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13 pages, 2441 KiB  
Article
Enzymatic Stoichiometry and Driving Factors Under Different Land-Use Types in the Qinghai–Tibet Plateau Region
by Yonggang Zhu, Feng Xiong, Derong Wu, Baoguo Zhao, Wenwu Wang, Biao Bi, Yihang Liu, Meng Liang and Sha Xue
Land 2025, 14(8), 1550; https://doi.org/10.3390/land14081550 - 28 Jul 2025
Abstract
Eco-enzymatic stoichiometry provides a basis for understanding soil ecosystem functions, with implications for land management and ecological protection. Long-term climatic factors and human interferences have caused significant land-use transformations in the Qinghai–Tibet Plateau region, affecting various ecological functions, such as soil nutrient cycling [...] Read more.
Eco-enzymatic stoichiometry provides a basis for understanding soil ecosystem functions, with implications for land management and ecological protection. Long-term climatic factors and human interferences have caused significant land-use transformations in the Qinghai–Tibet Plateau region, affecting various ecological functions, such as soil nutrient cycling and chemical element balance. It is currently unclear how large-scale land-use conversion affects soil ecological stoichiometry. In this study, 763 soil samples were collected across three land-use types: farmland, grassland, and forest land. In addition, changes in soil physicochemical properties and enzyme activity and stoichiometry were determined. The soil available phosphorus (SAP) and total phosphorus (TP) concentrations were the highest in farmland soil. Bulk density, pH, SAP, TP, and NO3-N were lower in forest soil, whereas NH4+-N, available nitrogen, soil organic carbon (SOC), available potassium, and the soil nutrient ratio increased. Land-use conversion promoted soil β-1,4-glucosidase, N-acetyl-β-glucosaminidase, and alkaline phosphatase activities, mostly in forest soil. The eco-enzymatic C:N ratio was higher in farmland soils but grassland soils had a higher enzymatic C:P and N:P. Soil microorganisms were limited by P nutrients in all land-use patterns. C limitation was the highest in farmland soil. The redundancy analysis indicated that the ecological stoichiometry in farmland was influenced by TN, whereas grass and forest soils were influenced by SOC. Overall, the conversion of cropland or grassland to complex land-use types can effectively enhance soil nutrients, enzyme activities, and ecosystem functions, providing valuable insights for ecological restoration and sustainable land management in alpine regions. Full article
(This article belongs to the Section Land Use, Impact Assessment and Sustainability)
16 pages, 7614 KiB  
Article
Untangling the Toxicity Dilemma of the Orbetello Lagoon Sediments in Paracentrotus lividus Bioassay: Trace Metals vs. Ammonium
by Davide Sartori, Simona Macchia, Giorgio Tranchida, Paolo Altemura, Vincenzo Tancredi, Alice Scuderi, Maria Elena Piccione, Stefano Ferrari and Andrea Gaion
Nitrogen 2025, 6(3), 62; https://doi.org/10.3390/nitrogen6030062 - 28 Jul 2025
Abstract
This study assesses sediment toxicity in the historically contaminated Orbetello Lagoon (southern Tuscany) using Paracentrotus lividus embryo development bioassays. Elutriates from 15 sites were analysed for trace metals, organic matter, and ammonium. Despite elevated mercury concentrations, toxicity did not consistently correlate with metal [...] Read more.
This study assesses sediment toxicity in the historically contaminated Orbetello Lagoon (southern Tuscany) using Paracentrotus lividus embryo development bioassays. Elutriates from 15 sites were analysed for trace metals, organic matter, and ammonium. Despite elevated mercury concentrations, toxicity did not consistently correlate with metal levels. Instead, Principal Component Analysis (PCA) identified ammonium as a key driver of developmental toxicity, suggesting that it significantly influences both biological effects and metal bioavailability. These results demonstrate that ammonium, often overlooked, can confound sediment toxicity assessments and should be integrated into risk evaluation frameworks for coastal systems affected by legacy pollution. Full article
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15 pages, 1609 KiB  
Article
Swap Test-Based Quantum Protocol for Private Array Equality Comparison
by Min Hou and Shibin Zhang
Mathematics 2025, 13(15), 2425; https://doi.org/10.3390/math13152425 - 28 Jul 2025
Abstract
Private array equality comparison (PAEC) aims to evaluate whether two arrays are equal while maintaining the confidentiality of their elements. Current private comparison protocols predominantly focus on determining the relationships of secret integers, lacking exploration of array comparisons. To address this issue, we [...] Read more.
