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Keywords = paddy water

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15 pages, 2172 KiB  
Article
Quantifying Macropore Variability in Terraced Paddy Fields Using X-Ray Computed Tomography
by Rong Ma, Linlin Chu, Lidong Bi, Dan Chen and Zhaohui Luo
Agronomy 2025, 15(8), 1873; https://doi.org/10.3390/agronomy15081873 - 1 Aug 2025
Viewed by 193
Abstract
Large soil pores critically influence water and solute transport in soils. The presence of preferential flow paths created by soil macropores can profoundly impact water quality, underscoring the necessity of accurately assessing the characteristics of these macropores. However, it remains unclear whether variations [...] Read more.
Large soil pores critically influence water and solute transport in soils. The presence of preferential flow paths created by soil macropores can profoundly impact water quality, underscoring the necessity of accurately assessing the characteristics of these macropores. However, it remains unclear whether variations in macropore structure exist between different altitudes and positions of terraced paddy fields. The primary objective of this research was to utilize X-ray computed tomography (CT) and image analysis techniques to characterize the soil pore structure at both the inner field and ridge positions across different altitude levels (high, medium, and low altitude) within terraced paddy fields. The results indicate that there are significant differences in the distribution of large soil pores at different altitudes, with large pores concentrated in the surface layer (0–10 cm) in low-altitude areas, while in high-altitude areas, the distribution of large pores is more uniform. Additionally, as altitude increases, the porosity of large pores shows an increasing trend. The three-dimensional equivalent diameter and large pore volume are primarily characterized by large pores ranging from 1 to 2 mm and 0 to 5 mm3, respectively, with their morphology predominantly appearing spherical or ellipsoidal. The connectivity of large pores in the surface layer of paddy soil is stronger than that in the bunds. However, this connectivity gradually weakens with increasing soil depth. The findings from this study provide valuable quantitative insights into the unique characteristics of soil macropores that vary according to the altitude and position in terraced paddy fields. Moreover, this study emphasizes the necessity for future research that encompasses a broader range of soil types, altitudes, and terraced paddy locations to validate and further explore the identified relationships between altitude and macropore characteristics. Full article
(This article belongs to the Section Precision and Digital Agriculture)
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15 pages, 2232 KiB  
Article
A Multi-Objective Approach for Improving Ecosystem Services and Mitigating Environmental Externalities in Paddy Fields and Its Emergy Analysis
by Naven Ramdat, Hongshuo Zou, Shiwen Sheng, Min Fu, Yingying Huang, Yaonan Cui, Yiru Wang, Rui Ding, Ping Xu and Xuechu Chen
Water 2025, 17(15), 2244; https://doi.org/10.3390/w17152244 - 29 Jul 2025
Viewed by 298
Abstract
Traditional intensive agricultural system impedes ecological functions, such as nutrient cycling and biodiversity conservation, resulting in excessive nitrogen discharge, CH4 emission, and ecosystem service losses. To enhance critical ecosystem services and mitigate environmental externalities in paddy fields, we developed a multi-objective agricultural [...] Read more.
Traditional intensive agricultural system impedes ecological functions, such as nutrient cycling and biodiversity conservation, resulting in excessive nitrogen discharge, CH4 emission, and ecosystem service losses. To enhance critical ecosystem services and mitigate environmental externalities in paddy fields, we developed a multi-objective agricultural system (MIA system), which combines two eco-functional units: paddy wetlands and Beitang (irrigation water collection pond). Pilot study results demonstrated that the MIA system enhanced biodiversity and inhibited pest outbreak, with only a marginal reduction in rice production compared with the control. Additionally, the paddy wetland effectively removed nitrogen, with removal rates of total nitrogen and dissolved inorganic nitrogen ranging from 0.06 to 0.65 g N m−2 d−1 and from 0.02 to 0.22 g N m−2 d−1, respectively. Continuous water flow in the paddy wetland reduced the CH4 emission by 84.4% compared with the static water conditions. Furthermore, a simulation experiment indicated that tide flow was more effective in mitigating CH4 emission, with a 68.3% reduction compared with the drying–wetting cycle treatment. The emergy evaluation demonstrated that the MIA system outperformed the ordinary paddy field when considering both critical ecosystem services and environmental externalities. The MIA system exhibited higher emergy self-sufficiency ratio, emergy yield ratio, and emergy sustainable index, along with a lower environmental load ratio. Additionally, the system required minimal transformation, thus a modest investment. By presenting the case of the MIA system, we provide a theoretical foundation for comprehensive management and assessment of agricultural ecosystems, highlighting its significant potential for widespread application. Full article
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20 pages, 2984 KiB  
Article
Influence of Rice–Crayfish Co-Culture Systems on Soil Properties and Microbial Communities in Paddy Fields
by Dingyu Duan, Dingxuan He, Liangjie Zhao, Chenxi Tan, Donghui Yang, Wende Yan, Guangjun Wang and Xiaoyong Chen
Plants 2025, 14(15), 2320; https://doi.org/10.3390/plants14152320 - 27 Jul 2025
Viewed by 383
Abstract
Integrated rice–crayfish (Oryza sativaProcambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects [...] Read more.
