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15 pages, 961 KB  
Article
Night-Time Biomass and Compositional Dynamics in Chlorella vulgaris: Optimisation of Harvesting Time
by Sofia Pires, Susana Casal, Tânia G. Tavares, José C. M. Pires and Joana Oliveira
BioTech 2026, 15(3), 64; https://doi.org/10.3390/biotech15030064 - 6 Aug 2026
Viewed by 506
Abstract
Global population growth has emphasised the need to have sustainable and alternative sources of nutrients. In this context, microalgae have emerged as a potential solution due to their rich biochemical composition, including high-quality proteins, carbohydrates, lipids, and pigments. This study investigates the variation [...] Read more.
Global population growth has emphasised the need to have sustainable and alternative sources of nutrients. In this context, microalgae have emerged as a potential solution due to their rich biochemical composition, including high-quality proteins, carbohydrates, lipids, and pigments. This study investigates the variation in microalgal growth and biochemical composition over a light:dark cycle, with a focus on the night period. Batch experiments were performed with eight Chlorella vulgaris cultures over a 7-day period. On the seventh day, biomass samples were collected at four time points in four-hour intervals and stored for subsequent biochemical analyses. During the eight-hour dark period, biomass, carbohydrate, and total chlorophyll concentrations decreased by 9%, 12.5%, and 14.4%, respectively. After four hours of light exposure, these parameters increased significantly by 6%, 15.4%, and 12.7%, respectively. Total protein, carotenoids, and fatty acid contents remained relatively stable throughout the evaluated cycle, although variations were observed in the carotenoid profile. During the dark phase, zeaxanthin decreased by 38.0%, whereas violaxanthin increased by 27.2%, suggesting complementary pigment interconversion consistent with xanthophyll cycle activity. Overall, these results highlight the importance of optimising harvesting time to enhance the production of target compounds in a sustainable production of microalgal biomass. Full article
(This article belongs to the Section Environmental Biotechnology)
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20 pages, 7145 KB  
Article
Unraveling the Metabolic Basis of Quality Divergence in White and Yellow Qamgur (Brassica rapa L.) During Growth Through Comparative Metabolomics
by Peng Wu, Tong Zhao, Maerhaba Paerhati, Jianhan Xu, Jing An, Weiqiang Li, Xuexia Yuan, Jingxiu Bi, Rui Gao, Haining Hao, Changying Guo, Pingxiang Liu, Jingrong Zhu and Yutao Wang
Foods 2026, 15(15), 2656; https://doi.org/10.3390/foods15152656 - 28 Jul 2026
Viewed by 330
Abstract
Qamgur is a widely consumed vegetable and is also used in traditional medicine because of its extensive health benefits. White and yellow are the two main varieties. However, the mechanisms underlying quality development in these varieties, particularly in yellow Qamgur, remain unclear. This [...] Read more.
Qamgur is a widely consumed vegetable and is also used in traditional medicine because of its extensive health benefits. White and yellow are the two main varieties. However, the mechanisms underlying quality development in these varieties, particularly in yellow Qamgur, remain unclear. This study compared nutritional and functional components throughout development. Total phenols and total isothiocyanates showed similar trends and levels in both varieties, whereas total free amino acids showed related but distinct patterns. Yellow Qamgur accumulated significantly higher levels of carotenoids. The integrated use of widely targeted and targeted metabolomics revealed stage-specific metabolites. White Qamgur showed stronger enrichment in secondary metabolite pathways, such as anthocyanin, flavonoid, steroid, terpenoid, and phenylpropanoid biosynthesis. In contrast, yellow Qamgur showed stronger enrichment in primary metabolic pathways, including amino acid biosynthesis. In addition, carotenoid biosynthesis may be the primary pathway responsible for the yellow coloration. Carotenoid profiling revealed that lycopene (28.94 mg/kg) was the predominant carotenoid in yellow Qamgur, followed by violaxanthin, γ-carotene, phytoene, β-cryptoxanthin laurate, and β-carotene. Full article
(This article belongs to the Section Foodomics)
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19 pages, 2397 KB  
Article
Comparative Analysis of Phytochemical Composition and Antioxidant Activity of Sprouts from Eight Hemp (Cannabis sativa L.) Genotypes
by Romina Beleggia, Valentina Giovanniello, Serafino Suriano and Daniela Trono
Foods 2026, 15(14), 2552; https://doi.org/10.3390/foods15142552 - 20 Jul 2026
Viewed by 509
Abstract
Hemp sprouts are emerging as a potential functional food, although their phytochemical composition remains poorly characterized. The study investigated the effect of genotype on growth, phytochemical accumulation, and antioxidant activity in four-day-old sprouts from eight hemp genotypes: Carmagnola Selezionata (CS), Fibrante, Carmaleonte, Codimono, [...] Read more.
