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15 pages, 580 KiB  
Article
Reliability and Inter-Device Agreement Between a Portable Handheld Ultrasound Scanner and a Conventional Ultrasound System for Assessing the Thickness of the Rectus Femoris and Vastus Intermedius
by Carlante Emerson, Hyun K. Kim, Brian A. Irving and Efthymios Papadopoulos
J. Funct. Morphol. Kinesiol. 2025, 10(3), 299; https://doi.org/10.3390/jfmk10030299 (registering DOI) - 1 Aug 2025
Abstract
Background: Ultrasound (U/S) can be used to evaluate skeletal muscle characteristics in clinical and sports settings. Handheld U/S devices have recently emerged as a cheaper and portable alternative to conventional U/S systems. However, further research is warranted on their reliability. We assessed the [...] Read more.
Background: Ultrasound (U/S) can be used to evaluate skeletal muscle characteristics in clinical and sports settings. Handheld U/S devices have recently emerged as a cheaper and portable alternative to conventional U/S systems. However, further research is warranted on their reliability. We assessed the reliability and inter-device agreement between a handheld U/S device (Clarius L15 HD3) and a more conventional U/S system (GE LOGIQ e) for measuring the thickness of the rectus femoris (RF) and vastus intermedius (VI). Methods: Cross-sectional images of the RF and VI muscles were obtained in 20 participants by two assessors, and on two separate occasions by one of those assessors, using the Clarius L15 HD3 and GE LOGIQ e devices. RF and VI thickness measurements were obtained to determine the intra-rater reliability, inter-rater reliability, and inter-device agreement. Results: All intraclass correlation coefficients (ICCs) were above 0.9 for intra-rater reliability (range: 0.94 to 0.97), inter-rater reliability (ICC: 0.97), and inter-device agreement (ICC: 0.98) when comparing the two devices in assessing RF and VI thickness. For the RF, the Bland–Altman plot revealed a mean difference of 0.06 ± 0.07 cm, with limits of agreement ranging from 0.21 to −0.09, whereas for the VI, the Bland–Altman plot showed a mean difference of 0.07 ± 0.10 cm, with limits of agreement ranging from 0.27 to −0.13. Conclusions: The handheld Clarius L15 HD3 was reliable and demonstrated high agreement with the more conventional GE LOGIQ e for assessing the thickness of the RF and VI in young, healthy adults. Full article
(This article belongs to the Section Kinesiology and Biomechanics)
11 pages, 1217 KiB  
Article
Spatial Anisotropy of Photoelasticity Determined by Path Difference in Ba3TaGa3Si2O14 Crystals
by Natalia Demyanyshyn, Oleh Buryy, Bohdan Mytsyk, Pavlo Solomenchuk, Oleksandr Lishchuk and Anatoliy Andrushchak
Crystals 2025, 15(8), 708; https://doi.org/10.3390/cryst15080708 (registering DOI) - 31 Jul 2025
Abstract
The elastic and photoelastic coefficients of Ba3TaGa3Si2O14 (BTGS) crystals were determined by the quantum–mechanical calculation technique. Based on these data, extreme piezo-optic surfaces π′°km were constructed, which describe the change in the path difference [...] Read more.
The elastic and photoelastic coefficients of Ba3TaGa3Si2O14 (BTGS) crystals were determined by the quantum–mechanical calculation technique. Based on these data, extreme piezo-optic surfaces π′°km were constructed, which describe the change in the path difference in light beams in the crystal under the influence of mechanical stress. The results for BTGS crystals are compared with the ones for other crystals of the langasite group (La3Ga5SiO14, Ca3Ga2Ge4O14, Ca3TaGa3Si2O14 and Ca3NbGa3Si2O14). The global maxima of the π′°km surfaces for BTGS crystals significantly exceed the ones for the other crystals mentioned above and, accordingly, BTGS crystals can be suitable for use in polarization-optic light modulators and devices based on them. The acousto-optic efficiency of BTGS crystals was evaluated. The correlations between the magnitude of the piezo- and elasto-optic coefficients and the parameters of the unit cell of the studied crystals were determined. Full article
(This article belongs to the Special Issue Design and Synthesis of Functional Crystal Materials)
25 pages, 3263 KiB  
Article
Repurposing Nirmatrelvir for Hepatocellular Carcinoma: Network Pharmacology and Molecular Dynamics Simulations Identify HDAC3 as a Key Molecular Target
by Muhammad Suleman, Hira Arbab, Hadi M. Yassine, Abrar Mohammad Sayaf, Usama Ilahi, Mohammed Alissa, Abdullah Alghamdi, Suad A. Alghamdi, Sergio Crovella and Abdullah A. Shaito
Pharmaceuticals 2025, 18(8), 1144; https://doi.org/10.3390/ph18081144 - 31 Jul 2025
Abstract
Background: Hepatocellular carcinoma (HCC) is one of the most common and fatal malignancies worldwide, characterized by remarkable molecular heterogeneity and poor clinical outcomes. Despite advancements in diagnosis and treatment, the prognosis for HCC remains dismal, largely due to late-stage diagnosis and limited therapeutic [...] Read more.
