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Search Results (973)

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Keywords = food-borne bacteria

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18 pages, 950 KB  
Article
Selected Essential Oils Act as Repellents Against the House Cricket, Acheta domesticus
by Torben K. Heinbockel, Rasha O. Alzyoud, Shazia Raheel and Vonnie D. C. Shields
Insects 2026, 17(1), 106; https://doi.org/10.3390/insects17010106 - 16 Jan 2026
Abstract
The house cricket, Acheta domesticus, is found globally. It is an agricultural pest causing economic damage to a wide variety of crops including cereal seedlings, vegetable crops, fruit plants, and stored grains. Additionally, crickets act as mechanical vectors of pathogens by harboring [...] Read more.
The house cricket, Acheta domesticus, is found globally. It is an agricultural pest causing economic damage to a wide variety of crops including cereal seedlings, vegetable crops, fruit plants, and stored grains. Additionally, crickets act as mechanical vectors of pathogens by harboring bacteria, fungi, viruses, and toxins, causing foodborne illnesses. They can contaminate stored grains, packaged foods, or animal feed due to deposition of their feces, lowering the quality of the food and creating food safety risks. Synthetic insect repellents, such as pyrethroids and carbamates, have been used previously in integrated pest management practices to control crickets. Though successful as repellents, they have been associated with health and environmental risks and concerns. The use of organic green repellents, such as plant essential oils, may be a viable alternative in pest management practices. In this study, we tested the effects of 27 plant-based essential oils on the behavior of A. domesticus. A. domesticus were introduced into an open arena to allow them unrestricted movement. A transparent plastic bottle containing an essential oil treatment was placed in the arena to allow voluntary entry by the crickets. Following a predetermined observation period, the number of crickets that entered the bottle was recorded, and percent entry was calculated as the proportion of individuals inside the bottle relative to the total number in the arena. Analysis of the percentage entry into the bottles allowed for a comparative assessment of repellency of the selected essential oils examined in this study. Essential oils that elicited high levels of entry into the bottle were categorized as having weak or no repellency, while those that demonstrated reduced entry were classified as moderate or strong repellents. Our results indicated that A. domesticus responded with strong repellent behavior to nearly half of the essential oils tested, while four essential oils and two synthetic repellents evoked no significant repellent responses. Four strong repellent essential oils, namely peppermint, rosemary, cinnamon, and lemongrass, were tested at different concentrations and showed a clear dose-dependent repellent effect. The results suggest that selected essential oils can be useful in the development of more natural “green” insect repellents. Full article
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14 pages, 2301 KB  
Article
Antimicrobial Properties of Analogs of Dimeric A-Type Proanthocyanidins in Food Matrices
by Antonio Cobo, Alfonso Alejo-Armijo, Daniel Cruz, Cristina Cuadrado and Elena Ortega-Morente
Int. J. Mol. Sci. 2026, 27(2), 853; https://doi.org/10.3390/ijms27020853 - 15 Jan 2026
Viewed by 61
Abstract
Polyphenols with antimicrobial and antibiofilm properties are gaining popularity due to their natural origins and relatively safe nature, and they have met the interest of the food industry because of their possible applicability as food preservatives. We have investigated the effect of different [...] Read more.
Polyphenols with antimicrobial and antibiofilm properties are gaining popularity due to their natural origins and relatively safe nature, and they have met the interest of the food industry because of their possible applicability as food preservatives. We have investigated the effect of different analogs of dimeric A-type proanthocyanidins (PACs) on four food matrix models, including unprocessed meat, fish, vegetables and dairy products previously contaminated with susceptible food pathogens. The best effects were achieved when cherry tomato was used as the food matrix for all the target bacteria (Staphylococcus aureus CECT 828, Listeria innocua CECT 910 and Bacillus cereus UJA27q) and for both temperatures tested (6 and 25 °C). Moreover, several combinations of these analogs also showed synergistic effects, mainly on S. aureus CECT 828, which may allow these antimicrobials to be used at lower levels in food matrices, which would promote their sensory acceptability. However, further studies should be conducted next to understand the mechanisms of these synergistic activities between the phenolic compounds against foodborne pathogens, as well as to ensure the absence of toxic effects when used as food preservatives. Full article
(This article belongs to the Special Issue Biological Study of Plant Bioactive Compounds)
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13 pages, 1384 KB  
Article
Bioprotective Effect of a Bacteriocin-Producing Lactococcus lactis Strain Against Enterococcus faecium Isolated from Egyptian Tallaga Cheese
by Seila Agún, Olivia Youssef, Sally Ashry, Beatriz Martínez, Lucía Fernández, Ana Rodríguez, Youssef Abdelshahid and Pilar García
Antibiotics 2026, 15(1), 81; https://doi.org/10.3390/antibiotics15010081 - 13 Jan 2026
Viewed by 107
Abstract
Background/Objectives: Tallaga cheese is an artisanal form of traditional Egyptian soft white Damietta cheese, characterized by high moisture, elevated salinity, and a limited shelf life, which collectively increase its vulnerability to microbial contamination. Typically produced from raw or minimally heated cow or [...] Read more.
