Search Results (33)

In this study, we analyze a multi-species mutualistic Lotka–Volterra model with Lévy jumps and regime-switching. A defining feature of the work lies in modeling the random environment through state-dependent switching in an infinite countable state space. Our main objective is to establish the sufficient conditions of the extinction and stochastic permanence of the model. First, we analyze the existence and uniqueness of the model’s solution, followed by an examination of the solution’s stochastic ultimate boundedness. Moreover, the challenges arising from state-dependent switching are addressed using the stochastic comparison method. Due to the presence of the jump component, more complex conditions are required to achieve a finite partition of the countably infinite space. Furthermore, the M-matrix theory is also used to obtain the stochastic permanence property. Finally, two specific examples are provided to illustrate the conclusions in this paper. Full article

Probiotics containing Lactobacillus spp. have demonstrated immunological and gastrointestinal benefits and may aid in recovery from mood disorders. However, evidence of their mood-modulating efficacy remains inconsistent. Aim: To analyze the efficacy of probiotic interventions with Lactobacillus spp. in modulating mood in humans. A scoping review was conducted following the PRISMA guidelines. A systematic search of the PubMed and Scopus databases was performed using nine Boolean combinations of the terms “mental”, “mental diseases”, “mental disorders”, “gastrointestinal microbiome”, “gut microbiome”, “gut microbiota”, and “lactobacillus”. The search was limited to clinical trials published in English and limited to ten years of publication. Eligible studies met the following criteria: (a) probiotic interventions in adults, with or without mood disturbances; (b) the use of Lactobacillus spp., either alone or in combination; (c) mood assessment instruments applied pre- and post-intervention; and (d) reporting of probiotic concentrations. Trials involving populations with other psychiatric or neurological diagnoses or those combining probiotics with additional mood-modulating nutrients were excluded. From 3291 records, 17 clinical trials met the inclusion criteria. Data extracted included the author, year, population, country of origin, probiotic strain(s), dosage, intervention mode and duration, and outcomes related to the microbial composition, biomarkers, and microbial metabolites. Trials were categorized by probiotic type (single vs. multi-species) and participant profile (healthy individuals and those with depressive symptoms or specific physiological conditions). Preliminary evidence from single-strain interventions, particularly high-dose L. plantarum administered for ≥8 weeks, suggests potential improvements in anxiety, sleep quality, and inflammatory biomarkers. Multi-species formulations yielded reductions in depressive symptoms and changes in neurobiological markers. Nonetheless, substantial heterogeneity in strains, dosages, durations, and outcome measures limited cross-study comparisons. Lactobacillus spp. interventions show promising mood-modulating potential, especially with specific strains and prolonged administration. Standardized protocols, rigorous controls, and clearly defined clinical cohorts are needed to establish robust, evidence-based recommendations. Full article

Wastewater (WW) treatment using biofilms harboring bacteria and microalgae is considered a promising polishing solution to improve current treatment technologies present in wastewater treatment plants (WWTPs), but their interaction in a sessile community remains to be understood. In this work, multi-species biofilms of Chlorella vulgaris, Chlorella sorokiniana, or Scenedesmus obliquus were selected as representative microalgae species of interest for WW bioremediation, and Rhodococcus fascians, Acinetobacter calcoaceticus, or Leucobacter sp. were selected as the bacteria for co-cultivation in a synthetic WW since they are normally found in WW treatment processes. The attached consortia were developed in specific carriers (K5 carriers) for 168 h, and their biofilm formation ability was evaluated in a profilometer and via scanning electron microscopy (SEM) imaging. From the selected microorganisms, C. sorokiniana was the microalga that adapted best to co-cultivation with R. fascians and A. calcoaceticus, developing a thicker biofilm in these two consortia (3.44 ± 0.5 and 4.51 ± 0.8 µm, respectively) in comparison to the respective axenic cultures (2.55 ± 0.7 µm). In contrast, Leucobacter sp. did not promote biofilm growth in association with C. vulgaris and C. sorokiniana, while S. obliquus was not disturbed by the presence of this bacterium. Some bacterial clusters were observed through SEM, especially in A. calcoaceticus cultures in the presence of microalgae. In some combinations (especially when C. vulgaris was co-cultivated with bacteria), the presence of bacteria was able to increase the number of microalga cells adhered to the K5 carrier. This study shows that biofilm development was distinctly dependent on the co-cultivated species, where synergy in biofilm formation was highly dependent on the microalgae and bacteria species. Moreover, profilometry appears to be a promising method for biofilm analyses. Full article