Private array equality comparison (PAEC) aims to evaluate whether two arrays are equal while maintaining the confidentiality of their elements. Current private comparison protocols predominantly focus on determining the relationships of secret integers, lacking exploration of array comparisons. To address this issue, we propose a swap test-based quantum protocol for PAEC, which satisfies both functionality and security requirements using the principles of quantum mechanics. This protocol introduces a semi-honest third party (TP) that acts as a medium for generating Bell states as quantum resources and distributes the first and second qubits of these Bell states to the respective participants. They encode their array elements into the received qubits by performing rotation operations. These encoded qubits are sent to TP to derive the comparison results. To verify the feasibility of the proposed protocol, we construct a quantum circuit and conduct simulations on the IBM quantum platform. Security analysis further indicates that our protocol is resistant to various quantum attacks from outsider eavesdroppers and attempts by curious participants. Full article
(This article belongs to the Special Issue Recent Advances in Quantum Theory and Its Applications)
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13 pages, 1563 KiB  
Article
Activation of Peracetic Acid by Ozone for Recalcitrant Pollutant Degradation: Accelerated Kinetics, Byproduct Mitigation, and Microbial Inactivation
by Dihao Bai, Cong Liu, Siqing Zhang, Huiyu Dong, Lei Sun and Xiangjuan Yuan
Water 2025, 17(15), 2240; https://doi.org/10.3390/w17152240 - 28 Jul 2025
Abstract
Iopamidol (IPM), as a typical recalcitrant emerging pollutant and precursor of iodinated disinfection by-products (I-DBPs), is unsuccessfully removed by conventional wastewater treatment processes. This study comprehensively evaluated the ozone/peracetic acid (O3/PAA) process for IPM degradation, focusing on degradation kinetics, environmental impacts, [...] Read more.
Iopamidol (IPM), as a typical recalcitrant emerging pollutant and precursor of iodinated disinfection by-products (I-DBPs), is unsuccessfully removed by conventional wastewater treatment processes. This study comprehensively evaluated the ozone/peracetic acid (O3/PAA) process for IPM degradation, focusing on degradation kinetics, environmental impacts, transformation products, ecotoxicity, disinfection byproducts (DBPs), and microbial inactivation. The O3/PAA system synergistically activates PAA via O3 to generate hydroxyl radicals (OH) and organic radicals (CH3COO and CH3CO(O)O), achieving an IPM degradation rate constant of 0.10 min−1, which was significantly higher than individual O3 or PAA treatments. The degradation efficiency of IPM in the O3/PAA system exhibited a positive correlation with solution pH, achieving a maximum degradation rate constant of 0.23 min−1 under alkaline conditions (pH 9.0). Furthermore, the process demonstrated strong resistance to interference from coexisting anions, maintaining robust IPM removal efficiency in the presence of common aqueous matrix constituents. Furthermore, quenching experiments revealed OH dominated IPM degradation in O3/PAA system, while the direct oxidation by O3 and R-O played secondary roles. Additionally, based on transformation products (TPs) identification and ECOSAR predictions, the primary degradation pathways were elucidated and the potential ecotoxicity of TPs was systematically assessed. DBPs analysis after chlorination revealed that the O3/PAA (2.5:3) system achieved the lowest total DBPs concentration (99.88 μg/L), representing a 71.5% reduction compared to PAA alone. Amongst, dichloroacetamide (DCAM) dominated the DBPs profile, comprising > 60% of total species. Furthermore, the O3/PAA process achieved rapid 5–6 log reductions of E. coli. and S. aureus within 3 min. These results highlight the dual advantages of O3/PAA in effective disinfection and byproduct control, supporting its application in sustainable wastewater treatment. Full article
(This article belongs to the Section Wastewater Treatment and Reuse)
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12 pages, 910 KiB  
Article
Unusual Profile of Germline Genetic Variants in Unselected Colorectal Cancer Patients from a High-Prevalence Region in Panama
by Iván Landires, José Pinto, Raúl Cumbrera, Alexandra Nieto, Gumercindo Pimentel-Peralta, Yennifer Alfaro and Virginia Núñez-Samudio
Genes 2025, 16(8), 890; https://doi.org/10.3390/genes16080890 - 28 Jul 2025
Abstract
Background: The profile of germline genetic variants among colorectal cancer patients in Panama has not yet been explored. Methods: We recruited 95 patients with colorectal cancer in an Oncology Reference Hospital Unit in the Azuero region of central Panama, which exhibited the highest [...] Read more.
