-
Oral Vaccination with Attenuated Salmonella Expressing Viral M25 Protein Effectively Protects Mice Against Murine Cytomegalovirus Infection
-
Borrelia burgdorferi Strain-Specific Differences in Mouse Infectivity and Pathology
-
Why Are Cytomegalovirus-Encoded G-Protein-Coupled Receptors Essential for Infection but Only Variably Conserved?
Journal Description
Pathogens
Pathogens
is an international, peer-reviewed, open access journal on pathogens and pathogen-host interactions published monthly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, SCIE (Web of Science), PubMed, MEDLINE, PMC, Embase, PubAg, CaPlus / SciFinder, AGRIS, and other databases.
- Journal Rank: JCR - Q2 (Microbiology) / CiteScore - Q1 (Infectious Diseases)
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 13.5 days after submission; acceptance to publication is undertaken in 2.6 days (median values for papers published in this journal in the first half of 2025).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Companion journals for Pathogens include: Parasitologia and Bacteria.
Impact Factor:
3.3 (2024);
5-Year Impact Factor:
3.6 (2024)
Latest Articles
Evaluating Entomopathogenic Nematodes as Biocontrol Agents Against Two Major Cockroach Species, Blattella germanica and Periplaneta americana, in Antalya, Türkiye
Pathogens 2025, 14(7), 655; https://doi.org/10.3390/pathogens14070655 - 1 Jul 2025
Abstract
►
Show Figures
Cockroaches, particularly the German cockroach (Blattella germanica Linnaeus, Blattodea: Ectobiidae) and the American cockroach (Periplaneta americana (Linnaeus), Blattodea: Blattidae), are major public health pests due to their ability to transmit pathogens and develop resistance to chemical insecticides, including synthetic pyrethroids, which
[...] Read more.
Cockroaches, particularly the German cockroach (Blattella germanica Linnaeus, Blattodea: Ectobiidae) and the American cockroach (Periplaneta americana (Linnaeus), Blattodea: Blattidae), are major public health pests due to their ability to transmit pathogens and develop resistance to chemical insecticides, including synthetic pyrethroids, which are widely used worldwide. Given the increasing resistance, entomopathogenic nematodes (EPNs) have emerged as a potential biological control alternative. This study evaluates the efficacy of three EPN species, Steinernema carpocapsae (Weiser), S. feltiae (Filipjev), and Heterorhabditis bacteriophora Poinar, against B. germanica and P. americana collected from different regions of Antalya, Türkiye. Laboratory bioassays were conducted under controlled conditions, testing five EPN concentrations (100, 250, 500, 750, and 1000 IJs/mL). The results showed that S. carpocapsae was the most effective, causing mortality rates of 46.7% to 100% in adult German cockroaches and 20% to 66.7% in nymphs, while S. feltiae and H. bacteriophora exhibited lower efficacy. American cockroaches showed higher resistance, with S. carpocapsae achieving a maximum mortality of 33.3% at the highest concentration, whereas S. feltiae and H. bacteriophora had no significant lethal effect. These findings suggest that S. carpocapsae could be a promising biological control agent for B. germanica, particularly in pyrethroid-resistant populations.
Full article
Open AccessReview
Applying CRISPR Technologies for the Treatment of Human Herpesvirus Infections: A Scoping Review
by
Chloë Hanssens and Jolien Van Cleemput
Pathogens 2025, 14(7), 654; https://doi.org/10.3390/pathogens14070654 - 1 Jul 2025
Abstract
Background: Human herpesviruses are double-stranded DNA viruses of which eight types have been identified at present. Herpesvirus infection comprises an active lytic phase and a lifelong latency phase with the possibility of reactivation. These infections are highly prevalent worldwide and can lead to
[...] Read more.
Background: Human herpesviruses are double-stranded DNA viruses of which eight types have been identified at present. Herpesvirus infection comprises an active lytic phase and a lifelong latency phase with the possibility of reactivation. These infections are highly prevalent worldwide and can lead to a broad spectrum of clinical manifestations, ranging from mild symptoms to severe disease, particularly in immunocompromised individuals. Clustered regularly interspaced palindromic repeats (CRISPR)-based therapy is an interesting alternative to current antiviral drugs, which fail to cure latent infections and are increasingly challenged by viral resistance. Objective: This scoping review aimed to summarize the current state of CRISPR-based antiviral strategies against herpesvirus infections, highlighting the underlying mechanisms, study design and outcomes, and challenges for clinical implementation. Design: A literature search was conducted in the databases PubMed and Web of Science, using both a general and an individual approach for each herpesvirus. Results: This scoping review identified five main mechanisms of CRISPR-based antiviral therapy against herpesvirus infections in vitro and/or in vivo. First, CRISPR systems can inhibit the active lytic replication cycle upon targeting viral lytic genes or host genes. Second, CRISPR technologies can remove latent viral genomes from infected cells by targeting viral genes essential for latency maintenance or destabilizing the viral genome. Third, reactivation of multiple latent herpesvirus infections can be inhibited by CRISPR-Cas-mediated editing of lytic viral genes, preventing a flare-up of clinical symptoms and reducing the risk of viral transmission. Fourth, CRISPR systems can purposefully induce viral reactivation to enhance recognition by the host immune system or improve the efficacy of existing antiviral therapies. Fifth, CRISPR technology can be applied to develop or enhance the efficiency of cellular immunotherapy. Conclusions: Multiple studies demonstrate the potential of CRISPR-based antiviral strategies to target herpesvirus infections through various mechanisms in vitro and in vivo. However, aspects regarding the delivery and biosafety of CRISPR systems, along with the time window for treatment, require further investigation before broad clinical implementation can be realized.
Full article
(This article belongs to the Special Issue Herpesvirus Latency and Reactivation)
►▼
Show Figures