The study of woody dicot xylem structure in relation to habitats has a long but geographically incomplete history, generating generalizations and questions still in need of expanded data. One understudied area is localized cross-habitat studies under identical climate conditions. Also sparse are intraspecific cross-habitat data. Both of these weaknesses are addressed in the present project for unstudied S. Florida. Six surveys of woody dicot branchlet microtome cross-sections allowed the microscopic comparison of vessel element (VE) diameters and VE densities. The project took place in a small area within short timeframes per survey to assure near uniformity in weather and in seasonal growth cycles. The multispecies Initial Survey and single-species Ximenia americana Survey addressed the question of adjustments in VE diameters and/or VE densities in shaded vs. sunny habitats, finding significant downward average adjustment in VE densities in shaded hammock vs. open pineland habitats (112 shade vs. 182 VE/mm² sun) but not in VE diameters. Single-species (Chrysobalanus icaco, Morella cerifera) surveys examined adjustments in VE diameters and VE densities in swamp vs. scrub (diameter mean: 42.5 µm swamp, 49.2 µm scrub; density means: 179.9 swamp, 154.0 scrub). Chrysobalanus icaco, having arguably the greatest environmental breadth and having the largest mean vessel element diameters in the project, was the sole species to adjust VE diameters only across habitats. Coefficients of variation in VE density exceeded those in VE diameters in every survey. This project sets the stage for future work in Florida and beyond aimed at isolation of environmental variables with respect to xylem traits and aimed at causal mechanisms, especially mode of xylem adjustment in relation to conductive risk. Full article

A fast and green approach for the non-chromatographic assaying of volatile metalorganic compounds (VMOCs) is presented, involving the use of thermal desorption microwave-induced plasma optical emission spectrometry for the multi-species simultaneous determination of VMOCs in wastewater plant samples after headspace solid-phase microextraction (HSSPME-TD-MIP-OES), and optimized as a tool for the assessment of ambient exposure to hazardous VMOC pollutants. With the aim of VMOC monitoring, all species are separated and quantified within 10 s in comparison with about 10–20 min required by conventional GC-based procedures. Calibration against aqueous standards was carried out for several metalorganic species. The method was successfully applied for the quantitative extraction of As, Bi, Hg, Sb, Si and Sn compounds. Limits of detection ranging from 5 to 30 ng L⁻¹ and relative standard deviations lower than 4% were obtained. The method is appropriate for high-sample-throughput measurements, and it proved to be suitable for the analysis of wastewater and sewage sludge samples. Full article

This paper aims to study the influence of the structure of spray holes and throats on the flow field and the internal trajectory of the gas–steam ejection device. The compressible Navier–Stokes equations, discrete ordinate methods and RNG k-ε turbulence model are utilized to simulate the two-phase flow of the rocket gas with multispecies and the water sprays. The comparison between numerical results and experimental data confirms the accuracy and effectiveness of this model. The simulation analysis on the cases of the ejection process with multiple spray hole diameters, number of spray holes, total spray area, and throat diameter are conducted. The shock wave structure inside the gas–steam ejection device is examined. The simulation results show that, instead of the spray hole diameter and number, the total spray area and secondary nozzle throat diameter are the key factors that affect the flow field and internal trajectory of the gas–steam ejection device. Under the existing spray structure, the maximum number of spray holes is 300 to achieve the stability of the flow field and internal ballistic trajectory of gas–steam ejection devices. By comparing the throat diameters of multiple secondary nozzles, it was found that the minimum throat diameter of the secondary nozzles should be no less than 100 mm. The results could be valuable for the design of gas–steam ejection devices. Full article