Background: The profile of germline genetic variants among colorectal cancer patients in Panama has not yet been explored. Methods: We recruited 95 patients with colorectal cancer in an Oncology Reference Hospital Unit in the Azuero region of central Panama, which exhibited the highest prevalence of colorectal cancer in Panama. DNA analysis was performed with a panel of 113 genes with germline mutations for cancer (TruSight® Cancer Sequencing Panel from Illumina, San Diego, CA, USA). Results: Among the 95 cases, 10 pathogenic/likely pathogenic variants (P/LP) were identified in the MUTYH, TP53, CHEK2, PALB2, ATM, and BARD1 genes, representing 10% of the total. The variant 1103G>A (p.Gly368Asp) in MUTYH was the most prevalent. The variant at c.1675_1676delCAinsTG (p.Gln559Ter) in PALB2 is new and is reported for the first time in this study. Variants were most frequently detected in the MUTYH and CHEK2 genes, affecting four and two patients, respectively. Notably, none of the 95 Panamanian patients in the initial colorectal cancer cohort had mutations in mismatch repair (MMR) genes. These genes are among the most frequently mutated in other cohorts around the world. Conclusions: The atypical profile of germline genetic variants in this population may be related to the unique characteristics of the Azuero population in Panama’s central region. This profile may partly explain the high prevalence of colorectal cancer among its inhabitants. Full article
(This article belongs to the Section Human Genomics and Genetic Diseases)
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41 pages, 3023 KiB  
Article
Enhanced Scalability and Security in Blockchain-Based Transportation Systems for Mass Gatherings
by Ahmad Mutahhar, Tariq J. S. Khanzada and Muhammad Farrukh Shahid
Information 2025, 16(8), 641; https://doi.org/10.3390/info16080641 - 28 Jul 2025
Abstract
Large-scale events, such as festivals and public gatherings, pose serious problems in terms of traffic congestion, slow transaction processing, and security risks to transportation planning. This study proposes a blockchain-based solution for enhancing the efficiency and security of intelligent transport systems (ITS) by [...] Read more.
Large-scale events, such as festivals and public gatherings, pose serious problems in terms of traffic congestion, slow transaction processing, and security risks to transportation planning. This study proposes a blockchain-based solution for enhancing the efficiency and security of intelligent transport systems (ITS) by utilizing state channels and rollups. Throughput is optimized, enabling transaction speeds of 800 to 3500 transactions per second (TPS) and delays of 5 to 1.5 s. Prevent data tampering, strengthen security, and enhance data integrity from 89% to 99.999%, as well as encryption efficacy from 90% to 98%. Furthermore, our system reduces congestion, optimizes vehicle movement, and shares real-time, secure data with stakeholders. Practical applications include fast and safe road toll payments, faster public transit ticketing, improved emergency response coordination, and enhanced urban mobility. The decentralized blockchain helps maintain trust among users, transportation authorities, and event organizers. Our approach extends beyond large-scale events and proposes a path toward ubiquitous, Artificial Intelligence (AI)-driven decision-making in a broader urban transit network, informing future operations in dynamic traffic optimization. This study demonstrates the potential of blockchain to create more intelligent, more secure, and scalable transportation systems, which will help reduce urban mobility inefficiencies and contribute to the development of resilient smart cities. Full article
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40 pages, 1378 KiB  
Systematic Review
Liquid Biopsy Biomarkers in Metastatic Castration-Resistant Prostate Cancer Treated with Second-Generation Antiandrogens: Ready for Clinical Practice? A Systematic Review
by Andrei-Vlad Badulescu, Razvan Rahota, Alon Vigdorovits and Ovidiu Laurean Pop
Cancers 2025, 17(15), 2482; https://doi.org/10.3390/cancers17152482 - 27 Jul 2025
Abstract
Background: Second-generation androgen receptor signaling inhibitors are one of the main treatment options in metastatic castration-resistant prostate cancer (mCRPC). Nonetheless, a considerable proportion show limited response to treatment, which indicates the need for convenient, easily accessible predictor biomarkers, a role suited for [...] Read more.