Figure 1
Open AccessCorrection
Correction: Ortega-Carballo et al. Effect of Stevioside (Stevia rebaudiana) on Entamoeba histolytica Trophozoites. Pathogens 2024, 13, 373
by
Karla Jocelyn Ortega-Carballo, Karla Montserrat Gil-Becerril, Karla Berenice Acosta-Virgen, Sael Casas-Grajales, Pablo Muriel and Víctor Tsutsumi
Pathogens 2025, 14(7), 653; https://doi.org/10.3390/pathogens14070653 - 1 Jul 2025
Abstract
►▼
Show Figures
In the original publication [...]
Full article

Figure 6
Open AccessArticle
First Molecular Evidence of Ixodiphagus hookeri (Hymenoptera: Encyrtidae) in Ixodes ricinus and Haemaphysalis concinna (Acari: Ixodida) Ticks from Inland and Coastal Areas of the Balkan Peninsula
by
Veronika Blažeková, Michal Stanko, Dana Zubriková, Lucia Vargová, Klaudia Mária Švirlochová and Bronislava Víchová
Pathogens 2025, 14(7), 652; https://doi.org/10.3390/pathogens14070652 - 1 Jul 2025
Abstract
Ixodiphagus hookeri (Howard, 1907) (Hymenoptera: Encyrtidae), a hyperparasitic wasp that parasitizes hard ticks, has been documented in various parts of Europe; however, data on its presence in southeastern regions has been lacking. This study provides the first molecular evidence of I. hookeri in
[...] Read more.
Ixodiphagus hookeri (Howard, 1907) (Hymenoptera: Encyrtidae), a hyperparasitic wasp that parasitizes hard ticks, has been documented in various parts of Europe; however, data on its presence in southeastern regions has been lacking. This study provides the first molecular evidence of I. hookeri in ticks from the coastal areas of the Balkan Peninsula, specifically Croatia and Bulgaria. A total of 1043 questing ticks were collected between 2011 and 2013 across 15 locations. Molecular screening revealed I. hookeri DNA in Ixodes ricinus (Linnaeus, 1758) (Acari: Ixodidae) nymphs from inland Croatia (overall prevalence: 18.72%) and in Haemaphysalis concinna (Koch, 1844) (Acari: Ixodidae) nymphs and larvae from coastal Bulgaria (prevalence: 17.2%). All I. hookeri-positive samples were co-infected with Wolbachia spp. (Rickettsiales: Anaplasmataceae). This detection marks the southernmost record of I. hookeri in Central Europe, expanding its known range to the Balkan Peninsula and supporting its relevance as a potential natural enemy in integrated tick management strategies.
Full article
(This article belongs to the Special Issue Ticks and Tick-Borne Pathogens in the Balkans)
►▼
Show Figures

Figure 1
Open AccessCase Report
Molecular and Microscopic Challenges in Detecting Plasmodium cynomolgi Co-Infections with Plasmodium vivax: A Case Report
by
Mohd Adilin Yaacob, Raden Shamilah Radin Hisam, Nor Parina Ismail, Noor Azian Md Yusuf, Jose Miguel Rubio Muñoz, Suhana Hashim and Tam Jenn Zhueng
Pathogens 2025, 14(7), 651; https://doi.org/10.3390/pathogens14070651 - 30 Jun 2025
Abstract
The risk of non-human primate (NHP) malaria transmission to humans is increasing, with Plasmodium knowlesi and Plasmodium cynomolgi emerging as significant zoonotic threats, particularly in Malaysia. While P. knowlesi is well-documented, P. cynomolgi infections in humans remain underreported, largely due to diagnostic challenges.
[...] Read more.
The risk of non-human primate (NHP) malaria transmission to humans is increasing, with Plasmodium knowlesi and Plasmodium cynomolgi emerging as significant zoonotic threats, particularly in Malaysia. While P. knowlesi is well-documented, P. cynomolgi infections in humans remain underreported, largely due to diagnostic challenges. Routine microscopy and standard molecular diagnostic tools often misdiagnose P. cynomolgi infections as P. vivax due to morphological similarities and genetic homology. We report a new case of a human P. cynomolgi infection misdiagnosed as Plasmodium vivax in a 32-year-old male with no prior malaria history or travel to endemic countries. The initial diagnoses made by the microscopy and qPCR conducted by the Kota Bharu Public Health Laboratory in Kelantan identified the infection as P. vivax. However, cross-examination by the Institute for Medical Research (IMR) revealed the presence of mixed-species infection, prompting further analysis. The real-time PCR and sequencing performed at MAPELAB, Spain, confirmed the co-infection of P. vivax and P. cynomolgi. This case highlights the diagnostic limitations in detecting P. cynomolgi, which shares high genetic similarity with P. vivax, leading to potential cross-reactivity and diagnostic inaccuracies. As P. cynomolgi emerges as the second zoonotic malaria species after P. knowlesi capable of infecting humans in Southeast Asia, improved diagnostic methods are urgently needed. Enhanced molecular diagnostics and comprehensive epidemiological studies are essential to elucidate transmission dynamics, assess public health implications, and inform effective malaria control strategies.
Full article
(This article belongs to the Special Issue Parasites and Zoonotic Diseases)
►▼
Show Figures

