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Computation, Volume 2, Issue 3

September 2014 - 4 articles

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Articles (4)

  • Article
  • Open Access
9 Citations
9,891 Views
19 Pages

On Mechanistic Modeling of Gene Content Evolution: Birth-Death Models and Mechanisms of Gene Birth and Gene Retention

  • Ashley I. Teufel,
  • Jing Zhao,
  • Malgorzata O'Reilly,
  • Liang Liu and
  • David A. Liberles

28 August 2014

Characterizing the mechanisms of duplicate gene retention using phylogenetic methods requires models that are consistent with different biological processes. The interplay between complex biological processes and necessarily simpler statistical model...

  • Article
  • Open Access
11 Citations
7,114 Views
10 Pages

Investigation of the Ergopeptide Epimerization Process

  • Karsten Andrae,
  • Stefan Merkel,
  • Vedat Durmaz,
  • Konstantin Fackeldey,
  • Robert Köppen,
  • Marcus Weber and
  • Matthias Koch

8 August 2014

Ergopeptides, like ergocornine and a-ergocryptine, exist in an S- and in an R-configuration. Kinetic experiments imply that certain configurations are preferred depending on the solvent. The experimental methods are explained in this article. Further...

  • Article
  • Open Access
10 Citations
6,274 Views
19 Pages

Cultural Collapse and System Survival Due to Environmental Modification

  • Graeme J. Ackland,
  • Adrien Y. M. Henry,
  • Alexander Williams and
  • Morrel H. Cohen

We consider a simple mathematical approach to the rise and fall of societies based on population growth and its effects on the environment, both beneficial and detrimental. We find that in any simple model of population dynamics with environmental co...

  • Article
  • Open Access
6 Citations
7,717 Views
22 Pages

A key to semantic analysis is a precise and practically useful definition of meaning that is general for all domains of knowledge. We previously introduced the notion of weak semantic map: a metric space allocating concepts along their most general (...

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Computation - ISSN 2079-3197Creative Common CC BY license