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18 pages, 3266 KB  
Article
Application and Effect of Micropeptide miPEP164c on Flavonoid Pathways and Phenolic Profiles in Grapevine “Vinhão” Cultivar
by Mariana Vale, Arnaud Lanoue, Cécile Abdallah, Hernâni Gerós and Artur Conde
Agronomy 2026, 16(1), 97; https://doi.org/10.3390/agronomy16010097 - 29 Dec 2025
Viewed by 549
Abstract
Climate change increasingly challenges viticulture, demanding innovative and sustainable strategies to preserve grapevine productivity and grape quality. MicroRNA-encoded peptides (miPEPs) have emerged as natural regulators of gene expression, providing a novel mechanism for fine-tuning plant metabolism. Here, we evaluated whether exogenous application of [...] Read more.
Climate change increasingly challenges viticulture, demanding innovative and sustainable strategies to preserve grapevine productivity and grape quality. MicroRNA-encoded peptides (miPEPs) have emerged as natural regulators of gene expression, providing a novel mechanism for fine-tuning plant metabolism. Here, we evaluated whether exogenous application of miPEP164c, previously shown to repress VviMYBPA1 in vitro, can modulate flavonoid pathways in field-grown grapevines (Vitis vinifera L. cv. Vinhão). Grape clusters were sprayed with 1 µM miPEP164c before and during véraison, and molecular, biochemical, and metabolomic analyses were performed at harvest. miPEP164c treatment significantly upregulated pre-miR164c transcripts, leading to post-transcriptional silencing of VviMYBPA1 and strong downregulation of the proanthocyanidin-related genes VviLAR1, VviLAR2, and VviANR. Correspondingly, LAR and ANR activities were reduced by up to 75%, and total proanthocyanidin content decreased by nearly 30%. Metabolomic profiling showed reduced flavan-3-ols and moderate shifts in phenolic acids and stilbenoids, while anthocyanins increased slightly. Overall, miPEP164c reprogrammed flavonoid metabolism under vineyard conditions, selectively lowering tannin biosynthesis without affecting other key phenolics. These findings establish miPEPs as promising biostimulants for precise modulation of grape berry composition, offering new tools for urgently needed sustainable and precision viticulture and improved wine quality under climate change and the increasing environmental challenges it poses. Full article
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27 pages, 5037 KB  
Article
A TCN-BiLSTM and ANR-IEKF Hybrid Framework for Sustained Vehicle Positioning During GNSS Outages
by Senhao Niu, Jie Li, Chenjun Hu, Junlong Li, Debiao Zhang and Kaiqiang Feng
Sensors 2026, 26(1), 152; https://doi.org/10.3390/s26010152 - 25 Dec 2025
Viewed by 396
Abstract
The performance of integrated Global Navigation Satellite System and Inertial Navigation System (GNSS/INS) navigation often declines in complex urban environments due to frequent GNSS signal blockages. This poses a significant challenge for autonomous driving applications that require continuous and reliable positioning. To address [...] Read more.
The performance of integrated Global Navigation Satellite System and Inertial Navigation System (GNSS/INS) navigation often declines in complex urban environments due to frequent GNSS signal blockages. This poses a significant challenge for autonomous driving applications that require continuous and reliable positioning. To address this limitation, this paper presents a novel hybrid framework that combines a deep learning architecture with an adaptive Kalman Filter. At the core of this framework is a Temporal Convolutional Network and Bidirectional Long Short-Term Memory (TCN-BiLSTM) model, which generates accurate pseudo-GNSS measurements from raw INS data during GNSS outages. These measurements are then fused with the INS data stream using an Adaptive Noise-Regulated Iterated Extended Kalman Filter (ANR-IEKF), which enhances robustness by dynamically estimating and adjusting the process and observation noise statistics in real time. The proposed ANR-IEKF + TCN-BiLSTM framework was validated using a real-world vehicle dataset that encompasses both straight-line and turning scenarios. The results demonstrate its superior performance in positioning accuracy and robustness compared to several baseline models, thereby confirming its effectiveness as a reliable solution for maintaining high-precision navigation in GNSS-denied environments. Validated in 70 s GNSS outage environments, our approach enhances positioning accuracy by over 50% against strong deep learning baselines with errors reduced to roughly 3.4 m. Full article
(This article belongs to the Section Navigation and Positioning)
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16 pages, 515 KB  
Article
Lurasidone and Fluvoxamine Combination in Eating Disorders with Comorbid Obsessive–Compulsive Disorder: Preliminary Evidence from an Observational Study
by Francesco Monaco, Annarita Vignapiano, Ernesta Panarello, Stefania Landi, Giuseppe Scarano, Giovanna Celia, Giulio Corrivetti, Luca Steardo and Mauro Cozzolino
Med. Sci. 2026, 14(1), 8; https://doi.org/10.3390/medsci14010008 - 23 Dec 2025
Viewed by 494
Abstract
Background: Anorexia nervosa (AN) and obsessive–compulsive disorder (OCD) share core features of cognitive rigidity, anxiety, and altered reward processing. Pharmacological options remain limited, and combined modulation of serotonergic and dopaminergic systems may provide new therapeutic directions. This naturalistic study explored the combined use [...] Read more.