Hemp sprouts are emerging as a potential functional food, although their phytochemical composition remains poorly characterized. The study investigated the effect of genotype on growth, phytochemical accumulation, and antioxidant activity in four-day-old sprouts from eight hemp genotypes: Carmagnola Selezionata (CS), Fibrante, Carmaleonte, Codimono, Futura 75, USO 31, Felsinea, and Santhica 27. An integrated approach combining spectrophotometric assays, HPLC, and GC-MS analyses was used. Sprout length showed limited variability across genotypes, whereas biomass accumulation varied markedly, with CS, Fibrante, Felsinea, and Santhica 27 exhibiting the highest fresh and dry weights, and Carmaleonte and Codimono the lowest. Phytosterols (46.3%) and phenolics (33.9%) represented the predominant classes, followed by tocols (17.3%) and carotenoids (2.5%), whereas terpenes occurred only in traces (0.1%) and cannabinoids were not detected in any genotype. Fibrante, Futura 75, and Santhica 27 accumulated comparatively higher levels of several bioactive classes among the genotypes investigated, whereas the remining genotypes displayed more selective enrichment patterns. In particular, Fibrante, Futura 75, and Santhica 27 showed the highest accumulation of phenolics, particularly kaempferol-3-O-rutinoside, apigenin-7-O-glucoside, vitexin, isovitexin, and gallic acid, together with elevated levels of tocopherols and phytosterols. Fibrante also exhibited the highest carotenoid levels, particularly lutein and violaxanthin, and the highest antioxidant activity. CS, Codimono, USO 31, and Felsinea generally showed lower metabolite accumulation, although they maintained a moderate accumulation of specific lipid-soluble antioxidants and terpenes. Carmaleonte displayed the lowest levels across most metabolites. Overall, among the analyzed genotypes, Fibrante, followed by Santhica 27 and Futura 75, exhibited the most favorable combination of phytochemical composition and biomass production, making these genotypes promising candidates for further studies in the field of functional foods. Full article
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15 pages, 889 KB  
Article
Papaya (Carica papaya L.) Peel as a Sustainable Source of Vision-Related Carotenoids Through Green Extraction Optimization
by Noreima Barroso-Torres, M. Gloria Lobo and Eva Dorta
Molecules 2026, 31(13), 2253; https://doi.org/10.3390/molecules31132253 - 26 Jun 2026
Viewed by 550
Abstract
Agro-industrial by-products represent a sustainable and underutilized source of bioactive compounds with potential applications in human health. Among them, papaya (Carica papaya L.) peel, typically discarded during industrial processing, constitutes a promising and underexploited matrix for carotenoid recovery and valorization. In this [...] Read more.
Agro-industrial by-products represent a sustainable and underutilized source of bioactive compounds with potential applications in human health. Among them, papaya (Carica papaya L.) peel, typically discarded during industrial processing, constitutes a promising and underexploited matrix for carotenoid recovery and valorization. In this study, different extraction strategies were evaluated and compared to identify the most efficient approach for carotenoid recovery. Total carotenoid contents of 7.13 ± 0.32, 5.35 ± 0.24, and 4.44 ± 0.38 µg β-carotene/100 g dry weight (DW) were obtained, respectively. The conventional extraction was further optimized using response surface methodology (RSM) to maximize carotenoid recovery and antioxidant activity. The extracts obtained under the optimized conditions were characterized by spectrophotometric analysis, HPLC-DAD, and in vitro antioxidant assays (DPPH and ORAC-FL), exhibiting antioxidant capacities of 528.4 ± 43.3 µmol TE/100 g DW and 5.0 ± 0.5 mmol TE/100 g DW, respectively. The carotenoid profile revealed lutein as the predominant compound (1414.28 µg/100 g fresh weight (FW)), followed by violaxanthin (629.55 µg/100 g FW), zeaxanthin (624.58 µg/100 g FW), β-cryptoxanthin (531.23 µg/100 g FW), and β-carotene (278.82 µg/100 g FW), while lycopene was not detected. The predominance of xanthophylls, particularly lutein, highlights the potential of papaya peel as a source of carotenoids that have been associated with visual health in previous studies, supported by its significant antioxidant activity. Overall, papaya peel is confirmed as a valuable and sustainable source of carotenoids, particularly xanthophylls associated with visual health, supporting its potential use in the development of functional ingredients. These findings contribute to circular economy strategies and support the sustainable production of bioactive compounds with potential applications in functional food and nutraceutical formulations. Full article
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24 pages, 9738 KB  
Article
Protective Effects of Violaxanthin on Cellular Oxidative Stress via NRF2 Activation in H2O2-Stimulated Human Keratinocytes
by Ji-Seon Kim, Hee Su Kim, Hee-Jae Shin, Seokmuk Park, Ji Won Kim, Su-Bin Park, Hee-Sik Kim, Yong Jae Lee and Seunghee Bae
Appl. Sci. 2026, 16(10), 5132; https://doi.org/10.3390/app16105132 - 21 May 2026
Viewed by 690
Abstract
Excessive accumulation of reactive oxygen species from exogenous and endogenous stressors can cause cellular damage. Chlorella contains diverse bioactive compounds, and violaxanthin, a major carotenoid pigment found in Chlorella sp. HS-V, has been reported to possess anti-inflammatory, anticancer, and antioxidant properties. We investigated [...] Read more.