Background: Hepatocellular carcinoma (HCC) is one of the most common and fatal malignancies worldwide, characterized by remarkable molecular heterogeneity and poor clinical outcomes. Despite advancements in diagnosis and treatment, the prognosis for HCC remains dismal, largely due to late-stage diagnosis and limited therapeutic efficacy. Therefore, there is a critical need to identify novel therapeutic targets and explore alternative strategies, such as drug repurposing, to improve patient outcomes. Methods: In this study, we employed network pharmacology, molecular docking, and molecular dynamics (MD) simulations to explore the potential therapeutic targets of Nirmatrelvir in HCC. Results: Nirmatrelvir targets were predicted through SwissTarget (101 targets), SuperPred (1111 targets), and Way2Drug (38 targets). Concurrently, HCC-associated genes (5726) were retrieved from DisGeNet. Cross-referencing the two datasets identified 29 overlapping proteins. A protein–protein interaction (PPI) network constructed from the overlapping proteins was analyzed using CytoHubba, identifying 10 hub genes, with HDAC1, HDAC3, and STAT3 achieving the highest degree scores. Molecular docking revealed a strong binding affinity of Nirmatrelvir to HDAC1 (docking score = −7.319 kcal/mol), HDAC3 (−6.026 kcal/mol), and STAT3 (−6.304 kcal/mol). Moreover, Nirmatrelvir displayed stable dynamic behavior in repeated 200 ns simulation analyses. Binding free energy calculations using MM/GBSA showed values of −23.692 kcal/mol for the HDAC1–Nirmatrelvir complex, −33.360 kcal/mol for HDAC3, and −21.167 kcal/mol for STAT3. MM/PBSA analysis yielded −17.987 kcal/mol for HDAC1, −27.767 kcal/mol for HDAC3, and −16.986 kcal/mol for STAT3. Conclusions: The findings demonstrate Nirmatrelvir’s strong binding affinity towards HDAC3, underscoring its potential for future drug development. Collectively, the data provide computational evidence for repurposing Nirmatrelvir as a multi-target inhibitor in HCC therapy, warranting in vitro and in vivo studies to confirm its clinical efficacy and safety and elucidate its mechanisms of action in HCC. Full article
(This article belongs to the Section Pharmacology)
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15 pages, 6090 KiB  
Article
Vacuum Brazing of 6061 Aluminum Using Al-Si-Ge Filler Metals with Different Si Contents
by Sen Huang, Jiguo Shan, Jian Qin, Yuanxun Shen, Chao Jiang and Peiyao Jing
Metals 2025, 15(8), 857; https://doi.org/10.3390/met15080857 (registering DOI) - 31 Jul 2025
Viewed by 132
Abstract
Al-xSi-35Ge (x = 4, 6, 8, 10, 12, wt.%) filler metals were prepared to vacuum braze 6061 aluminum alloy. The wettability of filler metals was studied. A thermodynamics model of the Al-Si-Ge ternary alloy was established to analyze the mechanism and impact of [...] Read more.