Background: Anorexia nervosa (AN) and obsessive–compulsive disorder (OCD) share core features of cognitive rigidity, anxiety, and altered reward processing. Pharmacological options remain limited, and combined modulation of serotonergic and dopaminergic systems may provide new therapeutic directions. This naturalistic study explored the combined use of lurasidone and fluvoxamine in individuals with restrictive AN (AN-r) and comorbid OCD. Methods: Forty-five female inpatients with AN-r and OCD were followed for six months. Participants received either lurasidone + fluvoxamine (n = 14) or heterogeneous SSRI/antipsychotic regimens (n = 31). Primary outcomes were the Recovery Assessment Scale (RAS) and Body Uneasiness Test Global Severity Index (BUT-GSI). Secondary outcomes included the Eating Disorder Examination-Questionnaire (EDE-Q) and Eating Disorder Inventory-3 (EDI-3). Bayesian repeated-measures ANOVAs were conducted, reporting BF10, BFInclusion, and P(M│data) values, with multiple imputation applied to manage missing data. Results: Analyses indicated time-related changes across primary outcomes (RAS and BUT-GSI), with moderate-to-strong evidence (BF10 = 4.2–18.6) supporting overall improvement during treatment. Secondary and exploratory measures showed weaker or inconsistent trends (BF10 < 3). No evidence emerged for group-by-time interactions exceeding anecdotal strength. Conclusions: Within the constraints of this small, all-female inpatient cohort, the findings illustrate directional, time-related changes compatible with global rehabilitation effects rather than drug-specific efficacy. The study demonstrates the feasibility—and methodological challenges—of applying Bayesian longitudinal modeling to incomplete clinical datasets. Future randomized or adaptive trials incorporating objective endpoints and data-quality pipelines are warranted to test whether serotonergic–dopaminergic–σ-1 synergy provides genuine clinical benefit in the AN–OCD spectrum. Full article
(This article belongs to the Section Neurosciences)
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15 pages, 2982 KB  
Article
A R3-Type MYB Transcription Factor LrMYB30 Negatively Regulates L. ruthenicum Fruit Coloration
by Yuejie Wang, Tingting Wang, Zhanming Tan and Zixin Mu
Genes 2025, 16(12), 1501; https://doi.org/10.3390/genes16121501 - 15 Dec 2025
Viewed by 373
Abstract
Background: Anthocyanins and proanthocyanidins (PAs), as flavonoid compounds with potent antioxidant activity, exhibit significant health-promoting and medicinal properties. Black wolfberry (Lycium ruthenicum Murr.) is renowned for its exceptional anthocyanin content; however, the regulatory mechanisms of anthocyanin biosynthesis remain poorly understood, limiting its [...] Read more.