Excessive accumulation of reactive oxygen species from exogenous and endogenous stressors can cause cellular damage. Chlorella contains diverse bioactive compounds, and violaxanthin, a major carotenoid pigment found in Chlorella sp. HS-V, has been reported to possess anti-inflammatory, anticancer, and antioxidant properties. We investigated the effect of violaxanthin on hydrogen peroxide (H2O2)-induced oxidative stress in human keratinocytes. Chlorella sp. HS-V extract significantly restored the H2O2-induced decrease in cell viability. Similarly, violaxanthin reduced H2O2-induced cytotoxicity and intracellular reactive oxygen species levels, which was associated with the upregulation of antioxidant enzyme expression. Under H2O2-induced oxidative stress conditions, violaxanthin may enhance cellular antioxidant defense by promoting nuclear factor erythroid 2-related factor 2 (NRF2) translocation through the phosphoinositide 3-kinase/protein kinase B/glycogen synthase kinase 3β (PI3K/AKT/GSK3β) signaling pathway. Additionally, violaxanthin improved H2O2-impaired wound healing in HaCaT human keratinocyte cells and reduced senescence-associated beta-galactosidase-positive normal human epidermal keratinocytes. Overall, these findings suggest that violaxanthin may serve as a potential therapeutic agent for mitigating oxidative stress-induced cellular dysfunction. Full article
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21 pages, 3672 KB  
Article
Bioactive Compounds from Microalgae and Cyanobacteria: Evaluation of Their Antioxidant and Antimicrobial Activities
by Bruna de Falco, Carlos José Martel-Benítez, Carlos Almeida, Attilio Anzano, Francesco Pisapia, José Luis Martín-Barrasa, Antera Martel Quintana and Juan Luis Gómez-Pinchetti
Mar. Drugs 2026, 24(5), 171; https://doi.org/10.3390/md24050171 - 9 May 2026
Viewed by 1843
Abstract
Microalgae hold great potential towards pharmaceutical and nutraceutical sectors due to their substantial content of highly functional bioactive compounds. To assess their potential as a sustainable source of valuable products, 10 cyanobacterial and 10 eukaryotic microalgal strains belonging to different taxonomic groups (Chlorophyta, [...] Read more.
