Search Results (36)

Circadian clocks are endogenous timing systems that coordinate plant physiology, metabolism, development, and stress responses with daily and seasonal environmental cycles. In crops, circadian and photoperiodic pathways influence agronomically important traits including photosynthesis, carbon allocation, flowering time, growth, stress resilience, and nutritional quality. Although flowering time and photoperiod response pathways have long been indirectly exploited during domestication and breeding, the broader potential of circadian regulation for crop improvement and time-sensitive management remains only partially developed. This review examines the role of plant circadian clocks in crop productivity, with emphasis on molecular mechanisms, crop-specific clock-associated loci, breeding strategies, and chrono-agricultural applications. We summarize conserved and divergent features of the plant clock, including transcriptional repression and activation modules, environmental entrainment, and post-transcriptional regulatory layers. We then discuss how circadian regulation shapes productivity traits and highlight examples from rice, wheat, barley, maize, soybean, sorghum, tomato, and other crops. These examples show that agricultural adaptation often involves fine-tuning or rewiring circadian and photoperiodic outputs rather than maintaining a universal optimal clock state. Finally, we evaluate chrono-agriculture as an emerging framework for aligning management practices with biological timing. While controlled-environment agriculture and high-value horticultural systems are currently the most practical settings for testing chrono-agricultural strategies, open-field applications require careful consideration of environmental variability, sensor limitations, labour, machinery logistics, economic feasibility, and multi-environment validation. Integrating circadian biology with crop genetics, phenotyping, modelling, and agronomy may provide new opportunities to improve productivity, resilience, resource-use efficiency, and quality traits in sustainable agricultural systems. Full article

Phosphorus (P) limitation is a major selective pressure in plant evolution and a persistent constraint on modern crop production. However, how domestication has reshaped P adaptation strategies remains poorly understood. Here, we compared wild (Solanum pimpinellifolium) and cultivated (Solanum lycopersicum) tomatoes under contrasting P conditions using integrated physiological, ionomic, and transcriptomic analyses. Our findings reveal distinct P strategies between the examined genotypes. Cultivated tomatoes achieved higher biomass under sufficient P supply but were highly sensitive to P deficiency, responding through acquisition-driven phenotypic plasticity characterized by extensive root remodeling and enhanced external P mobilization. In contrast, wild accessions maintained growth and higher P use efficiency under low P by relying on an optimized internal P management strategy, including efficient P uptake, preferential allocation to photosynthetically active tissues, and effective remobilization from older leaves. Consistently, ionomic profiling revealed that wild tomatoes preserved coordinated macro- and micronutrient homeostasis under P stress. Tissue-specific transcriptomic analyses further uncovered pronounced divergence in P-responsive regulation, with cultivated tomatoes showing predominantly root-centered responses, whereas wild accessions exhibited strong activation in old source leaves. This tissue-specific specialization was accompanied by a putative regulatory divergence, with HD-ZIP transcription factors enriched in cultivated tomatoes and G2-like and bHLH factors central in wild accessions. Together, our results indicate that modern cultivars exhibit a stronger reliance on external P acquisition and greater growth sensitivity under sustained P limitation compared to wild accessions, which showed relatively more stable internal P allocation patterns, highlighting wild germplasm as a resource for improving crop P efficiency. Full article

Fluopyram is a widely used nematicide with a growing number of varieties registered both domestically and overseas. However, its absorption, transportation, and metabolism behaviors in plants have not been fully elucidated, thus hindering comprehensive assessment of the risks associated with its use. This study investigated the plant uptake, distribution, and metabolic behavior of fluopyram through 168 h hydroponic experiments. Fluopyram was easily absorbed by the roots of the tested crops, and almost 90.5% and 70.9% of fluopyram was transformed in cucumber and tomato, respectively, leading to the tentative identification of 16 metabolites using Quadrupole Time-of-Flight mass spectrometry. The metabolic reactions involved were hydroxylation, hydroxylation–dechlorination, dehydrogenation, dechlorination, and glucuronidation conjugation. Most metabolites were detected in leaves, suggesting that they have considerable potential to accumulate in the upper parts, even the edible parts. Model prediction indicated that fluopyram and high-toxicity metabolites (M430A, M412C) pose significant risks to aquatic ecosystems across trophic levels, while M574A and M574B showed reduced toxicity due to glucuronidation conjugation. These findings deepen our understanding of the behavioral characteristics of fluopyram within plants, and serve as an important reference for comprehensively assessing its risks. Full article