Background: Anthocyanins and proanthocyanidins (PAs), as flavonoid compounds with potent antioxidant activity, exhibit significant health-promoting and medicinal properties. Black wolfberry (Lycium ruthenicum Murr.) is renowned for its exceptional anthocyanin content; however, the regulatory mechanisms of anthocyanin biosynthesis remain poorly understood, limiting its biotechnological potential. This study aimed to elucidate the transcriptional regulatory function of LrMYB30 in anthocyanin biosynthesis in black wolfberry. Methods: The regulatory function of LrMYB30 was investigated using virus-induced gene silencing (VIGS), yeast one-hybrid assays, and dual-luciferase reporter assays in black wolfberry. Results: VIGS demonstrated that silencing LrMYB30 promoted anthocyanin accumulation while reducing PA content, establishing that the LrMYB30 transcription factor as a negative regulator of anthocyanin synthesis. Yeast one-hybrid and dual-luciferase reporter assays confirmed that LrMYB30 directly binds to and activates the promoter of LrANR, a key structural gene in PA biosynthesis. In contrast, LrMYB30 neither binds to nor suppresses the promoters of the critical anthocyanin biosynthesis genes LrUF3GT and LrDFR. Conclusions: Thus, LrMYB30 redirects the flavonoid metabolic flux from anthocyanin to PA synthesis through transcriptional activation of LrANR during later fruit development, reducing anthocyanin accumulation and delaying coloration. These findings reveal a novel regulatory mechanism in black wolfberry pigmentation and maturation, providing genetic targets for molecular breeding of high-anthocyanin cultivars. Full article
(This article belongs to the Section Plant Genetics and Genomics)
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19 pages, 247 KB  
Article
Using Methane to Support Renewables for Decarbonisation
by Stephen A. Lloyd and William J. Atteridge
Methane 2025, 4(4), 29; https://doi.org/10.3390/methane4040029 - 12 Dec 2025
Viewed by 344
Abstract
The cost of “carbon net zero by year 2050” for the UK will be high, and this target date can only be achieved if the project is undertaken in a progressive and timely manner; otherwise, costs will escalate. The base power source behind [...] Read more.
The cost of “carbon net zero by year 2050” for the UK will be high, and this target date can only be achieved if the project is undertaken in a progressive and timely manner; otherwise, costs will escalate. The base power source behind the UK approach to “net zero” is nuclear fission electricity power stations, and the ones currently on order are running significantly late. Renewables will provide some supply together with interconnectors, but only approx. twenty percent of the planned wind turbines are in place. The electricity distribution grid must change to satisfy the UK’s planned “electricity-based” future. Energy use for transport is also a significant fraction of total UK energy consumption and we include predictions for their associated emissions. These must be reduced in a progressive and timely fashion. Intermittent support for unreliable renewables is necessary and methods employing both liquid as well as gaseous fuels are suggested. Means to use and upgrade the existing infrastructure are considered, and a few of the basic building blocks of the future are examined regarding their installation without significant interruption to the basic UK economy. ANR/AMR and SMR are included as potential renewables support as well as base load generators, and the approx. quantity of CO2e emissions avoided is estimated. Even though methane is a powerful greenhouse gas, the main support for renewables will be UK natural gas (methane content ~95%), with Avtur/diesel as a recommended reserve. It is suggested that methane has a significant short- to medium-term future as a transition fuel. Full article
(This article belongs to the Special Issue From Methane to Hydrogen: Innovations and Implications)
16 pages, 7438 KB  
Article
Integrated Omics Analysis Revealed the Differential Metabolism of Pigments in Three Varieties of Gastrodia elata Bl
by Xiaohua Li, Huaijing Zhu, Bingbing Zhang and Dahui Liu
Int. J. Mol. Sci. 2025, 26(24), 11839; https://doi.org/10.3390/ijms262411839 - 9 Dec 2025
Viewed by 446
Abstract
Gastrodia elata Blume is a well-known traditional Chinese medicine. The color of flower and flower stalk are important characteristics in the classification of G. elata. However, the mechanisms of pigment formation in different types of G. elata are not yet elucidated. To [...] Read more.
