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Keywords = soil microbial biomass carbon

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23 pages, 3221 KiB  
Article
Drought Modulates Root–Microbe Interactions and Functional Gene Expression in Plateau Wetland Herbaceous Plants
by Yuanyuan Chen, Shishi Feng, Qianmin Liu, Di Kang and Shuzhen Zou
Plants 2025, 14(15), 2413; https://doi.org/10.3390/plants14152413 - 4 Aug 2025
Viewed by 147
Abstract
In plateau wetlands, the interactions of herbaceous roots with ectorhizosphere soil microorganisms represent an important way to realize their ecological functions. Global change-induced aridification of plateau wetlands has altered long-established functional synergistic relationships between plant roots and ectorhizosphere soil microbes, but we still [...] Read more.
In plateau wetlands, the interactions of herbaceous roots with ectorhizosphere soil microorganisms represent an important way to realize their ecological functions. Global change-induced aridification of plateau wetlands has altered long-established functional synergistic relationships between plant roots and ectorhizosphere soil microbes, but we still know little about this phenomenon. In this context, nine typical wetlands with three different moisture statuses were selected from the eastern Tibetan Plateau in this study to analyze the relationships among herbaceous plant root traits and microbial communities and functions. The results revealed that drought significantly inhibited the accumulation of root biomass and surface area as well as the development of root volumes and diameters. Similarly, drought significantly reduced the diversity of ectorhizosphere soil microbial communities and the relative abundances of key phyla of archaea and bacteria. Redundancy analysis revealed that plant root traits and ectorhizosphere soil microbes were equally regulated by soil physicochemical properties. Functional genes related to carbohydrate metabolism were significantly associated with functional traits related to plant root elongation and nutrient uptake. Functional genes related to carbon and energy metabolism were significantly associated with traits related to plant root support and storage. Key genes such as CS,gltA, and G6PD,zwf help to improve the drought resistance and barrenness resistance of plant roots. This study helps to elucidate the synergistic mechanism of plant and soil microbial functions in plateau wetlands under drought stress, and provides a basis for evolutionary research and conservation of wetland ecosystems in the context of global change. Full article
(This article belongs to the Special Issue Soil-Beneficial Microorganisms and Plant Growth: 2nd Edition)
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20 pages, 2782 KiB  
Article
Urban Forest Fragmentation Reshapes Soil Microbiome–Carbon Dynamics
by Melinda Haydee Kovacs, Nguyen Khoi Nghia and Emoke Dalma Kovacs
Diversity 2025, 17(8), 545; https://doi.org/10.3390/d17080545 - 1 Aug 2025
Viewed by 192
Abstract
Urban expansion fragments once-contiguous forest patches, generating pronounced edge gradients that modulate soil physicochemical properties and biodiversity. We quantified how fragmentation reshaped the soil microbiome continuum and its implications for soil carbon storage in a temperate urban mixed deciduous forest. A total of [...] Read more.
Urban expansion fragments once-contiguous forest patches, generating pronounced edge gradients that modulate soil physicochemical properties and biodiversity. We quantified how fragmentation reshaped the soil microbiome continuum and its implications for soil carbon storage in a temperate urban mixed deciduous forest. A total of 18 plots were considered in this study, with six plots for each fragment type. Intact interior forest (F), internal forest path fragment (IF), and external forest path fragment (EF) soils were sampled at 0–15, 15–30, and 30–45 cm depths and profiled through phospholipid-derived fatty acid (PLFA) chemotyping and amino sugar proxies for living microbiome and microbial-derived necromass assessment, respectively. Carbon fractionation was performed through the chemical oxidation method. Diversity indices (Shannon–Wiener, Pielou evenness, Margalef richness, and Simpson dominance) were calculated based on the determined fatty acids derived from the phospholipid fraction. The microbial biomass ranged from 85.1 to 214.6 nmol g−1 dry soil, with the surface layers of F exhibiting the highest values (p < 0.01). Shannon diversity declined systematically from F > IF > EF. The microbial necromass varied from 11.3 to 23.2 g⋅kg−1. Fragmentation intensified the stratification of carbon pools, with organic carbon decreasing by approximately 14% from F to EF. Our results show that EFs possess a declining microbiome continuum that weakens their carbon sequestration capacity in urban forests. Full article
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16 pages, 2656 KiB  
Article
Plastic Film Mulching Regulates Soil Respiration and Temperature Sensitivity in Maize Farming Across Diverse Hydrothermal Conditions
by Jianjun Yang, Rui Wang, Xiaopeng Shi, Yufei Li, Rafi Ullah and Feng Zhang
Agriculture 2025, 15(15), 1667; https://doi.org/10.3390/agriculture15151667 - 1 Aug 2025
Viewed by 205
Abstract
Soil respiration (Rt), consisting of heterotrophic (Rh) and autotrophic respiration (Ra), plays a vital role in terrestrial carbon cycling and is sensitive to soil temperature and moisture. In dryland agriculture, plastic film mulching (PM) is widely used to regulate soil hydrothermal conditions, but [...] Read more.