Figure 1
Open AccessArticle
Tissue Distribution and Abundance of the Parasitic Dinoflagellate Hematodinium perezi in Naturally Infected Portunus trituberculatus
by
Ju Zhang, Meng Li, Qian Huang, Lijun Hu, Qi Xue, Jiayi Wang and Caiwen Li
Pathogens 2025, 14(7), 650; https://doi.org/10.3390/pathogens14070650 - 30 Jun 2025
Abstract
►▼
Show Figures
The parasitic dinoflagellate Hematodinium is an infectious pathogen that causes severe enzootic in numerous economically important marine crustaceans worldwide. Previous research has focused on investigating the identification and life stages of Hematodinium parasites, while the parasite abundance and tissue proliferation process of Hematodinium
[...] Read more.
The parasitic dinoflagellate Hematodinium is an infectious pathogen that causes severe enzootic in numerous economically important marine crustaceans worldwide. Previous research has focused on investigating the identification and life stages of Hematodinium parasites, while the parasite abundance and tissue proliferation process of Hematodinium in naturally infected crustacean hosts need to be further studied. In the present study, the tissue tropisms and intensity of H. perezi were investigated in the naturally infected Chinese swimming crabs Portunus trituberculatus by both the qualitative (hemolymph assay, histology) and quantitative analysis (cell count, quantitative PCR). The results showed that in P. trituberculatus with infection level I (4 ± 2 parasites in 200× microscopic field), filamentous trophonts were observed in the hemolymph and stomach tissues, with the average parasite number and ITS 1 copy number of H. perezi quantitatively detected in hemolymph (1.0 × 102 parasites/mL) and stomach tissues (1.7 × 103 cells/g), respectively. H. perezi trophonts were observed in the hemolymph (4.3 × 104 parasites/mL) and exhibited broad distribution in multiple tissues with its highest abundance of H. perezi in pereiopod muscles (1.1 × 104 cells/g) followed by that in stomach (4.8 × 103 cells/g) in P. trituberculatus with infection level II (80 ± 10 parasites in 200× microscopic field). In P. trituberculatus with infection level III (200 ± 35 parasites in 200× microscopic field), a high abundance of H. perezi sporoblasts was found in the hemolymph (3.1 × 107 parasites/mL) and all of the other examined tissues, with its highest abundance detected in pereiopod muscles (3.5 × 104 cells/g). In addition, the number of host’s hemocytes was significantly decreased during the Hematodinium infection. This study provides a comprehensive quantitative characterization of the tissue distribution and abundance of H. perezi in its natural crab host which will contribute to better understanding of the crustacean host–Hematodinium interactions.
Full article