A series of biocide-containing polyethylene composites were obtained using novel guanidine-containing copolymers immobilized on an inert mineral carrier. Multispecies microbial communities were isolated from the surface of polyethylene samples either incubated or found in the environment, and their taxonomic composition was determined. Biofilms reconstructed using microorganisms obtained from different ecotopes were shown to intensively foul polyethylene surfaces. The presence of polyguanidine biocide suppressed the growth and survival of both binary and multispecies biofilms, with a cumulative effect during long-term incubation. When microorganisms were co-cultivated in binary biofilms, the phenomenon of a decrease in biocide effectiveness was demonstrated. This protective effect is potentially based on cooperative interactions inside the binary biofilm community. Scanning electron microscopy showed a pronounced difference in the architecture of reconstructed biofilms incubated in the presence of biocide in comparison to control samples, where biocide suppressed the formation of dense and well-organized three-dimensional structures. Biofilm disruption by immobilized biocides occurred primarily during the later stages of biofilm formation, probably caused by polycation interaction with their negatively charged extracellular components. Full article

Ecological approaches can help to correct oral microbial dysbiosis and drive the advent and persistence of a symbiotic oral microbiome, which benefits long-term dental caries control. The aim of this study was to investigate the impact of the prebiotic Galacto-oligosaccharide (GOS) on the growth of probiotics L. plantarum 14,917 and its effect on the inhibitory ability of L. plantarum 14,917 against the growth of Streptococcus mutans and Candida albicans in an in vitro model. Single-species growth screenings were conducted in TSBYE broth with 1% glucose and 1–5% GOS. Interaction experiments were performed using duo- and multi-species models with inoculation of 10⁵ CFU/mL S. mutans, 10³ CFU/mL C. albicans, and 10⁸ CFU/mL L. plantarum 14,917 under 1%, 5% GOS or 1% glucose. Viable cells and pH changes were measured. Real-time PCR was utilized to assess expression of C. albicans and S. mutans virulence genes. Six replicates were used for each group. Student’s t-test, one-way ANOVA, and Kruskal-Wallis were employed to compare the outcomes of different groups. GOS significantly inhibited the growth of C. albicans and S. mutans in terms of growth quantity and speed when the two strains were grown individually. However, GOS did not affect the growth of L. plantarum 14,917. Moreover, 1% and 5% GOS enhanced the anti-fungal performance of L. plantarum 14,917 in comparison to 1% glucose. GOS as the carbon source resulted in a less acidic environment in the C. albicans and S. mutans duo-species model and multispecies model where L. plantarum 14,917 was added. When GOS was utilized as the carbohydrate substrate, S. mutans and C. albicans had a significant reduction in the expression of the HWP1, ECE1, atpD, and eno genes (p < 0.05). To our knowledge, this is the first study that reported the ability of GOS to neutralize S. mutans-C. albicans high caries of medium pH and to disrupt virulence gene expression. Moreover, as a prebiotic, GOS augmented the inhibitory ability of L. plantarum against C. albicans in vitro. The current study revealed the anti-caries potential of prebiotics GOS and shed light on novel caries prevention strategies from the perspective of prebiotics and probiotics. These findings provide a rationale for future biofilm or clinical studies to elucidate the effect of GOS on modulating oral microbiota and caries control. Full article