Soil respiration (Rt), consisting of heterotrophic (Rh) and autotrophic respiration (Ra), plays a vital role in terrestrial carbon cycling and is sensitive to soil temperature and moisture. In dryland agriculture, plastic film mulching (PM) is widely used to regulate soil hydrothermal conditions, but its effects on Rt components and their temperature sensitivity (Q10) across regions remain unclear. A two-year field study was conducted at two rain-fed maize sites: Anding (warmer, semi-arid) and Yuzhong (colder, drier). PM significantly increased Rt, Rh, and Ra, especially Ra, due to enhanced root biomass and improved microclimate. Yield increased by 33.6–165%. Peak respiration occurred earlier in Anding, aligned with maize growth and soil temperature. PM reduced Q10 of Rt and Ra in Anding, but only Ra in Yuzhong. Rh Q10 remained stable, indicating microbial respiration was less sensitive to temperature changes. Structural equation modeling revealed that Rt and Ra were mainly driven by soil temperature and root biomass, while Rh was more influenced by microbial biomass carbon (MBC) and dissolved organic carbon (DOC). Despite increased CO2 emissions, PM improved carbon emission efficiency (CEE), particularly in Yuzhong (+67%). The application of PM is recommended to enhance yield while optimizing carbon efficiency in dryland farming systems. Full article
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17 pages, 1200 KiB  
Article
Biochar-Mediated Effects on Changes in Soil Quality and Microbial Communities
by Mingyu Wu, Mengyuan Wang, Wenxuan Shi, Qian Zhang, Tengfei Guo, Peipei Li, Yanlai Han and Hui Li
Agronomy 2025, 15(8), 1861; https://doi.org/10.3390/agronomy15081861 - 31 Jul 2025
Viewed by 171
Abstract
In a greenhouse experiment, we examined the behavior of biochar in arable soil to demonstrate that these supplements can boost soil carbon storage, as well as to track changes in microbial biomass and identify the microbial communities that use these biochars. In order [...] Read more.
In a greenhouse experiment, we examined the behavior of biochar in arable soil to demonstrate that these supplements can boost soil carbon storage, as well as to track changes in microbial biomass and identify the microbial communities that use these biochars. In order to ascertain if biochar can consistently alter soil microbial activities, we studied the impact of biochar combination treatments on 16S rRNA gene diversity. In soil treated with biochar, there was a rise in the relative abundance of taxa belonging to the phyla Actinobacteria and Gemmatimonadetes, despite the overall diversity decreasing with biochar addition. According to all of these observations, pyrogenic carbon has a major effect on the composition of the soil microbial community and enriches keystone taxa within the parent soil microbial community. Certain species experienced increases throughout the biochar-amended incubation period, despite the total diversity declining following biochar amendments. The phyla Actinobacteria and Gemmatimonadetes increased in the relative abundance of bacteria in soil treated with biochar, according to DNA sequencing of these species. In summary, these findings show that biochar significantly impacts the constitution and composition of the soil microbial community and enriches important taxa within the parent soil microbial community. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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24 pages, 2620 KiB  
Review
Formiguer Fertilization: Historical Agricultural Biochar Use in Catalonia and Its Modern-Day Resource Implications
by Nicolas Sesson Farré and Aaron Kinyu Hoshide
Resources 2025, 14(8), 120; https://doi.org/10.3390/resources14080120 - 28 Jul 2025
Viewed by 265
Abstract
Biochar is an amendment that can enhance both soil fertility and sequester carbon. However, its historical applications continue to be underexplored. In this overview, we investigate the formiguer method of burning woody biomass to create agricultural biochar for use as fertilizer in Catalonia, [...] Read more.
