use the finite element to discretize spatial direction and combine it with the fast L2-1σ method to obtain an implicit scheme. Compared to the explicit scheme, our approach is unconditionally stable, and its accuracy will not decrease. By the improved fractional Grönwall inequality, we further prove the stability and the -robust error estimates of the numerical scheme. Finally, some numerical results demonstrate the correctness of the theoretical analysis.
The main contributions of our work are as follows:
- We consider for the first time the numerical method for solving singular cases in the fractional KS models. Compared to the smooth case in reference [27], our numerical method is more in line with the characteristics of fractional order models.
- A fast numerical scheme is obtained by constructing a fast nonuniform L2-1σ scheme with the finite element method for the time fractional Keller–Segel equations. This numerical scheme has the advantages of high accuracy and low computational storage and can effectively handle the singularity of the solution at .
- We prove the stability of the numerical scheme for both the and norms under some constraints on the time step ratio and obtain a -robust error estimate by the fractional Grönwall inequality. We note that this theoretical analysis framework is also applicable to the more complex time fractional-order coupled diffusion systems [47].
The outline of this work is as follows. In Section 2, a fast L2-1σ method and the fully discrete scheme are introduced. In Section 3, we establish the unconditional stability of the fully discrete scheme in both and norms. In Section 4, an -robust error estimate is provided in both and norms. In Section 5, we propose several numerical examples to verify theoretical analysis. Finally, a summary of this work is made in Section 6.
2. Fully Discrete Scheme for the TFKS Equations
Let be the Lebesgue space with norm for ; we denote as the Sobolev space with norm . For , we define and . We also denote and . For the sake of simplicity, we shall apply the letter C to denote a positive constant that is independent of the mesh size and time size.
A weak form of the problem (1) is as follows. Find such that
Let be the time step; we define a nonuniform time partition with the time point Here is the grading constant. For , we let and . We also define and for . Setting here and after, the L2-1σ approximation of the Caputo derivative (2) is given below [48]. For , we have
where stands for the linear interpolate with the nodes , denotes the quadratic interpolate at and . Setting the step size ratio for and for , the L2-1σ scheme in (4) can be reformulated as
with
and
As can be seen from the above, the computational storage and cost of the L2-1σ scheme are or , which are too expensive. Thus, we consider the fast L2-1σ scheme based on the SOE technique to approximate the convolution kernel . The following lemmas are mainly adopted.
Lemma 1
([40]). For the given parameters and T, there exists a family of points and weight such that
where
Due to is of the order for or for when we fix , the complexity of our algorithm is nearly optimal. Based on the above lemma, the history part in (4) can be written as
where and
Combining (4) and (5), the fast L2-1σ scheme can be represented as
where can be calculated by the recurrence formula (6). Obviously, the fast algorithm reduces computational storage and cost from and to and , respectively. Then, we equivalently reformulate (7) into the following convolution form
where
with
Then, the discrete convolution kernel of (8) has the following properties [49]:
with
Lemma 2
([50]). Assume that Then, the fast L2-1σ scheme (7) satisfies the following truncation errors:
and
for .
Let (or ) be the approximate value of u (or v) at and (or ). We apply the fast L2-1σ scheme to (3), and an implicit semi-discrete scheme reads as follows. For , find such that
Define the Mittag–Leffler functions
By utilizing Duhamel’s principle, we have the solution’s representation of the problem (1):
Furthermore, we calculate the gradient of (15) to obtain
Generally, we call the above solutions “mild solution”. Based on the mild solution (14)–(16), we can derive a prior bounds of the solution in the problem (1).
Lemma 3
([19]). Suppose that are sufficiently small. Then, there exists a unique global solution to the problem (1) such that
and has the following time decay behavior
where .
According to the Lemma 3, we assume that is bounded, i.e., for any , there exists a constant , such that
Then, we shall derive the following boundedness of :
where .