Al-xSi-35Ge (x = 4, 6, 8, 10, 12, wt.%) filler metals were prepared to vacuum braze 6061 aluminum alloy. The wettability of filler metals was studied. A thermodynamics model of the Al-Si-Ge ternary alloy was established to analyze the mechanism and impact of Si in the microstructure of the brazed joint. The findings indicated that Si addition had a slight effect on the melting point of Al-xSi-35Ge filler metals. Great molten temperature region of fillers was responsible for the loss of Ge during the wetting process, making residual filler metal difficult to melt. The microstructure of the joint was characterized by a multilayer structure that was primarily composed of three zones: two transition regions (Zone I) and a filler residual region (Zone II). There was liquidation of filler metal for Al-Si-35Ge filler metals during brazing, resulting in holes and cracks in joints. Increasing the Si content in fillers could alleviate the liquidation of filler metal, owing to diminishing difference of chemical potential of Ge (μGe) in fillers and 6061 substrates, hindering the diffusion of Ge from filler metal to substrates. Full article
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13 pages, 513 KiB  
Article
Impact of Dietary Inputs on Carbapenem Resistance Gene Dynamics and Microbial Safety During Bioconversion of Agri-Food Waste and Anaerobic Digestate by Hermetia illucens Larvae
by Andrea Marcelli, Alessio Ilari, Vesna Milanović, Ester Foppa Pedretti, Kofi Armah Boakye-Yiadom, Federica Cardinali, Giorgia Rampanti, Andrea Osimani, Cristiana Garofalo and Lucia Aquilanti
Genes 2025, 16(8), 907; https://doi.org/10.3390/genes16080907 - 29 Jul 2025
Viewed by 119
Abstract
Background/Objectives: Hermetia illucens larvae can efficiently convert agri-food residues into high-protein biomass for animal feed and nutrient-rich frass for soil amendment. However, the potential spread of carbapenem resistance genes (CRGs), which confer resistance to last-resort carbapenem antibiotics, and Enterobacteriaceae, common carriers of [...] Read more.
Background/Objectives: Hermetia illucens larvae can efficiently convert agri-food residues into high-protein biomass for animal feed and nutrient-rich frass for soil amendment. However, the potential spread of carbapenem resistance genes (CRGs), which confer resistance to last-resort carbapenem antibiotics, and Enterobacteriaceae, common carriers of these genes and opportunistic pathogens, raises important safety concerns. This study aimed to assess the influence of different agri-food-based diets on Enterobacteriaceae loads and the CRG occurrence during the bioconversion process. Methods: Four experimental diets were formulated from agri-food residues and anaerobic digestate: Diet 1 (peas and chickpea waste), Diet 2 (peas and wheat waste), Diet 3 (onion and wheat waste), and Diet 4 (wheat waste and digestate). Enterobacteriaceae were quantified by viable counts, while five CRGs (blaKPC, blaNDM, blaOXA-48, blaVIM, and blaGES) were detected and quantified using quantitative PCRs (qPCRs). Analyses were performed on individual substrates, formulated diets, larvae (before and after bioconversion), and frass. Results: Plant-based diets sustained moderate Enterobacteriaceae loads. In contrast, the digestate-based diet led to a significant increase in Enterobacteriaceae in both the frass and mature larvae. CRGs were detected only in legume-based diets: blaVIM and blaGES were found in both mature larvae and frass, while blaOXA-48 and blaKPC were found exclusively in either larvae or frass. No CRGs were detected in onion- or digestate-based diets nor in young larvae or diet inputs. Conclusions: The findings suggest that the diet composition may influence the proliferation of Enterobacteriaceae and the persistence of CRGs. Careful substrate selection and process monitoring are essential to minimize antimicrobial resistance risks in insect-based bioconversion systems. Full article
(This article belongs to the Section Microbial Genetics and Genomics)
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31 pages, 11019 KiB  
Review
A Review of Tunnel Field-Effect Transistors: Materials, Structures, and Applications
by Shupeng Chen, Yourui An, Shulong Wang and Hongxia Liu
Micromachines 2025, 16(8), 881; https://doi.org/10.3390/mi16080881 - 29 Jul 2025
Viewed by 291
Abstract
The development of an integrated circuit faces the challenge of the physical limit of Moore’s Law. One of the most important “Beyond Moore” challenges is the scaling down of Metal-Oxide-Semiconductor Field-Effect Transistors (MOSFETs) versus their increasing static power consumption. This is because, at [...] Read more.