Background: Second-generation androgen receptor signaling inhibitors are one of the main treatment options in metastatic castration-resistant prostate cancer (mCRPC). Nonetheless, a considerable proportion show limited response to treatment, which indicates the need for convenient, easily accessible predictor biomarkers, a role suited for liquid biopsy. Methods: We conducted a PRISMA-compliant systematic review of four databases (Embase, Medline, Scopus, Web of Science) to identify all studies (observational studies and clinical trials) investigating cell-free DNA, circulating tumor cells, exosomes, and circulating RNAs as prognostic markers in metastatic castration-resistant patients starting androgen receptor signaling inhibitors. We excluded studies that evaluated combination therapies, rare histological subtypes or included nonmetastatic or castrate-sensitive disease. We also evaluated whether published papers followed reporting guidelines (REMARK, STROBE, or CONSORT for abstracts). Results: We identified a total of 123 reports, from which we identified only a few well-studied and consistent biomarkers: androgen receptor overexpression/copy number gain and splice variant 7, as well as disease burden markers (circulating tumor DNA fraction and circulating tumor cell concentration). Alterations or copy number loss in tumor suppressors PTEN, RB1, and TP53 were second in terms of quantity and consistency of evidence. However, a large majority of identified biomarkers were relatively understudied or inconsistent. We identified two potential vulnerabilities: inconsistent adherence to reporting guidelines and the under-inclusion of patients of non-Western European ancestry. Conclusions: A large number of biomarkers were linked to worse outcomes in prostate cancer; nonetheless, in most cases, the evidence is limited or inconsistent, or even contradictory. The main exceptions pertain to androgen receptor signaling and disease burden, and, to a smaller extent, to certain tumor suppressor genes. Further studies are needed to confirm their clinical utility, using clear and consistent methodologies and including patients from currently understudied populations. Full article
(This article belongs to the Special Issue Recent Advances in Liquid Biopsy Biomarkers of Cancer)
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20 pages, 6150 KiB  
Article
Evaluation of Eutrophication in Small Reservoirs in Northern Agricultural Areas of China
by Qianyu Jing, Yang Shao, Xiyuan Bian, Minfang Sun, Zengfei Chen, Jiamin Han, Song Zhang, Shusheng Han and Haiming Qin
Diversity 2025, 17(8), 520; https://doi.org/10.3390/d17080520 - 26 Jul 2025
Viewed by 31
Abstract
Small reservoirs have important functions, such as water resource guarantee, flood control and drought resistance, biological habitat and maintaining regional economic development. In order to better clarify the impact of agricultural activities on the nutritional status of water bodies in small reservoirs, zooplankton [...] Read more.
Small reservoirs have important functions, such as water resource guarantee, flood control and drought resistance, biological habitat and maintaining regional economic development. In order to better clarify the impact of agricultural activities on the nutritional status of water bodies in small reservoirs, zooplankton were quantitatively collected from four small reservoirs in the Jiuxianshan agricultural area of Qufu, Shandong Province, in March and October 2023, respectively. The physical and chemical parameters in sampling points were determined simultaneously. Meanwhile, water samples were collected for nutrient salt analysis, and the eutrophication of water bodies in four reservoirs was evaluated using the comprehensive nutrient status index method. The research found that the species richness of zooplankton after farming (100 species) was significantly higher than that before farming (81 species) (p < 0.05). On the contrary, the dominant species of zooplankton after farming (7 species) were significantly fewer than those before farming (11 species). The estimation results of the standing stock of zooplankton indicated that the abundance and biomass of zooplankton after farming (92.72 ind./L, 0.13 mg/L) were significantly higher than those before farming (32.51 ind./L, 0.40 mg/L) (p < 0.05). Community similarity analysis based on zooplankton abundance (ANOSIM) indicated that there were significant differences in zooplankton communities before and after farming (R = 0.329, p = 0.001). The results of multi-dimensional non-metric sorting (NMDS) showed that the communities of zooplankton could be clearly divided into two: pre-farming communities and after farming communities. The Monte Carlo test