Graphical abstract
Open AccessArticle
Anthelmintic Resistance in Livestock Farming: Challenges and Perceptions of Farmers and Veterinarians
by
Naida Kapo, Adis Softić, Teufik Goletić, Šejla Goletić, Aleksandar Cvetkovikj and Jasmin Omeragić
Pathogens 2025, 14(7), 649; https://doi.org/10.3390/pathogens14070649 - 30 Jun 2025
Abstract
Anthelmintic resistance in livestock is a growing concern worldwide, with significant implications for animal health and agricultural productivity. This study explores the perceptions of veterinarians and farmers in Bosnia and Herzegovina regarding the factors contributing to anthelmintic resistance in Haemonchus contortus nematodes. Data
[...] Read more.
Anthelmintic resistance in livestock is a growing concern worldwide, with significant implications for animal health and agricultural productivity. This study explores the perceptions of veterinarians and farmers in Bosnia and Herzegovina regarding the factors contributing to anthelmintic resistance in Haemonchus contortus nematodes. Data were collected through structured questionnaires completed by 106 veterinarians and 188 farmers in 2022 and 2023. The analysis focused on self-reported therapeutic practices, farm management and environmental variables. Logistic regression, including Firth’s penalized approach, was used to assess associations between these perceived factors and the reported occurrence of resistance. Notably, combination anthelmintic treatments were perceived as a significant risk factor (OR > 49.3), while higher altitude was seen as potentially protective (OR = 0.10). Routine prophylactic deworming was associated with an increased likelihood of perceived resistance (OR = 173.7), whereas staying informed about newly registered products was perceived as protective (OR = 0.34). Although the findings are based on the self-reported perceptions and practices of veterinarians and farmers, they align with globally recognized trends and offer the first structured insights into factors perceived to contribute to anthelmintic resistance in Bosnia and Herzegovina. This study underscores the importance of awareness and responsible anthelmintic use and the need for improved diagnostics and ongoing education to combat anthelmintic resistance.
Full article
(This article belongs to the Special Issue Pathogenesis, Epidemiology, and Drug Resistance in Nematode Parasites)
Open AccessArticle
Antibiotic Resistance, Virulence Genes, and Molecular Diversity of Clinical Klebsiella pneumoniae Isolates from Patients of District Hospital in Central Poland
by
Barbara Kot, Małgorzata Witeska, Piotr Szweda, Małgorzata Piechota, Elżbieta Kondera, Elżbieta Horoszewicz, Izabela Balak, Ahmer Bin Hafeez and Alicja Synowiec
Pathogens 2025, 14(7), 648; https://doi.org/10.3390/pathogens14070648 - 30 Jun 2025
Abstract
In hospital environments, pathogenic bacteria spread easily and acquire virulence and antibiotic resistance genes. The aim of the study was an evaluation of the genetic diversity of 109 K. pneumoniae isolates recovered from patients of a district hospital in central Poland. The frequencies
[...] Read more.
In hospital environments, pathogenic bacteria spread easily and acquire virulence and antibiotic resistance genes. The aim of the study was an evaluation of the genetic diversity of 109 K. pneumoniae isolates recovered from patients of a district hospital in central Poland. The frequencies of genes coding for β-lactamases, efflux pumps, and virulence factors were determined. Genotyping of the isolates was performed with ERIC (Enterobacterial Repetitive Intergenic Consensus) and REP (Repetitive Element Sequence Based) PCR techniques, with 21 and 19 genotypes being identified, respectively. The blaSHV-1 (92.7%), blaCTX-M group 1 (83.5%), blaTEM-1 (28.4%), blaNDM-1 (16.5%), blaVEB-1 (11.0%), blaCTX-M group 9 (3.7%), blaKPC (1.8%), blaIMP, blaOXA-48, blaCTX-M group 2, blaCTX-M groups 8, and 25/26 (0% each) and efflux pumps: AcrAB (100%), tolC (93.6%), and mdtk (60.5%), and virulence genes coding: urease subunit ureA (94.5%) endotoxins wabG (92.7%) and uge (64.2%), and siderophore iucB (3.7%) were detected. The blaSHV-1, blaCTX-M group1, mdtk, tolC, AcrAB (16.5%); blaSHV-1, blaCTX-M group1, tolC, AcrAB (15.6%), and blaSHV-1, blaCTX-M group1, blaNDM-1, mdtk, tolC, AcrAB (11.9%) were the most common resistance patterns. The distribution of resistance and virulence genes varied more between hospital wards than between different clinical materials. Hospital's antibiotic-resistant and virulent K. pneumoniae, able to spread among humans, animals, and in the environment, pose a significant threat to public health.
Full article
(This article belongs to the Section Bacterial Pathogens)
Open AccessArticle
Projected Distribution and Dispersal Patterns of Potential Distribution Fasciola hepatica and Its Key Intermediate Host Radix spp. in Qinghai-Tibet Plateau, China, Under Plateau Climatic Conditions
by
Luyao Xu, Yunhai Guo, Zengkui Li, Mingjia Guo, Ming Kang, Daoxin Liu, Limin Yang, Zhongqiu Li, Panpan Wang, Wenhui Luo and Ying Li
Pathogens 2025, 14(7), 647; https://doi.org/10.3390/pathogens14070647 - 30 Jun 2025
Abstract
(1) Background: As a prominent zoonotic parasitic disease, fascioliasis threatens the sustainable development of animal husbandry and public health. Current research focuses mainly on individual species (parasite or intermediate host), neglecting systematic evaluation of the transmission chain and exposure risks to animal husbandry.
[...] Read more.
(1) Background: As a prominent zoonotic parasitic disease, fascioliasis threatens the sustainable development of animal husbandry and public health. Current research focuses mainly on individual species (parasite or intermediate host), neglecting systematic evaluation of the transmission chain and exposure risks to animal husbandry. Thus, comprehensive studies are urgently needed, especially in the ecologically fragile alpine region of the Qinghai-Tibet Plateau; (2) Methods: Distribution data of Radix spp. and Fasciola hepatica in the Qinghai-Tibet Plateau and adjacent areas were gathered to establish a potential distribution model, which was overlaid on a map of livestock farming in the region; (3) Results: The key environmental factors influencing Radix spp. distribution were temperature seasonality (21.4%), elevation (16.4%), and mean temperature of the driest quarter (14.7%). For F. hepatica, the main factors were elevation (41.3%), human footprint index (30.5%), and Precipitation of the driest month (12.1%), with all AUC values exceeding 0.9. Both species exhibited extensive suitable habitats in Qinghai and Tibet, with higher F. hepatica transmission risk in Qinghai than Tibet; (4) Conclusions: The significant transmission risk and its impacts on the livestock industry in the Qinghai-Tibet Plateau highlight the need for proactive prevention and control measures. This study provides a scientific foundation for targeted alpine diseases control, establishes an interdisciplinary risk assessment framework, fills gaps in high-altitude eco-epidemiology, and offers insights for ecological conservation of the plateau.
Full article
(This article belongs to the Section Parasitic Pathogens)
►▼
Show Figures