Gastrodia elata Blume is a well-known traditional Chinese medicine. The color of flower and flower stalk are important characteristics in the classification of G. elata. However, the mechanisms of pigment formation in different types of G. elata are not yet elucidated. To understand this, targeted metabolomics as well as transcriptomics analyses were carried out in this study. The differential accumulation and the typical components of pigments in different types of G. elata were elucidated. According to our research, the accumulation of carotenoids rather than anthocyanins likely contributes to the pigment content in G. elata. The different accumulations of carotenoids including violaxanthin, lycopene, α-carotene, and α-cryptoxanthin are the main reasons that contribute to the color differences in the flowers and flower stalks of these three G. elata varieties. Integrated multi-omics analysis enriched 50 and 17 differential genes in the flavonoid–anthocyanin and carotenoid biosynthesis pathways, respectively. Among these, PSY, PDS, CCD, UGT, and ANR were identified as critical genes responsible for the differential pigment accumulation in G. elata varieties, while the MYB TFs were tightly associated with main genes expression and content of carotenoids. Overall, this study enhances the current understanding of pigments’ metabolites profiles and contributes valuable insights into the molecular mechanisms underlying G. elata carotenoid biosynthesis; these findings also provide valuable guidance for future carotenoid biofortification and molecular breeding in G. elata. Full article
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24 pages, 11253 KB  
Article
The Mechanism of TT2-Type MYB Transcription Factor JrMYB1L in Anthocyanin Biosynthesis in ‘Jinghong 1’ Walnuts
by Suilin Zhang, Maofu Li, Wanmei Jin, Yunqi Zhang, Haigen Xu, Hanpin Li, Yonghao Chen, Zhixia Hou and Jianxun Qi
Plants 2025, 14(24), 3727; https://doi.org/10.3390/plants14243727 - 6 Dec 2025
Viewed by 473
Abstract
Red walnuts have been widely studied because of their strong antioxidant activity and ornamental value. However, research on the mechanism of anthocyanin biosynthesis in walnuts remains in the initial stage. The regulatory mechanism of TT2-type R2R3-MYB transcription factors in anthocyanin biosynthesis in walnuts [...] Read more.
Red walnuts have been widely studied because of their strong antioxidant activity and ornamental value. However, research on the mechanism of anthocyanin biosynthesis in walnuts remains in the initial stage. The regulatory mechanism of TT2-type R2R3-MYB transcription factors in anthocyanin biosynthesis in walnuts is also unclear. Therefore, this study used ‘D2-1’ and ‘Jinghong 1’ walnuts as plant materials. The testa of ‘Jinghong 1’ was red, and its anthocyanin content was significantly higher than that of ‘D2-1’, mainly composed of cyanidin-3-O-arabinoside, cyanidin-3-O-galactoside, and cyanidin-3-O-glucoside. Differentially expressed genes between ‘D2-1’ and ‘Jinghong 1’ testa were enriched in phenylpropanoid biosynthesis and flavonoid biosynthesis. Next, this study identified a TT2-type R2R3-MYB transcription factor JrMYB1L, which was involved in regulating the anthocyanin biosynthesis in the testa of ‘Jinghong 1’. The overexpression of JrMYB1L could promote anthocyanin accumulation in walnut leaves and activate the expression of JrCHS, JrCHI, JrF3H, JrDFR, JrANS, JrUFGT, JrLAR, and JrANR. In addition, yeast two-hybrid results proved that JrMYB1L, JrbHLH42, and JrWD40 proteins could interact with each other. The results of yeast one-hybrid and dual-luciferase assays indicated that JrMYB1L could activate the expression of JrCHS and JrUFGT by binding to their promoters. Based on the above results, this study proposed a possible regulatory mechanism. JrMYB1L activated the expression of JrCHS and JrUFGT in the form of JrMYB1L-JrbHLH42-JrWD40 complex, thereby promoting anthocyanin accumulation in the testa of ‘Jinghong 1’. In summary, this study lays a theoretical foundation for revealing the regulatory mechanism of anthocyanin biosynthesis in red walnut and contributes to the breeding of new varieties of red walnuts with more edible and ornamental value. Full article
(This article belongs to the Section Plant Molecular Biology)
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18 pages, 1213 KB  
Article
Contrasting Responses of N2O Mitigation to Different Nitrification Inhibitors in Tea Plantation Soils
by Wei Hua, Siyun Niu, Chenguang Zhao, Jie Wang, Xiangde Yang, Yuanzhi Shi and Kang Ni
Horticulturae 2025, 11(12), 1470; https://doi.org/10.3390/horticulturae11121470 - 5 Dec 2025
Viewed by 404
Abstract
Tea plantations are a hot-spot source of nitrous oxide (N2O) emissions in the agricultural system. Using nitrification inhibitors (NIs) is a promising way to mitigate agricultural N2O emissions and has been widely tested in many croplands. However, the efficiency [...] Read more.
