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Genes, Volume 12, Issue 1

January 2021 - 125 articles

Cover Story: A portrait of the current state of biomarker knowledge for clinical management of cancer patients. Tumor therapy based on personalized treatment options could improve the overall survival of cancer patients. Knowledge about biomarkers is a prerequisite for using personalized treatment such as immune-based therapies or targeted drugs. Due to unprecedented technological developments, coupled with novel holistic approaches in translational research, a multitude of biomarkers at genomic, transcriptomic, proteomic, and immunologic levels have been discovered. One example is the different immune milieu for microsatellite instable (MSI) and microsatellite stabile (MSS) pancreatic cancer. The differences in PD-L1 expression level as well as different number of immune cells in the tumor microenvironment of the two groups of pancreatic cancer are the reason pancreatic cancer patients with MSI react differently to chemotherapy. View this paper
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Articles (125)

  • Article
  • Open Access
5 Citations
5,235 Views
21 Pages

An 8.22 Mb Assembly and Annotation of the Alpaca (Vicugna pacos) Y Chromosome

  • Matthew J. Jevit,
  • Brian W. Davis,
  • Caitlin Castaneda,
  • Andrew Hillhouse,
  • Rytis Juras,
  • Vladimir A. Trifonov,
  • Ahmed Tibary,
  • Jorge C. Pereira,
  • Malcolm A. Ferguson-Smith and
  • Terje Raudsepp

16 January 2021

The unique evolutionary dynamics and complex structure make the Y chromosome the most diverse and least understood region in the mammalian genome, despite its undisputable role in sex determination, development, and male fertility. Here we present th...

  • Article
  • Open Access
11 Citations
2,814 Views
11 Pages

15 January 2021

Circular RNA (circRNA) is a new class of non-coding RNA that is structured into a closed loop without polyadenylation. Recent studies showed that circRNAs are involved in the host immune response to pathogen infection. Japanese flounder (Paralichthys...

  • Article
  • Open Access
13 Citations
5,277 Views
14 Pages

WNT-FRIZZLED-LRP5/6 Signaling Mediates Posterior Fate and Proliferation during Planarian Regeneration

  • Eudald Pascual-Carreras,
  • Miquel Sureda-Gómez,
  • Ramon Barrull-Mascaró,
  • Natàlia Jordà,
  • Maria Gelabert,
  • Pablo Coronel-Córdoba,
  • Emili Saló and
  • Teresa Adell

15 January 2021

An organizer is defined as a group of cells that secrete extracellular proteins that specify the fate of surrounding cells according to their concentration. Their function during embryogenesis is key in patterning new growing tissues. Although organi...

  • Article
  • Open Access
12 Citations
3,494 Views
11 Pages

15 January 2021

The LBD (Lateral Organ Boundaries Domain) family are a new group of plant-specific genes, which encode a class of transcription factors containing conserved Lateral Organization Boundary (LOB) domains, and play an important role in regulating the ada...

  • Review
  • Open Access
29 Citations
8,369 Views
14 Pages

Genetics of Peripartum Cardiomyopathy: Current Knowledge, Future Directions and Clinical Implications

  • Timothy F. Spracklen,
  • Graham Chakafana,
  • Peter J. Schwartz,
  • Maria-Christina Kotta,
  • Gasnat Shaboodien,
  • Ntobeko A. B. Ntusi and
  • Karen Sliwa

15 January 2021

Peripartum cardiomyopathy (PPCM) is a condition in which heart failure and systolic dysfunction occur late in pregnancy or within months following delivery. Over the last decade, genetic advances in heritable cardiomyopathy have provided new insights...

  • Article
  • Open Access
24 Citations
5,021 Views
15 Pages

15 January 2021

There is growing attention given to gene flow between crops and the wild relatives as global landscapes have been rapidly converted into agricultural farm fields over the past century. Crop-to-wild introgression may advance the extinction risks of ra...

  • Article
  • Open Access
4 Citations
3,583 Views
10 Pages

Sequencing Red Fox Y Chromosome Fragments to Develop Phylogenetically Informative SNP Markers and Glimpse Male-Specific Trans-Pacific Phylogeography

  • Benjamin N. Sacks,
  • Zachary T. Lounsberry,
  • Halie M. Rando,
  • Kristopher Kluepfel,
  • Steven R. Fain,
  • Sarah K. Brown and
  • Anna V. Kukekova

14 January 2021

The red fox (Vulpes vulpes) has a wide global distribution with many ecotypes and has been bred in captivity for various traits, making it a useful evolutionary model system. The Y chromosome represents one of the most informative markers of phylogeo...

  • Article
  • Open Access
39 Citations
6,001 Views
14 Pages

14 January 2021

Environmental contamination by petroleum hydrocarbons is of concern due to the carcinogenicity and neurotoxicity of these compounds. Successful bioremediation of organic contaminants requires bacterial populations with degradative capacity for these...

  • Article
  • Open Access
33 Citations
4,910 Views
13 Pages

Inhibition of the Lipid Droplet–Peroxisome Proliferator-Activated Receptor α Axis Suppresses Cancer Stem Cell Properties

  • Kenta Kuramoto,
  • Masahiro Yamamoto,
  • Shuhei Suzuki,
  • Keita Togashi,
  • Tomomi Sanomachi,
  • Chifumi Kitanaka and
  • Masashi Okada

14 January 2021

Cancer stem cells (CSCs), having both self-renewal and tumorigenic capacity, utilize an energy metabolism system different from that of non-CSCs. Lipid droplets (LDs) are organelles that store neutral lipids, including triacylglycerol. Previous studi...

  • Article
  • Open Access
37 Citations
8,404 Views
30 Pages

The Impacts of Dam Construction and Removal on the Genetics of Recovering Steelhead (Oncorhynchus mykiss) Populations across the Elwha River Watershed

  • Alexandra K. Fraik,
  • John R. McMillan,
  • Martin Liermann,
  • Todd Bennett,
  • Michael L. McHenry,
  • Garrett J. McKinney,
  • Abigail H. Wells,
  • Gary Winans,
  • Joanna L. Kelley and
  • George R. Pess
  • + 1 author

13 January 2021

Dam construction and longitudinal river habitat fragmentation disrupt important life histories and movement of aquatic species. This is especially true for Oncorhynchus mykiss that exhibits both migratory (steelhead) and non-migratory (resident rainb...

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Genes - ISSN 2073-4425