Background/Objectives: Tallaga cheese is an artisanal form of traditional Egyptian soft white Damietta cheese, characterized by high moisture, elevated salinity, and a limited shelf life, which collectively increase its vulnerability to microbial contamination. Typically produced from raw or minimally heated cow or buffalo milk, Tallaga cheese represents a relevant model for studying emerging food safety challenges. Methods/Results: This study revealed marked variability among commercial samples and, unexpectedly, a general absence of typical lactic acid bacteria (LAB) such as Lactococcus spp. Instead, enterococci, microorganisms increasingly associated with antimicrobial resistance and virulence traits, emerged as the dominant LAB group, with the detection of Enterococcus faecium strains posing particular concern for dairy safety. To address these challenges, the antimicrobial potential of isolated LAB was evaluated against Latilactobacillus sakei (CECT 906). Twelve bacteriocin-producing strains were identified: ten Enterococcus faecalis, one E. faecium, and one Lactococcus lactis. Enterococci demonstrated robust tolerance to stress conditions, including high salt concentrations, emphasizing their persistence in dairy environments. Given the relevance of controlling resistant and potentially virulent strains such as E. faecium, the bioprotective capacity of two bacteriocinogenic L. lactis strains (IPLA 1064 and AHRI ST9) was assessed using a laboratory-scale cheese model. Both strains effectively inhibited E. faecium AHRI CH4, achieving reductions of 2.6 and 3.6 log units (99.9%). Conclusions: These findings underscore the relevance of bacteriocin-producing L. lactis as natural biopreservatives to mitigate emerging threats related to antimicrobial-resistant food-borne pathogens in dairy products. Full article
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18 pages, 1082 KB  
Article
Lactic Acid Bacteria from Traditional Fermented Milk: Antimicrobial Potential Against Foodborne Pathogens
by Kaoutar Boussif, Ahmed Elidrissi, Abdelkhaleq Elmoslih, Youssef Ezzaky, Mariem Zanzan and Fouad Achemchem
Appl. Microbiol. 2026, 6(1), 14; https://doi.org/10.3390/applmicrobiol6010014 - 13 Jan 2026
Viewed by 73
Abstract
Lactic acid bacteria (LAB) are increasingly recognized for their role in food biopreservation due to their ability to synthesize antimicrobial compounds. Milk naturally harbors a wide variety of LAB, offering a promising source for identifying strains with biopreservative potential. This study investigated the [...] Read more.
Lactic acid bacteria (LAB) are increasingly recognized for their role in food biopreservation due to their ability to synthesize antimicrobial compounds. Milk naturally harbors a wide variety of LAB, offering a promising source for identifying strains with biopreservative potential. This study investigated the antagonistic effects, safety characteristics, and technological properties of LAB strains isolated from traditionally fermented milk. Thirty-two dairy samples were analyzed, and the resulting LAB isolates were screened for inhibitory activity against Listeria monocytogenes CECT 4032 and Staphylococcus aureus CECT 976 using agar spot and well diffusion assays. All tested strains exhibited strong antimicrobial effects, with particularly notable inhibition of L. monocytogenes. After phenotypic screening, five representative isolates were selected for molecular identification and further assessment of safety-related attributes, functional capabilities, auto- and co-aggregation properties. 16S rRNA gene sequencing revealed that four strains belonged to the genus Enterococcus, specifically, one E. faecium and three E. durans, while one was classified as a Lactococcus species. Moreover, none of the strains showed proteolytic or lipolytic activities which highlights their potential use in dairy fermentation processes. Full article
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39 pages, 1790 KB  
Review
Lactic Acid Bacteria as the Green and Safe Food Preservatives: Their Mechanisms, Applications and Prospects
by Yuwei Zhang, Lianrui Li, Xiaoyang Pang, Shuwen Zhang, Yang Liu, Yunna Wang, Ning Xie and Xu Li
Foods 2026, 15(2), 241; https://doi.org/10.3390/foods15020241 - 9 Jan 2026
Viewed by 173
Abstract
Microbial contamination of food is a crucial cause of food spoilage and foodborne diseases, posing a severe threat to global public health. Although chemical preservatives are effective, their potential hazards to human health and the environment, coupled with the growing demand for “clean [...] Read more.