Biochar is an amendment that can enhance both soil fertility and sequester carbon. However, its historical applications continue to be underexplored. In this overview, we investigate the formiguer method of burning woody biomass to create agricultural biochar for use as fertilizer in Catalonia, Spain, within the context of historical biochar use. A literature review targeted searches of scholarly databases to compare the formiguer method to Amazonian terra preta and other traditional biochar use. We identified sources covering biochar properties, soil impacts, and historical agricultural practices within the Iberian Peninsula and briefly described the main methods or treatments used during this process. Past research demonstrates that the formiguer method, which involves pyrolytic combustion of biomass within soil mounds, improves microbial activity, increases soil phosphorus and potassium availability from soil structure, and leads to long-term carbon stabilization, even though it can result in short-term decreases in soil organic carbon and nitrogen losses. Despite being abandoned in Europe with the rise of chemical fertilizers, the use of formiguers exemplifies a decentralized approach to nutrient and agroecosystem management. The literature highlights the relevance that these traditional biochar practices can have in informing modern soil management and sustainable agricultural strategies. Understanding the formiguer can offer critical insights to optimize contemporary biochar applications and historical techniques into future sustainability frameworks. Full article
(This article belongs to the Special Issue Resource Extraction from Agricultural Products/Waste: 2nd Edition)
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20 pages, 2984 KiB  
Article
Influence of Rice–Crayfish Co-Culture Systems on Soil Properties and Microbial Communities in Paddy Fields
by Dingyu Duan, Dingxuan He, Liangjie Zhao, Chenxi Tan, Donghui Yang, Wende Yan, Guangjun Wang and Xiaoyong Chen
Plants 2025, 14(15), 2320; https://doi.org/10.3390/plants14152320 - 27 Jul 2025
Viewed by 388
Abstract
Integrated rice–crayfish (Oryza sativaProcambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects [...] Read more.
Integrated rice–crayfish (Oryza sativaProcambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects of the RC systems on soil physicochemical characteristics and microbial dynamics in paddy fields of southern Henan Province, China, over the 2023 growing season and subsequent fallow period. Using a randomized complete design, rice monoculture (RM, as the control) and RC treatments were compared across replicated plots. Soil and water samples were collected post-harvest and pre-transplanting to assess soil properties, extracellular enzyme activity, and microbial community structure. Results showed that RC significantly enhanced soil moisture by up to 30.2%, increased soil porosity by 9.6%, and nearly tripled soil organic carbon compared to RM. The RC system consistently elevated nitrogen (N), phosphorus (P), and potassium (K) throughout both the rice growth and fallow stages, indicating improved nutrient availability and retention. Elevated extracellular enzyme activities linked to carbon, N, and P cycling were observed under RC, with enzymatic stoichiometry revealing increased microbial nutrient limitation intensity and a shift toward P limitation. Microbial community composition was significantly altered under RC, showing increased biomass, a higher fungi-to-bacteria ratio, and greater relative abundance of Gram-positive bacteria, reflecting enhanced soil biodiversity and ecosystem resilience. Further analyses using the Mantel test and Random Forest identified extracellular enzyme activities, PLFAs, soil moisture, and bulk density as major factors shaping microbial communities. Redundancy analysis (RDA) confirmed that total potassium (TK), vector length (VL), soil pH, and total nitrogen (TN) were the strongest environmental predictors of microbial variation, jointly explaining 74.57% of the total variation. Our findings indicated that RC improves soil physicochemical conditions and microbial function, thereby supporting sustainable nutrient cycling and offering a promising, environmentally sound strategy for enhancing productivity and soil health in rice-based agro-ecosystems. Full article
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14 pages, 1849 KiB  
Article
Climate-Driven Microbial Communities Regulate Soil Organic Carbon Stocks Along the Elevational Gradient on Alpine Grassland over the Qinghai–Tibet Plateau
by Xiaomei Mo, Jinhong He, Guo Zheng, Xiangping Tan and Shuyan Cui
Agronomy 2025, 15(8), 1810; https://doi.org/10.3390/agronomy15081810 - 26 Jul 2025
Viewed by 364
Abstract
The Qinghai–Tibet Plateau, a region susceptible to global change, stores substantial amounts of soil organic carbon (SOC) in its alpine grassland. However, little is known about how SOC is regulated by soil microbial communities, which vary with elevation, mean annual temperature (MAT), and [...] Read more.