Graphical abstract
Open AccessArticle
Growth Inhibition and Additive Effect to Antimalarial Drugs of Brucea javanica Extracts on Asexual Blood-Stage Plasmodium falciparum
by
Niwat Kangwanrangsan, Gamolthip Niramolyanun, Chonnipa Praikongkatham, Pathanin Chantree, Pongsakorn Martviset and Viriya Pankao
Pathogens 2025, 14(7), 646; https://doi.org/10.3390/pathogens14070646 - 30 Jun 2025
Abstract
Malaria is a parasitic infectious disease that is endemic in many tropical countries. Even though several effective antimalarial agents have been implemented, treatment failure still occurs, and malaria continues to cause neurological complications and death, particularly in severe or drug-resistant cases. Hence, novel
[...] Read more.
Malaria is a parasitic infectious disease that is endemic in many tropical countries. Even though several effective antimalarial agents have been implemented, treatment failure still occurs, and malaria continues to cause neurological complications and death, particularly in severe or drug-resistant cases. Hence, novel therapeutic agents with distinct mechanisms of action, as well as alternative chemical compounds that can overcome resistance, are still needed to improve malaria therapy. This study aimed to investigate the antimalarial activities of Brucea javanica, a tropical plant extracts against Plasmodium falciparum, the major species associated with severe malaria. In this study, malaria parasites were treated with plant extracts using single and co-incubation methods, along with artesunate and chloroquine, and their inhibitory effect on parasite development was determined by microscopy. The results show that all tested doses of the extracts that effectively inhibited malaria parasites did not cause hemolysis of red blood cells (RBCs). The root extract (RE) and fruit extract (FE) inhibited parasite growth at IC50 values of 0.41 ± 1.14 µg/mL and 0.26 ± 1.15 µg/mL, respectively. These plant extracts significantly interrupted malaria development at the ring stage, as presented by a reduction in the conversion rate to trophozoites and schizonts. The defective parasites treated with plant extracts were characterized by nuclear clumping, leading to pyknotic cell death. Moreover, RE and FW extracts elicited an additive effect with artesunate and chloroquine, significantly reducing IC90 levels for the inhibition of parasite development. In conclusion, B. javanica extracts inhibited the asexual blood-stage development of malaria parasites. They distinctively show the additive effects of ATS and CRQ, elucidating their potential for further studies on novel formulas of antimalarial drug regimens.
Full article
(This article belongs to the Section Parasitic Pathogens)
Open AccessReview
Mass Spectrometry Imaging: Revolutionizing Molecular Insights in Infectious Diseases Research
by
Minmin Zhang, Xiao Wang, Xiaoling Su, Aidiya Yimamu, Lanjuan Li and Zeyu Sun
Pathogens 2025, 14(7), 645; https://doi.org/10.3390/pathogens14070645 - 30 Jun 2025
Abstract
►▼
Show Figures
Infectious diseases remain a leading cause of mortality worldwide. The pathogenesis that comprises infection, focal inflammation, and immuno-response, typically occurs in one or multiple organs or tissues. Analysis of the molecular composition of affected tissues with their spatial context is pivotal to elucidate
[...] Read more.
Infectious diseases remain a leading cause of mortality worldwide. The pathogenesis that comprises infection, focal inflammation, and immuno-response, typically occurs in one or multiple organs or tissues. Analysis of the molecular composition of affected tissues with their spatial context is pivotal to elucidate the underlying disease mechanisms and to develop accurate diagnostic strategies. In recent years, mass spectrometry imaging (MSI) technology has achieved significant advancements and has emerged as an powerful tool for tissue-based molecular exploration with high molecular specificity and spatial resolution. Although MSI has been rapidly adopted in numerous branches of biomedical research, its application in the field of infectious diseases research is still in its early stages. With this in mind, this review aims to familiarize infectious disease researchers with the advantages and diverse applications of MSI. Additionally, we delineate several existing technical challenges, application pitfalls, and the potential solutions to overcome these challenges.
Full article

Figure 1
Open AccessArticle
Gram-Negative Microbiota Derived from Trout Fished in Slovakian Water Sources and Their Relationship to Postbiotics
by
Andrea Lauková, Anna Kandričáková, Jana Ščerbová, Monika Pogány Simonová and Rudolf Žitňan
Pathogens 2025, 14(7), 644; https://doi.org/10.3390/pathogens14070644 - 28 Jun 2025
Abstract
Regarding the trout microbiota, most information is focused on lactic acid bacteria, which can show beneficial properties. However, in trout farming, mostly pathogenic Gram-positive species were reported, such as Staphylococcus aureus, Listeria monocytogenes, and/or Clostridium spp. In this study, free-living trout
[...] Read more.
Regarding the trout microbiota, most information is focused on lactic acid bacteria, which can show beneficial properties. However, in trout farming, mostly pathogenic Gram-positive species were reported, such as Staphylococcus aureus, Listeria monocytogenes, and/or Clostridium spp. In this study, free-living trout were analyzed for Gram-negative microbiota that can cause loss as disease-stimulating agents. Bacteriocin postbiotics should be one of the approaches used to eliminate these agents. In total, 21 strains of different species isolated from the intestinal tract of 50 trout in Slovakia (Salmo trutta and Salmo gairdnerii) were taxonomically allotted into 13 species and 9 genera. This method showed variability in microbiota identified using MALDI-TOF mass spectrometry with the following species: Acinetobacter calcoaceticus, Citrobacter gillenii, Citrobacter freundii, Escherichia coli, Hafnia alvei, Kluyvera cryocrescens, K. intermedia, Leclercia adecarboxylata, Raoultella ornithinolytica, Pseudomonas fragi, Ps. putida, Ps. lundensis, Ps. teatrolens, and Serratia fonticola. Most strains were susceptible to the antibiotics used, reaching inhibitory zones up to 29 mm. On the other hand, 3 out of 21 strains (14%) were susceptible to nine enterocins- postbiotics (Hafnia alvei Hal281, Pseudomonas putida Pp391, and Ps. fragi Pf 284), with inhibitory activity in the range of 100–6400 AU/mL.
Full article
(This article belongs to the Section Bacterial Pathogens)
Open AccessArticle
Presentation and Clinical Course of Leptospirosis in a Referral Hospital in Far North Queensland, Tropical Australia
by
Hayley Stratton, Patrick Rosengren, Toni Kinneally, Laura Prideaux, Simon Smith and Josh Hanson
Pathogens 2025, 14(7), 643; https://doi.org/10.3390/pathogens14070643 - 28 Jun 2025
Abstract
The case-fatality rate of severe leptospirosis can exceed 50%. This retrospective cohort study examined 111 individuals with laboratory-confirmed leptospirosis admitted to Cairns Hospital, a referral hospital in tropical Australia, between January 2015 and June 2024. We examined the patients’ demographic, clinical, laboratory and
[...] Read more.
The case-fatality rate of severe leptospirosis can exceed 50%. This retrospective cohort study examined 111 individuals with laboratory-confirmed leptospirosis admitted to Cairns Hospital, a referral hospital in tropical Australia, between January 2015 and June 2024. We examined the patients’ demographic, clinical, laboratory and imaging findings at presentation and then correlated them with the patients’ subsequent clinical course. Severe disease was defined as the presence of pulmonary haemorrhage or a requirement for intensive care unit (ICU) admission. The patients’ median (interquartile range) age was 38 (24–55) years; 85/111 (77%) were transferred from another health facility. Only 13/111 (12%) had any comorbidities. There were 63/111 (57%) with severe disease, including 56/111 (50%) requiring ICU admission. Overall, 56/111 (50%) required vasopressor support, 18/111 (16%) needed renal replacement therapy, 14/111 (13%) required mechanical ventilation and 2/111 (2%) needed extracorporeal membrane oxygenation. Older age—but not comorbidity—was associated with the presence of severe disease. Hypotension, respiratory involvement, renal involvement and myocardial injury—but not liver involvement—frequently heralded a requirement for ICU care. Every patient in the cohort survived to hospital discharge. Leptospirosis can cause multi-organ failure in otherwise well young people in tropical Australia; however, patient outcomes are usually excellent in the country’s well-resourced health system.
Full article
(This article belongs to the Section Bacterial Pathogens)
►▼
Show Figures