The development of an integrated circuit faces the challenge of the physical limit of Moore’s Law. One of the most important “Beyond Moore” challenges is the scaling down of Metal-Oxide-Semiconductor Field-Effect Transistors (MOSFETs) versus their increasing static power consumption. This is because, at room temperature, the thermal emission transportation mechanism will cause a physical limitation on subthreshold swing (SS), which is fundamentally limited to a minimum value of 60 mV/decade for MOSFETs, and accompanied by an increase in off-state leakage current with the process of scaling down. Moreover, the impacts of short-channel effects on device performance also become an increasingly severe problem with channel length scaling down. Due to the band-to-band tunneling mechanism, Tunnel Field-Effect Transistors (TFETs) can reach a far lower SS than MOSFETs. Recent research works indicated that TFETs are already becoming some of the promising candidates of conventional MOSFETs for ultra-low-power applications. This paper provides a review of some advances in materials and structures along the evolutionary process of TFETs. An in-depth discussion of both experimental works and simulation works is conducted. Furthermore, the performance of TFETs with different structures and materials is explored in detail as well, covering Si, Ge, III-V compounds and 2D materials, alongside different innovative device structures. Additionally, this work provides an outlook on the prospects of TFETs in future ultra-low-power electronics and biosensor applications. Full article
(This article belongs to the Special Issue MEMS/NEMS Devices and Applications, 3rd Edition)
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9 pages, 429 KiB  
Article
The Epidemiology of Urinary Tract Trauma: Results from the GRAND Study
by Nikolaos Pyrgidis, Julian Marcon, Gerald Bastian Schulz, Patrick Keller, Yannic Volz, Lennert Eismann, Robert Bischoff, Paulo L. Pfitzinger, Michael Chaloupka, Christian Stief and Philipp Weinhold
J. Clin. Med. 2025, 14(15), 5343; https://doi.org/10.3390/jcm14155343 - 29 Jul 2025
Viewed by 142
Abstract
Background: Urinary tract trauma encompasses injuries to the kidneys, ureters, urinary bladder, and urethra and can result from both external and iatrogenic causes. We aimed to evaluate the epidemiology, clinical characteristics, and in-hospital outcomes of urinary tract trauma in Germany. Methods: We analyzed [...] Read more.
Background: Urinary tract trauma encompasses injuries to the kidneys, ureters, urinary bladder, and urethra and can result from both external and iatrogenic causes. We aimed to evaluate the epidemiology, clinical characteristics, and in-hospital outcomes of urinary tract trauma in Germany. Methods: We analyzed data from the GeRmAn Nationwide inpatient Data (GRAND) registry, provided by the Research Data Center of the Federal Bureau of Statistics, from 2005 to 2023. We included patients admitted to the hospital with kidney, ureteral, urinary bladder, or urethral trauma. We assessed baseline characteristics, perioperative outcomes, surgical interventions, in-hospital all-cause mortality, and trends. Results: We identified 239,657 patients with urinary tract trauma: 109,376 with kidney, 34,330 with ureteral, 57,886 with bladder, and 38,065 with urethral trauma. While the incidence of kidney trauma declined, the incidence of ureteral, bladder, and urethral trauma steadily increased over time. Kidney trauma was the most common trauma, affecting younger males (median age of 47 years), and was associated with in-hospital all-cause mortality of 2.4% and transfusion rates of 15%. Ureteral stenting was necessary in 9.3% and nephrectomy in 2.6% of all patients with kidney trauma. Moreover, ureteral, bladder, and urethral trauma predominantly affected older, multimorbid patients, leading to higher rates of transfusion (22–25%), intensive care unit admission (12–15%), and mortality (3.2–6.4%). Ureteral anastomosis was necessary in 14% of all ureteral injuries. Bladder repair was required in 53% of all patients with bladder injury, while 1% of these patients required cystectomy. Accordingly, urethral reconstruction was performed in 7.2% of all patients with urethral trauma. Conclusions: These findings highlight the evolving landscape of urinary tract trauma and underscore the need for tailored management strategies and preventive measures. Full article
(This article belongs to the Special Issue Clinical Trends and Prospects in Urology Surgery)
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20 pages, 3123 KiB  
Article
Plant Electrophysiological Parameters Represent Leaf Intracellular Water–Nutrient Metabolism and Immunoregulations in Brassica rapa During Plasmodiophora Infection
by Antong Xia, Yanyou Wu, Kun Zhai, Dongshan Xiang, Lin Li, Zhanghui Qin and Gratien Twagirayezu
Plants 2025, 14(15), 2337; https://doi.org/10.3390/plants14152337 - 29 Jul 2025
Viewed by 202
Abstract
Although Brassica rapa (B. rapa) is vital in agricultural production and vulnerable to the pathogen Plasmodiophora, the intracellular water–nutrient metabolism and immunoregulation of Plasmodiophora infection in B. rapa leaves remain unclear. This study aimed to analyze the responsive mechanisms of [...] Read more.
