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18 pages, 853 KiB  
Article
Elucidating Genotypic Variation in Quinoa via Multidimensional Agronomic, Physiological, and Biochemical Assessments
by Samreen Nazeer and Muhammad Zubair Akram
Plants 2025, 14(15), 2332; https://doi.org/10.3390/plants14152332 - 28 Jul 2025
Abstract
Quinoa (Chenopodium quinoa Willd.) has emerged as a climate-resilient, nutrient-dense crop with increasing global popularity because of its adaptability under current environmental variations. To address the limited understanding of quinoa’s genotypic performance under local agro-environmental conditions, this study hypothesized that elite genotypes [...] Read more.
Quinoa (Chenopodium quinoa Willd.) has emerged as a climate-resilient, nutrient-dense crop with increasing global popularity because of its adaptability under current environmental variations. To address the limited understanding of quinoa’s genotypic performance under local agro-environmental conditions, this study hypothesized that elite genotypes would exhibit significant variation in agronomic, physiological, and biochemical traits. This study aimed to elucidate genotypic variability among 23 elite quinoa lines under field conditions in Faisalabad, Pakistan, using a multidimensional framework that integrated phenological, physiological, biochemical, root developmental, and yield-related attributes. The results revealed that significant variation was observed across all measured parameters, highlighting the diverse adaptive strategies and functional capacities among the tested genotypes. More specifically, genotypes Q4, Q11, Q15, and Q126 demonstrated superior agronomic potential and canopy-level physiological efficiencies, including high biomass accumulation, low infrared canopy temperatures and sustained NDVI values. Moreover, Q9 and Q52 showed enhanced accumulation of antioxidant compounds such as phenolics and anthocyanins, suggesting potential for functional food applications and breeding program for improving these traits in high-yielding varieties. Furthermore, root trait analysis revealed Q15, Q24, and Q82 with well-developed root systems, suggesting efficient resource acquisition and sufficient support for above-ground plant parts. Moreover, principal component analysis further clarified genotype clustering based on trait synergistic effects. These findings support the use of multidimensional phenotyping to identify ideotypes with high yield potential, physiological efficiency and nutritional value. The study provides a foundational basis for quinoa improvement programs targeting climate adaptability and quality enhancement. Full article
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22 pages, 5405 KiB  
Article
Effects of Foliar and Root Application of Different Amino Acids on Mini-Watermelon
by Huiyu Wang, Hongxu Wang, Jing Zong, Jinghong Hao, Jin Xu, Mingshan Qu, Ting Li and Yingyan Han
Horticulturae 2025, 11(8), 877; https://doi.org/10.3390/horticulturae11080877 - 28 Jul 2025
Abstract
Biostimulants, particularly single amino acids, can increase plant growth and crop quality, gaining significant attention. This study investigates the effects of 10 amino acids via root/foliar application on the growth, quality, taste, and volatile flavor of mini-watermelons and compares the differences between the [...] Read more.
Biostimulants, particularly single amino acids, can increase plant growth and crop quality, gaining significant attention. This study investigates the effects of 10 amino acids via root/foliar application on the growth, quality, taste, and volatile flavor of mini-watermelons and compares the differences between the application methods. Here, we employed electronic noses, electronic tongues, and gas chromatography–ion mobility spectrometry to investigate these effects. Root application excels in fruit growth and pectin accumulation, while foliar application boosts soluble protein and specific nutrients. Specifically, root application (except for Val) significantly increases fruit weight, with Gly being most effective for longitudinal diameter, while most amino acids (except Val/Lys) promote transverse diameter. Pectin content shows bidirectional regulation: root application of Glu/Gly/Lys/Pro/Trp/Val enhances pectin, whereas foliar application inhibits it. For taste indices, most treatments improve soluble solids (except Glu root/Arg-Leu foliar), and Ala/Asp/Glu/Gly reduce titratable acids, optimizing the sugar–acid ratio. Foliar application is more efficient for soluble protein accumulation (Ala/Glu/Gly/Pro/Leu). For nutritional quality, except for Lys, all treatments increase vitamin C and widely promote total phenolics and lycopene, with only minor exceptions, and only Arg foliar application enhances ORAC. Additionally, the results revealed that root-applied lysine and valine greatly raised the levels of hexanal and 2-nonenal, whereas foliar-applied valine significantly increased n-nonanal and (Z)-6-nonenal. Overall, we found that amino acids can considerably improve mini-watermelon production, quality, taste, and antioxidant capacity, providing theoretical and practical references for their widespread use in agriculture. Full article
(This article belongs to the Special Issue Effects of Biostimulants on Horticultural Crop Production)
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17 pages, 3136 KiB  
Article
Comparative Transcriptome and Volatile Metabolome Analysis of Gossypium hirsutum Resistance to Verticillium Wilt
by Ni Yang, Chaoli Xu, Yajun Liang, Juyun Zheng, Shiwei Geng, Fenglei Sun, Shengmei Li, Chengxia Lai, Mayila Yusuyin, Zhaolong Gong and Junduo Wang
Genes 2025, 16(8), 877; https://doi.org/10.3390/genes16080877 - 25 Jul 2025
Viewed by 108
Abstract
Background: In recent years, changes in climate conditions and long-term continuous cropping have led to the increased occurrence of Verticillium wilt in various cotton-growing regions, causing significant economic losses in cotton production. Research has shown that volatile substances are closely linked to plant [...] Read more.