Microbial contamination of food is a crucial cause of food spoilage and foodborne diseases, posing a severe threat to global public health. Although chemical preservatives are effective, their potential hazards to human health and the environment, coupled with the growing demand for “clean label” products, have driven the search for natural alternatives. Lactic acid bacteria (LAB), recognized as the Generally Recognized as Safe (GRAS) microorganisms, have emerged as the promising bio-preservatives due to their safety, effectiveness, and multifunctionality. This review systematically summarized the core antimicrobial properties of LAB, including their inhibitory spectrum against foodborne pathogens, spoilage microorganisms, viruses, parasites, and their ability to degrade toxic substances such as mycotoxins, pesticides, and heavy metals. Key inhibitory mechanisms of LAB are highlighted, encompassing the production of antimicrobial metabolites, leading to metabolism disruption and cell membrane damage, nutrition and niche competition, quorum-sensing interference, and anti-biofilm formation. Furthermore, recent advances in LAB applications in preserving various food matrices (meat, dairy products, fruits and vegetables, cereals) are integrated, including their roles in enhancing food sensory quality, extending shelf life, and retaining nutritional value. The review also discusses critical factors influencing LAB’s inhibitory activity (medium composition, culture conditions, ionic components, pathway regulator, etc.) and the challenges associated with the application of LAB. Finally, future research directions are outlined, including the novel LAB and metabolites exploration, AI-driven cultural condition optimization, genetic engineering application, nano-encapsulation and active packaging development, and building up the LAB-based cellular factories. In conclusion, LAB and their antimicrobial metabolites hold great promise as green and safe food preservatives. This review is to provide comprehensive theoretical support for the rational improvement and efficient application of LAB-based natural food preservatives, contributing to the development of a safer and more sustainable food processing and preservation systems. Full article
(This article belongs to the Section Food Microbiology)
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20 pages, 2152 KB  
Article
Maize-Derived Lactic Acid Bacteria with Probiotic Traits and Antifungal Activity: Candidate Functional Starter Cultures and Bio-Preservatives
by Adeola O. Aasa, Samkelo Malgas and Mapitsi Silvester Thantsha
Foods 2026, 15(2), 209; https://doi.org/10.3390/foods15020209 - 7 Jan 2026
Viewed by 227
Abstract
Contamination of agricultural products such as maize by fungi is a significant concern worldwide, as it can compromise food safety and quality. In recent years, the use of microorganisms as natural food preservatives has gained interest. Probiotic lactic acid bacteria (LAB) and their [...] Read more.