results are as follows (p < 0.05). Transparency (Trans), pH, permanganate index (CODMn), electrical conductivity (Cond) and chlorophyll a (Chl-a) had significant effects on the community structure of zooplankton before farming. Total nitrogen (TN), total phosphorus (TP) and electrical conductivity (Cond) had significant effects on the community structure of zooplankton after farming. The co-linearity network analysis based on zooplankton abundance showed that the zooplankton community before farming was more stable than that after farming. The water evaluation results based on the comprehensive nutritional status index method indicated that the water conditions of the reservoirs before farming were mostly in a mild eutrophic state, while the water conditions of the reservoirs after farming were all in a moderate eutrophic state. The results show that the nutritional status of small reservoirs in agricultural areas is significantly affected by agricultural activities. The zooplankton communities in small reservoirs underwent significant changes driven by alterations in the reservoir water environment and nutritional status. Based on the main results of this study, we suggested that the use of fertilizers and pesticides should be appropriately reduced in future agricultural activities. In order to better protect the water quality and aquatic ecology of the water reservoirs in the agricultural area. Full article
(This article belongs to the Special Issue Diversity and Ecology of Freshwater Plankton)
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29 pages, 4148 KiB  
Article
Metabolomic and Pharmacological Approaches for Exploring the Potential of Tanacetum parthenium L. Root Culture as a Source of Bioactive Phytochemicals
by Aurelio Nieto-Trujillo, Rosendo Luria-Pérez, Francisco Cruz-Sosa, Carmen Zepeda-Gómez, María G. González-Pedroza, Cristina Burrola-Aguilar, Armando Sunny, José Correa-Basurto, José A. Guerrero-Analco, Juan L. Monribot-Villanueva and María Elena Estrada-Zúñiga
Int. J. Mol. Sci. 2025, 26(15), 7209; https://doi.org/10.3390/ijms26157209 - 25 Jul 2025
Viewed by 168
Abstract
Tanacetum parthenium (Asteraceae) has been traditionally used worldwide for medicinal purposes, and some of its therapeutic uses have been attributed to the pharmacological effects of its secondary metabolites. The root culture of this species might represent a sustainable source of several pharmacologically active [...] Read more.
Tanacetum parthenium (Asteraceae) has been traditionally used worldwide for medicinal purposes, and some of its therapeutic uses have been attributed to the pharmacological effects of its secondary metabolites. The root culture of this species might represent a sustainable source of several pharmacologically active compounds. The biomass of a root T. parthenium culture was extracted with methanol and fractionated using column chromatography. Three selected fractions (4TP, 5TP, and 8TP) were analyzed via spectrophotometric, chromatographic, and mass spectrometry techniques and in vitro pharmacological assays. The greatest values for total phenolic and phenolic acid contents and antibacterial activity against Escherichia coli were determined for 4TP. The highest values for total flavonoid and sesquiterpene lactone contents, antioxidant potential, and α-amylase inhibitory effect were determined for 8TP. The antibacterial effect against Staphylococcus aureus was not significantly different among the three fractions. The root culture of T. parthenium is a potential source of several metabolites, such as phenolic acids, fatty acids, coumarins, sesquiterpenoids, and triterpenoids, which are capable of exerting α-amylase inhibition and antioxidant, antibacterial, and cytotoxic effects. Among eight phenolic compounds detected and quantified in the fractions, chlorogenic acid was the most abundant. Full article
(This article belongs to the Special Issue Plant Phenolic Accumulation and Application in Human Diseases)
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21 pages, 2263 KiB  
Article
Elevational Patterns and Drivers of Soil Total, Microbial, and Enzymatic C:N:P Stoichiometry in Karst Peak-Cluster Depressions in Southwestern China
by Siyu Chen, Chaohao Xu, Cong Hu, Chaofang Zhong, Zhonghua Zhang and Gang Hu
Forests 2025, 16(8), 1216; https://doi.org/10.3390/f16081216 - 24 Jul 2025
Viewed by 204
Abstract
Elevational gradients in temperature, moisture, and vegetation strongly influence soil nutrient content and stoichiometry in mountainous regions. However, exactly how total, microbial, and enzymatic carbon (C), nitrogen (N), and phosphorus (P) stoichiometry vary with elevation in karst peak-cluster depressions remains poorly understood. To [...] Read more.