Integrated rice–crayfish (Oryza sativaProcambarus clarkii) co-culture (RC) systems have gained prominence due to their economic benefits and ecological sustainability; however, the interactions between soil properties and microbial communities in such systems remain poorly understood. This study evaluated the effects of the RC systems on soil physicochemical characteristics and microbial dynamics in paddy fields of southern Henan Province, China, over the 2023 growing season and subsequent fallow period. Using a randomized complete design, rice monoculture (RM, as the control) and RC treatments were compared across replicated plots. Soil and water samples were collected post-harvest and pre-transplanting to assess soil properties, extracellular enzyme activity, and microbial community structure. Results showed that RC significantly enhanced soil moisture by up to 30.2%, increased soil porosity by 9.6%, and nearly tripled soil organic carbon compared to RM. The RC system consistently elevated nitrogen (N), phosphorus (P), and potassium (K) throughout both the rice growth and fallow stages, indicating improved nutrient availability and retention. Elevated extracellular enzyme activities linked to carbon, N, and P cycling were observed under RC, with enzymatic stoichiometry revealing increased microbial nutrient limitation intensity and a shift toward P limitation. Microbial community composition was significantly altered under RC, showing increased biomass, a higher fungi-to-bacteria ratio, and greater relative abundance of Gram-positive bacteria, reflecting enhanced soil biodiversity and ecosystem resilience. Further analyses using the Mantel test and Random Forest identified extracellular enzyme activities, PLFAs, soil moisture, and bulk density as major factors shaping microbial communities. Redundancy analysis (RDA) confirmed that total potassium (TK), vector length (VL), soil pH, and total nitrogen (TN) were the strongest environmental predictors of microbial variation, jointly explaining 74.57% of the total variation. Our findings indicated that RC improves soil physicochemical conditions and microbial function, thereby supporting sustainable nutrient cycling and offering a promising, environmentally sound strategy for enhancing productivity and soil health in rice-based agro-ecosystems. Full article
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24 pages, 3946 KiB  
Article
Frog Density and Growth Stage of Rice Impact Paddy Field and Gut Microbial Communities in Rice–Frog Co-Cropping Models
by Zhangyan Zhu, Ran Li, Yunshuang Ma, Anran Yu and Rongquan Zheng
Microorganisms 2025, 13(7), 1700; https://doi.org/10.3390/microorganisms13071700 - 20 Jul 2025
Viewed by 552
Abstract
The black-spotted frog (Pelophylax nigromaculatus) is a common economic species in the rice–frog ecological cropping mode. The present study investigated microbial community structures in paddy water and black-spotted frog’s guts across rice monoculture and low-/high-density rice–frog co-cropping systems at four rice [...] Read more.