Contamination of agricultural products such as maize by fungi is a significant concern worldwide, as it can compromise food safety and quality. In recent years, the use of microorganisms as natural food preservatives has gained interest. Probiotic lactic acid bacteria (LAB) and their metabolites are considered a promising strategy to reduce fungal growth and limit other food contaminants. This study aimed to characterize, screen and compare the probiotic properties and antifungal activity of LAB of maize origin. A total of 23 LAB isolates obtained from untreated maize grains were identified through 16S rRNA gene sequencing as Weissella viridenscens (34.7%), Pediococcus pentosaceus (34.7%), Enterococcus durans (17.4%), Leuconostoc citreum (9%), and Enterococcus faecium (4.3%). All isolates demonstrated acid, phenol, and bile salt tolerance; surface hydrophobicity; and antagonistic activity against selected bacterial foodborne pathogens. Notably, Enterococcus sp. showed the strongest inhibitory activity against Escherichia coli ATCC 5211 (21 mm inhibition zone) and Staphylococcus aureus (17 mm inhibition zone), whereas Pediococcus sp. exhibited the highest antagonistic effect against Listeria monocytogenes (18.7 mm inhibition zone). Furthermore, E. durans and P. pentosaceus demonstrated the strongest antifungal activity, effectively inhibiting the growth of Alternaria tenuissima (F22FR) and Fusarium oxysporum (F44FR), respectively. Overall, all the LAB strains isolated from this study showed considerable potential for use in the food industry as probiotics, starter cultures for functional food fermentations, bio-preservatives and biocontrol agents against toxigenic fungi and pathogenic bacteria, with E. durans standing out for its exceptional performance. Future research will explore the ability of these isolates and/or their enzymes to degrade mycotoxins commonly found in maize, a staple food in many African countries. Full article
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20 pages, 1191 KB  
Article
Microarray-Based Serotyping and Molecular Characterization of Virulence and Antimicrobial Resistance of Salmonella enterica from Swine Meat Samples in Abattoirs and Wet Markets of Metro Manila, Philippines
by Rance Derrick N. Pavon, Jonah Feliza B. Mora, Michael Joseph M. Nagpala, Abbie Codia, Homer D. Pantua and Windell L. Rivera
Foods 2026, 15(2), 187; https://doi.org/10.3390/foods15020187 - 6 Jan 2026
Viewed by 204
Abstract
Salmonella is a globally prevalent and diverse group of pathogenic bacteria that reside in food animals, such as swine. They possess transmissible antimicrobial resistance (AMR) and virulence factors, causing outbreaks with varying disease outcomes. This study identified and characterized 110 Salmonella enterica isolates [...] Read more.
Salmonella is a globally prevalent and diverse group of pathogenic bacteria that reside in food animals, such as swine. They possess transmissible antimicrobial resistance (AMR) and virulence factors, causing outbreaks with varying disease outcomes. This study identified and characterized 110 Salmonella enterica isolates from swine meat in abattoirs and wet markets of Metro Manila, Philippines. Thirteen different S. enterica serovars were identified using the Check & Trace microarray platform. The most prevalent were Rissen, Typhimurium 1, 4, [5], 12:i:-, Anatum, and Derby. This study is also the first to report serovar Soerenga in the Philippines and Asia. A high prevalence of virulence genes was observed, namely, hilA (75.45%), avrA (73.64%), mgtC (72.73%), pipB (66.36%), sseC (58.18%), and spi4R (53.64%), with no plasmid-borne spvC and spvR. A high prevalence of blaTEM (44.55%) was also observed, consistent with the phenotypic AMR profiles. Additionally, 14.81% of the isolates exhibited multidrug resistance. Statistical associations and predictions were also found among virulence genes, serovars, and location types, which highlight implications of Salmonella contamination and serovar variations. These findings suggest the need for continuous surveillance of Salmonella, especially for emerging or rare serovars, the deeper investigation of virulence and AMR mechanisms, and improved regulation and sanitation throughout food animal industries. Full article
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22 pages, 3741 KB  
Article
Antimicrobial Effect of Clove Against Foodborne Pathogens in Ground Buffalo Meat During Refrigerated Storage
by Rawan Mohammed Saadeldeen, Amira Ibrahim Zakaria, Mirela Imre, Kálmán Imre, Samir Mohammed Abd-Elghany and Khalid Ibrahim Sallam
Foods 2026, 15(1), 113; https://doi.org/10.3390/foods15010113 - 31 Dec 2025
Viewed by 308
Abstract
Ground meat is highly perishable and has a short shelf life due to microbial contamination with food spoilage bacteria along with foodborne pathogens, which increases the risk of food poisoning. Controlling microbial growth by using chemical or synthetic food additives or preservatives is [...] Read more.