Microalgae hold great potential towards pharmaceutical and nutraceutical sectors due to their substantial content of highly functional bioactive compounds. To assess their potential as a sustainable source of valuable products, 10 cyanobacterial and 10 eukaryotic microalgal strains belonging to different taxonomic groups (Chlorophyta, Cyanophyta, Euglenophyta, Heterokontophyta and Rhodophyta) were screened for their biochemical profile, antioxidant and antimicrobial activity against Staphylococcus aureus. Total phenol content and antioxidant activity were positively correlated (r = 0.69, p < 0.01), with the highest values observed in Euglena cantabrica, Haematococcus pluvialis, and Chrysoreinhardia giraudii. HPLC-PAD pigment analysis revealed species-specific profiles, with β,β-carotene as major carotenoid in most cyanobacteria, whereas neoxanthin, violaxanthin and lutein were predominantly present in Chlorophyta, and fucoxanthin was the main carotenoid in C. giraudii, Entomoneis sp. and Isochrysis galbana. Protein content ranged from 9.2 ± 0.4% to 57.6 ± 0.5% with the highest levels in the cyanobacteria Microcystis aeruginosa, Nostoc sp., Cylindrospermum stagnale, Anabaena minutissima, and Arthrospira platensis. Multivariate analysis differentiated cyanobacteria and eukaryotes based on their fatty acid profiles. Organic extracts from 15 species showed inhibitory effects against S. aureus with MIC50 < 1024 µg/mL. The eukaryotes Entomoneis sp., C. giraudii, I. galbana, Picochlorum sp. and the cyanobacteria C. stagnale and Nodularia sp. exhibited the strongest inhibitory effects on bacterial growth. In conclusion, E. cantabrica and C. giraudii stood out for their high antioxidant activity and significant antimicrobial effects, respectively, highlighting their potential as valuable sources of bioactive compounds. Full article
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16 pages, 2791 KB  
Article
Gene-Editing-Mediated Enhancement of Carotenoid Compound Accumulation in Common Wheat Grains
by Yajie Guo, Mengtian Liu, Mengyao Li, Dan Wang and Huiyun Liu
Foods 2026, 15(5), 817; https://doi.org/10.3390/foods15050817 - 27 Feb 2026
Cited by 1 | Viewed by 818
Abstract
Common wheat (Triticum aestivum L.) is a staple food crop for humans, yet it primarily accumulates the non-provitamin A carotenoid lutein and exhibits limited natural variation in provitamin A β-carotene among its various accessions. This characteristic necessitates the development of alternative strategies [...] Read more.
Common wheat (Triticum aestivum L.) is a staple food crop for humans, yet it primarily accumulates the non-provitamin A carotenoid lutein and exhibits limited natural variation in provitamin A β-carotene among its various accessions. This characteristic necessitates the development of alternative strategies for provitamin A biofortification. To address this challenge, we targeted key control points in the carotenoid biosynthetic pathway using the CRISPR-Cas9 system in a wheat cultivar Fielder. Specifically, we knocked out the gene encoding lycopene ε-cyclase (LCYE), an enzyme that acts as a gatekeeper opposing the production of β-branch carotenoids. Biochemical analysis of homozygous transgene-free mutant endosperms at 20 days post-anthesis (DPA) revealed marked metabolic rerouting of carotenoid biosynthesis, characterized by differential, line-specific accumulation patterns. Provitamin A carotenoids—specifically β-carotene—increased by 26.1–34.5% relative to wild-type controls, concomitant with elevated 22.9–125.4% for zeaxanthin, 41.6–73.9% for violaxanthin, and 26.2–186.5% for antheraxanthin. However, these gains were offset by drastic lutein reduction in lines 1–4 and 5–1. Consequently, total carotenoid levels displayed non-uniform responses, with line 5–1 exhibiting a modest decrease relative to wild-type. Moreover, the mutant lines exhibited elevated levels of amylose and soluble sugar, and the seed coats and endosperms of the triple homozygous transgene-free mutant lines exhibited an orange-yellow hue. In conclusion, we have successfully developed novel carotenoids biofortified wheat lines through a gene-editing approach. This study demonstrates targeted redirection of carotenoid biosynthesis via gene editing as an effective strategy to enhance the nutritional value of commercial wheat and mitigate micronutrient deficiencies in modern food systems. Full article
(This article belongs to the Section Grain)
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12 pages, 2255 KB  
Article
Chemical Characterization and Antiproliferative Evaluation of Compounds Isolated from White Shrimp (Penaeus vannamei) By-Products
by Héctor Enrique Trujillo-Ruiz, Dania Guadalupe Leal-Rodríguez, Hisila del Carmen Santacruz-Ortega, Oliviert Martínez-Cruz, Sandra Carolina De La Reé-Rodríguez, Armando Burgos-Hernández, Erika Silva-Campa, Ángel Antonio Carbonell-Barrachina and Carmen María López-Saiz
Biophysica 2026, 6(2), 17; https://doi.org/10.3390/biophysica6020017 - 25 Feb 2026
Cited by 1 | Viewed by 1220
Abstract
Cancer is the second leading cause of death worldwide, requiring more effective treatments. By-products from the white shrimp (Penaeus vannamei) are a promising source of bioactive compounds. Compounds with antiproliferative activity were isolated and identified in exoskeleton and cephalothorax extracts. The [...] Read more.