The Qinghai–Tibet Plateau, a region susceptible to global change, stores substantial amounts of soil organic carbon (SOC) in its alpine grassland. However, little is known about how SOC is regulated by soil microbial communities, which vary with elevation, mean annual temperature (MAT), and mean annual precipitation (MAP). This study integrates phospholipid fatty acid (PLFA) analysis to simultaneously resolve microbial biomass, community composition, and membrane lipid adaptations along an elevational gradient (2861–5090 m) on the Qinghai–Tibet Plateau. This study found that microbial PLFAs increased significantly with rising MAP, while the relationship with MAT was nonlinear. PLFAs of different microbial groups all had a positive effect on SOC storage. At higher altitudes (characterized by lower MAP and lower MAT), Gram-positive bacteria dominated bacterial communities, and fungi dominated the overall microbial community, highlighting microbial structural adaptations as key regulators of carbon storage. Saturated fatty acids with branches of soil microbial membrane dominated across sites, but their prevalence over unsaturated fatty acids decreased at high elevations. These findings establish a mechanistic link between climate-driven microbial community restructuring and SOC vulnerability on the QTP, providing a predictive framework for carbon–climate feedbacks in alpine systems under global warming. Full article
(This article belongs to the Special Issue Soil Carbon Sequestration for Mitigating Climate Change in Grasslands)
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19 pages, 2530 KiB  
Article
Soil Microbiome Drives Depth-Specific Priming Effects in Picea schrenkiana Forests Following Labile Carbon Input
by Kejie Yin, Lu Gong, Xinyu Ma, Xiaochen Li and Xiaonan Sun
Microorganisms 2025, 13(8), 1729; https://doi.org/10.3390/microorganisms13081729 - 24 Jul 2025
Viewed by 319
Abstract
The priming effect (PE), a microbially mediated process, critically regulates the balance between carbon sequestration and mineralization. This study used soils from different soil depths (0–20 cm, 20–40 cm, and 40–60 cm) under Picea schrenkiana forest in the Tianshan Mountains as the research [...] Read more.
The priming effect (PE), a microbially mediated process, critically regulates the balance between carbon sequestration and mineralization. This study used soils from different soil depths (0–20 cm, 20–40 cm, and 40–60 cm) under Picea schrenkiana forest in the Tianshan Mountains as the research object. An indoor incubation experiment was conducted by adding three concentrations (1% SOC, 2% SOC, and 3% SOC) of 13C-labelled glucose. We applied 13C isotope probe-phospholipid fatty acid (PLFA-SIP) technology to investigate the influence of readily labile organic carbon inputs on soil priming effect (PE), microbial community shifts at various depths, and the mechanisms underlying soil PE. The results indicated that the addition of 13C-labeled glucose accelerated the mineralization of soil organic carbon (SOC); CO2 emissions were highest in the 0–20 cm soil layer and decreased trend with increasing soil depth, with significant differences observed across different soil layers (p < 0.05). Soil depth had a positive direct effect on the cumulative priming effect (CPE); however, it showed negative indirect effects through physico-chemical properties and microbial biomass. The CPE of the 0–20 cm soil layer was significantly positively correlated with 13C-Gram-positive bacteria, 13C-Gram-negative bacteria, and 13C-actinomycetes. The CPE of the 20–40 cm and 40–60 cm soil layers exhibited a significant positive correlation with cumulative mineralization (CM) and microbial biomass carbon (MBC). Glucose addition had the largest and most significant positive effect on the CPE. Glucose addition positively affected PLFAs and particularly microbial biomass. This study provides valuable insights into the dynamics of soil carbon pools at varying depths following glucose application, advancing the understanding of forest soil carbon sequestration. Full article
(This article belongs to the Section Environmental Microbiology)
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17 pages, 3355 KiB  
Article
Legume–Non-Legume Cover Crop Mixtures Enhance Soil Nutrient Availability and Physical Properties: A Meta-Analysis Across Chinese Agroecosystems
by Jiayu Ma, Baozhong Yin, Tian Gao, Kaixiao He, Xinqin Huang, Tiantong Jiang and Wenchao Zhen
Agronomy 2025, 15(8), 1756; https://doi.org/10.3390/agronomy15081756 - 22 Jul 2025
Viewed by 410
Abstract
Cover cropping has emerged as a pivotal sustainable agronomic practice aimed at enhancing soil health and sustaining crop productivity. To quantify its effects across diverse agroecosystems, we conducted a meta-analysis of 1877 paired observations from 114 studies (1980–2025) comparing cover cropping with bare [...] Read more.