Background: In recent years, changes in climate conditions and long-term continuous cropping have led to the increased occurrence of Verticillium wilt in various cotton-growing regions, causing significant economic losses in cotton production. Research has shown that volatile substances are closely linked to plant disease resistance; however, studies on their roles in the response of cotton to Verticillium wilt, including their relationship with gene regulation, are limited. Methods: In this study, the transcriptomes and metabolomes of Xinluzao 57 (a highly susceptible Verticillium wilt variety) and 192,868 (a highly resistant Verticillium wilt variety) were sequenced at different time points after inoculation with Verticillium wilt. Results: A total of 21,911 commonly differentially expressed genes (DEGs) were identified within and between the materials, and they were clustered into eight groups. Significant annotations were made in pathways related to amino acids and anthocyanins. Metabolomics identified and annotated 26,200 volatile metabolites across nine categories. A total of 158 differentially accumulated metabolites (DAMs) were found within and between the materials; three clusters were identified, and the 10 metabolites with the most significant fold changes were highlighted. Weighted gene coexpression network analysis (WGCNA) revealed that 13 genes were significantly correlated with guanosine, 6 genes were correlated with 2-deoxyerythritol, and 32 genes were correlated with raffinose. Conclusions: Our results provide a foundation for understanding the role of volatile substances in the response of cotton to Verticillium wilt and offer new gene resources for future research on Verticillium wilt resistance. Full article
(This article belongs to the Special Issue Genetic Research on Crop Stress Resistance and Quality Traits)
24 pages, 9486 KiB  
Article
StMAPKK1 Enhances Thermotolerance in Potato (Solanum tuberosum L.) by Enhancing Antioxidant Defense and Photosynthetic Efficiency Under Heat Stress
by Xi Zhu, Yasir Majeed, Kaitong Wang, Xiaoqin Duan, Nengkang Guan, Junfu Luo, Haifei Zheng, Huafen Zou, Hui Jin, Zhuo Chen and Yu Zhang
Plants 2025, 14(15), 2289; https://doi.org/10.3390/plants14152289 - 24 Jul 2025
Viewed by 184
Abstract
The functional role of MAPKK genes in potato (Solanum tuberosum L.) under high-temperature stress remains unexplored, despite their critical importance in stress signaling and yield protection. We characterized StMAPKK1, a novel group D MAPKK localized to plasma membrane/cytoplasm. Quantitative real-time polymerase chain [...] Read more.