Ground meat is highly perishable and has a short shelf life due to microbial contamination with food spoilage bacteria along with foodborne pathogens, which increases the risk of food poisoning. Controlling microbial growth by using chemical or synthetic food additives or preservatives is of great health concern. Natural, plant-derived antimicrobial food additives are safer alternatives. Therefore, the main objective of this study was to evaluate the antimicrobial efficacy of different forms and concentrations of clove against food spoilage and foodborne pathogens and to determine their ability to enhance sensory quality and extend the shelf life of buffalo meatballs during refrigerated storage. Clove oil (0.25, 0.50, and 1.0 g/kg), clove extract (0.5, 1.0, and 1.5 g/kg), and clove powder (2.5, 5.0, and 7.5 g/kg) were assessed against aerobic plate counts (APCs), psychotropic counts (PCs), and foodborne pathogens such as Staphylococcus aureus, Salmonella enterica serovar Typhimurium, and Escherichia coli O157:H7, artificially inoculated in buffalo meatballs. Clove oil, clove extract, and clove powder treatments showed a significant (p < 0.01) reduction in the counts of S. aureus, S. enterica serovar Typhimurium, and E. coli O157:H7 compared to control samples. Among all tested forms and concentrations of clove, clove oil at 1.0 g/kg proved to be the most effective against the tested pathogens, as by the end of storage (day 12), it achieved 5.3 and 5.56 log reductions in S. aureus and S. enterica serovar Typhimurium, respectively, along with complete reduction in E. coli O157:H7, followed by clove extract at 1.5 g/kg, which produced 4.2, 4.92, and 7.01 log reductions in the corresponding three foodborne pathogens. The results showed that different concentrations of clove oil and extract treatments applied effectively improved the sensory attributes (flavor, tenderness, juiciness, and overall acceptability) of buffalo meatballs, while the sensory properties of clove powder were considered unacceptable, as it alters the taste and smell of meat. The ground buffalo meat treated with different concentrations of clove oil, clove extract, and clove powder significantly reduced the growth of APCs and PCs during refrigerated storage, resulting in 1.5 to 2.6 log reductions with a prolonged shelf life ranging from 9 to 12 days. Overall effects on shelf life and meat quality showed that all clove forms significantly slowed microbial growth and extended the shelf life of buffalo meatballs to 9–12 days, in contrast to 6 days or less for the control. The findings indicate that clove oil and clove extract are promising natural preservatives capable of improving microbial safety, maintaining sensory attributes, and enhancing the overall quality of buffalo meatballs during refrigerated storage. Full article
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17 pages, 574 KB  
Article
The Prevalence of Microorganisms on Vegetables and Fruit from Wet Markets in Chiang Mai Province, Northern Thailand
by Sirikwan Dokuta, Sumed Yadoung, Phadungkiat Khamnoi, Sayamon Hongjaisee, Bajaree Chuttong and Surat Hongsibsong
Foods 2026, 15(1), 80; https://doi.org/10.3390/foods15010080 - 26 Dec 2025
Viewed by 247
Abstract
Foodborne diseases remain a public health issue worldwide. Inadequate attention to food safety and hygiene increases the risk of opportunistic pathogens and resistant bacteria spreading to people through the food chain, leading to foodborne diseases. To investigate food safety in our region, this [...] Read more.
Foodborne diseases remain a public health issue worldwide. Inadequate attention to food safety and hygiene increases the risk of opportunistic pathogens and resistant bacteria spreading to people through the food chain, leading to foodborne diseases. To investigate food safety in our region, this study aims to measure the prevalence of microorganisms on raw food materials randomly purchased from wet markets in Chiang Mai province, Northern Thailand. In this study, microbial cultures, identified by MALDITOF-MS techniques, were used to determine the microflora and antibiotic-resistance organisms on raw vegetables and fruit. Consequently, to confirm antibiotic resistance, the antimicrobial susceptibility techniques were performed. The results found no Salmonella enterica was detected on the overall food samples. For Proteus spp. detection, P. mirabilis were detected at 3.23% in cabbage, 3.57% in Chinese cabbage, and 6.67% in lettuce, while P. vulgaris were detected at 7.14% in Chinese cabbage and 3.57% in peppermint. No Proteus spp. was detected in basils, tomatoes and grapes. In addition, for antibiotic-resistance detection, only ESBL-producing Klebsiella oxytoca was detected in the raw tomato sample (3.57%). According to the study’s findings, people who participate in the food process should be aware of their food safety and hygiene. Full article
(This article belongs to the Section Food Microbiology)
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15 pages, 647 KB  
Article
Biotechnological Characterization and Safety Assessment of Lacticaseibacillus paracasei and Levilactobacillus brevis Strains Carrying entAS-48 and entQ Genes
by Roumaissaa Belkacem, Qada Benameur, Smaranda Crăciun, Hajer Kilani, Claudio Gervasi, George Cosmin Nadăș, Adriana Györke, Mohamed Salah Abbassi and Teresa Gervasi
Fermentation 2026, 12(1), 12; https://doi.org/10.3390/fermentation12010012 - 24 Dec 2025
Viewed by 647
Abstract
In our previous work, we reported for the first time the presence of enterocin-encoding genes in novel Lacticaseibacillus paracasei (L. paracasei) and Levilactobacillus brevis (Lev. brevis) strains isolated from artisanal dairy products made from raw cow milk. The aim [...] Read more.