Let be a uniform mesh partition of with the mesh size h. We define that is the finite element space satisfying the homogeneous Dirichlet condition. Define the Ritz projection satisfying
Then, the following interpolation estimates hold [51]
for any .
Together, the finite element method with the semi-discrete scheme (13) and the fully discrete scheme of the target problem (1) are as follows: For , find such that
Similarly, we give the boundedness of by using the the inverse inequality, adn we have
Thus, when v is smooth enough, there exists a constant , such that
3. Stability Analysis of Fully Discrete Scheme
In this section, we shall establish the stability of the fully discrete scheme (20) in both and norms. Inspired by [30], we define a sequence of the discrete complementary convolution kernels by
By the theoretical basis provided in [52], we shall derive that the kernel satisfies the following three properties [50]:
We shall introduce two useful lemmas, which play a significant role in the subsequent theory.
Lemma 4
([50]). For any sequence , the following holds:
Lemma 5
([50]). Let be the nonnegative constants with , where is a positive constant. Assume that the nonnegative sequences , and satisfy
If the maximum time step satisfies , we can get
In the following, we shall present the stability results of the fully discrete scheme in both and norms.
Theorem 1.
Let be the solution to the fully discrete scheme (20). For , there exists a positive constant , and the following holds
where C is α-robust constant.
Proof.
Setting in the first equation of the fully discrete scheme (20), and utilizing the Cauchy–Schwartz inequality and the Young’s inequality, we have
It follows from the Lemma 5 and (25) that
Let in the second equation of the fully discrete scheme (20). We have
Then, we use Young’s inequality and (25) to get
By Lemma 5, we have
Together with (28), (26) has been completed.
Let in the first equation of the fully discrete scheme (20). The Cauchy–Schwartz inequality and the Young’s inequality are used to yield
Here sufficient small. By the Poincaré inequality in (30) and (25), we obtain
Then, based on Lemma 5, we have
Setting in the second equation of the fully discrete scheme (20), we have
By using the Cauchy–Schwartz inequality and (25), we thus obtain
By Lemma 5, we get
Then, (27) has been completed. □
4. Error Analysis of the Fully Discrete Scheme
In this section, we focus on the error analysis of the fully discrete scheme. Define
Firstly, we provide the spatial error estimates for the fully discrete scheme (20).
Theorem 2.
Proof.
Subtract the first equation of the semi-discrete scheme (13) from the first equation of the fully discrete scheme (20) to obtain
By the definition (8), it follows from (9), (10) and (21) that
Taking in (35) and by (25), we have
Due to , by Lemma 5 and (24), we have
Subtract the second equation of the semi-discrete scheme (13) from the second equation of the fully discrete scheme (20) to yield
Let and apply Young’s inequality and (25) to get
Similar to (36), we have
Therefore, we obtain that
Due to , by Lemma 5 and (24), we have
where
Thus, by using the triangle inequality, (4) and the interpolation error (19), we can obtain (33).
Taking in the first equation of the semi-discrete scheme (13) and the fully discrete scheme (20), and subtracting the two equations to obtain
Here, we set the parameter to be sufficient small. Also, we have
Thus, by the Poincaré inequality and (25), we obtain
By using the fractional Grönwall inequality, we have
Taking in Equation (38) and using Young’s inequality and interpolation estimate (19), we get
Also, Thus, similar to the deduction of (39), it can be concluded that
Finally, the triangle inequality and (41) can be used to prove (34). □
Assume that
Next, we shall introduce the error estimates of the fully discrete scheme (20) in both and norms.
Theorem 3.
Proof.
Define
Subtract the second equation of the semi-discrete scheme (13) from the second equation of the weak form (3) to yield
Due to
Taking , we can obtain
According to the truncation errors (11) and (12), it follows from (25) that
Thus, by the Lemma 5, (23) and , we can obtain
Here
Subtracting the first equation of the semi-discrete scheme (13) from the second equation of the weak form (3) and shifting the equation terms to obtain
Taking and by (25), we obtain
Then, by the fractional Grönwall inequality, we have
Finally, the conclusion (42) can be obtained by utilizing the triangular inequality, (46) and (33).