The functional role of MAPKK genes in potato (Solanum tuberosum L.) under high-temperature stress remains unexplored, despite their critical importance in stress signaling and yield protection. We characterized StMAPKK1, a novel group D MAPKK localized to plasma membrane/cytoplasm. Quantitative real-time polymerase chain reaction (qRT-PCR) revealed cultivar-specific upregulation in potato (‘Atlantic’ and ‘Desiree’) leaves under heat stress (25 °C, 30 °C, and 35 °C). Transgenic lines overexpressing (OE) StMAPKK1 exhibited elevated antioxidant enzyme activity, including ascorbate peroxidase (APX), catalase (CAT), superoxide dismutase (SOD), and peroxidase (POD), mitigating oxidative damage. Increased proline and chlorophyll accumulation and reduced oxidative stress markers, hydrogen peroxide (H2O2) and malondialdehyde (MDA), indicate improved cellular redox homeostasis. The upregulation of key antioxidant and heat stress-responsive genes (StAPX, StCAT1/2, StPOD12/47, StFeSOD2/3, StMnSOD, StCuZnSOD1/2, StHSFA3 and StHSP20/70/90) strengthened the enzymatic defense system, enhanced thermotolerance, and improved photosynthetic efficiency, with significant improvements in net photosynthetic rate (Pn), transpiration rate (E), and stomatal conductance (Gs) under heat stress (35 °C) in StMAPKK1-OE plants. Superior growth and biomass (plant height, plant and its root fresh and dry weights, and tuber yield) accumulation, confirming the positive role of StMAPKK1 in thermotolerance. Conversely, RNA interference (RNAi)-mediated suppression of StMAPKK1 led to a reduction in enzymatic activity, proline content, and chlorophyll levels, exacerbating oxidative stress. Downregulation of antioxidant-related genes impaired ROS scavenging capacity and declines in photosynthetic efficiency, growth, and biomass, accompanied by elevated H2O2 and MDA accumulation, highlighting the essential role of StMAPKK1 in heat stress adaptation. These findings highlight StMAPKK1’s potential as a key genetic target for breeding heat-tolerant potato varieties, offering a foundation for improving crop resilience in warming climates. Full article
(This article belongs to the Special Issue Cell Physiology and Stress Adaptation of Crops)
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17 pages, 3185 KiB  
Article
Lettuce Performance in a Tri-Trophic System Incorporating Crops, Fish and Insects Confirms the Feasibility of Circularity in Agricultural Production
by Michalis Chatzinikolaou, Anastasia Mourantian, Maria Feka and Efi Levizou
Agronomy 2025, 15(8), 1782; https://doi.org/10.3390/agronomy15081782 - 24 Jul 2025
Viewed by 230
Abstract
A circular tri-trophic system integrating aquaponics, i.e., combined cultivation of crops and fish, with insect rearing is presented for lettuce cultivation. The nutrition cycle among crops, insects and fish turns waste into resource, thereby increasing the sustainability of this food production system. A [...] Read more.
A circular tri-trophic system integrating aquaponics, i.e., combined cultivation of crops and fish, with insect rearing is presented for lettuce cultivation. The nutrition cycle among crops, insects and fish turns waste into resource, thereby increasing the sustainability of this food production system. A comprehensive evaluation of the system’s efficiency was performed, including the growth, functional and resource use efficiency traits of lettuce, the dynamics of which were followed in a pilot-scale aquaponics greenhouse, under three treatments: conventional hydroponics (HP) as the control, coupled aquaponics (CAP) with crops irrigated with fish-derived water, and decoupled aquaponics (DCAP), where fish-derived water was amended with fertilizers to reach the HP target. The main findings indicate comparable physiological performance between DCAP and HP, despite the slightly lower yield observed in the former. The CAP treatment exhibited a significant decrease in biomass accumulation and functional impairments, which were attributed to reduced nutrient levels in lettuce leaves. The DCAP treatment exhibited a 180% increase in fertilizer use efficiency compared to the HP treatment. We conclude that the tri-trophic cropping system with the implementation of DCAP variant is an effective system that enables the combined production of crops and fish, the latter being fed with sustainably derived insect protein. The tri-trophic system improves the environmental impact and sustainability of lettuce production, while making circularity feasible. Full article
(This article belongs to the Section Farming Sustainability)
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17 pages, 6842 KiB  
Article
Identification of the Embryogenesis Gene BBM in Alfalfa (Medicago sativa) and Analysis of Its Expression Pattern
by Yuzhu Li, Jiangdi Yu, Jiamin Miao, Weinan Yue and Tongyu Xu
Agronomy 2025, 15(8), 1768; https://doi.org/10.3390/agronomy15081768 - 23 Jul 2025
Viewed by 144
Abstract
Apomixis-mediated fixation of heterosis could transform hybrid breeding in alfalfa (Medicago sativa), a globally important forage crop. The parthenogenesis-inducing morphogenetic regulator BABY BOOM (BBM) represents a promising candidate for enabling this advancement. Here, we identified BBM homologs from three alfalfa genomes, [...] Read more.