Cover cropping has emerged as a pivotal sustainable agronomic practice aimed at enhancing soil health and sustaining crop productivity. To quantify its effects across diverse agroecosystems, we conducted a meta-analysis of 1877 paired observations from 114 studies (1980–2025) comparing cover cropping with bare fallow during fallow periods in major cereal systems across China. Cover cropping significantly reduced soil bulk density by 6.1% and increased key soil nutrients including total nitrogen (+13.1%), total phosphorus (+15.6%), hydrolysable nitrogen (+9.3%), available phosphorus (+11.1%), available potassium (+12.4%), soil organic matter (+11.7%), and microbial biomass carbon (+41.1%). Leguminous cover crops outperformed non-legumes in enhancing nitrogen availability, reflecting biological nitrogen fixation. Mixed-species cover crop mixtures showed superior benefits over monocultures, likely due to complementary effects on nutrient cycling and soil structure. Soil texture and initial soil organic carbon significantly moderated these outcomes. Furthermore, although overall soil pH remained stable, cover cropping exhibited a clear buffering effect, tending to regulate soil pH toward neutrality. Meta-regression analyses revealed a diminishing positive effect on total nitrogen (TN), available potassium (AK), and microbial biomass carbon (MBC) with an extended duration of cover cropping, suggesting potential saturation effects. These results underscore the context-dependent efficacy of cover cropping as a strategy for soil quality enhancement. Optimizing cover crop implementation should integrate the consideration of inherent soil characteristics, baseline fertility, and species composition to maximize agroecosystem resilience and sustainability. Full article
(This article belongs to the Section Innovative Cropping Systems)
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13 pages, 1293 KiB  
Article
Organic Amendments Enhance Maize Growth by Improving Chemical and Microbial Properties in Coastal Saline–Alkali Soils
by Xiaoyu Huang, Tao Yin, Weijiao Sun, Guili Ge and Wenliang Wei
Plants 2025, 14(14), 2217; https://doi.org/10.3390/plants14142217 - 17 Jul 2025
Viewed by 428
Abstract
Biochar and seaweed fertilizers could improve soil quality and promote plant growth. However, the key soil factors and microbial mechanisms that drive maize growth in coastal saline–alkali soils remain unclear. A soil culture experiment was designed with four treatments—no organic fertilizer (CK), single [...] Read more.
Biochar and seaweed fertilizers could improve soil quality and promote plant growth. However, the key soil factors and microbial mechanisms that drive maize growth in coastal saline–alkali soils remain unclear. A soil culture experiment was designed with four treatments—no organic fertilizer (CK), single seaweed fertilizer (F), single biochar (B), and combined application of seaweed fertilizer and biochar (BF)—to investigate the effects of biochar and seaweed fertilizer on maize growth and its mechanism. The results showed that B and BF significantly increased maize aboveground biomass by 8.86% and 17.28% compared to CK, respectively. The soil organic carbon, total nitrogen, available nitrogen, available phosphorus, available potassium content, and pH of B and BF were significantly increased. Bacterial diversity increased under B and BF, while fungal richness decreased under BF. The changes in the fungal community were mainly affected by soil available nitrogen, but there was no significant correlation between bacterial communities and these indicators. Pearson correlation analysis suggested that the bacterial Chao1 index was significantly positively correlated with maize growth indicators, soil available phosphorus, and available potassium, as well as the bacterial PD whole tree index with leaf area and available phosphorus. The fungal Shannon index was significantly negatively correlated with maize plant height, leaf area, SPAD, aboveground biomass, and soil total nitrogen and available nutrients. Overall, biochar and seaweed fertilization could significantly promote maize growth by improving soil chemical properties and microbial communities in coastal saline–alkali soils. Full article
(This article belongs to the Section Plant–Soil Interactions)
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31 pages, 4680 KiB  
Article
Path Mechanism and Field Practice Effect of Green Agricultural Production on the Soil Organic Carbon Dynamics and Greenhouse Gas Emission Intensity in Farmland Ecosystems
by Xiaoqian Li, Yi Wang, Wen Chen and Bin He
Agriculture 2025, 15(14), 1499; https://doi.org/10.3390/agriculture15141499 - 12 Jul 2025
Viewed by 370
Abstract
Exploring the mechanisms by which green agricultural production reduces emissions and enhances carbon sequestration in soil can provide a scientific basis for greenhouse gas reduction and sustainable development in farmland. This study uses a combination of meta-analysis and field experiments to evaluate the [...] Read more.