Glycosylation plays a critical role in maintaining cardiac structure and function, yet its modulation during aging and hypertrophic cardiomyopathy (HCM) in feline hearts remains uncharacterized. This study provides a systematic analysis of lectin-binding patterns in feline myocardium across different age groups and disease states. Post-mortem feline hearts (n = 64), classified by age (newborn to senior) and diagnostic status (healthy vs. HCM-affected), were evaluated using tissue microarrays stained with five plant-derived lectins—Concanavalin A (ConA), Wheat Germ Agglutinin (WGA), RCA (Ricinus communis Agglutinin I), Tomato (Lycopersicon esculentum Agglutinin), and Griffonia (Bandeiraea) simplicifolia Lectin I (BS)—alongside Draq5 nuclear counterstaining. Lectin histochemistry revealed distinct, region-specific glycosylation patterns, with notable remodelling in both aged and HCM-affected hearts. These glycan alterations reflect underlying molecular and structural changes associated with cardiac aging and pathology. Although lectin histochemistry has been used to examine cardiac glycosylation in species such as mice, rats, zebrafish, and humans, comparable data for felines have been lacking, even if domestic cat represents a spontaneous model for human HCM. This study provides the first essential step in characterizing the feline cardiac glycosylation. The observed shifts in lectin-binding profiles reveal specific remodelling associated with aging and HCM in cats. These results provide a foundation for future studies assessing the utility of glycan motifs as potential post-mortem markers of disease progression in felines. Full article

Modern, technologically advanced fertilizers that increase the efficiency of the plant’s use of macro and microelements while reducing the doses used are one of the most important elements of sustainable plant production. Current European Union policy, especially the from-farm-to-fork strategy, which is part of the European Green Deal and sustainable agriculture, requires producers to seek new solutions that will ensure higher yields while reducing the number and volume of fertilizers and pesticides introduced into the environment. The aim of conducted research was to determine the effect of the application of Techno Z (sulphur 67% + zinc 14%), an advanced microgranular sulphur/zinc fertilizer with patented ORT technology on greenhouse-grown tomato, one of the most popular vegetables grown worldwide. Consumption is constantly growing, and demand is much higher in many countries than domestic production. Therefore, measures aimed at increasing yields, such as more effective, sustainable fertilization, are extremely important. Full article

The domestication process not only reduced the allelic diversity of tomato genotypes but also affected the genetic traits associated to microbial recruitment, their composition, and their diversity in different compartments of the plant host. Additionally, this process included the transition from natural to agricultural soils, which differ in nutrient availability, physicochemical properties, and agricultural practices. Therefore, modern cultivars may fail to recruit microbial taxa beneficial to their wild relatives, potentially losing important ecological functions. In this study, we analyzed the phylogenetic relationship and the rhizosphere microbiota of four tomato genotypes, Solanum chilense (wild species), S. lycopersicum var. cerasiforme (Cherry tomato), and the S. lycopersicum landrace ‘Poncho Negro’ and the modern cultivar ‘Cal Ace’, grown in both natural and agricultural soils. Microbial communities were identified using 16S rRNA (bacteria) and ITS2 (fungi) amplicon sequencing, allowing cross-domain taxonomic characterization. While the soil type was the main driver of overall microbial diversity, the host genotype influenced the recruitment of specific microbial taxa, which exhibited different recruitment patterns according to the genetic diversification of Solanum genotypes and soil types. Additionally, co-occurrence network analysis identified two main clusters: first, taxa did not show any preferential associations to particular genotypes or soil types, while the second cluster revealed specific microbial patterns associated to fungal taxa in natural soil and bacterial taxa in agricultural soil. Finally, the functional analysis suggested the loss of specific functions through tomato domestication independently of soil type. These findings highlight the role of the plant genotype as a fine-tuning factor in microbiome assembly, with implications for breeding strategies aimed at restoring beneficial plant–microbe interactions. Full article