Apomixis-mediated fixation of heterosis could transform hybrid breeding in alfalfa (Medicago sativa), a globally important forage crop. The parthenogenesis-inducing morphogenetic regulator BABY BOOM (BBM) represents a promising candidate for enabling this advancement. Here, we identified BBM homologs from three alfalfa genomes, characterized their promoter regions, and cloned a 2082 bp MsBBM gene encoding a 694-amino acid nuclear-localized protein. Three alfalfa BBM gene promoters primarily contained light- and hormone-responsive elements. Phylogenetic and conserved domain analyses of the MsBBM protein revealed a high sequence similarity with M. truncatula BBM. Expression profiling demonstrated tissue-specific accumulation of MsBBM transcripts, with the highest expression in the roots and developing pods. Hormonal treatments differentially regulated MsBBM. Expression was upregulated by GA3 (except at 4 h) and SA, downregulated by NAA, MeJA (both except at 8 h), and ABA (except at 4 h), while ETH treatment induced a transient expression peak at 2 h. As an AP2/ERF family transcription factor showing preferential expression in young embryos, MsBBM likely participates in reproductive development and may facilitate apomixis. These findings establish a molecular framework for exploiting MsBBM to enhance alfalfa breeding efficiency through heterosis fixation. Full article
(This article belongs to the Section Grassland and Pasture Science)
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35 pages, 1745 KiB  
Article
Balanced Fertilization of Winter Wheat with Potassium and Magnesium—An Effective Way to Manage Fertilizer Nitrogen Sustainably
by Agnieszka Andrzejewska, Katarzyna Przygocka-Cyna and Witold Grzebisz
Sustainability 2025, 17(15), 6705; https://doi.org/10.3390/su17156705 - 23 Jul 2025
Viewed by 319
Abstract
In agricultural practice, in addition to determining the nitrogen (Nf) dose, it is necessary to effectively control its effect on currently grown crops. Meeting these conditions requires not only the use of phosphorus (P) and potassium (K), but also nutrients such [...] Read more.
In agricultural practice, in addition to determining the nitrogen (Nf) dose, it is necessary to effectively control its effect on currently grown crops. Meeting these conditions requires not only the use of phosphorus (P) and potassium (K), but also nutrients such as magnesium (Mg) and sulfur (S). This hypothesis was verified in a single-factor field experiment with winter wheat (WW) carried out in the 2015/2016, 2016/2017, and 2017/2018 growing seasons. The experiment consisted of seven variants: absolute control (AC), NP, NPK-MOP (K as Muriate of Potash), NPK-MOP+Ki (Kieserite), NPK-KK (K as Korn–Kali), NPK-KK+Ki, and NPK-KK+Ki+ES (Epsom Salt). The use of K as MOP increased grain yield (GY) by 6.3% compared to NP. In the NPK-KK variant, GY was 13% (+0.84 t ha−1) higher compared to NP. Moreover, GYs in this fertilization variant (FV) were stable over the years (coefficient of variation, CV = 9.4%). In NPK-KK+Ki+ES, the yield increase was the highest and mounted to 17.2% compared to NP, but the variability over the years was also the highest (CV ≈ 20%). The amount of N in grain N (GN) increased progressively from 4% for NPK-MOP to 15% for NPK-KK and 25% for NPK-KK+Ki+ES in comparison to NP. The nitrogen harvest index was highly stable, achieving 72.6 ± 3.1%. All analyzed NUE indices showed a significant response to FVs. The PFP-Nf (partial factor productivity of Nf) indices increased on NPK-MOP by 5.8%, NPK-KK by 12.9%, and NPK-KK+Ki+ES by 17.9% compared to NP. The corresponding Nf recovery of Nf in wheat grain was 47.2%, 55.9%, and 64.4%, but its total recovery by wheat (grain + straw) was 67%, 74.5%, and 87.2%, respectively. In terms of the theoretical and practical value of the tested indexes, two indices, namely, NUP (nitrogen unit productivity) and NUA (nitrogen unit accumulation), proved to be the most useful. From the farmer’s production strategy, FV with K applied in the form of Korn–Kali proved to be the most stable option due to high and stable yield, regardless of weather conditions. The increase in the number of nutritional factors optimizing the action of nitrogen in winter wheat caused the phenomenon known as the “scissors effect”. This phenomenon manifested itself in a progressive increase in nitrogen unit productivity (NUP) combined with a regressive trend in unit nitrogen accumulation (NUA) in the grain versus the balance of soil available Mg (Mgb). The studies clearly showed that obtaining grain that met the milling requirements was recorded only for NUA above 22 kg N t−1 grain. This was possible only with the most intensive Mg treatment (NPK-KK+Ki and NPK-KK+Ki+ES). The study clearly showed that three of the six FVs fully met the three basic conditions for sustainable crop production: (i) stabilization and even an increase in grain yield; (ii) a decrease in the mass of inorganic N in the soil at harvest, potentially susceptible to leaching; and (iii) stabilization of the soil fertility of P, K, and Mg. Full article
(This article belongs to the Special Issue Soil Fertility and Plant Nutrition for Sustainable Cropping Systems)
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22 pages, 3879 KiB  
Article
Optimal Dark Tea Fertilization Enhances the Growth and Flower Quality of Tea Chrysanthemum by Improving the Soil Nutrient Availability in Simultaneous Precipitation and High-Temperature Regions
by Jiayi Hou, Jiayuan Yin, Lei Liu and Lu Xu
Agronomy 2025, 15(7), 1753; https://doi.org/10.3390/agronomy15071753 - 21 Jul 2025
Viewed by 249
Abstract
The simplex strategies of fertilizer management and problems caused by simultaneous precipitation and high-temperature (SPH) climate were the main factors that led to yield loss and quality decline in the continuous cropping of tea chrysanthemum (Dendranthema morifolium ‘Jinsi Huang’). In this study, [...] Read more.