In our previous work, we reported for the first time the presence of enterocin-encoding genes in novel Lacticaseibacillus paracasei (L. paracasei) and Levilactobacillus brevis (Lev. brevis) strains isolated from artisanal dairy products made from raw cow milk. The aim of this study was to isolate enterocin-positive lactic acid bacteria (LAB) from artisanal dairy products and assess their technological characteristics and safety for potential application in food systems. LAB isolates were characterized using phenotypic tests, Matrix-Assisted Laser Desorption/Ionization Time-of-Flight (MALDI-TOF) identification, and PCR detection of enterocin genes, followed by evaluation of their physiological and technological properties and a comprehensive safety assessment, including antimicrobial resistance, virulence, biogenic amine, and integron genes. Two strains, L. paracasei S2 and Lev. brevis S62, carried enterocin genes (entAS-48 and entQ) and exhibited strong acidifying and proteolytic activities, along with antibacterial effects against foodborne pathogens and reference strains. Both isolates tolerated environmental stresses, including low pH, and lacked virulence factors, clinically relevant antibiotic resistance genes, biogenic amine production, and integron elements. These results indicate that the strains are safe, multifunctional, and suitable for developing regionally adapted dairy products, highlighting artisanal dairy products as a valuable source of novel LAB with promising biotechnological applications. Full article
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17 pages, 863 KB  
Article
Genomic and Phenotypic Landscape of Antibiotic Resistance in Gut Lactic Acid Bacteria from Livestock Environments
by Anna Mikołajczuk-Szczyrba, Karolina Wnęk-Auguścik, Paulina Średnicka, Dziyana Shymialevich, Ewelina Jaroszewska, Adrian Wojtczak, Agnieszka Zapaśnik, Joanna Bucka-Kolendo, Hanna Cieślak and Justyna Nasiłowska
Genes 2025, 16(12), 1518; https://doi.org/10.3390/genes16121518 - 18 Dec 2025
Viewed by 446
Abstract
Background/Objectives: The widespread use of antibiotics in livestock has raised concerns about commensal gut bacteria, such as lactic acid bacteria (LAB), acting as reservoirs for antimicrobial resistance. This study aimed to characterize the antibiotic resistance profiles of LAB isolated from livestock feces by [...] Read more.
Background/Objectives: The widespread use of antibiotics in livestock has raised concerns about commensal gut bacteria, such as lactic acid bacteria (LAB), acting as reservoirs for antimicrobial resistance. This study aimed to characterize the antibiotic resistance profiles of LAB isolated from livestock feces by combining phenotypic susceptibility testing with whole-genome sequencing (WGS) to identify antibiotic resistance genes (ARGs) and their genomic context. Methods: Four LAB strains from farm animal fecal samples were subjected to antibiotic susceptibility testing for 9 antibiotics (ampicillin, gentamicin, kanamycin, clindamycin, chloramphenicol, erythromycin, streptomycin, tetracycline, and vancomycin) using MIC determinations. WGS was performed on each isolate to detect ARGs using curated databases and to determine the chromosomal or plasmid location of these genes. Results: All four isolates exhibited phenotypic resistance to at least one antibiotic class, most frequently to aminoglycosides. However, discrepancies between phenotype and genotype were noted: resistance to aminoglycosides was common despite the absence of known aminoglycoside-resistance genes, suggesting intrinsic, uptake-related mechanisms. In contrast, one strain carried the chromosomal lsa(D) gene but remained susceptible to clindamycin. WGS revealed that all strains harbored the chromosomal van(T) gene, while one isolate carried three additional plasmid-borne ARGs—erm(B), cat(A), and tet(W)—conferring resistance to macrolide–lincosamide–streptogramin antibiotics, chloramphenicol, and tetracycline. Another strain encoded van(Y), lsa(D), and arr on its chromosome. The detection of multiple plasmid-located ARGs in a single LAB isolate highlights their potential for horizontal gene transfer. Conclusions: This study provides a detailed phenotypic and genomic insight into antibiotic resistance in gut-derived LAB from livestock. The findings highlight that commensal LAB can harbor clinically relevant ARGs—sometimes on mobile genetic elements—without always expressing corresponding resistance phenotypes. Such LAB may serve as a hidden reservoir for antibiotic resistance, raising the risk of ARG dissemination through the food chain. These results underscore the importance of vigilant monitoring and genomic screening of LAB, especially those considered for use in foods or feed, to ensure they do not contribute to the spread of antimicrobial resistance. Full article
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23 pages, 803 KB  
Review
Presence of Major Bacterial Foodborne Pathogens in the Domestic Environment and Hygienic Status of Food Cleaning Utensils: A Narrative Review
by Antonia Mataragka, Rafaila Anthi, Zoi-Eleni Christodouli, Olga Malisova and Nikolaos D. Andritsos
Hygiene 2025, 5(4), 60; https://doi.org/10.3390/hygiene5040060 - 18 Dec 2025
Viewed by 769
Abstract
Ensuring optimal food hygiene is essential for food safety and preventing foodborne illness, although the importance of food hygiene is often overlooked in the household kitchen setting. Adequate, good hygiene practices in the domestic environment are equally important as their implementation in any [...] Read more.