The adoption of grafting machines has become an essential trend in the advancement of the vegetable nursery industry, driven by the aging population and the rapid growth of the vegetable sector. Domestic and foreign research organizations have designed various types of vegetable grafting devices for the huge nursery market. However, most of the machines developed and designed at home and abroad are now semi-automated and are thus highly susceptible to damaging the stems of the seedlings during operation. Therefore, in order to realize the complete automation of the grafting operation and improve the grafting survival rate and quality, in this paper, eggplant hole tray seedlings were grafted as the object, and the cutting mechanism, the integrated mechanism of clamping and fitting, and the wrapping mechanism were structured on the basis of the affixing method. The transition conversion from semi-automatic to fully automatic was realized. And the rationality of the design was verified via the cutting test and the clamping characteristic test, which maximized the fit rate between the cutting surface of the rootstock and the scion seedling and maximized the protection of the grafted seedling from damage in the clamping process. Finally, the device was tested using Torubam rootstock and a Nova 101 tomato scion. The results showed that the optimal cutting angles were 35° and 30° for rootstock and scion, respectively, and that the lengths of the cutting surfaces were 11.28 ± 0.18 mm and 11.43 ± 0.14 mm. The grafting efficiency of the machine was up to 700 grafts per hour, with an average grafting success rate of up to 95% and zero stem damage to the seedlings. The experiments proved that the structure design of the machine is reasonable, and it can fully improve the grafting efficiency and quality. Meanwhile, the research findings can provide a theoretical basis for the application of the latter in the field of plant grafting. The research results can effectively alleviate the dependence on manual labor in the nursery industry and further liberate the labor force. Full article

Pests and diseases have caused significant problems since the domestication of crops, resulting in economic loss and hunger. To overcome these problems, synthetic pesticides were developed to control pests; however, there are significant detrimental side effects of synthetic pesticides on the environment and human health. There is an urgent need to develop safer and more sustainable pesticides. Industrial hemp is a reservoir of compounds that could potentially replace some synthetic bactericides, fungicides, and insecticides. We determined the efficacy of industrial hemp extracts against Pseudomonas syringae pv. tabaci (PSTA), Pseudomonas syringae pv. tomato (PSTO), and Erwinia carotovora (EC). The study revealed a minimum inhibitory concentration (MIC) of 2.05 mg/mL and a non-inhibitory concentration (NIC) of 1.2 mg/mL for PSTA, an MIC of 5.7 mg/mL and NIC of 0.66 mg/mL for PSTO, and an MIC of 12.04 mg/mL and NIC of 5.4 mg/mL for EC. Time-kill assays indicated the regrowth of E. carotovora at 4 × MIC after 15 h and P. syringae pv. tomato at 2 × MIC after 20 h; however, P. syringae pv. tabaci had no regrowth. The susceptibility of test bacteria to hemp extract can be ordered from the most susceptible to the least susceptible, as follows: P. syringae pv. tabaci > P. syringae pv. tomato > E. carotovora. Overall, the data indicate hemp extract is a potential source of sustainable and safe biopesticides against these major plant pathogens. Full article