Cancer is the second leading cause of death worldwide, requiring more effective treatments. By-products from the white shrimp (Penaeus vannamei) are a promising source of bioactive compounds. Compounds with antiproliferative activity were isolated and identified in exoskeleton and cephalothorax extracts. The hexane extract of the exoskeleton reduced the viability of Human Prostate Carcinoma cell line (22Rv1) to 40.6% without toxicity in Adult Retinal Pigment Epithelium-19 (ARPE-19). Among the 19 fractions obtained, H3 reduced cell viability to 20.78%. Spectroscopic analysis identified bis(2-ethylhexyl) terephthalate, neoxanthin, and violaxanthin. Fluorescence microscopy showed morphological alterations. These findings demonstrate in vitro antiproliferative activity of compounds derived from shrimp by-products and support further studies to elucidate their mechanisms of action and evaluate their potential relevance in cancer prevention or therapeutic research. Full article
(This article belongs to the Special Issue Biophysical Methods to Study Membrane Models, Cells, and Tissues)
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23 pages, 359 KB  
Article
Effect of Freeze Drying, Hot Air Drying, and Hot Air Drying Preceded by Freezing on Phytochemical Composition, Antioxidant Capacity, and Technological Properties of Mango Peels
by Sara Marçal, Ana A. Vilas-Boas, Débora A. Campos and Manuela Pintado
Foods 2026, 15(2), 333; https://doi.org/10.3390/foods15020333 - 16 Jan 2026
Cited by 6 | Viewed by 2284
Abstract
Mango peels have great potential for upcycling in the food industry. This study addressed important knowledge gaps regarding mango peel drying, namely, the effect of drying on mango peels’ bound phenolics, and the impact of prior freezing on the composition of hot air-dried [...] Read more.
Mango peels have great potential for upcycling in the food industry. This study addressed important knowledge gaps regarding mango peel drying, namely, the effect of drying on mango peels’ bound phenolics, and the impact of prior freezing on the composition of hot air-dried mango peels. Hence, the effect of freeze drying (FD) (0.10 mbar; −63 °C (condenser temperature); 25 °C (shelf temperature); 96 h), hot air drying (HAD) (65 °C; 48 h), and HAD preceded by freezing (FZ + HAD) (−20 °C; 30 days) on mango peels’ composition, antioxidant capacity, and technological properties was evaluated. Drying did not affect fiber content; however, it caused slight modifications in carbohydrate composition of fiber. Regarding antioxidant compounds, FD, HAD, and FZ + HAD reduced vitamin C by 9%, 53%, and 71%, respectively. FD preserved all free phenolics, while HAD and FZ + HAD decreased most of them, with reductions ranging from 20 to 42% and 17 to 71%, respectively. However, FD, HAD, and FZ + HAD reduced 9, 2, and 6 of the 10 bound phenolics identified, respectively, and decreased their antioxidant capacity. Finally, all identified carotenoids were reduced by FZ + HAD, whereas FD and HAD decreased only violaxanthin. Regarding technological properties, FD showed the highest and lowest oil and water absorption capacities. In conclusion, these findings demonstrated that prior freezing exacerbated the loss of antioxidants during HAD. Full article
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27 pages, 1936 KB  
Review
Bioactive Chemicals and Biological Activity of Tropaeolum majus L. and the Importance of Trichoderma spp. in the Cultivation of This Species
by Sylwia Skazińska, Roman Andrzejak, Katarzyna Waszkowiak and Beata Janowska
Agriculture 2026, 16(1), 101; https://doi.org/10.3390/agriculture16010101 - 31 Dec 2025
Cited by 1 | Viewed by 1928
Abstract
Tropaeolum majus L. is a popular ornamental plant. All parts of T. majus plant (flowers, leaves, and seeds) are edible and are appreciated for their pungent taste, although their chemical composition varies. T. majus is known for its many health benefits. It is [...] Read more.