Tea plantations are a hot-spot source of nitrous oxide (N2O) emissions in the agricultural system. Using nitrification inhibitors (NIs) is a promising way to mitigate agricultural N2O emissions and has been widely tested in many croplands. However, the efficiency of different NIs and whether there are soil-specific effects are still unclear in tea plantations with typical acidic soil conditions. This study evaluated the effects of three widely used NIs, i.e., dicyandiamide (DCD), 3,4-dimethylpyrazole phosphate (DMPP), and 2-chloro-6-(trichloromethyl) pyridine (Nitrapyrin), through a lab incubation trial, on the nitrification suppression, N2O emissions, and ammonia-oxidizing microbial communities in two tea plantation soils with contrasting physicochemical properties (pH and texture). During the 50-day incubation, the soil with a higher pH and coarse texture (TA) exhibited a four-times-higher apparent nitrification ratio (ANR) than the more acidic and clay soil (HZ). Nitrification inhibitor addition resulted in about a 60% and 80% reduction in the ANR in HZ and TA soils, respectively. During the entire incubation, ammonium sulfate (N) addition without NIs emitted N2O at 64.1 ± 1.2 and 61.5 ± 0.4 μg N kg−1 (mean ± standard deviation, and the same in the following text) in the HZ and TA soils, respectively. Compared with the N alone, the N2O mitigation efficiency of DCD, DMPP, and Nitrapyrin was 38.3% ± 0.4% (standard deviation), 33.8% ± 0.99%, and 36.5% ± 0.59% in the HZ soil and 94.1% ± 0.39%, 52.8% ± 1.05%, and 95.6% ± 0.65% in the TA soil, respectively. Nitrapyrin more effectively suppressed both ammonia-oxidizing archaeal (AOA) and ammonia-oxidizing bacterial (AOB) abundance, particularly in the acidic soil (HZ), where ammonia-oxidizing archaea dominate nitrification. These results revealed the pivotal role of soil properties in controlling NI efficiency and highlighted Nitrapyrin as a potential superior nitrification inhibitor for N2O mitigation under the tested conditions in this study. Full article
(This article belongs to the Special Issue Sustainable Soil Management for Tea Plantations)
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24 pages, 5577 KB  
Article
A Novel Strategy for Preventing Commutation Failures During Fault Recovery Using PLL Phase Angle Error Compensation
by Junpeng Deng, Liangzhong Yao, Jinglei Deng, Shuai Liang, Rongxiang Yuan, Guoju Zhang and Xuefeng Ge
Electronics 2025, 14(23), 4651; https://doi.org/10.3390/electronics14234651 - 26 Nov 2025
Viewed by 297
Abstract
Existing studies on commutation failure during fault recovery (CFFR) in line-commutated converter high-voltage direct current (LCC-HVDC) systems often neglect the critical influence of phase-locked loop phase tracking error (PLL-PTE) and fail to provide effective control strategies to address this issue. This paper investigates [...] Read more.
Existing studies on commutation failure during fault recovery (CFFR) in line-commutated converter high-voltage direct current (LCC-HVDC) systems often neglect the critical influence of phase-locked loop phase tracking error (PLL-PTE) and fail to provide effective control strategies to address this issue. This paper investigates the influence of PLL-PTE on CFFR through electromagnetic transient simulations based on a modified CIGRE benchmark model. The study reveals that phase angle jump (PAJ) caused by DC power fluctuations (DPF) and AC network reconfigurations (ANR) is the fundamental source of PLL-PTE, which in turn leads to the occurrence of CFFR. To mitigate this, a novel control strategy is proposed that dynamically adjusts the extinction angle based on historical and predicted PAJ data. Simulation results demonstrate that the proposed method effectively suppresses CFFR under various fault conditions, including different fault types, locations, resistances, and initiation times. Compared with existing control schemes, the proposed approach avoids adverse side effects while exhibiting strong robustness and adaptability. The proposed control strategy significantly enhances the stability and reliability of LCC-HVDC systems, offering great potential for practical application in increasingly complex power grid environments. Full article
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24 pages, 12379 KB  
Article
Genome-Wide Identification and Hormone-Induced Expression Analysis of the Anthocyanidin Reductase Gene Family in Sainfoin (Onobrychis viciifolia Scop.)
by Yuqing Hu, Guangzhi Jiang, Jiayin Wang, Huan He, Lele Liu, Pingping Du, Hongbin Li, Fei Wang and Quanliang Xie
Int. J. Mol. Sci. 2025, 26(23), 11256; https://doi.org/10.3390/ijms262311256 - 21 Nov 2025
Viewed by 536
Abstract
Sainfoin (Onobrychis viciifolia Scop.) is an important legume forage. Its anthocyanidin reductase (ANR) catalyzes the conversion of anthocyanins to epicatechins. This conversion reaction is not only a key step in the biosynthesis of proanthocyanidins (PAs) but also directly influences both forage quality [...] Read more.