Although Brassica rapa (B. rapa) is vital in agricultural production and vulnerable to the pathogen Plasmodiophora, the intracellular water–nutrient metabolism and immunoregulation of Plasmodiophora infection in B. rapa leaves remain unclear. This study aimed to analyze the responsive mechanisms of Plasmodiophora-infected B. rapa using rapid detection technology. Six soil groups planted with Yangtze No. 5 B. rapa were inoculated with varying Plasmodiophora concentrations (from 0 to 10 × 109 spores/mL). The results showed that at the highest infection concentration (PWB5, 10 × 109 spores/mL) of B. rapa leaves, the plant electrophysiological parameters showed the intracellular water-holding capacity (IWHC), the intracellular water use efficiency (IWUE), and the intracellular water translocation rate (IWTR) declined by 41.99–68.86%. The unit for translocation of nutrients (UNF) increased by 52.83%, whereas the nutrient translocation rate (NTR), the nutrient translocation capacity (NTC), the nutrient active translocation (NAT) value, and the nutrient active translocation capacity (NAC) decreased by 52.40–77.68%. The cellular energy metabolism decreased with worsening Plasmodiophora infection, in which the units for cellular energy metabolism (∆GE) and cellular energy metabolism (∆G) of the leaves decreased by 44.21% and 78.14% in PWB5, respectively. Typically, based on distribution of B-type dielectric substance transfer percentage (BPn), we found PWB4 (8 × 109 spores/mL) was the maximal immune response concentration, as evidenced by a maximal BPnR (B-type dielectric substance transfer percentage based on resistance), with increasing lignin and cork deposition to enhance immunity, and a minimum BPnXc (B-type dielectric substance transfer percentage based on capacitive reactance), with a decreasing quantity of surface proteins in the B. rapa leaves. This study suggests plant electrophysiological parameters could characterize intracellular water–nutrient metabolism and immunoregulation of B. rapa leaves under various Plasmodiophora infection concentrations, offering a dynamic detection method for agricultural disease management. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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11 pages, 1259 KiB  
Article
Biological Properties and Phenolic Characterization of MetabolAid®: Combination of Plant-Derivate Compound Extracts
by Francesco Vizzarri, Aneta Kisova, Ivana Spevakova, Andrea Raffaelli, Vincenzo Longo and Luisa Pozzo
Processes 2025, 13(8), 2405; https://doi.org/10.3390/pr13082405 - 29 Jul 2025
Viewed by 142
Abstract
In recent years, most of the populations of the world have been using herbal materials for their strong antimicrobial properties and major health benefits. The objective of this study was to evaluate the phenolic profile, as well as the antioxidant and antimicrobial activities, [...] Read more.
In recent years, most of the populations of the world have been using herbal materials for their strong antimicrobial properties and major health benefits. The objective of this study was to evaluate the phenolic profile, as well as the antioxidant and antimicrobial activities, of a dietary supplement composed of extracts from hibiscus (Hibiscus sabdariffa L.) calyces and lemon verbena (Lippia citriodora) leaves (Metabolaid®, Patent P201731147) mixed at a weight ratio of 35:65 (w/w), respectively. The bioactive components of the methanolic extract were analyzed by UHPLC-ESI-MS/MS. The antioxidant activity was evaluated using spectrophotometric methods, while the antimicrobial activity was assessed through the microdilution method against selected Gram-negative and Gram-positive bacteria. The total phenols content resulted in being 256.10 ± 2.26 mg GAE/g f.w., the flavonoid content was 48.90 ± 2.95 mg CE/g f.w., flavonols were 60.17 ± 7.68 mg QE/g f.w., and anthocyanins were 3.78 ± 0.17 mg C3GE/g f.w. The FRAP value, observed in the natural mix additive, was 1.25 ± 0.03 mg Fe2+/g f.w., while the ORAC showed the value of 1893.77 ± 30.39 µmol TE/g f.w. and the DPPH was 23.33 ± 4.12 µg/mL. We found eight phenolic acids, seven flavonols, five anthocyanins, and nine other phenolic compounds. The extract showed a minimum inhibitory concentration (MIC) of 12.5 mg/mL against E. coli, E. aerogenes, and E. faecalis and of 25 mg/mL against S. enterica ser. Typhimurium and S. aureus and a minimum bactericidal concentration (MBC) of 25 mg/mL against E. coli, E. aerogenes, and E. faecalis and of 50 mg/mL against S. enterica ser. Typhimurium and S. aureus. In conclusion, our findings demonstrate that Metabolaid® is a rich source of bioactive compounds and provides beneficial effects against oxidative stress and pathogenic bacteria, supporting its nutraceutical potential. Full article
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16 pages, 5933 KiB  
Article
Chemical Peculiarities of Quartz from Peralkaline Granitoids
by Karel Breiter, Jindřich Kynický, Michaela Vašinová Galiová and Michaela Hložková
Minerals 2025, 15(8), 790; https://doi.org/10.3390/min15080790 - 28 Jul 2025
Viewed by 213
Abstract
Quartz from four typical but contrasting peralkaline quartz-saturated granite systems (Khan Bogd and Khalzan Buregte plutons (Mongolia), Ivigtut stock (Greenland), Europa and Madeira plutons (Pitinga magmatic province, Brazil)) was analyzed using LA-ICP-MS to define the range of selected trace element content and trends [...] Read more.