The black-spotted frog (Pelophylax nigromaculatus) is a common economic species in the rice–frog ecological cropping mode. The present study investigated microbial community structures in paddy water and black-spotted frog’s guts across rice monoculture and low-/high-density rice–frog co-cropping systems at four rice growth stages. Proteobacteria dominate in paddy water, while frog guts are enriched in Firmicutes and Actinobacteriota. The frog density shows no impact on the α-diversity, but rice growth stages significantly alter the Shannon, Simpson, and Pielou_e indices (p < 0.01). Co-cropping may promote amino acid synthesis, elemental cycling, and stress tolerance in paddy water microbiota, which are more diverse than gut microbiota. Strong correlations exist between paddy water and gut microbiotas, with Limnohabitans being linked to gut diversity (p < 0.05). Low-density co-cropping enhances Xenorhabdus, which is beneficial for pest control and stabilizes gut microbiota. The results of this study offer insights for managing rice–frog systems based on rice growth stages. Full article
(This article belongs to the Section Gut Microbiota)
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18 pages, 1414 KiB  
Article
Field Validation of the DNDC-Rice Model for Crop Yield, Nitrous Oxide Emissions and Carbon Sequestration in a Soybean System with Rye Cover Crop Management
by Qiliang Huang, Nobuko Katayanagi, Masakazu Komatsuzaki and Tamon Fumoto
Agriculture 2025, 15(14), 1525; https://doi.org/10.3390/agriculture15141525 - 15 Jul 2025
Viewed by 394
Abstract
The DNDC-Rice model effectively simulates yield and greenhouse gas emissions within a paddy system, while its performance under upland conditions remains unclear. Using data from a long-term cover crop experiment (fallow [FA] vs. rye [RY]) in a soybean field, this study validated the [...] Read more.
The DNDC-Rice model effectively simulates yield and greenhouse gas emissions within a paddy system, while its performance under upland conditions remains unclear. Using data from a long-term cover crop experiment (fallow [FA] vs. rye [RY]) in a soybean field, this study validated the DNDC-Rice model’s performance in simulating soil dynamics, crop growth, and C-N cycling processes in upland systems through various indicators, including soil temperature, water-filled pore space (WFPS), soybean biomass and yield, CO2 and N2O fluxes, and soil organic carbon (SOC). Based on simulated results, the underestimation of cumulative N2O flux (25.6% in FA and 5.1% in RY) was attributed to both underestimated WFPS and the algorithm’s limitations in simulating N2O emission pulses. Overestimated soybean growth increased respiration, leading to the overestimation of CO2 flux. Although the model captured trends in SOC stock, the simulated annual values differed from observations (−9.9% to +10.1%), potentially due to sampling errors. These findings indicate that the DNDC-Rice model requires improvements in its N cycling algorithm and crop growth sub-models to improve predictions for upland systems. This study provides validation evidence for applying DNDC-Rice to upland systems and offers direction for improving model simulation in paddy-upland rotation systems, thereby enhancing its applicability in such contexts. Full article
(This article belongs to the Special Issue Detection and Management of Agricultural Non-Point Source Pollution)
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18 pages, 2260 KiB  
Article
Study of Detection of Typical Pesticides in Paddy Water Based on Dielectric Properties
by Shuanggen Huang, Mei Yang, Junshi Huang, Longwei Shang, Qi Chen, Fang Peng, Muhua Liu, Yan Wu and Jinhui Zhao
Agronomy 2025, 15(7), 1666; https://doi.org/10.3390/agronomy15071666 - 9 Jul 2025
Viewed by 258
Abstract
Due to the dramatic increase in pesticide usage and improper application, large amounts of unused pesticides enter the environment through paddy water, causing severe pesticide pollution. To find a rapid method for identifying pesticide types and predicting their concentrations, the dielectric properties frequency [...] Read more.