When plant-available phosphorus (P) is lost from a soil solution, it often accumulates in the soil as a pool of unavailable legacy P. To acquire legacy P, plants employ recovery strategies, such as forming associations with soil microbes. However, the degree to which plants rely on microbial associations for this purpose varies with crop domestication and subsequent breeding. Here, by generating microbial co-occurrence networks, we sought to explore rhizosphere bacterial interactions in low-P conditions and how they change with tomato domestication and breeding. We grew wild tomato, traditional tomato (developed circa 1900), and modern tomato (developed circa 2020) in high-P and low-P soil throughout their vegetative developmental stage. Co-occurrence network analysis revealed that as the tomatoes progressed along the stages of domestication, the rhizosphere microbiome increased in complexity in a P deficit. However, with the addition of P fertilizer, the wild tomato group became more complex, surpassing the complexity of traditional and modern tomato, suggesting a high degree of responsiveness in the rhizosphere microbiome to P fertilizer by wild tomato relatives. By illustrating these changing patterns of network complexity in the tomato rhizosphere microbiome, we can further understand how plant domestication and breeding have shaped plant–microbe interactions. Full article

Salinity stress impairs growth and physiological performance in tomato, which is one of the most economically important vegetables and is widely cultivated in arid and semi-arid areas of the world. Plant landraces, which are heterogeneous, local adaptations of domesticated species, offer a unique opportunity to valorize available germplasm, underpinning the productivity, resilience, and adaptive capacity of staple crops in vulnerable environments. Here, we investigated the response of fully mature tomato plants from a commercial variety, an ancestral wild relative, and a landrace under short-term salinity exposure, as well as their ability to recover upon cessation of stress. The heterogeneous panel evaluated in this study revealed different adaptative strategies to cope the stress. Our data highlighted the ability of the tomato clade to handle low and intermediate salinity stress for short-term exposure time, as well as its capacity to recover after the cessation of stress, although inter- and intraspecific variations in morphological and physiological responses to salinity were observed. Overall, the landrace and the wild type performed similarly to control conditions under low salinity, demonstrating an improved ability to maintain ionic balance. In contrast, the commercial genotype showed susceptibility and severe symptoms even under low salinity, with pronounced reductions in K⁺/Na⁺ ratio, PSII photochemical efficiency, and photosynthetic pigments. This research confirmed that improved salt tolerant genotypes can lead to substantial, positive impacts on horticultural production. While the salt tolerance mechanism of domesticated tomato was efficient under mild stress conditions, it failed at higher salinity levels. Full article

The use of gene-editing tools, such as zinc finger nucleases, TALEN, and CRISPR/Cas, allows for the modification of physiological, morphological, and other characteristics in a wide range of crops to mitigate the negative effects of stress caused by anthropogenic climate change or biotic stresses. Importantly, these tools have the potential to improve crop resilience and increase yields in response to challenging environmental conditions. This review provides an overview of gene-editing techniques used in plants, focusing on the cultivated tomatoes. Several dozen genes that have been successfully edited with the CRISPR/Cas system were selected for inclusion to illustrate the possibilities of this technology in improving fruit yield and quality, tolerance to pathogens, or responses to drought and soil salinity, among other factors. Examples are also given of how the domestication of wild species can be accelerated using CRISPR/Cas to generate new crops that are better adapted to the new climatic situation or suited to use in indoor agriculture. Full article

Solanum lycopersicum, the domesticated species of tomato, is produced and consumed globally. It is one of the most economically important vegetable crops worldwide. In the commercial production of tomatoes, tomatoes are extremely sensitive to herbicide drifts from row crops in the vicinity. Injury to tomatoes from auxin herbicides and glyphosate can occur at rates as low as 0.01×. This results in a substantial yield reduction, and at high drift rates, plants may not show signs of recovery. With the new herbicide-resistant crop technologies on the market, which include 2,4-D and dicamba-resistant crops, there is an increase in the usage of these herbicides, causing more serious drift problems. There is a diverse germplasm of tomatoes that includes wild relatives which are tolerant to numerous biotic and abiotic stresses. Herbicide/chemical stress is an abiotic stress, and wild tomato accessions may have a natural tolerance to herbicides and other abiotic stresses. In the current study, diverse tomato genotypes consisting of 110 accessions representing numerous species, Solanum habrochaites, S. cheesmaniae, S. pimpinellifolium, S. chilense, S. lycopersicum, S. pimpinellifolium, S. galapagense, S. chimelewskii, S. corneliomulleri, S. neorickii, and S. lycopersicoides, were used for screening drift rate herbicide tolerance. The herbicides tested included simulated drift rates of 2,4-D, dicamba, glyphosate, quinclorac, aminopyralid, aminocyclopyrachlor, and picloram. The visual injury rating of each accession for each herbicide treatment was taken 7, 14, 21, and 28 days after treatment (DAT) on a scale of 0–100%. Numerous accessions were found to have minimal injury (less than 20%) for each of the herbicides tested; nine accessions were found for both 2,4-D and glyphosate, eleven for dicamba, five for quinclorac, eight for aminocyclopyrachlor and two for both aminopyralid and picloram at 28 DAT. The identification of genotypes with a higher herbicide tolerance will provide valuable genetic resources for the development of elite tomato varieties that can resist herbicide injury and produce competitive yields. Full article