Sainfoin (Onobrychis viciifolia Scop.) is an important legume forage. Its anthocyanidin reductase (ANR) catalyzes the conversion of anthocyanins to epicatechins. This conversion reaction is not only a key step in the biosynthesis of proanthocyanidins (PAs) but also directly influences both forage quality and stress resistance. Here, we systematically identified 67 ANR gene family members in autotetraploid sainfoin for the first time. Using bioinformatics approaches, we analyzed gene structure, conserved domains, motifs, and cis-regulatory elements of the identified ANR genes. In this study, phylogenetic analysis revealed that the ANRs clustered into 11 distinct clades, with genes within the same clade predominantly originating from closely related species within the same family. Significant collinearity with Arabidopsis thaliana, Glycine max, Cicer arietinum, and Medicago truncatula further revealed the conserved evolutionary path of this gene family. RT-qPCR analysis showed differential expression patterns of OvANRs in root, stem, and leaf tissues. For instance, OvANR19 was significantly induced by abscisic acid (ABA) and methyl jasmonate (MeJA), with its expression upregulated by 79.7-fold and 3.8-fold in roots and by 16.2-fold and 31.3-fold in leaves. Furthermore, subcellular localization analysis confirmed that representative ANR proteins were localized in the cytoplasm. This study lays a foundation for molecular breeding aimed at enhancing stress resistance and forage quality in sainfoin. Full article
(This article belongs to the Section Molecular Biology)
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17 pages, 2106 KB  
Article
Effects of Light Quality on Anthocyanin Biosynthesis and Related Gene Expression in Camellia sinensis ‘Ziyan’
by Wei Li, Xiaoqin Tan, Jiacheng Huang, Wei Chen, Liqiang Tan and Qian Tang
Int. J. Mol. Sci. 2025, 26(22), 10860; https://doi.org/10.3390/ijms262210860 - 9 Nov 2025
Viewed by 879
Abstract
The purple-leaf tea cultivar ‘Ziyan’ is characterized by its high anthocyanin levels, which confer unique visual traits and health benefits. However, the effects of light quality on anthocyanin production remain poorly understood. This study explored the effects of red and blue light on [...] Read more.
The purple-leaf tea cultivar ‘Ziyan’ is characterized by its high anthocyanin levels, which confer unique visual traits and health benefits. However, the effects of light quality on anthocyanin production remain poorly understood. This study explored the effects of red and blue light on anthocyanin biosynthesis in ‘Ziyan’, with white light as the control, using transcriptomic analysis, enzyme assays, and anthocyanin content measurements. The results showed that anthocyanin content increased under blue and red light, with blue light being the most effective, as the total anthocyanin content reached 81.79 mg/100 g FW, a 29.64% increase compared with white light. Delphinidin, cyanidin, and pelargonidin increased by 27.52%, 42.58%, and 102.72%, respectively. Transcriptome analysis showed red and blue light influenced photoreceptors and light signaling components, with decreased COP1 and increased SPA1 expression. Blue light upregulated key anthocyanin structural genes despite downregulating their transcription factors; it enhanced CHS, F3′H, F3′5′H, and ANS activities but decreased LAR and ANR activities, similar to the effect of red light. This research showed that the underlying mechanism may be achieved by coordinating light perception, gene expression, and enzyme activity. This study provides a theoretical basis for optimizing the light quality in purple tea plant cultivation. Full article
(This article belongs to the Special Issue Tea and Health)
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16 pages, 2944 KB  
Article
LcMYB2, a R2R3-MYB Transcription Factor, Regulates Anthocyanin and Proanthocyanidin Biosynthesis in Litchi chinensis Through Interaction with LcbHLH3
by Biao Lai, Li Jiang, Qi Zhu, Chongying Xie, Xiangyu Gong, Guolu He, Shuyi Zhang, Gangjun Luo, Huicong Wang, Lina Du and Guibing Hu
Horticulturae 2025, 11(11), 1309; https://doi.org/10.3390/horticulturae11111309 - 1 Nov 2025
Viewed by 618
Abstract
Litchi (Litchi chinensis Sonn.) is a popular subtropical fruit with a red pericarp that is primarily determined by the accumulation of anthocyanins. The peel color and fruit quality are also influenced by proanthocyanins (PAs), which play roles in fruit development and postharvest [...] Read more.