Due to the dramatic increase in pesticide usage and improper application, large amounts of unused pesticides enter the environment through paddy water, causing severe pesticide pollution. To find a rapid method for identifying pesticide types and predicting their concentrations, the dielectric properties frequency response of pesticides was analyzed in paddy water. A rapid detection method for typical pesticides such as chlorpyrifos, isoprothiolane, imidacloprid and carbendazim was studied based on their dielectric properties. In this paper, amplitude and phase frequency response data for blank paddy water samples and 15 types of paddy water samples containing pesticides were collected at 10 different temperatures. Principal component analysis (PCA) and competitive adaptive reweighted sampling (CARS) were used to extract characteristic frequencies. A species identification model based on support vector machine (SVM) for rapid detection of pesticides in paddy water was established using amplitude and phase frequency response data separately. Frequency response data of 431 sets from nine types of paddy water samples were divided into training and prediction sets in a 3:1 ratio, and a content prediction model based on artificial neural networks (ANN) with multiple inputs and single output was established using amplitude and phase frequency response data after CARS feature extraction. The experimental results show that both PCA-SVM and CARS-SVM species identification models established using amplitude and phase frequency response data have excellent identification effects, reaching over 90%. The PCA-SVM model based on phase frequency response data has the best identification effect for typical pesticides in paddy water with a prediction recognition accuracy range of 97.5–100%. The ANN content prediction model established using phase frequency response data performs well, and the highest R2 prediction values of chlorpyrifos, isoprothiolane, imidacloprid and carbendazim in paddy water were 0.8249, 0.8639, 0.9113 and 0.8368 respectively. The research established a dielectric property detection method for the identification and content prediction of typical pesticides in paddy water, providing a theoretical basis for the hardware design of capacitive sensors based on dielectric property and the detection of pesticide residues in paddy water. This provides a new method and approach for pesticide residue detection, which is of great significance for scientific pesticide application and sustainable agricultural development. Full article
(This article belongs to the Section Pest and Disease Management)
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15 pages, 2700 KiB  
Article
Rainfall-Driven Nitrogen Dynamics in Catchment Ponds: Comparing Forest, Paddy Field, and Orchard Systems
by Mengdie Jiang, Yue Luo, Hengbin Xiao, Peng Xu, Ronggui Hu and Ronglin Su
Agriculture 2025, 15(14), 1459; https://doi.org/10.3390/agriculture15141459 - 8 Jul 2025
Viewed by 300
Abstract
The event scale method, employed for assessing changes in nitrogen (N) dynamics pre- and post-rain, provides insights into its transport to surface water systems. However, the relationships between N discharge in catchments dominated by different land uses and water quality remain unclear. This [...] Read more.
The event scale method, employed for assessing changes in nitrogen (N) dynamics pre- and post-rain, provides insights into its transport to surface water systems. However, the relationships between N discharge in catchments dominated by different land uses and water quality remain unclear. This study quantified variations in key N components in ponds across forest, paddy field, and orchard catchments before and after six rainfall events. The results showed that nitrate (NO3-N) was the main N component in the ponds. Post-rainfall, N concentrations increased, with ammonium (NH4+-N) and particulate nitrogen (PN) exhibiting significant elevations in agricultural ponds. Orchard catchments contributed the highest N load to the ponds, while forest catchments contributed the lowest. Following a heavy rainstorm event, total nitrogen (TN) loads in the ponds within forest, paddy field, and orchard catchments reached 6.68, 20.93, and 34.62 kg/ha, respectively. These loads were approximately three times higher than those observed after heavy rain events. The partial least squares structural equation model (PLS-SEM) identified that rainfall amount and changes in water volume were the dominant factors influencing N dynamics. Furthermore, the greater slopes of forest and orchard catchments promoted more N loss to the ponds post-rain. In paddy field catchments, larger catchment areas were associated with decreased N flux into the ponds, while larger pond surface areas minimized the variability in N concentration after rainfall events. In orchard catchment ponds, pond area was positively correlated with N concentrations and loads. This study elucidates the effects of rainfall characteristics and catchment heterogeneity on N dynamics in surface waters, offering valuable insights for developing pollution management strategies to mitigate rainfall-induced alterations. Full article
(This article belongs to the Special Issue Soil-Improving Cropping Systems for Sustainable Crop Production)
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14 pages, 1968 KiB  
Article
Ensemble Learning-Based Weed Detection from a Duck’s Perspective Using an Aquatic Drone in Rice Paddies
by Soma Asuka, Tetsuya Nakamura, Ikuko Shimizu, Taiichiro Ookawa and Hironori Nakajo
Appl. Sci. 2025, 15(13), 7440; https://doi.org/10.3390/app15137440 - 2 Jul 2025
Viewed by 292
Abstract
Semantic segmentation using neural networks (NNs) has significant potential for weed detection in agricultural fields. However, conventional datasets captured from aerial perspectives often fail to detect weeds that are either hidden beneath crops or submerged in water. This study proposes a method for [...] Read more.