Tropaeolum majus L. is a popular ornamental plant. All parts of T. majus plant (flowers, leaves, and seeds) are edible and are appreciated for their pungent taste, although their chemical composition varies. T. majus is known for its many health benefits. It is a source of trace elements and bioactive compounds that are easily absorbed by the human body. The flowers of T. majus contain flavonoids from the flavone and flavonol groups, as well as their glycosides, which exhibit antibacterial, antifungal and antiviral activity. They also inhibit the activity of certain enzymes. Among the flavonoids, the flowers and leaves of T. majus contain derivatives of kaempferol and quercetin. Flavonoids also include anthocyanins, which are responsible for the color of T. majus flowers. In red flowers, delphinidin predominates; in orange flowers, pelargonidin; and in yellow flowers, pelargonidin and delphinidin are present in similar amounts. In the flowers of T. majus, seven carotenoids have been identified: violaxanthin, antheraxanthin, lutein, zeaxanthin, α, β and γ-carotene. In the leaves, however, lutein, violaxanthin, β-carotene and neoxanthin were detected. In T. majus, the presence of two glucosinolates has been reported: glucotropaeolin and sinalbin. The flowers and leaves of T. majus also contain both macroelements (N, P, K, Ca, Mg, Na) and microelements (Fe, Mn, Cu, Zn, Mo), and essential oils which have anti-cancer, antibacterial, and antiviral properties. The quality and flowering of T. majus are enhanced by fungi of the Trichoderma genus, which is important both ecologically and in terms of increasing the yield of raw material extracted from the plant. T. aureoviride, T. hamatum, and T. harzianum stimulated the flowering of the T. majus ‘Spitfire’. The plants treated with T. harzianum after being planted in pots flowered the most abundantly. Trichoderma spp. caused the plants to grow more intensively, producing longer and more leafy shoots with a greater number of offshoots. Trichoderma spp. stimulated the uptake of macronutrients, except for P. In the case of Ca and Na, this phenomenon was only observed in plants treated with T. aureoviride and T. hamatum, and for Mg, only when T. hamatum was applied to sown seeds. As for the developed root systems, as far as the micronutrients are concerned, Trichoderma spp. stimulated the uptake of Zn and Mn. Additionally, there was a higher Fe content in the plants treated with T. harzianum on both dates and T. aureoviride after planting the plants in pots. Full article
(This article belongs to the Special Issue The Application of Trichoderma in Crop Production)
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21 pages, 10278 KB  
Article
Transcription Factor TeMADS6 Coregulates Carotenoid Biosynthesis and Chlorophyll Degradation Resulting in Yellow-Green Petal Color of Marigold (Tagetes erecta)
by Chunling Zhang, Ke Zhu, Chujun Huang, Luan Ke, Yafeng Wen, Hang Li, Chaolong Yang, Zhengguo Tao and Yanhong He
Plants 2025, 14(24), 3763; https://doi.org/10.3390/plants14243763 - 10 Dec 2025
Cited by 3 | Viewed by 1399
Abstract
Marigold (Tagetes erecta) is an important ornamental and industrial crop valued for its high lutein content. Although petal pigmentation during inflorescence development involves coordinated chlorophyll degradation and carotenoid biosynthesis, the transcriptional mechanisms regulating these processes remain poorly understood. Here, we identified [...] Read more.
Marigold (Tagetes erecta) is an important ornamental and industrial crop valued for its high lutein content. Although petal pigmentation during inflorescence development involves coordinated chlorophyll degradation and carotenoid biosynthesis, the transcriptional mechanisms regulating these processes remain poorly understood. Here, we identified a MADS-box transcription factor, TeMADS6, that coordinately regulates chlorophyll and carotenoid metabolism in marigold. Constitutive overexpression of TeMADS6 resulted in yellow-green petals. HPLC analysis revealed that lycopene, antheraxanthin, violaxanthin, zeaxanthin, and lutein levels were substantially reduced in TeMADS6-overexpression lines, while chlorophyll content was significantly increased compared with wild-type plants. Transcriptome profiling revealed strong repressions of the carotenoid biosynthetic genes TePSY1 and TeHYDB in transgenic florets. Moreover, the chlorophyll degradation gene TeNYC1 and TePPH2 were significantly downregulated, whereas TeSGR2 was upregulated. Together, these findings demonstrate that TeMADS6 acts as a dual-function transcriptional regulator controlling both chlorophyll degradation and carotenoid biosynthesis. This study provides new genetic resources for manipulating petal color and enhancing lutein accumulation in marigold, and advance understanding of the transcriptional networks orchestrating pigment metabolism during flower development. Full article
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16 pages, 7438 KB  
Article
Integrated Omics Analysis Revealed the Differential Metabolism of Pigments in Three Varieties of Gastrodia elata Bl
by Xiaohua Li, Huaijing Zhu, Bingbing Zhang and Dahui Liu
Int. J. Mol. Sci. 2025, 26(24), 11839; https://doi.org/10.3390/ijms262411839 - 9 Dec 2025
Cited by 1 | Viewed by 909
Abstract
Gastrodia elata Blume is a well-known traditional Chinese medicine. The color of flower and flower stalk are important characteristics in the classification of G. elata. However, the mechanisms of pigment formation in different types of G. elata are not yet elucidated. To [...] Read more.