The simplex strategies of fertilizer management and problems caused by simultaneous precipitation and high-temperature (SPH) climate were the main factors that led to yield loss and quality decline in the continuous cropping of tea chrysanthemum (Dendranthema morifolium ‘Jinsi Huang’). In this study, with sustainable biofertilizers being proposed as a potential solution. However, their effects under such constraints are underexplored. In this study, we compared different proportions of a sustainable dark tea biofertilizer, made with two commonly used fertilizers, by their contributions to the morphological, photosynthetic, and flowering traits of D. morifolium ‘Jinsi Huang’. The results showed that increasing the dark tea biofertilizer application to 4.5 kg·m−2 significantly enhanced the soil alkali hydrolyzed nitrogen (596.53% increase), available phosphorus (64.11%), and rapidly available potassium (75.56%) compared to the levels in yellow soil. This nutrient enrichment in soil caused D. morifolium ‘Jinsi Huang’ to produce more leaves (272.84% increase) and flower buds (1041.67%), along with a strengthened photosynthetic capacity (higher Fv/Fm values and light saturation point). These improvements alleviated the photoinhibition caused by SPH climate conditions, ultimately leading to significantly higher contents of chlorogenic acid (38.23% increase) and total flavonoids (80.28%) in the harvested flowers compared to the control group. Thus, dark tea biofertilizer is a cost-effective and efficient additive for growing tea chrysanthemum in SPH regions due to improving soil quality and causing nutritional and functional components to accumulate in harvest flowers, which greatly promotes the commercial value of rural revitalization industries centered around tea chrysanthemum. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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28 pages, 2503 KiB  
Article
The Identification of Transcriptomic and Phytohormonal Biomarkers for Monitoring Drought and Evaluating the Potential of Acibenzolar-S-Methyl Root Application to Prime Two Apple Rootstock Genotypes for Drought Resistance
by Kirstin V. Wurms, Tony Reglinski, Erik H. A. Rikkerink, Nick Gould, Catrin S. Günther, Janine M. Cooney, Poppy Buissink, Annette Ah Chee, Christina B. Fehlmann, Dwayne J. A. Jensen and Duncan Hedderley
Int. J. Mol. Sci. 2025, 26(14), 6986; https://doi.org/10.3390/ijms26146986 - 21 Jul 2025
Viewed by 254
Abstract
Droughts are predicted to intensify with climate change, posing a serious threat to global crop production. Increasing drought tolerance in plants requires an understanding of the underlying mechanisms. This study measured the physiological, phytohormonal and transcriptomic responses to drought in two apple rootstocks [...] Read more.
Droughts are predicted to intensify with climate change, posing a serious threat to global crop production. Increasing drought tolerance in plants requires an understanding of the underlying mechanisms. This study measured the physiological, phytohormonal and transcriptomic responses to drought in two apple rootstocks to identify drought ‘biomarkers’ and investigated whether the application of acibenzolar-S-methyl (ASM) to the roots could enhance drought tolerance. Two potted-plant trials were conducted on dwarfing (M9) and semi-dwarfing (CG202) apple rootstocks. In both trials, the response patterns in the roots and leaves were compared between irrigated and non-irrigated plants over a 14-day period. In trial 2, ASM was applied 14 days before and immediately before withdrawing irrigation. Drought induced significant decreases in transpiration, photosynthesis and stomatal conductance in both trials. This was accompanied by the accumulation of abscisic acid (ABA) metabolites and the upregulation of ABA pathway transcripts (CYP707A1/A2 and NCED3), a decrease in 12-oxophytodienoic acid (cis-OPDA) and the downregulation of ABA receptor genes (PYL4). The responses to drought were greater in the roots than the leaves, broadly similar across both rootstocks, but differed in strength and timing between the rootstocks. The application of ASM to the roots did not significantly affect the responsiveness to drought in either rootstock. The identified phytohormonal and transcriptomic biomarkers require further validation across a broader range of genotypes. Full article
(This article belongs to the Special Issue Phytohormones: From Physiological Response to Application)
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14 pages, 9617 KiB  
Article
Disruption of FW2.2-like Genes Enhances Metallic Micronutrient Accumulation in Brown Rice
by Qingsong Gao, Rumeng Sun, Jiayi Ding, Xingdang Xu, Xun Ma, Xi Liu and Hao Zhang
Agronomy 2025, 15(7), 1747; https://doi.org/10.3390/agronomy15071747 - 20 Jul 2025
Viewed by 236
Abstract
Micronutrient deficiencies adversely affect human health and pose a significant global threat. Enhancing the accumulation of micronutrients in the edible parts of crops through genetic breeding is a promising strategy to mitigate micronutrient deficiencies in humans. FW2.2-like (FWL) genes play [...] Read more.