Ensuring optimal food hygiene is essential for food safety and preventing foodborne illness, although the importance of food hygiene is often overlooked in the household kitchen setting. Adequate, good hygiene practices in the domestic environment are equally important as their implementation in any other food preparation environment, like in the food industry. The current review encompasses research data on the prevalence and isolation of major foodborne pathogenic bacteria (Campylobacter, Salmonella, Listeria monocytogenes, Staphylococcus aureus, Escherichia coli pathotypes, and Clostridium perfringens) from household kitchen equipment, as well as food cleaning utensils used in the kitchen, such as sponges, brushes, dishcloths, and hand towels. The most common bacterial pathogen present in the domestic environment is S. aureus. The latter can be transmitted orally, either via direct hand contact with contaminated kitchen surfaces and/or cleaning utensils, or indirectly through the consumption of contaminated food due to cross-contamination during food preparation (e.g., portioning prepared meat on the same cutting board surface and with the same knife previously used to cut fresh leafy vegetables). Moreover, research findings on the hygiene of food cleaning utensils demonstrate that (i) sponges have the highest microbial load compared to all other cleaning utensils, (ii) brushes are less contaminated and more hygienic than sponges, thus safer for cleaning cutlery and kitchen utensils, and (iii) kitchen dishcloths and hand towels positively contribute to cross-contamination since they are frequently used for multiple purposes at the same time (e.g., drying hands and wiping/removing excess moisture from dishes). Finally, the present review clearly addresses the emerging issue of antimicrobial resistance (AMR) in bacterial pathogens and the role of the domestic kitchen environment in AMR dissemination. These issues add complexity to foodborne risk management, linking household practices to broader AMR stewardship initiatives. Full article
(This article belongs to the Section Food Hygiene and Safety)
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10 pages, 3543 KB  
Article
Incidence of Bacterial Chondronecrosis with Osteomyelitis Lameness in Commercial Duck Flocks in Mojokerto, Indonesia
by Andi Asnayanti, Siti Azizah, Anif Mukaromah Wati, Ahmad Ridwan, Ahmad Arman Dahlan, Dinda Rosalita Asmara, Anh Dang Trieu Do and Adnan Alrubaye
Animals 2025, 15(24), 3632; https://doi.org/10.3390/ani15243632 - 17 Dec 2025
Viewed by 399
Abstract
Bacterial Chondronecrosis with Osteomyelitis (BCO) lameness is an infection of opportunistic bacteria in the structural skeletal bones impacting multiple animal species, particularly poultry species. BCO lameness results in significant financial losses to industrial poultry production and increases the risk of foodborne illnesses, posing [...] Read more.