The vertebrate intestinal system consists of separate segments that remarkably differ in morphology and function. However, the origin of intestinal segmentation remains unclear. In this study, we investigated the segmentation of the intestine in a tunicate ascidian species, Ciona savignyi, by performing RNA sequencing. The gene expression profiles showed that the whole intestine was separated into three segments. Digestion, ion transport and signal transduction, and immune-related pathway genes were enriched in the proximal, middle, and distal parts of the intestine, respectively, implying that digestion, absorption, and immune function appear to be regional specializations in the ascidian intestine. We further performed a multi−species comparison analysis and found that the Ciona intestine showed a similar gene expression pattern to vertebrates, indicating tunicates and vertebrates might share the conserved intestinal functions. Intriguingly, vertebrate pancreatic homologous genes were expressed in the digestive segment of the Ciona intestine, suggesting that the proximal intestine might play the part of pancreatic functions in C. savignyi. Our results demonstrate that the tunicate intestine can be functionally separated into three distinct segments, which are comparable to the corresponding regions of the vertebrate intestinal system, offering insights into the functional evolution of the digestive system in chordates. Full article

In search for natural products with antimicrobial properties for use in the prevention and treatment of peri-implantitis, the purpose of this investigation was to evaluate the antimicrobial activity of curcumin and xanthohumol, using an in vitro multi-species dynamic biofilm model including Streptococcus oralis, Actinomyces naeslundii, Veillonella parvula, Fusobacterium nucleatum, Porphyromonas gingivalis and Aggregatibacter actinomycetemcomitans. The antimicrobial activities of curcumin (5 mM) and xanthohumol (100 μM) extracts, and the respective controls, were evaluated with 72-h biofilms formed over dental implants by their submersion for 60 seconds. The evaluation was assessed by quantitative polymerase chain reaction (qPCR), confocal laser scanning microscopy (CLSM) and scanning electron microscopy (SEM). For the data analysis, comparisons were tested applying ANOVA tests with post-hoc Bonferroni corrections to evaluate the antimicrobial activity of both extracts. With qPCR, statistically significant reductions in bacterial counts were observed for curcumin and xanthohumol, when compared to the negative control. The results with CLSM and SEM were consistent with those reported with qPCR. It was concluded that both curcumin and xanthohumol have demonstrated antimicrobial activity against the six bacterial species included in the dynamic in vitro biofilm model used. Full article

Ruminant production systems are major contributors to greenhouse gases emissions, with animal feeding practices being the main cause for methane and nitrous oxide’s release. Although feeding animals forages has been proven to be more sustainable, traditional ryegrass monocultures still require a lot of input (e.g., fertilisers and pesticides). Multi-species swards, consisting of different swards, such as grasses, forage legumes and herbs, need less management and fertiliser, produce more dry matter, and also add a variety of phytochemicals into the animal diet. In particular, polyphenols have been associated with a positive impact on animal health and productivity. However, data on the phenolic composition of multi-species sward components is still scarce, and little is known about the change in concentration over the grazing season. The present study investigated the antioxidant activity of six forage species (perennial ryegrass, timothy, white clover, red clover, chicory and plantain) over the Irish grazing season, using FRAP, DPPH•^• and ORAC assays. The forages were screened for individual phenolic compounds using Liquid-Chromatography-Triple-Quadruple-Mass-Spectrometry. Plantain exhibited the highest antioxidant capacity, being almost one and a half times higher than timothy and double that of chicory. Chlorogenic acid was the most abundant polyphenol in perennial ryegrass, timothy and plantain. Overall, formononetin and biochanin A levels were higher in red clover, white clover and in chicory, in comparison to other forages (p < 0.05). Variations in antioxidant capacity and polyphenol composition were more significant between species (p < 0.01) than between season within species (p > 0.05). This study suggests that multi-species swards, regardless of the grazing month, offer a potential sustainable alternative to monoculture swards with significant antioxidant activity and nutraceutical compounds. Full article