Semantic segmentation using neural networks (NNs) has significant potential for weed detection in agricultural fields. However, conventional datasets captured from aerial perspectives often fail to detect weeds that are either hidden beneath crops or submerged in water. This study proposes a method for accurately detecting weed pixels through ensemble learning-based semantic segmentation, using forward-facing images captured by a camera mounted on an aquatic drone navigating between rice plants. We also present a paddy field weed image dataset constructed to train the NN models. Multiple semantic segmentation models were trained, compared, and evaluated, achieving a weed intersection over union (IoU) of 0.441, mean IoU (mIoU) of 0.706, and pixel accuracy of 0.971. Full article
(This article belongs to the Special Issue Big Data and AI for Food and Agriculture)
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17 pages, 784 KiB  
Article
A Survey-Based Emission Inventory of Greenhouse Gases Released from Rice Production on Consolidated Land in the Red River Delta of Vietnam
by Dinh Thi Hai Van, Nguyen Thi Kim Oanh and Nguyen Thi Bich Yen
Atmosphere 2025, 16(7), 794; https://doi.org/10.3390/atmos16070794 - 30 Jun 2025
Viewed by 463
Abstract
In this study, relevant rice cultivation data were collected through a local survey, and the life cycle assessment (LCA) method was employed to quantify greenhouse gas (GHG) emissions from rice production on consolidated land in the Red River Delta (RRD). Systematic sampling was [...] Read more.
In this study, relevant rice cultivation data were collected through a local survey, and the life cycle assessment (LCA) method was employed to quantify greenhouse gas (GHG) emissions from rice production on consolidated land in the Red River Delta (RRD). Systematic sampling was used in face-to-face interviews with 45 rice farming households in a representative commune of Hai Duong province. Specific GHG emissions were significantly higher in the summer crop (averaged at 11.4 t CO2-eq/ha or 2.2 t CO2-eq/t grain) than in the spring crop (6.8 t CO2-eq/ha or 1.2 t CO2-eq/t grain). Methane was a dominant GHG emitted from paddy fields, contributing 84% of the total emissions of CO2-eq in the summer crop and 73% in the spring crop. Fertilizer use and N2O emissions accounted for 9% of emissions in the summer crop and 16% in the spring crop. Energy consumption for machinery and irrigation added a further 4% and 8%, respectively. Annually, as of 2023, the rice production activities in the RRD release 7.3 Tg of CO2-eq (100 years), a significant contribution to the national GHG emissions. GHG emissions under alternative scenarios of rice straw management were assessed. This study highlights the role of land consolidation in improving water management, which contributes to lowering emissions. Based on the findings, several mitigation measures could be identified, including improved irrigation practices, optimized fertilizer use, and the promotion of sustainable rice straw management practices. Full article
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18 pages, 1601 KiB  
Article
Dual Role of Iron Oxides in Stabilizing Particulate and Mineral-Associated Organic Carbon Under Field Management in Paddies
by Hang Guo, Linxian Liao, Junzeng Xu, Wenyi Wang, Peng Chen, Zhihui Min, Yajun Luan, Yu Han and Keke Bao
Agriculture 2025, 15(13), 1385; https://doi.org/10.3390/agriculture15131385 - 27 Jun 2025
Viewed by 331
Abstract
The interactions between iron oxides and organic carbon within the particulate organic matter (POM) and mineral-associated organic matter (MAOM) fractions in paddy soils remain insufficiently understood, yet they are likely crucial for unlocking the carbon sequestration potential of these systems. In this study, [...] Read more.