Micronutrient deficiencies adversely affect human health and pose a significant global threat. Enhancing the accumulation of micronutrients in the edible parts of crops through genetic breeding is a promising strategy to mitigate micronutrient deficiencies in humans. FW2.2-like (FWL) genes play crucial roles in regulating heavy metal homeostasis in plants. We previously obtained two allelic mutants for each of the rice OsFWL1 (osfwl1a and osfwl1b) and OsFWL2 (osfwl2a and osfwl2b) genes. In this study, we showed that disruption of either OsFWL1 or OsFWL2 significantly enhanced the accumulation of metallic micronutrients in brown rice. Compared with that in the wild type, the iron (Fe) concentration in brown rice was higher in the osfwl1a (+166.7%), osfwl1b (+24.3%), and osfwl2a (+99.2%) mutants; the manganese (Mn) concentration was elevated in all four mutants (+25.1% to 35.6%); the copper (Cu) concentration increased in osfwl2a (+31.0%) and osfwl2b (+29.0%); and the zinc (Zn) concentration increased in osfwl2a (+10.2%). Additionally, disruption of OsFWL1 or OsFWL2 affected the homeostasis of metallic micronutrients in seedlings. Transcriptome analysis suggested that OsFWL1 and OsFWL2 might regulate cell wall polysaccharide metabolism and the expression of heavy metal transporter genes. Protein interaction analysis revealed that OsFWL1 interacted with OsFWL2 on the cell membrane. These findings suggest that OsFWL1 and OsFWL2 can serve as genetic biofortification tools to increase the concentrations of metallic micronutrients in rice grains. Full article
(This article belongs to the Special Issue Innovative Research on Rice Breeding and Genetics)
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23 pages, 4385 KiB  
Article
Melatonin Enhances Tomato Salt Tolerance by Improving Water Use Efficiency, Photosynthesis, and Redox Homeostasis
by Chen Ru, Yuxuan Liu, Xingjiao Yu, Chuanliu Xie and Xiaotao Hu
Agronomy 2025, 15(7), 1746; https://doi.org/10.3390/agronomy15071746 - 20 Jul 2025
Viewed by 203
Abstract
Salinity stress is a primary abiotic constraint limiting global crop productivity, with progressive soil salinization inducing growth inhibition and physiological dysfunction in plants. Although melatonin (MT) has been extensively documented to enhance stress adaptation, the underlying mechanisms through which it mediates salt tolerance [...] Read more.
Salinity stress is a primary abiotic constraint limiting global crop productivity, with progressive soil salinization inducing growth inhibition and physiological dysfunction in plants. Although melatonin (MT) has been extensively documented to enhance stress adaptation, the underlying mechanisms through which it mediates salt tolerance by integrating physiological processes remain unclear. This study investigated the effects of varying MT concentrations on photosynthetic performance, plant water relations, water-use efficiency, and stress-responsive physiological parameters in tomatoes, aiming to identify the key physiological pathways for MT-mediated salt stress mitigation. The results showed that salt stress significantly reduced the leaf relative water content and root hydraulic conductivity, suppressed the photosynthetic rate, and ultimately caused significant reductions in the aboveground and root biomass. MT spraying effectively improved leaf water status and root water uptake capacity, enhancing the photosynthetic rate and water-use efficiency, thereby providing material and energy support for plant growth. Furthermore, MT spraying increased the total antioxidant capacity in leaves and promoted the synthesis of phenolic and flavonoid compounds, thereby reducing oxidative damage. Simultaneously, it stimulated the accumulation of osmolytes to enhance cellular osmotic adjustment capacity and optimized ion uptake to maintain cellular ion homeostasis. Among the tested concentrations, 100 μM MT showed the most significant alleviative effects. This concentration comprehensively enhanced the salt tolerance and growth performance of tomato plants by synergistically optimizing water use, photosynthetic function, antioxidant defense, and ion balance. In conclusion, these findings provide experimental evidence for elucidating the physiological mechanisms underlying MT-mediated salt tolerance in tomatoes and offer theoretical references for the rational application of MT in crop production under saline conditions. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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20 pages, 3953 KiB  
Article
Straw Returning Combined with Application of Sulfur-Coated Urea Improved Rice Yield and Nitrogen Use Efficiency Through Enhancing Carbon and Nitrogen Metabolism
by Guangxin Zhao, Kaiyu Gao, Ming Gao, Xiaotian Xu, Zeming Li, Xianzhi Yang, Ping Tian, Xiaoshuang Wei, Zhihai Wu and Meiying Yang
Agriculture 2025, 15(14), 1554; https://doi.org/10.3390/agriculture15141554 - 19 Jul 2025
Viewed by 278
Abstract
Straw returning inhibits tillering at the early stage of rice growth and thus affects grain yield. Sulfur-coated urea (SCU) has been expected to increase nitrogen use efficiency (NUE) and yield, save labor input, and reduce environmental pollution in crop production. Nevertheless, the sulfur [...] Read more.