Elevational gradients in temperature, moisture, and vegetation strongly influence soil nutrient content and stoichiometry in mountainous regions. However, exactly how total, microbial, and enzymatic carbon (C), nitrogen (N), and phosphorus (P) stoichiometry vary with elevation in karst peak-cluster depressions remains poorly understood. To address this, we studied soil total, microbial, and enzymatic C:N:P stoichiometry in seasonal rainforests within karst peak-cluster depressions in southwestern China at different elevations (200, 300, 400, and 500 m asl) and depths (0–20 and 20–40 cm). We found that soil organic carbon (SOC), total nitrogen (TN), and the C:P and N:P ratios increased significantly with elevation, whereas total phosphorus (TP) decreased. Microbial phosphorus (MBP) also declined with elevation, while the microbial N:P ratio rose. Activities of nitrogen- (β-N-acetylglucosaminidase and L-leucine aminopeptidase combined) and phosphorus-related enzymes (alkaline phosphatase) increased markedly with elevation, suggesting potential phosphorus limitation for plant growth at higher elevations. Our results suggest that total, microbial, and enzymatic soil stoichiometry are collectively shaped by topography and soil physicochemical properties, with elevation, pH, and exchangeable calcium (ECa) acting as the key drivers. Microbial stoichiometry exhibited positive interactions with soil stoichiometry, while enzymatic stoichiometry did not fully conform to the expectations of resource allocation theory, likely due to the functional specificity of phosphatase. Overall, these findings enhance our understanding of C–N–P biogeochemical coupling in karst ecosystems, highlight potential nutrient limitations, and provide a scientific basis for sustainable forest management in tropical karst regions. Full article
(This article belongs to the Section Forest Soil)
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10 pages, 212 KiB  
Article
Heart Rate Variability Frequency-Domain Analysis Across Glaucoma Subtypes
by Misaki Ukisu, Yuto Yoshida, Hinako Takei, Keigo Takagi and Masaki Tanito
Biomedicines 2025, 13(8), 1805; https://doi.org/10.3390/biomedicines13081805 - 23 Jul 2025
Viewed by 240
Abstract
Background/Objectives: Heart rate variability (HRV) is a marker of autonomic nervous system function, based on fluctuations in heartbeat intervals. Although several studies have investigated the association between frequency-domain HRV parameters and glaucoma, evidence based on large sample sizes remains limited. Therefore, the [...] Read more.
Background/Objectives: Heart rate variability (HRV) is a marker of autonomic nervous system function, based on fluctuations in heartbeat intervals. Although several studies have investigated the association between frequency-domain HRV parameters and glaucoma, evidence based on large sample sizes remains limited. Therefore, the present study aimed to examine the relationship between frequency-domain HRV parameters and glaucoma subtypes, including primary open-angle glaucoma (PG) and exfoliation glaucoma (EG), using a larger sample size. Methods: Participants with primary open-angle glaucoma (PG), exfoliation glaucoma (EG), or no ocular disease other than cataract (controls) were recruited at Shimane University between June 2023 and July 2024. Frequency-domain HRV parameters (total power [TP], very-low-frequency [VLF], low-frequency [LF], high-frequency [HF], and LF/HF) were measured using a sphygmograph (TAS9 Pulse Analyzer Plus View). Group comparisons were conducted using unpaired t-tests, Fisher’s exact tests, and Tukey’s HSD test. Multivariate analyses were performed to identify factors associated with each HRV parameter. Results: A total of 809 participants were analyzed, including 522 with PG, 191 with EG, and 96 controls. The EG group showed significantly lower values across all frequency-domain HRV parameters compared to the PG group, and significantly lower LnLF values than the control group (p = 0.012). Multivariate analyses revealed that no significant associations were found between HRV measures and the presence of glaucoma or pseudoexfoliation material (PEM) deposition. Older age was significantly associated with lower values across all HRV parameters. Conclusions: In elderly glaucoma patients, age-related alterations in frequency-domain HRV parameters have been observed. Full article
(This article belongs to the Special Issue Glaucoma: New Diagnostic and Therapeutic Approaches, 2nd Edition)
15 pages, 4183 KiB  
Article
Identification and Functional Characterization of a Geraniol Synthase UrGES from Uncaria rhynchophylla
by Xinghui Liu, Wenqiang Chen, Linxuan Li, Detian Mu, Iain W. Wilson, Xueshuang Huang, Yahui Xiang, Lina Zhu, Limei Pan, Deyou Qiu and Qi Tang
Plants 2025, 14(15), 2273; https://doi.org/10.3390/plants14152273 - 23 Jul 2025
Viewed by 306
Abstract
Uncaria rhynchophylla, a medicinal plant extensively used in traditional Chinese medicine, is an important plant source of terpenoid indole alkaloids (TIAs), but the mechanism of TIA biosynthesis at molecular level remains unclear. Geraniol synthase (GES) serves as a crucial enzyme in catalyzing [...] Read more.