Plant cuticular wax plays an important role in resistance to environmental stresses. Eceriferum (CER) genes are involved in wax synthesis. However, little information is available for tomato species. In this study, 26 SlCER genes were identified in tomato (S. lycopersicum), and they were classified into four clades. The physicochemical properties and conserved motifs of their proteins were predicted. These SlCERs were mainly expressed in leaves, flowers or fruits, and most SlCERs played roles in response to abiotic stresses, especially drought stress. Furthermore, the changes in haplotypes indicated that SlCERs might have been involved in adapting to the environments for wild species S. pimpinellifolium before domestication. These findings would lay a foundation for future functional studies of SlCERs and also provide insights for anti-stress improvement in tomato in the near future. Full article

This study deals with arsenic distribution in groundwater, soil and edible vegetables in the densely populated area of the Versilia Plain (Tuscany region, Italy), addressing potential impacts on people’s health. The data revealed high As concentrations in some domestic irrigation wells, exceeding 1200 µg/L. The average As concentration in topsoil and subsoil was 39 and 46 mg/kg, respectively, with the highest concentration reaching about 200 mg/kg. Arsenic concentrates in plant roots compared with the edible parts; in tomato fruits, black cabbage leaves and edible leek parts As reached about 0.2 mg/kg, 0.4 mg/kg and 3 mg/kg, respectively. Geochemical and hydrostratigraphic data suggest that As in soils and alluvial sediments originated from mineralized and historical upstream mining areas. The exposure routes for both non-carcinogenic and carcinogenic risk assessment here considered include soil ingestion, dermal absorption, soil dust inhalation and vegetable consumption. For non-carcinogenic and carcinogenic effects, the hazard was higher than the acceptance threshold. The calculated soil screening levels resulted even lower than the guideline soil-concentration imposed by Italian regulations, and this poses an issue on the actual meaning of arsenic regulatory thresholds. Full article

Complex interactions between host plant resistance (HPR) and biological control agents, particularly omnivorous predators, can shape the outcome of an integrated pest management (IPM) program. However, such interactions are seldom explored during plant breeding programs. Therefore, in the present study, we compared the performance of the omnivorous biological control agent Orius laevigatus on six tomato genotypes with different levels of resistance to the tomato leaf miner Phthorimaea absoluta. We found that the O. laevigatus fitness components (i.e., egg deposition, egg hatching rate, and duration of egg, early nymphal, late nymphal stages, and their survival) were inferior on the wild resistant genotypes (LA 716 and LA 1777) in comparison to the resistant domesticated genotype EC 620343 and the susceptible genotypes (EC 705464 and EC 519819). It appears that the adverse effects of tomato genotypes on O. laevigatus are determined mainly by glandular and non-glandular trichome densities on the leaves. Comparison of O. laevigatus response to the tested tomato cultivars to that of P. absoluta revealed significant positive correlations in duration of the egg stages, development time of early and late larval stages, and overall immature mortality in both species. It appears, therefore, that defensive plant traits operate in a similar way on the pest and its predator in the system. Overall, the present study of the tomato-P. absoluta-O. laevigatus system provides experimental evidence for the need to optimize pest management by employing intermediate levels of crop resistance together with biological control agents. Full article