Exploring the mechanisms by which green agricultural production reduces emissions and enhances carbon sequestration in soil can provide a scientific basis for greenhouse gas reduction and sustainable development in farmland. This study uses a combination of meta-analysis and field experiments to evaluate the impact of different agricultural management practices and climatic conditions on soil organic carbon (SOC) and the emissions of CO2 and CH4, as well as the role of microorganisms. The results indicate the following: (1) Meta-analysis reveals that the long-term application of organic fertilizers in green agriculture increases SOC at a rate four times higher than that of chemical fertilizers. No-till and straw return practices significantly reduce CO2 emissions from alkaline soils by 30.7% (p < 0.05). Warm and humid climates in low-altitude regions are more conducive to soil carbon sequestration. (2) Structural equation modeling of plant–microbe–soil carbon interactions shows that plant species diversity (PSD) indirectly affects microbial biomass by influencing organic matter indicators, mineral properties, and physicochemical characteristics, thereby regulating soil carbon sequestration and greenhouse gas emissions. (3) Field experiments conducted in the typical green farming research area of Chenzhuang reveal that soils managed under natural farming absorb CH4 at a rate three times higher than those under conventional farming, and the stoichiometric ratios of soil enzymes in the former are close to 1. The peak SOC (19.90 g/kg) in the surface soil of Chenzhuang is found near fields cultivated with natural farming measures. This study provides theoretical support and practical guidance for the sustainable development of green agriculture. Full article
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12 pages, 2220 KiB  
Article
The Effects of Tree Species on Soil Organic Carbon Mineralization in Reservoir Water-Level Drawdown Zones
by Jiayi Zhang, Fang Wang, Jia Yang, Yanting Zhang, Li Qiu, Ziting Chen, Xi Wang, Tianya Zhang, Songzhe Li, Jiacheng Tong, Shunbao Lu and Yanjie Zhang
Forests 2025, 16(7), 1145; https://doi.org/10.3390/f16071145 - 11 Jul 2025
Viewed by 302
Abstract
Soil organic carbon (SOC) mineralization is the conversion of SOC to inorganic forms of carbon (C) by microbial decomposition and conversion. It plays an important role in global C cycling. Currently, most of the studies investigating the effects of different tree species on [...] Read more.