Uncaria rhynchophylla, a medicinal plant extensively used in traditional Chinese medicine, is an important plant source of terpenoid indole alkaloids (TIAs), but the mechanism of TIA biosynthesis at molecular level remains unclear. Geraniol synthase (GES) serves as a crucial enzyme in catalyzing the formation of geraniol from geranyl pyrophosphate (GPP) in various plants, but the functional characterization of the GES gene in U. rhynchophylla has not been investigated. In this study, a GES was identified and characterized through genome mining and bioinformatic analysis. Functional validation was performed via a protein catalysis experiment, transient expression in Nicotiana benthamiana, and methyl jasmonate (MeJA) induction experiments. The full-length UrGES gene was 1761 bp, encoding a protein product of 586 amino acids with an estimated 67.5 kDa molecular weight. Multiple sequence alignments and phylogenetic analysis placed UrGES within the terpene synthase g (TPS-g) subfamily, showing high similarity to known GESs from other plants. Enzymatic assays confirmed that recombinant UrGES catalyzed GPP conversion to a single product of geraniol. The transient expression of UrGES resulted in geraniol accumulation in N. benthamiana, further confirming its function in vivo. UrGES expression was observed in leaves, stems, and roots, where leaves had the highest transcript levels. Moreover, MeJA treatment significantly upregulated UrGES expression, which positively correlated with an increase in alkaloid content. This study functionally characterizes UrGES as a geraniol synthase in U. rhynchophylla, contributing to the current knowledge of the TIA biosynthetic pathway. These findings may offer insights for future metabolic engineering aiming to enhance TIA yields for pharmaceutical and industrial applications. Full article
(This article belongs to the Special Issue Secondary Metabolite Biosynthesis in Plants)
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11 pages, 1677 KiB  
Article
Exposure to Treponema pallidum Alters Villous Histomorphology of Human Placentae
by Patience B. Tetteh-Quarcoo, Joana Twasam, John Ahenkorah, Bismarck Afedo Hottor, Nicholas T. K. D. Dayie, Stephen Opoku-Nyarko, Peter Ofori Appiah, Emmanuel Afutu, Fleischer C. N. Kotey, Eric S. Donkor, Emilia Asuquo Udofia, Nii Koney-Kwaku Koney, Benjamin Arko-Boham and Kevin Kofi Adutwum-Ofosu
Acta Microbiol. Hell. 2025, 70(3), 31; https://doi.org/10.3390/amh70030031 - 23 Jul 2025
Viewed by 163
Abstract
Syphilis, which is caused by Treponema pallidum, remains one of the most common congenital infection worldwide and has tremendous consequences for the mother and her developing foetus if left untreated. The complexity of the exposure to this pathogen extends beyond the well-established [...] Read more.
Syphilis, which is caused by Treponema pallidum, remains one of the most common congenital infection worldwide and has tremendous consequences for the mother and her developing foetus if left untreated. The complexity of the exposure to this pathogen extends beyond the well-established clinical manifestations, as it can profoundly affect placental histomorphology. This study aimed to compare T. pallidum-exposed placental villi structures with healthy placentae at term to evaluate the histomorphological differences using stereology. In this case-control study conducted at term (38 weeks ± 2 weeks), 78 placentae were collected from the hospital delivery suites, comprising 39 cases (T. pallidum-exposed) and 39 controls (non-exposed), who were gestational age-matched with other potential confounders excluded. Blood samples from the umbilical vein and placental basal plate were tested for syphilis, using rapid diagnostic test (RDT) kits for T. pallidum (TP) antibodies (IgG and IgM) to classify placentae as exposed to T. pallidum (cases) and non-exposed (controls). Tissue sections were prepared and stained with haematoxylin and eosin, and the mean volume densities of syncytial knots, foetal capillaries, syncytial denuded areas, and intervillous spaces were estimated using stereological methods. Statistical analysis was performed to compare the mean values between the case and control groups. Stereological assessment revealed significant differences between the T. pallidum-exposed and non-exposed groups with regard to syncytial knots (p < 0.0001), syncytial denudation (p < 0.0001), and foetal capillaries (p < 0.0001), but no significant difference in the intervillous space was found (p = 0.1592). Therefore, our study shows, for the first time, that the histomorphology of human placental villi appears to be altered by exposure to T. pallidum. It will, therefore, be interesting to determine whether these changes in the placental villi translate into long-term effects on the baby. Full article
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15 pages, 2209 KiB  
Article
Exploration of Phosphorus Release Characteristics in Sediments from the Plains River Network: Vertical Distribution and the Response of Phosphorus and Microorganisms
by Xiaoshuang Dong, Haojie Chen, Yongsheng Chang, Xixi Yang, Haoran Yang and Wei Huang
Water 2025, 17(15), 2196; https://doi.org/10.3390/w17152196 - 23 Jul 2025
Viewed by 180
Abstract
Plains River networks are important natural ecosystems that play a vital role in storing, draining, conserving, and purifying water. This study selected the river network in the northern plain of Jiaxing as the research area. Samples were collected in October 2023. Sediments were [...] Read more.