Quartz from four typical but contrasting peralkaline quartz-saturated granite systems (Khan Bogd and Khalzan Buregte plutons (Mongolia), Ivigtut stock (Greenland), Europa and Madeira plutons (Pitinga magmatic province, Brazil)) was analyzed using LA-ICP-MS to define the range of selected trace element content and trends in their evolution and to compare this content with published data from granitoids of other geochemical types. The evaluation of about 1100 analyses found the studied trace elements mostly in ranges <0.01–18 ppm Li (median 2.41 ppm), 1.2–77 ppm Ti (median 8.2 ppm), 8.3–163 ppm Al (median 42 ppm) and 0.05–5.7 ppm Ge (median 0.98 ppm) (in all cases 5% of the lowest and 5% of the highest values were omitted). Quartz from geochemically less evolved riebeckite-bearing granite plutons shows no Ti/Ge fractionation and displays either a positive Ti–Al correlation or no Ti–Al correlation. More fractionated and potentially mineralized peralkaline magmatic systems were formed within two distinct magmatic episodes: quartz from the older phases is relatively Ti-rich and evolved via Ti decrease with no possible Ge enrichment, while quartz from younger phases is Ti-poor from the beginning and has the ability of enrichment in Al and Ge. Relative enrichment in Al and increase in Ge/Ti value of quartz can serve as a supporting method for the identification of potentially ore-bearing magmatic systems. Full article
(This article belongs to the Special Issue Physicochemical Properties and Purification of Quartz Minerals)
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25 pages, 8335 KiB  
Article
Integrative In Silico and In Vivo Analysis of Banhasasim-Tang for Irritable Bowel Syndrome: Mechanistic Insights into Inflammation-Related Pathways
by Woo-Gyun Choi, Seok-Jae Ko, Jung-Ha Shim, Chang-Hwan Bae, Seungtae Kim, Jae-Woo Park and Byung-Joo Kim
Pharmaceuticals 2025, 18(8), 1123; https://doi.org/10.3390/ph18081123 - 27 Jul 2025
Viewed by 375
Abstract
Background/Objectives: Banhasasim-tang (BHSST) is a traditional herbal formula commonly used to treat gastrointestinal (GI) disorders and has been considered a potential therapeutic option for irritable bowel syndrome (IBS). This study aimed to explore the molecular targets and underlying mechanisms of BHSST in IBS [...] Read more.