The interactions between iron oxides and organic carbon within the particulate organic matter (POM) and mineral-associated organic matter (MAOM) fractions in paddy soils remain insufficiently understood, yet they are likely crucial for unlocking the carbon sequestration potential of these systems. In this study, we investigated the distribution of soil iron oxides and organic carbon within POM and MAOM fractions following 10 years of continuous irrigation and organic amendment management. We also examined the relationship between iron oxide transformation and these two SOC (soil organic carbon) fractions. Our results demonstrated that, under both flooded irrigation and controlled irrigation regimes, straw return or manure application effectively enhanced soil carbon sequestration, as evidenced by increases in both POM-C (POM-associated organic carbon) and MAOM-C (MAOM-associated organic carbon) contents. Meanwhile, exogenous carbon inputs promoted the transformation of crystalline iron oxides into short-range ordered iron oxides and iron oxide colloids, thereby enhancing the activation and complexation degree of soil iron oxides and facilitating the formation of Fe-bound organic carbon. Further regression analysis revealed that the activation degree of iron oxides had a stronger influence on POM-C, whereas the complexation degree had a greater effect on MAOM-C. This implies that exogenous carbon inputs are effective in promoting soil carbon sequestration in both flooded and water-saving irrigated rice paddies and that iron oxide transformation plays a key role in mediating this effect. Full article
(This article belongs to the Section Agricultural Soils)
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22 pages, 2370 KiB  
Article
Effects of Land Use Conversion from Upland Field to Paddy Field on Soil Temperature Dynamics and Heat Transfer Processes
by Jun Yi, Mengyi Xu, Qian Ren, Hailin Zhang, Muxing Liu, Yuanhang Fei, Shenglong Li, Hanjiang Nie, Qi Li, Xin Ni and Yongsheng Wang
Land 2025, 14(7), 1352; https://doi.org/10.3390/land14071352 - 26 Jun 2025
Viewed by 352
Abstract
Investigating soil temperature and the heat transfer process is essential for understanding water–heat changes and energy balance in farmland. The conversion from upland fields (UFs) to paddy fields (PFs) alters the land cover, irrigation regimes, and soil properties, leading to differences in soil [...] Read more.
Investigating soil temperature and the heat transfer process is essential for understanding water–heat changes and energy balance in farmland. The conversion from upland fields (UFs) to paddy fields (PFs) alters the land cover, irrigation regimes, and soil properties, leading to differences in soil temperature, thermal properties, and heat fluxes. Our study aimed to quantify the effects of converting UFs to PFs on soil temperature and heat transfer processes, and to elucidate its underlying mechanisms. A long-term cultivated UF and a newly developed PF (converted from a UF in May 2015) were selected for this study. Soil water content (SWC) and temperature were monitored hourly over two years (June 2017 to June 2019) in five soil horizons (i.e., 10, 20, 40, 60, and 90 cm) at both fields. The mean soil temperature differences between the UF and PF at each depth on the annual scale varied from −0.1 to 0.4 °C, while they fluctuated more significantly on the seasonal (−0.9~1.8 °C), monthly (−1.5~2.5 °C), daily (−5.6~4.9 °C), and hourly (−7.3~11.3 °C) scales. The SWC in the PF was significantly higher than that in the UF, primarily due to differences in tillage practices, which resulted in a narrower range of soil temperature variation in the PF. Additionally, the SWC and soil physicochemical properties significantly altered the soil’s thermal properties. Compared with the UF, the volumetric heat capacity (Cs) at the depths of 10, 20, 40, 60, and 90 cm in the PF changed by 8.6%, 19.0%, 5.5%, −4.3%, and −2.9%, respectively. Meanwhile, the thermal conductivity (λθ) increased by 1.5%, 18.3%, 19.0%, 9.0%, and 25.6%, respectively. Moreover, after conversion from the UF to the PF, the heat transfer direction changed from downward to upward in the 10–20 cm soil layer, resulting in a 42.9% reduction in the annual average soil heat flux (G). Furthermore, the differences in G between the UF and PF were most significant in the summer (101.9%) and most minor in the winter (12.2%), respectively. The conversion of the UF to the PF increased the Cs and λθ, ultimately reducing the range of soil temperature variation and changing the direction of heat transfer, which led to more heat release from the soil. This study reveals the effects of farmland use type conversion on regional land surface energy balance, providing theoretical underpinnings for optimizing agricultural ecosystem management. Full article
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19 pages, 1954 KiB  
Article
Biochar Makes Soil Organic Carbon More Labile, but Its Carbon Sequestration Potential Remains Large in an Alternate Wetting and Drying Paddy Ecosystem
by Wanning Dai, Zhengrong Bao, Jun Meng, Taotao Chen and Xiao Liang
Agronomy 2025, 15(7), 1547; https://doi.org/10.3390/agronomy15071547 - 25 Jun 2025
Cited by 1 | Viewed by 419
Abstract
Given the worsening global climate change that drives drought frequency and irrigation water shortages, implementing water-conserving practices like alternate wetting and drying (AWD) is now critically urgent. Biochar is widely used for soil carbon sequestration. However, there is limited information on the effects [...] Read more.