Plains River networks are important natural ecosystems that play a vital role in storing, draining, conserving, and purifying water. This study selected the river network in the northern plain of Jiaxing as the research area. Samples were collected in October 2023. Sediments were collected using a sampler and divided into five layers according to the collection depth, namely the surface layer (5 cm), the second layer (15 cm), the third layer (25 cm), the fourth layer (35 cm), and the bottom layer (45 cm). This study analyzed the vertical distribution of each form of phosphorus, the vertical distribution of the microbial community, and the response between the two in the sediments of this plain river network. The results showed high sediment TP concentrations (633.9–2534.7 mg/kg) in this plain river network. The vertical distribution trend of Fe-P was almost the same as that of TP and had the highest concentration (134.9–1860.1 mg/kg). Ca-P is the second highest phosphorus content, which is also an inert phosphorus component, as well as Al-P, and both exhibit a relatively low percentage of surface layers. Proteobacteria, Firmicutes, Bacteroidetes, and Actinobacteria showed heterogeneity in the vertical distribution of sediments. The river network sediments in the Plains River have a high potential for phosphorus release, with most sites acting as phosphorus “sources”. The sediments in the second of these layers show a strong tendency to release phosphorus. Bottom sediments have a low capacity to both adsorb and release phosphorus. The findings of this study will provide a theoretical foundation for the prevention and management of river networks in this plain. Full article
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16 pages, 2162 KiB  
Review
Teriparatide for Guided Bone Regeneration in Craniomaxillofacial Defects: A Systematic Review of Preclinical Studies
by Jessika Dethlefs Canto, Carlos Fernando Mourão, Vittorio Moraschini, Rafael da Silva Bonato, Suelen Cristina Sartoretto, Monica Diuana Calasans-Maia, José Mauro Granjeiro and Rafael Seabra Louro
Curr. Issues Mol. Biol. 2025, 47(8), 582; https://doi.org/10.3390/cimb47080582 - 23 Jul 2025
Viewed by 141
Abstract
This systematic review aimed to evaluate the effectiveness of teriparatide (TP) in guided bone regeneration (GBR). An electronic search without language or date restrictions was performed in PubMed, Web of Science, Scopus, Scielo, and gray literature for articles published until June 2025. Inclusion [...] Read more.
This systematic review aimed to evaluate the effectiveness of teriparatide (TP) in guided bone regeneration (GBR). An electronic search without language or date restrictions was performed in PubMed, Web of Science, Scopus, Scielo, and gray literature for articles published until June 2025. Inclusion criteria considered studies evaluating the effect of TP on bone regeneration, analyzed using SYRCLE’s Risk of Bias tool. Twenty-four preclinical studies were included, covering diverse craniofacial models (mandibular, calvarial, extraction sockets, sinus augmentation, distraction osteogenesis, segmental defects) and employing systemic or local TP administration. Teriparatide consistently enhanced osteogenesis, graft integration, angiogenesis, and mineralization, with potentiated effects when combined with various biomaterials, including polyethylene glycol (PEG), hydroxyapatite/tricalcium phosphate (HA/TCP), biphasic calcium phosphate (BCP), octacalcium phosphate collagen (OCP/Col), enamel matrix derivatives (EMDs), autografts, allografts, xenografts (Bio-Oss), strontium ranelate, and bioactive glass. Critically, most studies presented a moderate-to-high risk of bias, with insufficient randomization, allocation concealment, and blinding, which limited the internal validity of the findings. TP shows promising osteoanabolic potential in guided bone regeneration, enhancing bone formation, angiogenesis, and scaffold integration across preclinical models. Nonetheless, its translation to clinical practice requires well-designed human randomized controlled trials to define optimal dosing strategies, long-term safety, and its role in oral and craniomaxillofacial surgical applications. Full article
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