Litchi (Litchi chinensis Sonn.) is a popular subtropical fruit with a red pericarp that is primarily determined by the accumulation of anthocyanins. The peel color and fruit quality are also influenced by proanthocyanins (PAs), which play roles in fruit development and postharvest quality. In this study, we identified LcMYB2 as a key regulator of both anthocyanin and PA biosynthesis in litchi. Phylogenetic analysis revealed that LcMYB2 belongs to the VvMYB5 subclade. Expression analysis showed that LcMYB2 is highly expressed in the early stages of fruit development. Its expression pattern was consistent with that of LcLAR and LcANR, two key genes in the PA biosynthetic pathway. Subcellular localization and protein–protein interaction assays confirmed that LcMYB2 localizes to the nucleus and interacts with LcbHLH3. Dual-luciferase reporter assays demonstrated that the LcMYB2-LcbHLH3 complex activates the promoters of LcLAR and LcANR, supporting its role in regulating PA biosynthesis. Furthermore, overexpression of LcMYB2 in tobacco resulted in the synthesis of anthocyanins and PAs in the flower, indicating that LcMYB2 can regulate anthocyanin and PA biosynthesis. Additionally, transgenic tobacco plants with LcMYB2 overexpression exhibited delayed anther dehiscence, suggesting a broader role in plant development. These findings highlight the multifunctional nature of LcMYB2 in regulating both anthocyanin and PA biosynthesis, as well as its involvement in reproductive development. Full article
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18 pages, 4620 KB  
Article
Integrated Analysis of Metabolome and Transcriptome Provides Insights into Flavonoid Biosynthesis of Pear Flesh (Pyrus pyrifolia)
by Jun Su, Yanping Liang, Yingyun He, Wen Zhang, Jingyuan Zhou, Lina Wang and Songling Bai
Foods 2025, 14(21), 3716; https://doi.org/10.3390/foods14213716 - 30 Oct 2025
Cited by 1 | Viewed by 572
Abstract
The flavonoids in the flesh significantly impact fruit quality and nutritional value. In this study, the flesh of ‘Heqingxiaoshali’ (HF) and ‘Lunanhuangpingli’ (LF) was analyzed by non-targeted metabolomics and transcriptomics. The results showed that the contents of reducing sugars, titratable acids and total [...] Read more.
The flavonoids in the flesh significantly impact fruit quality and nutritional value. In this study, the flesh of ‘Heqingxiaoshali’ (HF) and ‘Lunanhuangpingli’ (LF) was analyzed by non-targeted metabolomics and transcriptomics. The results showed that the contents of reducing sugars, titratable acids and total flavonoids in HF flesh were significantly higher than those in LF. Metabolomics analysis revealed significant differences in lipids, organic acids, phenylpropanoids, and polyketides between HF and LF at each developmental stage, with Trilobatin, Cratenacin, and Betuletol 3-galactoside showing significant differences across all stages, and proanthocyanidins being the most abundant flavonoids in HF at harvest. Transcriptome analysis revealed significant differences in genes related to flavonoid biosynthesis between the two varieties, with differentially expressed genes enriched in the “phenylpropanoid biosynthesis” and “flavonoid biosynthesis” pathways across at least four developmental stages. WGCNA suggested that differences in the flavonoid accumulation were closely related to seven structural genes (PAL, CHI, FHT, FLS, DFR, ANS and ANR) and a transcription factor (MYB4), as well as genes related to auxin response and jasmonic acid metabolism. This study provides new insights into the molecular mechanisms of flavonoid accumulation in the fruit flesh of pears and offers a theoretical basis for pear fruit quality improvement. Full article
(This article belongs to the Section Foodomics)
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23 pages, 12455 KB  
Article
The VvWRKY26-MBW Complex Induced by Salicylic Acid Promotes the Accumulation of Proanthocyanidins in Grape
by Pengfei Zhang, Yuyu Feng, Xiaoran Du, Zhilong Hao, Jinjun Liang and Pengfei Wen
Plants 2025, 14(21), 3272; https://doi.org/10.3390/plants14213272 - 26 Oct 2025
Cited by 1 | Viewed by 698
Abstract
Proanthocyanidins (PAs) are a significant class of polyphenolic compounds found in grapes, playing important roles in human health and plant stress resistance. Previous studies have shown that the VvMYBPA1/PA2-VvWDR1-VvMYC2 (MBW) complex can regulate the biosynthesis of proanthocyanidins, and some studies have shown that [...] Read more.