With only periodic and incomplete studies of its diet over time, all with differing methods and conclusions, the degree of omnivory in the bank vole (Clethrionomys glareolus) is not fully clear. We assessed the trophic niche of the species using isotopic (δ¹⁵N and δ¹³C) compositions from hair samples and analysed how C. glareolus shares trophic space with herbivores, granivores and insectivores living syntopically. According to the numbers trapped, C. glareolus was the fourth most numerous species in the apple orchards that we investigated, accounting for 14.4% of all trapped small mammals with a relative abundance of 1.12 individuals per 100 trap nights. The average values of both δ¹⁵N and δ¹³C in the hair of C. glareolus differed from the other trophic groups, with the average of δ¹⁵N in orchards and neighbouring habitats (6.55–6.95‰) being closest to that of insectivores. Intraspecific trophic niche differences (depending on age, gender and reproductive status) were not expressed, while correlations between body mass, body condition index and both δ¹⁵N and δ¹³C values were not consistent. In comparison to analysed basal resources, isotopic signatures in the hair were closest to the values in invertebrates and apple seeds. The degree of omnivory in C. glareolus was not the same in different habitats. This may be an indication of ecological plasticity within the species, allowing its inclusion/success in multi-species small mammal communities. Full article

Very few multi-species or ecosystem comparisons of post-fire vertebrate herbivore activity and food preference exist to inform fire management and conservation strategies. We inferred post-fire (1–3 years) native and introduced vertebrate herbivore activity and attraction to six diverse temperate vegetation communities (grassland to rainforest) from scat counts. We hypothesised that where fire reduced herbaceous and grassy vegetation (‘fodder’), vertebrate herbivores would decline, and that post-fire preferences of native versus exotic herbivores would differ significantly. Instead, we found evidence for a ‘fire and fodder reversal phenomenon’ whereby native macropod and exotic deer scats were more abundant after fire in consistently ‘fodder-poor’ vegetation types (e.g., heath) but less abundant after fire in previously fodder-rich vegetation communities (e.g., grassland). Fodder cover predicted native macropod, wombat, and introduced deer activity and bare ground cover was strongly associated with introduced herbivore activity only, with the latter indicating post-fire competition for food sources due to their abundance in high-altitude open ecosystems. We, therefore, found environmental and vegetation predictors for each individual species/group and suggest broadscale multi-environment, multispecies observations to be informative for conservation management in potentially overlapping post-fire niches. Full article

The present work provides a numerical comparison of different techniques that can be adopted to guarantee sufficient disinfectant residuals in a water distribution network (WDN) when chlorine or chloramine is used as disinfectant. First, while considering chlorine as a disinfectant, the implementation of booster stations in bulk areas and continuous outflows at dead-end nodes was considered. Afterward, the comparison between continuous and intermittent outflows was performed. The water volume being the same, water is provided through blowoffs for 24 h or for limited durations, respectively. Finally, the extent to which the results change was analyzed when chloramine is used instead of chlorine. The methodology is based on the use of the flow routing/water quality modeling software EPANET and its multispecies extension EPANET-MSX on a full-scale WDN. The results show that all the operational measures analyzed are effective to tackle the problem of low disinfectant residuals in WDN. Booster stations are effective to obtain a more uniform distribution of disinfectant throughout the WDN, while nodal blowoffs seem to be a necessary solution for the numerous and scattered dead-end nodes of WDN. The use of chloramine yielded a decrease in the number of blowoffs to open and in blowoff outflows. Full article

Curcuma is of high economic value, credited to its medicinal, edible, and ornamental properties, which possess all signatures of adaptability, and rapid radiation, especially species of Curcuma (Chinese Curcuma, a recent Qinghai–Tibetan Plateau diversification genera) scattered in China. However, little is known about the incongruent phylogenetic signals within this genera from different inheritance patterns that will militate against the further development of this genera. In this research, we applied complete chloroplast genome data together with double-digest restriction site-associated DNA sequencing data (ddRAD-seq) strategy to investigate phylogenetic signals of Chinese Curcuma species, clustering using two RAD analysis pipelines (STACKS and pyRAD). Phylogenetic trees were obtained from each locus based on the maximum likelihood (ML) and multispecies coalescent (BEAST) methods. For visual comparison, multi-method and different datasets were used to infer the phylogeny. We discovered inconsistent relationships for the Chinese Curcuma with varying degrees of support using different methods and datasets. Full article