Soil organic carbon (SOC) mineralization is the conversion of SOC to inorganic forms of carbon (C) by microbial decomposition and conversion. It plays an important role in global C cycling. Currently, most of the studies investigating the effects of different tree species on SOC mineralization focus on forest ecosystems, and few have focused on reservoir water-level drawdown zones. In this study, we used an indoor incubation method to investigate SOC mineralization in the plantation soils of Glyptostrobus pensilis, Taxodium Zhongshanshan, Taxodium distichum and CK (unplanted plantation) in the reservoir water-level drawdown zones. We aimed to explore the effects of different tree species on the process of SOC mineralization in the reservoir water-level drawdown zones by considering both the biological and chemical processes of the soil. The results showed that the rates of SOC mineralization in the G. pensilis and T. Zhongshanshan plantations were 47% and 37%, respectively, higher than those in CK (p < 0.05), whereas the rate of SOC mineralization in T. distichum soils did not differ from that in CK. The structural equation model’s results showed microbial biomass carbon (MBC) is a key driver of SOC mineralization, while SOC and dissolved organic carbon (DOC) concentrations are also important factors that affect SOC mineralization and follow MBC. Compared to soil biochemical properties, the bacterial community composition has relatively little effect on SOC mineralization. Planted forests can, to a degree, change the biochemical properties of the soil in the reservoir water-level drawdown zones, effectively improving soil pH, and significantly increasing the amount of potential soil C mineralization, the content of SOC and the diversity of the soil bacteria (p < 0.05). Full article
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18 pages, 1291 KiB  
Article
Effect of Calcium Addition on Extracellular Enzymes and Soil Organic Carbon in Maize Rhizosphere Soils
by Zhaoquan He, Xue Shang and Xiaoze Jin
Agronomy 2025, 15(7), 1680; https://doi.org/10.3390/agronomy15071680 - 11 Jul 2025
Viewed by 360
Abstract
This study examined the regulatory mechanism of calcium (Ca) amendment on the dynamics of soil organic carbon (SOC) fractions and extracellular enzyme activities, elucidating the role of Ca in soil carbon cycling processes. A field experiment with maize was conducted, comparing treatments of [...] Read more.
This study examined the regulatory mechanism of calcium (Ca) amendment on the dynamics of soil organic carbon (SOC) fractions and extracellular enzyme activities, elucidating the role of Ca in soil carbon cycling processes. A field experiment with maize was conducted, comparing treatments of low calcium (T1), high calcium (T2), and a calcium-free control (CK). Measurements included inter-root SOC fractions—soluble organic carbon (DOC), microbial biomass carbon (MBC), and readily oxidizable organic carbon (ROC)—and the activities of the following extracellular enzymes: β-xylanase, β-glucosidase (β-glu), phenol oxidase (Phox), peroxidase (Pero), phosphatase (Phos), acetylaminoglucosidase (NAG), and urease. The main findings indicated the following: (1) Calcium addition significantly increased SOC content (115.04% and 99.22% higher in T1 and T2, respectively, than CK during the entire reproductive period) and enhanced microbial activity (elevated DOC and MBC). However, SOC decreased by 8.44% (T1) and 16.38% (T2) relative to CK in the late reproductive stage (irrigation–ripening), potentially reflecting microbial utilization (supported by the inverse correlation between SOC and MBC/DOC), and maize carbon reallocation during grain filling. (2) Calcium activated β-glu, Phox, Phos, NAG, and urease (p < 0.05), with pronounced increases in Phox (241.13 IU·L−1) and Phos (1126.65 U·L−1), indicating enhanced organic matter mineralization and phosphorus availability. (3) Calcium-driven MBC and ROC accumulation was associated with the positive regulation of Phox (path coefficient > 0.8) and the negative regulation of Phos. SOC was co-regulated by β-glu and Phos (R2 = 0.753). (4) Calcium dynamically optimized the short-term carbon distribution through enzyme activity while promoting long-term sequestration. Our study provides new evidence supporting multi-pathway interactions through which calcium mediates enzyme networks to influence the soil carbon cycle. The findings provide a theoretical foundation for calcium fertilizer management and soil carbon sequestration strategies in agriculture, advancing academic and practical goals for sustainable development and carbon neutrality. Full article
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28 pages, 6252 KiB  
Article
An Evaluation of Inoculant Additives on Cell Viability and Their Effects on the Growth and Physiology of Glycine max L.
by Francisco Rafael Santos da Conceição, Layara Alexandre Bessa, Marconi Batista Teixeira, Bárbara Gonçalves Cruvinel and Luciana Cristina Vitorino
Agronomy 2025, 15(7), 1668; https://doi.org/10.3390/agronomy15071668 - 10 Jul 2025
Viewed by 291
Abstract
The development of efficient bioinoculant formulations requires compounds with stabilizing, thickening, and carrier functions to preserve microbial viability and promote biological activity in soil. However, the majority of studies evaluate inoculant formulations predominantly in terms of bacterial viability, overlooking other important performance parameters. [...] Read more.