Given the worsening global climate change that drives drought frequency and irrigation water shortages, implementing water-conserving practices like alternate wetting and drying (AWD) is now critically urgent. Biochar is widely used for soil carbon sequestration. However, there is limited information on the effects of biochar on soil organic carbon (SOC) and its labile fractions in paddy fields, especially under AWD. A two-year field experiment was conducted with two irrigation regimes (CF: continuous flooding irrigation; AWD) as the main plots and 0 (B0) and 20 t ha−1 (B1) biochar as sub-plots. AWD had no effect on the SOC and particulate organic carbon (POC) content, but increased the dissolved organic carbon (DOC), microbial biomass carbon (MBC), easily oxidizable organic carbon (EOC), light fraction organic carbon (LFOC), and carbon pool management index (CPMI) at 0–10 cm depths, by 24.4–56.4%, 12.6–17.7%, 9.2–16.8%, 25.6–28.1%, and 11.3–18.6%, respectively. Biochar increased SOC while also increasing DOC, MBC, EOC, LFOC, POC, and CPMI at 0–20 cm depths, by 18.4–53.3%, 14.7–70.2%, 17.4–22.3%, 10.2–27.6%, 95.2–188.3%, 46.6–224%, and 5.6–27.2, respectively, making SOC more labile under AWD. Our results highlight that biochar still holds great potential for improving soil quality and carbon sequestration under AWD, and the combination of biochar and AWD can achieve the synergistic optimization of the food–water–carbon sequestration trade-off, which is beneficial to sustainable agricultural production. Full article
(This article belongs to the Special Issue Biochar’s Role in the Sustainability of Agriculture)
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22 pages, 4380 KiB  
Article
Utilization of Multisensor Satellite Data for Developing Spatial Distribution of Methane Emission on Rice Paddy Field in Subang, West Java
by Khalifah Insan Nur Rahmi, Parwati Sofan, Hilda Ayu Pratikasiwi, Terry Ayu Adriany, Dandy Aditya Novresiandi, Rendi Handika, Rahmat Arief, Helena Lina Susilawati, Wage Ratna Rohaeni, Destika Cahyana, Vidya Nahdhiyatul Fikriyah, Iman Muhardiono, Asmarhansyah, Shinichi Sobue, Kei Oyoshi, Goh Segami and Pegah Hashemvand Khiabani
Remote Sens. 2025, 17(13), 2154; https://doi.org/10.3390/rs17132154 - 23 Jun 2025
Viewed by 599
Abstract
Intergovernmental Panel on Climate Change (IPCC) guidelines have been standardized and widely used to calculate methane (CH4) emissions from paddy fields. The emission factor (EF) is a key parameter in these guidelines, and it is different for each location globally and [...] Read more.
Intergovernmental Panel on Climate Change (IPCC) guidelines have been standardized and widely used to calculate methane (CH4) emissions from paddy fields. The emission factor (EF) is a key parameter in these guidelines, and it is different for each location globally and regionally. However, limited studies have been conducted to measure locally specific EFs (EFlocal) through on-site assessments and modeling their spatial distribution effectively. This study aims to investigate the potential of multisensor satellite data to develop a spatial model of CH4 emission estimation on rice paddy fields under different water management practices, i.e., continuous flooding (CF) and alternate wetting and drying (AWD) in Subang, West Java, Indonesia. The model employed the national EF (EFnational) and EFlocal using the IPCC guidelines. In this study, we employed the multisensor satellite data to derive the key parameters for estimating CH4 emission, i.e., rice cultivation area, rice age, and EF. Optical high-resolution images were used to delineate the rice cultivation area, Sentinel-1 SAR imagery was used for identifying transplanting and harvesting dates for rice age estimation, and ALOS-2/PALSAR-2 was used to map the water regime for determining the scaling factor of the EF. The closed-chamber method has been used to measure the daily CH4 flux rate on the local sites. The results revealed spatial variability in CH4 emissions, ranging from 1–5 kg/crop/season to 20–30 kg/crop/season, depending on the water regime. Fields under CF exhibited higher CH4 emissions than those under AWD, underscoring the critical role of water management in mitigating CH4 emissions. This study demonstrates the feasibility of combining remote sensing data with the IPCC model to spatially estimate CH4 emissions, providing a robust framework for sustainable rice cultivation and greenhouse gas (GHG) mitigation strategies. Full article
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19 pages, 1200 KiB  
Article
Effects of Rice–Fish Coculture on Greenhouse Gas Emissions: A Case Study in Terraced Paddy Fields of Qingtian, China
by Qixuan Li, Lina Xie, Shiwei Lin, Xiangbing Cheng, Qigen Liu and Yalei Li
Agronomy 2025, 15(6), 1480; https://doi.org/10.3390/agronomy15061480 - 18 Jun 2025
Viewed by 544
Abstract
Rice–fish coculture, a traditional integrated agriculture–aquaculture system, has been recognized as a “Globally Important Agricultural Heritage System” due to its ecological and socio-economic benefits. However, the impact of rice–fish coculture on greenhouse gas emissions remains controversial. This study investigated the effects of rice–fish [...] Read more.