Straw returning inhibits tillering at the early stage of rice growth and thus affects grain yield. Sulfur-coated urea (SCU) has been expected to increase nitrogen use efficiency (NUE) and yield, save labor input, and reduce environmental pollution in crop production. Nevertheless, the sulfur coatings of SCU are easy to break and then shorten the nutrient release cycle. Whether there was a complementary effect between straw returning and SCU in NUE and grain yield had remained elusive. To investigate the effects of straw returning combined with the application of SCU on NUE and rice yield, a two-year field experiment was conducted from 2022 to 2023 with three treatments (straw returning combined with conventional urea (SRU), no straw returning combined with SCU (NRS), straw returning combined with SCU (SRS)). We found that straw returning combined with the application of SCU increased rice yield and NUE significantly. Compared with SRU and NRS, SRS treatments significantly increased grain yield by 14.61–16.22%, and 4.14–7.35%, respectively. Higher effective panicle numbers per m2 and grain numbers per panicle were recorded in NRS and SRS treatments than SRU. SRS treatment increased nitrogen recovery efficiency by 79.53% and 22.97%, nitrogen agronomic efficiency by 18.68% and 17.37%, and nitrogen partial factor productivity by 10.51% and 9.81% compared with SRU and NRS treatment, respectively. The enhanced NUE in SRS was driven by higher leaf area index, SPAD value, net photosynthetic rate, carbon metabolic enzyme (RuBP and SPS) activity, nitrogen metabolic enzyme (NR, GS, and GOGAT) activity, sucrose and nitrogen content in leaves, and nitrogen accumulation in plant during grain filling. Moreover, the improved yield in SRS was closely related to superior NUE. In conclusion, straw returning combined with application of SCU boosted grain yield and NUE via enhanced carbon–nitrogen metabolism during the late growth period in rice. Full article
(This article belongs to the Special Issue Effects of Crop Management on Yields)
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19 pages, 1578 KiB  
Article
Decreased Nitrogen and Carbohydrate Metabolism Activity Leads to Grain Yield Reduction in Qingke Under Continuous Cropping
by Zhiqi Ma, Chaochao He, Jianxin Tan, Tao Jin and Shuijin Hua
Plants 2025, 14(14), 2235; https://doi.org/10.3390/plants14142235 - 19 Jul 2025
Viewed by 201
Abstract
Qingke (Hordeum vulgare L. var. nudum Hook. f.), a staple crop in the Tibetan Plateau, suffers from severe yield reduction under continuous cropping (by 38.67%), yet the underlying mechanisms remain unclear. This study systematically investigated the effects of 23-year continuous cropping (23y-CC) [...] Read more.