Bacterial Chondronecrosis with Osteomyelitis (BCO) lameness is an infection of opportunistic bacteria in the structural skeletal bones impacting multiple animal species, particularly poultry species. BCO lameness results in significant financial losses to industrial poultry production and increases the risk of foodborne illnesses, posing a major threat to consumers’ food safety. As BCO lameness is an inherent risk of fast body weight gain in poultry species, especially broiler chickens, abundant studies have been conducted in broilers and turkeys. Nevertheless, BCO lameness incidence in ducks remains elusive. Thus, this is the first survey investigating the prevalence of BCO lameness cases in ducks. The survey was conducted in commercial duck farms in Indonesia, the fourth biggest duck-producing country globally. Two hundred birds from four commercial duck farms in Mojokerto, East Java, Indonesia, were necropsied to examine their lameness lesions in the femoral head and proximal tibia. Of the 44% birds showing BCO lameness lesions, 3% were evidently clinically lame birds, particularly exhibiting limping gait. Femoral head separation (FHS) and tibial head necrosis (THN) are the most frequently observed lesions in ducks, representing a mild-to-moderate BCO lameness state. Based on the results of this study, intervention measures to boost the immune system and skeletal bone integrity of ducks are urgently required. Full article
(This article belongs to the Special Issue Common Infectious Diseases in Poultry)
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21 pages, 4884 KB  
Article
Role of the PhoP/PhoQ Two-Component Regulatory System in Biofilm Formation in Acid-Adapted Salmonella typhimurium
by Huixuan Yang, Xueqing Jiang, George-John E. Nychas, Kehui Yang, Pengcheng Dong, Yimin Zhang, Lixian Zhu and Yunge Liu
Foods 2025, 14(24), 4344; https://doi.org/10.3390/foods14244344 - 17 Dec 2025
Viewed by 376
Abstract
Salmonella typhimurium is a global foodborne pathogen, and controlling its persistence is critical for public health. This study investigated the regulatory role of the PhoP/PhoQ two-component system (TCS) in biofilm formation under the acid adaptation condition. A phoP deletion strain (ΔphoP) [...] Read more.
Salmonella typhimurium is a global foodborne pathogen, and controlling its persistence is critical for public health. This study investigated the regulatory role of the PhoP/PhoQ two-component system (TCS) in biofilm formation under the acid adaptation condition. A phoP deletion strain (ΔphoP) was constructed and compared with the wild type (WT) after acid induction (pH 5.4). Without acid adaptation, ΔphoP and WT showed similar acid tolerance and biofilm formation. However, after acid induction, ΔphoP exhibited markedly reduced biofilm formation, swimming ability, metabolic activity, and extracellular polymer production. RNA-seq analysis further revealed defects in ΔphoP under acid-induced conditions: (i) first leads to downregulation of lipopolysaccharide biosynthesis, peptidoglycan synthesis, and cationic antimicrobial peptide resistance pathways, thereby weakening the bacteria’s envelope modification capacity and structural stability; (ii) it also disrupts signal regulations in acidic environments, further impairing energy metabolism, flagellar function, and chemotaxis, thereby affecting bacterial adhesion capacity and environmental adaptability. These results demonstrate that under acid adaptation, the PhoP/PhoQ TCS is critical for coordinating cell envelope remodelling, energy metabolism, and motility to support biofilm formation in S. typhimurium. Understanding the contribution of this system to biofilm formation is essential for addressing the stress resistance and persistence of Salmonella in the food industry. Full article
(This article belongs to the Special Issue Biofilm Formation and Control in the Food Industry)
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22 pages, 748 KB  
Review
Lactic Acid Bacteria Isolated from Traditional Dry-Cured Fermented Foods with Probiotic Effect: Selection, Mechanisms of Action and Applications
by José M. Martín-Miguélez, Belén Peromingo, Cristina Castaño, Juan J. Córdoba, Josué Delgado and Irene Martín
Foods 2025, 14(24), 4332; https://doi.org/10.3390/foods14244332 - 16 Dec 2025
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Abstract
Traditional dry-cured and fermented foods are part of the diet of many countries all over the world. These products are a source of lactic acid bacteria (LAB). Some of the LAB isolated from these products have a variety of probiotic effects on the [...] Read more.
Traditional dry-cured and fermented foods are part of the diet of many countries all over the world. These products are a source of lactic acid bacteria (LAB). Some of the LAB isolated from these products have a variety of probiotic effects on the consumers, among others, maintaining gastrointestinal homeostasis, enhancing immunity, providing antioxidant effects, preventing vaginal and urinary tract infections, and treating obesity. In addition, LAB has antagonistic properties against human pathogens and foodborne bacteria. This review summarizes methods for isolation, characterization, and selection of LAB with probiotic effects. Besides the effect of the selected probiotic LAB, focusing on gastrointestinal adhesion and colonization, and the described mechanisms of action, emphasizing their potential to advance nutritional innovations, will also be discussed. Furthermore, the advantages of the application of selected probiotic LAB in traditional dry-cured and fermented foods and in plant-based analogues will also be reviewed. Full article
(This article belongs to the Special Issue Feature Reviews on Food Microbiology)
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