Gastrodia elata Blume is a well-known traditional Chinese medicine. The color of flower and flower stalk are important characteristics in the classification of G. elata. However, the mechanisms of pigment formation in different types of G. elata are not yet elucidated. To understand this, targeted metabolomics as well as transcriptomics analyses were carried out in this study. The differential accumulation and the typical components of pigments in different types of G. elata were elucidated. According to our research, the accumulation of carotenoids rather than anthocyanins likely contributes to the pigment content in G. elata. The different accumulations of carotenoids including violaxanthin, lycopene, α-carotene, and α-cryptoxanthin are the main reasons that contribute to the color differences in the flowers and flower stalks of these three G. elata varieties. Integrated multi-omics analysis enriched 50 and 17 differential genes in the flavonoid–anthocyanin and carotenoid biosynthesis pathways, respectively. Among these, PSY, PDS, CCD, UGT, and ANR were identified as critical genes responsible for the differential pigment accumulation in G. elata varieties, while the MYB TFs were tightly associated with main genes expression and content of carotenoids. Overall, this study enhances the current understanding of pigments’ metabolites profiles and contributes valuable insights into the molecular mechanisms underlying G. elata carotenoid biosynthesis; these findings also provide valuable guidance for future carotenoid biofortification and molecular breeding in G. elata. Full article
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15 pages, 1789 KB  
Article
Shift in Metabolite Profiling and Mineral Composition of Edible Halophytes Cultivated Hydroponically Under Increasing Salinity
by Giedrė Samuolienė, Audrius Pukalskas and Akvilė Viršilė
Metabolites 2025, 15(11), 724; https://doi.org/10.3390/metabo15110724 - 5 Nov 2025
Viewed by 1118
Abstract
Background: A significant concern today is the dependence on low-quality water sources, such as saline water, in hydroponic systems, especially due to the scarcity of freshwater. Halophytes and salt-tolerant species have emerged as viable candidates for cultivation in saline hydroponics. However, their agronomic [...] Read more.
Background: A significant concern today is the dependence on low-quality water sources, such as saline water, in hydroponic systems, especially due to the scarcity of freshwater. Halophytes and salt-tolerant species have emerged as viable candidates for cultivation in saline hydroponics. However, their agronomic performance and physiological responses within hydroponic systems require further investigation. Objectives: This research aims to explore the potential of edible halophytes grown in saline nutrient solutions within hydroponic systems within salt-tolerant ranges, focusing on their metabolic profiles and mineral accumulation. Methods: Plantago coronopus (L.), Portulaca oleracea (L.), and Salsola komarovii (Iljin) were grown in walk-in controlled environment chambers in deep water culture hydroponic systems, at 0, 50, 100, 150, and 200 mM·L−1 NaCl salinity; 16h, 250 µmol m−2 s−1, and wide LED spectrum lighting was maintained. Results: A significant decrease in organic acids, and fresh and dry weight under high saltinity was observed in Plantago coronopus and Portulaca oleracea, but not in Salsola komarovii. An increase in hexoses, particularly glucose, violaxanthin and β-carotene, P⁺ and Zn2⁺, along with a decrease in lutein, K⁺ and Ca2⁺ levels across salinity levels from 0 to 200 mM NaCl was observed in all treated halophytes. Increased salinity did not significantly affect total protein accumulation. Conclusions: These findings reveal that different shifts in osmolytes, mineral elements, and biomass accumulation in tested halophytes indicate species-dependent osmotic adjustment to increased salinity and may be attributed to the morphological differences among halophytic grasses, dicot halophytes, and those with succulent leaves or stems. The PCA score scatterplot results excluded the response of Plantago coronopus from other tested halophytes; also, it demonstrated that Portulaca oleracea was more sensitive to the hydroponic solution salinity compared to Salsola komarovii and Plantago coronopus. Full article
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15 pages, 3407 KB  
Article
Pigment Extracts of Tetradesmus obliquus, Phaeodactylum tricornutum and Desmodesmus armatus Exert Anti-Adipogenic Effects on Maturing 3T3-L1 Pre-Adipocytes
by Helen Carr-Ugarte, Leixuri Aguirre, María P. Portillo, Gerardo Álvarez-Rivera, Sergio Seoane, Pablo Aramendi and Itziar Eseberri
Int. J. Mol. Sci. 2025, 26(21), 10314; https://doi.org/10.3390/ijms262110314 - 23 Oct 2025
Viewed by 1050
Abstract
Microalgae have attracted the interest of researchers due to their high amounts of bioactive compounds with potential anti-obesity effects. In this context, the aim of this study is to analyse the effects of pigment extracts of Tetradesmus obliquus, Phaeodactylum tricornutum and Desmodesmus [...] Read more.