Qingke (Hordeum vulgare L. var. nudum Hook. f.), a staple crop in the Tibetan Plateau, suffers from severe yield reduction under continuous cropping (by 38.67%), yet the underlying mechanisms remain unclear. This study systematically investigated the effects of 23-year continuous cropping (23y-CC) on the nutrient dynamics, carbohydrate metabolism, and enzymatic activities in Qingke leaves across five developmental stages (T1: seedling; T2: tillering; T3: jointing; T4: flowering; T5: filling). Compared to the control (first-year planting), 23y-CC significantly reduced leaf nitrogen (N), phosphorus (P), and potassium (K) contents by 60.94%, 47.96%, and 60.82%, respectively, at early growth stages. Key nitrogen-metabolizing enzymes, including glutamate synthase (GOGAT), glutamine synthase (GS), and nitrate reductase (NR), exhibited reduced activities under 23y-CC, indicating impaired nitrogen assimilation. Carbohydrate profiling revealed lower starch and glucose contents but higher sucrose accumulation in later stages (T4–T5) under 23y-CC, accompanied by the dysregulation of sucrose synthase (SS) and invertase activities. These findings elucidate how continuous cropping disrupts nutrient homeostasis and carbon allocation, ultimately compromising Qingke productivity. This study provides novel insights into agronomic strategies for mitigating continuous cropping obstacles in Qingke. Full article
(This article belongs to the Special Issue Influence of Management Practices on Plant Growth)
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19 pages, 2271 KiB  
Article
Possible Use in Soil Bioremediation of the Bacterial Strain Bacillus Sphaericus NM-1 Capable of Simultaneously Degrading Promethrin and Acetochlor
by Yue Cheng, Qian Fu, Junjia Xu, Xinhua Niu, Lin Liu, Jiaqi Wang, Jingwen Quan, Qingyue Yu, Baoyan Chi, Haitao Li and Rongmei Liu
Microorganisms 2025, 13(7), 1698; https://doi.org/10.3390/microorganisms13071698 - 19 Jul 2025
Viewed by 260
Abstract
Prometryn and acetochlor are herbicides used to control weeds in farmlands and other areas. They enter the soil through direct application, residual accumulation in crops, and atmospheric deposition. The pollution of their residues in the environment has attracted people’s attention. Bioremediation is one [...] Read more.
Prometryn and acetochlor are herbicides used to control weeds in farmlands and other areas. They enter the soil through direct application, residual accumulation in crops, and atmospheric deposition. The pollution of their residues in the environment has attracted people’s attention. Bioremediation is one of the main methods to solve such problems. In this study, the effects of prometryn and acetochlor-degrading strain NM-1 on soil enzymes, soil microbial communities, and physiological indexes of soybean seedlings during soil remediation were studied, and the relationship between them was discussed. The results showed that 81.54% of prometryn (50 mg·L−1) and 89.47% of acetochlor (50 mg·L−1) were degraded within 15 days after NM-1 inoculation in soil. NM-1 positively affected soil enzyme activities and soil microbial communities, and the abundance of beneficial bacteria in soil increased. More importantly, the inoculation of strain NM-1 under prometryn and acetochlor stress significantly increased plant height, root length, root volume, water content, chlorophyll concentration, and root activity of soybean. The results of these studies showed that the NM-1 strain showed significant potential in bioremediation in order to provide technical support for solving the problem of prometryn and acetochlor pollution. Full article
(This article belongs to the Section Environmental Microbiology)
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34 pages, 16612 KiB  
Article
Identification of Optimal Areas for the Cultivation of Genetically Modified Cotton in Mexico: Compatibility with the Center of Origin and Centers of Genetic Diversity
by Antonia Macedo-Cruz
Agriculture 2025, 15(14), 1550; https://doi.org/10.3390/agriculture15141550 - 19 Jul 2025
Viewed by 307
Abstract
The agricultural sector faces significant sustainability, productivity, and environmental impact challenges. In this context, geographic information systems (GISs) have become a key tool to optimize resource management and make informed decisions based on spatial data. These data support planning the best cotton planting [...] Read more.
The agricultural sector faces significant sustainability, productivity, and environmental impact challenges. In this context, geographic information systems (GISs) have become a key tool to optimize resource management and make informed decisions based on spatial data. These data support planning the best cotton planting and harvest dates based on agroclimatic conditions, such as temperature, precipitation, and soil type, as well as identifying areas with a lower risk of water or thermal stress. As a result, cotton productivity is optimized, and costs associated with supplementary irrigation or losses due to adverse conditions are reduced. However, data from automatic weather stations in Mexico are scarce and incomplete. Instead, grid meteorological databases (DMM, in Spanish) were used with daily temperature and precipitation data from 1983 to 2020 to determine the heat units (HUs) for each cotton crop development stage; daily and accumulated HU; minimum, mean, and maximum temperatures; and mean annual precipitation. This information was used to determine areas that comply with environmental, geographic, and regulatory conditions (NOM-059-SEMARNAT-2010, NOM-026-SAG/FITO-2014) to delimit areas with agricultural potential for planting genetically modified (GM) cotton. The methodology made it possible to produce thirty-four maps at a 1:250,000 scale and a digital GIS with 95% accuracy. These maps indicate whether a given agricultural parcel is optimal for cultivating GM cotton. Full article
(This article belongs to the Section Artificial Intelligence and Digital Agriculture)
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