5. Numerical Experiment
In this section, we shall provide some numerical examples to illustrate the effectiveness of our numerical scheme and the reliability of our theoretical results. To derive the numerical solution, we use the fast L2-1σ scheme to approximate the time Caputo fractional derivative and apply the linear finite element to discretize spatial direction. Moreover, we choose the tolerance error and the cut-off time to speed up the convolution computation of the L2-1σ scheme. At each time level, the nonlinear algebraic systems is solved by using a fixed-point algorithms with the termination error . For simplicity, we define
Let us consider the following time fractional order Keller–Segel problem.
Thus, the right-hand sides, f and g are determined from the choice for u and v.
Example 1.
Assume that the domain , we then consider the smooth solutions are given by
Taking the finial time and the time mesh parameter , the numerical solution and exact solution are shown in Figure 1, which are consistent. Here, we mainly consider the situation of . In Table 1, the spatial error convergence orders of are approximately 2 and 1 in the norm and the norm, respectively, which is consistent with Theorem 2. In addition, we provide the time error results of in the norm in Table 2. From the results, it can be seen that the error convergence order is close to 2, which is consistent with Theorem 3.
Figure 1.
The comparison figures of the exact solution and the numerical solution with N = 100, for Example 1.
Table 1.
The spatial errors and convergence orders with the time steps for Example 1.
Table 2.
The time errors and convergence orders with the spatial mesh size for Example 1.
Finally, we provide a computing time comparison between the L2-1σ scheme and the fast L2-1σ scheme in Table 3, and we can see that the fast algorithm requires significantly less computation time.
Table 3.
The computation time of the L2-1σ/FEM and the fast L2-1σ/FEM scheme with , for Example 1.
Example 2.
Assume that the domain ; we then consider the non-smooth solutions are given by
and
where and .
In the same way, we take the finial time T = 1 × 10−3 and the time mesh parameter . From Figure 2, it can be seen that the numerical solution is consistent with the exact solution. Based on the results in Table 4, we can also achieve the convergence orders of the second order and the first order in the norm and norm for the case of the non-smooth solutions. By comparing the data in Table 2, Table 5, and Table 6, it can be concluded that for the case of the non-smooth solutions, a finer spatial mesh discretization is required to achieve a temporal convergence order close to 2.
Figure 2.
The comparison figures of the exact solution and the numerical solution for , for Example 2.
Table 4.
The spatial errors and convergence orders with the time steps for Example 2.
Table 5.
The time errors and convergence orders with the spatial mesh size for Example 2.
Table 6.
The time errors and convergence orders with the spatial mesh size for Example 2.
6. Conclusions
This work presents present a fast L2-1σ/FEM scheme for solving the time fractional Keller–Segel equations with weakly singular solutions. Based on an improved fractional Grönwall inequality, we establish stability and the robust error estimates for the numerical formats. Finally, some numerical examples are presented to illustrate the reliability of our algorithms and the correctness of our theoretical results. However, there are still some minor flaws here, such as the small final time of our numerical simulation. For this problem, we will further study the blow-up of the numerical solution to derive a long-term numerical simulation.
Author Contributions
Conceptualization, Q.L. and J.X.; methodology, Q.L. and J.X.; software, Q.L. and S.C.; validation, Q.L.; formal analysis, Q.L. and J.X.; investigation, Q.L.; writing—original draft preparation, Q.L. and J.X.; writing—review and editing, Q.L.; funding acquisition, Q.L. All authors have read and agreed to the published version of the manuscript.
Funding
This work is supported by the Educational Commission Science Programm of Jiangxi Province (GJJ2201245) and the Natural Science Foundation of Jiangxi Province (20242BAB20007).
Data Availability Statement
The data that support the findings of this study are available from the corresponding author upon reasonable request.
Conflicts of Interest
The authors declare no competing interests.
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