Rice–fish coculture, a traditional integrated agriculture–aquaculture system, has been recognized as a “Globally Important Agricultural Heritage System” due to its ecological and socio-economic benefits. However, the impact of rice–fish coculture on greenhouse gas emissions remains controversial. This study investigated the effects of rice–fish coculture on methane (CH4) and nitrous oxide (N2O) emissions in the Qingtian rice–fish system, a 1200-year-old terraced paddy field system in Zhejiang Province, China. A field experiment with two treatments, rice–fish coculture (RF) and rice monoculture (RM), was conducted to examine the relationships between fish activities, water and soil properties, microbial communities, and greenhouse gas fluxes. Results showed that the RF system had significantly higher CH4 emissions, particularly during the early rice growth stage, compared to the RM system. This increase was attributed to the lower dissolved oxygen levels and higher methanogen abundance in the RF system, likely driven by the grazing, “muddying”, and burrowing activities of fish. In contrast, no significant differences in N2O emissions were observed between the two systems. Redundancy analysis revealed that water variables contributed more to the variation in greenhouse gas emissions than soil variables. Microbial community analysis indicated that the RF system supported a more diverse microbial community involved in methane cycling processes. These findings provide new insights into the complex interactions between fish activities, environmental factors, and microbial communities in regulating greenhouse gas emissions from rice–fish coculture systems. The results suggest that optimizing water management strategies and exploring the potential of microbial community manipulation could help mitigate greenhouse gas emissions while maintaining the ecological and socio-economic benefits of these traditional integrated agriculture–aquaculture systems. Full article
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17 pages, 1053 KiB  
Review
Exploring the Roles of Plant Growth-Promoting Rhizobacteria (PGPR) and Alternate Wetting and Drying (AWD) in Sustainable Rice Cultivation
by Chesly Kit Kobua, Yu-Min Wang and Ying-Tzy Jou
Soil Syst. 2025, 9(2), 61; https://doi.org/10.3390/soilsystems9020061 - 11 Jun 2025
Viewed by 796
Abstract
Rice sustains a large global population, making its sustainable production vital for food security. Alternate wetting-and-drying (AWD) irrigation offers a promising approach to reducing water use in rice paddies but can impact grain yields. Plant growth-promoting rhizobacteria (PGPR) can enhance rice productivity under [...] Read more.
Rice sustains a large global population, making its sustainable production vital for food security. Alternate wetting-and-drying (AWD) irrigation offers a promising approach to reducing water use in rice paddies but can impact grain yields. Plant growth-promoting rhizobacteria (PGPR) can enhance rice productivity under AWD cultivation conditions. This review explores integrating PGPR into AWD systems, focusing on their mechanisms for promoting growth and water stress resilience. It examines diverse microbial communities, particularly bacteria, and their contributions to nutrient acquisition, root development, and other beneficial processes in rice under fluctuating moisture, as well as the influence of AWD on rice’s structural and physiological development. The challenges and opportunities of AWD are also addressed, along with the importance of bacterial selection and interactions with the native soil microbiome. This synthesizes current research to provide an overview of PGPR’s potential to improve sustainable and productive rice cultivation under AWD. Future studies can leverage powerful tools such as e-DNA and NGS for a deeper understanding of these complex interactions. Full article
(This article belongs to the Special Issue Microbial Community Structure and Function in Soils)
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