Background/Objectives: Banhasasim-tang (BHSST) is a traditional herbal formula commonly used to treat gastrointestinal (GI) disorders and has been considered a potential therapeutic option for irritable bowel syndrome (IBS). This study aimed to explore the molecular targets and underlying mechanisms of BHSST in IBS using a combination of network pharmacology, molecular docking, molecular dynamics simulations, and in vivo validation. Methods: Active compounds in BHSST were screened based on drug-likeness and oral bioavailability. Potential targets were predicted using ChEMBL, and IBS-related targets were obtained from GeneCards and DisGeNET. A compound–target–disease network was constructed and analyzed via Gene Ontology and KEGG pathway enrichment. Compound–target interactions were further assessed using molecular docking and molecular dynamics simulations. The in vivo effects of eudesm-4(14)-en-11-ol, elemol, and BHSST were evaluated in a zymosan-induced IBS mouse model. Results: Twelve BHSST-related targets were associated with IBS, with enrichment analysis identifying TNF signaling and apoptosis as key pathways. In silico simulations suggested stable binding of eudesm-4(14)-en-11-ol to TNF-α and kanzonol T to PIK3CD, whereas elemol showed weak interaction with PRKCD. In vivo, eudesm-4(14)-en-11-ol improved colon length, weight, stool consistency, TNF-α levels, and pain-related behaviors—effects comparable to those of BHSST. Elemol, however, showed no therapeutic benefit. Conclusions: These findings provide preliminary mechanistic insight into the anti-inflammatory potential of BHSST in IBS. The integrated in silico and in vivo approaches support the contribution of specific components, such as eudesm-4(14)-en-11-ol, to its observed effects, warranting further investigation. Full article
(This article belongs to the Special Issue Network Pharmacology of Natural Products, 2nd Edition)
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14 pages, 1333 KiB  
Article
Reliable RT-qPCR Normalization in Polypogon fugax: Reference Gene Selection for Multi-Stress Conditions and ACCase Expression Analysis in Herbicide Resistance
by Yufei Zhao, Xu Yang, Qiang Hu, Jie Zhang, Sumei Wan and Wen Chen
Agronomy 2025, 15(8), 1813; https://doi.org/10.3390/agronomy15081813 - 26 Jul 2025
Viewed by 203
Abstract
Asia minor bluegrass (Polypogon fugax), a widespread Poaceae weed, exhibits broad tolerance to abiotic stresses. Validated reference genes (RGs) for reliable RT-qPCR normalization in this ecologically and agriculturally significant species remain unidentified. This study identified eight candidate RGs using transcriptome data [...] Read more.
Asia minor bluegrass (Polypogon fugax), a widespread Poaceae weed, exhibits broad tolerance to abiotic stresses. Validated reference genes (RGs) for reliable RT-qPCR normalization in this ecologically and agriculturally significant species remain unidentified. This study identified eight candidate RGs using transcriptome data from seedling tissues. We assessed the expression stability of these eight RGs across various abiotic stresses and developmental stages using Delta Ct, BestKeeper, geNorm, and NormFinder algorithms. A comprehensive stability ranking was generated using RefFinder, with validation performed using the target genes COR413 and P5CS. Results identified EIF4A and TUB as the optimal RG combination for normalizing gene expression during heat stress, cold stress, and growth stages. EIF4A and ACT were most stable under drought stress, EIF4A and 28S under salt stress, and EIF4A and EF-1 under cadmium (Cd) stress. Furthermore, EIF4A and UBQ demonstrated optimal stability under herbicide stress. Additionally, application of validated RGs revealed higher acetyl-CoA carboxylase gene (ACCase) expression in one herbicide-resistant population, suggesting target-site gene overexpression contributes to resistance. This work presents the first systematic evaluation of RGs in P. fugax. The identified stable RGs provide essential tools for future gene expression studies on growth and abiotic stress responses in this species, facilitating deeper insights into the molecular basis of its weediness and adaptability. Full article
(This article belongs to the Special Issue Adaptive Evolution in Weeds: Molecular Basis and Management)
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14 pages, 3224 KiB  
Article
Impact of Charge Carrier Trapping at the Ge/Si Interface on Charge Transport in Ge-on-Si Photodetectors
by Dongyan Zhao, Yali Shao, Shuo Zhang, Tanyi Li, Boming Chi, Yaxing Zhu, Fang Liu, Yingzong Liang and Sichao Du
Electronics 2025, 14(15), 2982; https://doi.org/10.3390/electronics14152982 - 26 Jul 2025
Viewed by 192
Abstract
The performance of optoelectronic devices is affected by various noise sources. A notable factor is the 4.2% lattice mismatch at the Ge/Si interface, which significantly influences the efficiency of Ge-on-Si photodetectors. These noise sources can be analyzed by examining the impact of the [...] Read more.