Figure 1
Open AccessArticle
Molecular Surveillance of Neoehrlichia mikurensis and Anaplasma phagocytophilum in Ticks from Urbanized Areas of Lithuania
by
Justina Snegiriovaitė, Indrė Lipatova, Miglė Razgūnaitė, Algimantas Paulauskas and Jana Radzijevskaja
Pathogens 2025, 14(7), 642; https://doi.org/10.3390/pathogens14070642 - 28 Jun 2025
Abstract
►▼
Show Figures
Neoehrlichia mikurensis and Anaplasma phagocytophilum, both members of the Anaplasmataceae family, are pathogens that can cause diseases in animals and humans. Ixodid ticks are the primary vectors for both species. While urban green spaces offer various ecological and social benefits, there is
[...] Read more.
Neoehrlichia mikurensis and Anaplasma phagocytophilum, both members of the Anaplasmataceae family, are pathogens that can cause diseases in animals and humans. Ixodid ticks are the primary vectors for both species. While urban green spaces offer various ecological and social benefits, there is increasing evidence suggesting potential public health risks, particularly increased exposure to vector-borne diseases. The aim of the present study was to assess the prevalence and co-occurrence of A. phagocytophilum and N. mikurensis in ticks from urban environments in Lithuania. A total of 3599 Ixodes ricinus and 29 Dermacentor reticulatus were collected from 31 urban and 21 peri-urban areas. Ticks were examined for pathogens using duplex real-time PCR. Anaplasma phagocytophilum was detected in 4.47% of tested ticks, while N. mikurensis in 6.17%. Co-infection was found in 0.42% of I. ricinus specimens. Phylogenetic analysis of the groEl gene revealed low genetic variability of N. mikurensis and the circulation of two ecotypes (I and II) of A. phagocytophilum. Additionally, Ehrlichia muris was identified in I. ricinus ticks. This study is the first report of N. mikurensis detection in ticks from Lithuania. Our findings highlight the potential risk posed by tick-borne pathogens in urban and peri-urban areas of the country.
Full article

Figure 1
Open AccessCommunication
Genetic Diversity of Enterocytozoon bieneusi in Diarrheic Shelter Dogs in Romania: First Molecular and Phylogenetic Evidence
by
Mirela Imre, Gheorghe Dărăbuș, Sorin Morariu, Krisztián Szabó, Marius-Stelian Ilie, Tiana Florea, Alexandra Pocinoc, Reem Awwad and Kálmán Imre
Pathogens 2025, 14(7), 641; https://doi.org/10.3390/pathogens14070641 - 27 Jun 2025
Abstract
Enterocytozoon bieneusi is one of the most common microsporidian parasites, primarily infecting the intestinal epithelial cells of a broad range of animal species, including humans. To date, no scientific reports have documented Enterocytozoon spp. in animal hosts in Romania. This study aimed to
[...] Read more.
Enterocytozoon bieneusi is one of the most common microsporidian parasites, primarily infecting the intestinal epithelial cells of a broad range of animal species, including humans. To date, no scientific reports have documented Enterocytozoon spp. in animal hosts in Romania. This study aimed to assess the occurrence and genetic characteristics of E. bieneusi in shelter dogs, as well as its potential public health relevance. Between December 2022 and May 2025, a total of 112 freshly voided diarrheal fecal samples were collected from dogs housed in a shelter near Timișoara Municipality, Romania. The samples were subjected to molecular analysis using a two-step nested polymerase chain reaction (PCR) targeting the internal transcribed spacer (ITS) region of the rRNA gene. The resulting sequences were deposited in GenBank® and analyzed phylogenetically. PCR analysis revealed E. bieneusi DNA in 11 (9.8%) samples, identifying two genotypes, with PtEb IX (n = 10) as the dominant genotype and BEB4 (n = 1), which has zoonotic potential. A significant difference in prevalence was found between juvenile (23.1%) and adult (5.8%) dogs (p = 0.026). Phylogenetic analysis of the ITS sequences showed that the isolates clustered into two distinct clades alongside reference sequences from the GenBank® database. This is the first report of E. bieneusi infection in animals in Romania, providing essential baseline data and highlighting the need for broader surveillance into its prevalence and genetic diversity in other potential hosts. These results reflect the prevalence and genetic diversity of E. bieneusi exclusively among symptomatic (diarrheic) dogs and should not be generalized to the broader shelter dog population.
Full article
(This article belongs to the Section Fungal Pathogens)
►▼
Show Figures