Microalgae have attracted the interest of researchers due to their high amounts of bioactive compounds with potential anti-obesity effects. In this context, the aim of this study is to analyse the effects of pigment extracts of Tetradesmus obliquus, Phaeodactylum tricornutum and Desmodesmus armatus on triglyceride accumulation in 3T3-L1 pre-adipocytes. Pigments were extracted and the chlorophyll and carotenoid profiles were analysed by HPLC-DAD-APCI-QTOF-MS analysis. Next, the three extracts were tested in maturing 3T3-L1 pre-adipocytes treated during 8 days at doses of 6.25, 12.5, 25 and 50 µg/mL. Cell viability was evaluated and triglyceride content of cells was measured by a commercial kit. Furthermore, adipogenic gene expression was measured in cells treated with the highest dose of the three extracts. The characterisation showed that the predominant pigments in each extract were different among the microalgae, with fucoxanthin being the main one in Phaeodactylum tricornutum and chlorophylls, lutein and violaxanthin/neoxanthin in the other two microalgae. All the tested microalgae extracts reduced triglyceride content of pre-adipocytes, although differing in the minimum effective dose. The underlying mechanism depends on the analysed extract, but the three extracts reduced adipogenesis via Pparg inhibition. In conclusion, the pigment extracts of the three microalgae exert anti-adipogenic effects in 3T3-L1 pre-adipocytes. Full article
(This article belongs to the Section Bioactives and Nutraceuticals)
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Article
Expression Regulatory Mechanisms of the Key Structural Genes in the Carotenoid Biosynthesis Pathway Under Salt Stress of Lycium barbarum
by Zhi-Hang Hu, Li-Xiang Wang, Nan Zhang, Chen Chen, Jing Zhuang, Yue Yin and Ai-Sheng Xiong
Horticulturae 2025, 11(10), 1149; https://doi.org/10.3390/horticulturae11101149 - 24 Sep 2025
Cited by 2 | Viewed by 1513
Abstract
Salt stress is a major abiotic factor limiting wolfberry (Lycium barbarum) growth. As a high-value medicinal and edible crop, wolfberry relies on its carotenoid content, a critical determinant of fruit quality and nutritional value. To elucidate the expression regulatory mechanisms of [...] Read more.
Salt stress is a major abiotic factor limiting wolfberry (Lycium barbarum) growth. As a high-value medicinal and edible crop, wolfberry relies on its carotenoid content, a critical determinant of fruit quality and nutritional value. To elucidate the expression regulatory mechanisms of key genes in the carotenoid biosynthesis pathway under salt stress, this study systematically identified 17 structural genes within the L. barbarum carotenoid pathway using genomic and transcriptomic approaches. Comprehensive analyses were conducted on gene structure, chromosomal distribution, conserved domains, and cis-acting elements. The results revealed that these genes were clustered on chromosomes Chr08 and Chr10 and exhibit strong collinearity with tomato (18 syntenic pairs). Their promoters were enriched with light-responsive (G-box) and stress-responsive (ABRE, DRE) elements. Tissue-specific expression analysis demonstrated high expression in mid-to-late fruit developmental stages (LbaPSY1, LbaPDS) and in photoprotective genes (LbaZEP, LbaVDE) in leaves. Under 300 mM NaCl stress treatment, the genes exhibited a staged response: Early stage (1–3 h): upstream MEP pathway genes (LbaDXS, LbaGGPS) were rapidly induced to supply precursors. Mid-stage (6–12 h): midstream genes (LbaPSY, LbaPDS, LbaZDS) were continuously upregulated, promoting lycopene synthesis and preferentially activating the β-branch (LbaLCYB). Late stage (12–24 h): downstream xanthophyll cycle genes (LbaBCH, LbaZEP, LbaVDE) were significantly enhanced, facilitating the accumulation of antioxidant compounds like violaxanthin and neoxanthin. This coordinated regulation formed a synergistic “precursor supply–antioxidant product” network. This study revealed the phased and coordinated regulatory network of carotenoid biosynthesis genes under salt stress in L. barbarum. It also provided potential target genes for the new cultivar selection with enhanced salt tolerance and nutritional quality. Full article
(This article belongs to the Special Issue New Insights into Protected Horticulture Stress)
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