Proanthocyanidins (PAs) are a significant class of polyphenolic compounds found in grapes, playing important roles in human health and plant stress resistance. Previous studies have shown that the VvMYBPA1/PA2-VvWDR1-VvMYC2 (MBW) complex can regulate the biosynthesis of proanthocyanidins, and some studies have shown that the homologous genes of VvWRKY26 are involved in the biosynthesis of proanthocyanins and anthocyanins in Arabidopsis thaliana and petunias, but the molecular mechanism of VvWRKY26 in regulating the biosynthesis of proanthocyanins in grapes is still unclear. In this study, we found that the content of proanthocyanidins and the expression of related structural genes were significantly increased by salicylic acid (SA) incubation in grapes during the color transition period. Overexpression of VvWRKY26 in grapevine healing tissues revealed that overexpression of VvWRKY26 significantly promoted the accumulation of proanthocyanidins and up-regulation of related structural genes when compared with the empty vector. Further investigation into the interaction mechanisms through yeast two-hybrid and bimolecular fluorescence complementation assays revealed that VvWRKY26 can interact with VvMYBPA1/PA2, VvMYC2, and VvWDR1 to form VvMYBPA1/PA2-VvWDR1-VvMYC2-VvWRKY26 (W-MBW) complex. Through yeast one-hybrid assays and dual-luciferase reporter analysis, it was confirmed that VvWRKY26 could bind to the promoters of VvANR and VvLAR2 and activate their activity. Finally, through the co-overexpression of VvWRKY26 and MBW complex, it was discovered that the promoting activity of VvANR and VvLAR2, as well as the biosynthesis of PAs, were significantly enhanced, which was much higher than the effect of the MBW complex alone, while the opposite occurred after co-interference. In conclusion, this study explored the role of VvWRKY26 in the biosynthesis of proanthocyanidins in grapes after the interaction with the MBW complex to form W-MBW under SA incubation, providing a new regulatory mechanism for the biosynthesis of proanthocyanidins in grapes. Full article
(This article belongs to the Section Plant Physiology and Metabolism)
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20 pages, 15206 KB  
Project Report
Vaulted Harmonies: Archaeoacoustic Concert in Notre-Dame de Paris
by David Poirier-Quinot, Jean-Marc Lyzwa, Jérôme Mouscadet and Brian F. G. Katz
Acoustics 2025, 7(4), 66; https://doi.org/10.3390/acoustics7040066 - 15 Oct 2025
Cited by 2 | Viewed by 1657
Abstract
This paper presents Vaulted Harmonies, a 66-min animated feature film created as part of the scientific outreach effort of the Past Has Ears at Notre-Dame project (ANR-PHEND). The project investigates the historical acoustics of Notre-Dame de Paris and their influence on music over [...] Read more.
This paper presents Vaulted Harmonies, a 66-min animated feature film created as part of the scientific outreach effort of the Past Has Ears at Notre-Dame project (ANR-PHEND). The project investigates the historical acoustics of Notre-Dame de Paris and their influence on music over the centuries. The film is structured around eleven musical pieces spanning the 12th to 20th centuries, each chosen for its relevance to the cathedral’s history and musical heritage. Details include how each piece was recorded and auralised using a calibrated geometric acoustic model that reflects the acoustics of the corresponding historical period. Further details describe the creation of the CGI renderings of Notre-Dame, which feature animated musicians synchronised with the music they perform, enhancing the immersive quality of the experience. These musical performances are interwoven with short documentary-style segments that provide historical and musicological context. The film adopts a first-person perspective in which the acoustics and visuals dynamically follow the camera’s movement, offering a virtual reality-like experience in a cinematic format. Vaulted Harmonies thus functions both as an engaging archaeoacoustic outreach project and as a standalone virtual concert rooted in historically informed performance and production. Full article
(This article belongs to the Special Issue The Past Has Ears: Archaeoacoustics and Acoustic Heritage)
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