Figure 1
Open AccessArticle
Healing with Risks: How Zoonotic Potential Influences the Use of Wild Mammals in Traditional Medicine
by
Heliene Mota Pereira, Mayara Guimarães Beltrão, Anna Karolina Martins Borges, Weslley Ruan Guimarães da Silva, Danilo Vicente Batista Oliveira and Rômulo Romeu Nóbrega Alves
Pathogens 2025, 14(7), 640; https://doi.org/10.3390/pathogens14070640 - 27 Jun 2025
Abstract
Most infectious diseases affecting humans are zoonotic in origin, with mammals serving as the main reservoirs. Frequent interactions between humans and animals, especially in the context of their use for food, medicine, and other purposes, pose significant public health risks, as recently demonstrated
[...] Read more.
Most infectious diseases affecting humans are zoonotic in origin, with mammals serving as the main reservoirs. Frequent interactions between humans and animals, especially in the context of their use for food, medicine, and other purposes, pose significant public health risks, as recently demonstrated by the SARS-CoV-2 pandemic. In traditional medicine, many species—some of which are also used as food—are valued for their therapeutic versatility, that is, the diversity of medicinal uses attributed to each species. This study investigates the role of zoonotic potential in the selection of mammals used in traditional medicine at a global scale. We compiled data on 411 wild mammal species across 17 orders, identifying 5.146 associated pathogens, of which 2.778 (53.9%) also infect humans. Most diseases transmitted by these species are caused by viruses (33.4%), bacteria (23.3%), and helminths (22.3%). These mammals are used to treat at least 500 diseases or symptoms, and 4.3% of the species show high therapeutic versatility (RI > 1). Our results indicate that species selection is shaped by both biological and cultural factors, with zoonotic potential being the most influential: species with a higher risk of disease transmission tend to be less used. These findings highlight the importance of incorporating zoonotic risk into research and policies regarding the medicinal use of wildlife.
Full article
(This article belongs to the Special Issue Zoonotic Vector-Borne Infectious Diseases: The One Health Perspective)
►▼
Show Figures

Figure 1
Open AccessArticle
Emergence of Dengue Virus Serotypes 1 and 3 in Mahottari and Adjacent Areas of Southern Nepal
by
Sabin Shrestha, Sandesh Rimal, Anjana Kharbuja, Manoj Kumar Ray, Susmita Shrestha, Anjali Dulal, Suprabha Subedi, Ashma Khadka, Nabaraj Adhikari, Meghnath Dhimal, Basu Dev Pandey, Takeshi Urano, Kouichi Morita, Mya Myat Ngwe Tun and Shyam Prakash Dumre
Pathogens 2025, 14(7), 639; https://doi.org/10.3390/pathogens14070639 - 26 Jun 2025
Abstract
Dengue has been a serious public health concern in Nepal since the past few years, with concurrent big outbreaks occurring in 2022–2024. This cross-sectional study was conducted among febrile patients visiting hospitals in Mahottari district in southern Nepal. A total of 2141 dengue-suspected
[...] Read more.
Dengue has been a serious public health concern in Nepal since the past few years, with concurrent big outbreaks occurring in 2022–2024. This cross-sectional study was conducted among febrile patients visiting hospitals in Mahottari district in southern Nepal. A total of 2141 dengue-suspected patients were investigated by routine laboratory assays and serological and molecular techniques, including real-time quantitative polymerase chain reaction (RT-qPCR). Among them, 455 (21.3%) were confirmed as dengue cases. The majority of dengue cases (435, 95.6%) had a primary dengue infection. The total bilirubin level was significantly higher in secondary dengue infection than in primary (p = 0.032). The major dengue virus (DENV) serotypes responsible for this outbreak were DENV-1 (45.5%) and DENV-2 (40.9%), while 13.6% patients had DENV-3 infection. DENV-3 infection showed a significantly higher viral load (median: 7.71 Log10 copies/mL; range: 6.48–7.94) compared to DENV-1 (6.72 Log10 copies/mL; 5.49–7.17) and DENV-2 (4.76 Log10 copies/mL; 2.32–6.96). Adult patients exhibited a significantly higher viral load than children (p = 0.035). NS1- and IgM-positive as well as admitted patients had a higher viral load (p < 0.05). Co-circulation of multiple serotypes (DENV-1, -2, -3) was confirmed with the first introduction of DENV-1 and DENV-3 in Mahottari and surrounding areas in the 2023 outbreak. Identification of the circulating DENV serotypes is crucial to understanding the epidemiological trend and dynamics of population immunity. These findings underscore the need of nation-wide integrated surveillance, including genomic data generation, in Nepal for disease control, prevention, and potential vaccine implication.
Full article
(This article belongs to the Section Viral Pathogens)
►▼
Show Figures