The development of efficient bioinoculant formulations requires compounds with stabilizing, thickening, and carrier functions to preserve microbial viability and promote biological activity in soil. However, the majority of studies evaluate inoculant formulations predominantly in terms of bacterial viability, overlooking other important performance parameters. This study employed an integrative approach combining in vitro and plant-based assays to assess the effects of starch, carboxymethyl cellulose (CMC), and trehalose in formulations containing Azospirillum brasilense, Bradyrhizobium diazoefficiens, Methylobacterium symbioticum, and Paenibacillus alvei, applied to Glycine max seeds. Our hypothesis was that the presence of these additives, each with distinct functional roles (starch as a slow-release carbon source, CMC as a structural agent and protector against physical stress, and trehalose as an osmoprotectant and membrane stabilizer), would influence not only bacterial viability but also the seed germination, growth, and physiological responses of inoculated G. max plants. Starch improved viability in A. brasilense formulations, while both starch and trehalose had positive effects on M. symbioticum. These additives also enhanced plant traits, including dry biomass, chlorophyll content, carboxylation efficiency (A/Ci), and photochemical efficiency (Fv/Fm and Pi_Abs). Trehalose was particularly effective in formulations with B. diazoefficiens and M. symbioticum, supporting its use as a versatile stabilizer. In contrast, CMC (0.25%) negatively impacted bacterial viability, especially for B. diazoefficiens and P. alvei, and impaired physiological parameters in G. max when combined with M. symbioticum. These results highlight the need to evaluate formulation components not only for their physical roles but also for their specific interactions with microbial strains and effects on host plants. Such an integrative approach is essential for designing stable, efficient bioinoculants that align with sustainable agricultural practices. Full article
(This article belongs to the Section Agricultural Biosystem and Biological Engineering)
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18 pages, 673 KiB  
Article
Effects of Tillage Methods on Carbon and Nitrogen Sequestration and Soil Microbial Stoichiometric Equilibrium in a Black Soil Farmland with Full Return of Straw to the Field
by Meiren Rong, Zhigang Wang, Xiangqian Zhang, Zhanyuan Lu, Lanfang Bai, Zhipeng Cheng, Tianhao Wang, Yajing Zhang, Hongwei Liang, Tiantian Meng, Lingyue Liu and Fang Luo
Agronomy 2025, 15(7), 1664; https://doi.org/10.3390/agronomy15071664 - 9 Jul 2025
Viewed by 255
Abstract
Long-term irrational farming practices and low return of organic materials to the fields in the black soil area have led to reduced soil carbon and nitrogen stability and nutrient imbalance, which in turn affect soil fertility and crop yields. Straw return is an [...] Read more.
Long-term irrational farming practices and low return of organic materials to the fields in the black soil area have led to reduced soil carbon and nitrogen stability and nutrient imbalance, which in turn affect soil fertility and crop yields. Straw return is an effective way to enhance soil organic matter and crop productivity, but the effects of long-term straw return under tilling practices on carbon and nitrogen sequestration and soil microbial stoichiometric equilibrium in black soil need to be further investigated. This study investigated the physical, chemical and biological properties of the 0–60 cm soil layer under deep tillage with straw return to the field (DTS), deep harrow with straw return to the field (DHS), rotary tillage with straw return to the field (RTS), no tillage with straw return to the field (NTS), and conventional tillage with straw removal (CT) on the basis of seven consecutive years of tillage pattern location trials in the black soil area of eastern Inner Mongolia. The results showed that DTS and NTS significantly increased the soil organic carbon (SOC), soil total nitrogen (TN), soil microbial biomass carbon (MBC), soil microbial biomass nitrogen (MBN) contents, and the SOC/TN ratio in the 0–40 cm soil layer, enhancing soil carbon and nitrogen sequestration capacity, while the concomitant increase in the average MBC/MBN ratio in the plow layer from 6.8 to 8.2. The soil microbial quotient increased by 29.0% and 26.2%, respectively, and the stoichiometric imbalance ratio decreased by 7.9% and 5.7%, respectively. Meanwhile, in terms of maize yield from 2018 to 2024, DTS showed the most stable and significant yield increase with 41.53%. Whereas NTS showed a higher yield increase potential with a 27.36% increase in yield as the number of years of straw return increased. Therefore, DTS and NTS are superior tillage methods to improve the quality of the black soil tillage layer, to promote soil microbial carbon and nitrogen balance, and to increase crop yields. Full article
(This article belongs to the Section Agroecology Innovation: Achieving System Resilience)
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