The performance of optoelectronic devices is affected by various noise sources. A notable factor is the 4.2% lattice mismatch at the Ge/Si interface, which significantly influences the efficiency of Ge-on-Si photodetectors. These noise sources can be analyzed by examining the impact of the Ge/Si interface and deep traps on dark and photocurrents. This study evaluates the impact of these charge traps on key photodetector performance metrics, including responsivity, photo-to-dark current ratio, noise equivalent power (NEP), and specific detectivity (D*). The trapping effects on charge transport under both forward and reverse bias conditions are monitored through hysteresis analysis. When illuminated with an unmodulated 1550 nm laser, all the key performance metrics exhibit maximum variations at a specific reverse bias. This critical bias marks the transition from saturated to exponential charge transport regimes, where intensified electric fields enhance trap-assisted recombination and thus maximize metric fluctuations. Full article
(This article belongs to the Section Optoelectronics)
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20 pages, 7725 KiB  
Article
Harmonic Distortion Peculiarities of High-Frequency SiGe HBT Power Cells for Radar Front End and Wireless Communication
by Paulius Sakalas and Anindya Mukherjee
Electronics 2025, 14(15), 2984; https://doi.org/10.3390/electronics14152984 - 26 Jul 2025
Viewed by 223
Abstract
High-frequency (h. f.) harmonic distortion (HD) of advanced SiGe heterojunction bipolar transistor (HBT)-based power cells (PwCs), featuring optimized metallization interconnections between individual HBTs, was investigated. Single tone input power (Pin) excitations at 1, 2, 5, and 10 GHz frequencies were [...] Read more.
High-frequency (h. f.) harmonic distortion (HD) of advanced SiGe heterojunction bipolar transistor (HBT)-based power cells (PwCs), featuring optimized metallization interconnections between individual HBTs, was investigated. Single tone input power (Pin) excitations at 1, 2, 5, and 10 GHz frequencies were employed. The output power (Pout) of the fundamental tone and its harmonics were analyzed in both the frequency and time domains. A rapid increase in the third harmonic of Pout was observed at input powers exceeding −8 dBm for a fundamental frequency of 10 GHz in two different PwC technologies. This increase in the third harmonic was analyzed in terms of nonlinear current waveforms, the nonlinearity of the HBT p-n junction diffusion capacitances, substrate current behavior versus Pin, and avalanche multiplication current. To assess the RF power performance of the PwCs, scalar and vectorial load-pull (LP) measurements were conducted and analyzed. Under matched conditions, the SiGe PwCs demonstrated good linearity, particularly at high frequencies. The key power performance of the PwCs was measured and simulated as follows: input power 1 dB compression point (Pin_1dB) of −3 dBm, transducer power gain (GT) of 15 dB, and power added efficiency (PAE) of 50% at 30 GHz. All measured data were corroborated with simulations using the compact model HiCuM L2. Full article
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Article
Beyond the Hype: Stakeholder Perceptions of Nanotechnology and Genetic Engineering for Sustainable Food Production
by Madison D. Horgan, Christopher L. Cummings, Jennifer Kuzma, Michael Dahlstrom, Ilaria Cimadori, Maude Cuchiara, Colin Larter, Nick Loschin and Khara D. Grieger
Sustainability 2025, 17(15), 6795; https://doi.org/10.3390/su17156795 - 25 Jul 2025
Viewed by 433
Abstract
Ensuring sustainable food systems is an urgent global priority as populations grow and environmental pressures mount. Technological innovations such as genetic engineering (GE) and nanotechnology (nano) have been promoted as promising pathways for achieving greater sustainability in agriculture and food production. Yet, the [...] Read more.
Ensuring sustainable food systems is an urgent global priority as populations grow and environmental pressures mount. Technological innovations such as genetic engineering (GE) and nanotechnology (nano) have been promoted as promising pathways for achieving greater sustainability in agriculture and food production. Yet, the sustainability of these technologies is not defined by technical performance alone; it hinges on how they are perceived by key stakeholders and how well they align with broader societal values. This study addresses the critical question of how expert stakeholders evaluate the sustainability of GE and nano-based food and agriculture (agrifood) products. Using a multi-method online platform, we engaged 42 experts across academia, government, industry, and NGOs in the United States to assess six real-world case studies—three using GE and three using nano—across ten different dimensions of sustainability. We show that nano-based products were consistently rated more favorably than their GE counterparts in terms of environmental, economic, and social sustainability, as well as across ethical and societal dimensions. Like prior studies, our results reveal that stakeholders see meaningful distinctions between nanotechnology and biotechnology, likely due to underlying value-based concerns about animal welfare, perceived naturalness, or corporate control of agrifood systems. The fruit coating and flu vaccine—both nano-enabled—received the most positive ratings, while GE mustard greens and salmon were the most polarizing. These results underscore the importance of incorporating stakeholder perspectives in technology assessment and innovation governance. These results also suggest that responsible innovation efforts in agrifood systems should prioritize communication, addressing meaningful societal needs, and the contextual understanding of societal values to build trust and legitimacy. Full article
(This article belongs to the Special Issue Food Science and Engineering for Sustainability)
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