Figure 1
Open AccessArticle
Inhibitory Activity of Compounds Obtained from Streptomyces Against Trypanosoma cruzi
by
Jorge Andrés Delgado-Garduño, Lucio Galaviz-Silva, Ma Guadalupe Rojas-Verde, Joel Horacio Elizondo-Luevano, Lidia Baylón-Pacheco, José Luis Rosales-Encina, Guadalupe Gutiérrez-Soto and Zinnia Judith Molina-Garza
Pathogens 2025, 14(7), 638; https://doi.org/10.3390/pathogens14070638 - 26 Jun 2025
Abstract
Chagas disease (ChD) caused by Trypanosoma cruzi remains a major public health concern, affecting approximately 8 million people worldwide. However, the number of undiagnosed cases is likely much higher. Existing treatments rely on benznidazole and nifurtimox which, despite their efficacy during the acute
[...] Read more.
Chagas disease (ChD) caused by Trypanosoma cruzi remains a major public health concern, affecting approximately 8 million people worldwide. However, the number of undiagnosed cases is likely much higher. Existing treatments rely on benznidazole and nifurtimox which, despite their efficacy during the acute phase of infection, are often associated with severe side effects that can be life-threatening. As a promising alternative, actinomycetes—which are renowned for producing pharmacologically and industrially relevant metabolites—have demonstrated potent antimicrobial properties; however, their antiparasitic potential remains largely unexplored. This study evaluated the anti-trypanocidal activities of extracellular metabolites produced by Streptomyces thermocarboxydus strain Chi-43 (ST-C43) and Streptomyces sp. strain Chi-104 (S-C104) against epimastigote, trypomastigote, and amastigote forms of T. cruzi. The strains were cultured in ISP2 broth, and their extracellular metabolites were assessed via antiparasitic diffusion assays in microplates. The 50% lethal concentration (LC50) values ranged from 102 to 116 μg/mL against epimastigotes and trypomastigotes. The antiparasitic activity was confirmed through 3-(4,5-dimetiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT)-based spectrophotometric assays and optical microscopy. Toxicity assays revealed that the extracellular metabolites were non-toxic to Artemia salina, non-cytotoxic to Huvecs, and non-hemolytic to human erythrocytes. Dose–response regression analysis showed statistically significant differences (p ≤ 0.05). LC-MS/MS analysis identified amphomycin and K-252c aglycone staurosporine as the active antiparasitic compounds. These findings highlight the potential of Streptomyces-derived extracellular metabolites as novel, selective, and safe anti-T. cruzi agents. Nevertheless, further studies in murine or preclinical models are needed to validate their efficacy and support future clinical applications for the treatment of ChD.
Full article
(This article belongs to the Special Issue Trypanosoma cruzi Infection: Cellular and Molecular Basis)
►▼
Show Figures

Figure 1
Open AccessArticle
High Diversity and Prevalence of Potentially Pathogenic Free-Living Amoebae in Water Sources from Castilla y León, Spain
by
Patricia Pérez-Pérez, Iván Rodríguez-Escolar, José E. Piñero, Rodrigo Morchón and Jacob Lorenzo-Morales
Pathogens 2025, 14(7), 637; https://doi.org/10.3390/pathogens14070637 - 25 Jun 2025
Abstract
►▼
Show Figures
Free-living amoebae (FLA) such as Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, Sappinia pedata, Vermamoeba vermiformis and Vahlkampfia spp. are causal agents of deadly and/or disabling infections in humans. Despite recent data showing an increase in infection cases worldwide, studies on
[...] Read more.
Free-living amoebae (FLA) such as Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, Sappinia pedata, Vermamoeba vermiformis and Vahlkampfia spp. are causal agents of deadly and/or disabling infections in humans. Despite recent data showing an increase in infection cases worldwide, studies on the prevalence of these emerging pathogens in water sources are scarce. Moreover, climate change is believed to facilitate the expansion and persistence of these environmental pathogens, further emphasizing the need for comprehensive surveillance. Therefore, the current study investigates the variety and abundance of free-living amoebae in different water sources in the autonomous community of Castilla y León, Spain, during different seasons of the year. Vermamoeba vermiformis was the most prevalent species and was detected in rivers, swamps, irrigation waters, swimming pools and recreational fountains. Moreover, genera such as Acanthamoeba and Naegleria and Vahlkampfia were also identified. This study highlights the diversity of FLA in the region and their relationship with local water characteristics. Given that certain FLA species are opportunistic pathogens, these results emphasize the necessity of monitoring this area and water sources.
Full article

Figure 1
Open AccessArticle
Phylogeographic Analysis of Clade 2.3.4.4b H5N1 in Serbia Reveals Repeated Introductions and Spread Across the Balkans
by
Sofija Šolaja, Dimitrije Glišić, Ljubiša Veljović, Ivan Milošević, Emilija Nićković, Jakov Nišavić and Vesna Milićević
Pathogens 2025, 14(7), 636; https://doi.org/10.3390/pathogens14070636 - 25 Jun 2025
Abstract
Highly pathogenic avian influenza (HPAI) H5N1 continues to pose a major threat to animal and public health. Since its emergence, clade 2.3.4.4b has become the dominant global lineage, associated with widespread outbreaks in Europe. This study aimed to characterise the H5N1 strains detected
[...] Read more.
Highly pathogenic avian influenza (HPAI) H5N1 continues to pose a major threat to animal and public health. Since its emergence, clade 2.3.4.4b has become the dominant global lineage, associated with widespread outbreaks in Europe. This study aimed to characterise the H5N1 strains detected in backyard chickens in Serbia and investigate their phylogenetic and phylogeographic relationships with historical and currently circulating strains in Serbia and the broader region. Samples collected in 2024 were tested by qRT-PCR, and positive samples were propagated in MDCK cells. Whole genome sequencing of isolated virus was performed using the MinION Mk1C platform (ONT, Oxford, UK). Bayesian phylogenetic and phylogeographic analyses were conducted using BEAST X and SPREAD3 v.9.6. The results revealed three independent introductions of H5N1 into Serbia between 2020 and 2024. The spatiotemporal diffusion patterns confirmed both north–south and west–east viral spread from Northern and Central Europe into the Balkans. Additionally, Serbia was identified as a critical transit and divergence point in the regional transmission network, highlighting its role in the spread of H5N1 between Western and Eastern Europe. These findings underscore the importance of continued genomic surveillance in both domestic and wild bird populations to better understand and reduce HPAI spread.
Full article
(This article belongs to the Special Issue Current Challenges in Veterinary Virology)
►▼
Show Figures

Figure 1

Journal Menu
► ▼ Journal Menu-
- Pathogens Home
- Aims & Scope
- Editorial Board
- Reviewer Board
- Topical Advisory Panel
- Instructions for Authors
- Special Issues
- Topics
- Sections & Collections
- Article Processing Charge
- Indexing & Archiving
- Editor’s Choice Articles
- Most Cited & Viewed
- Journal Statistics
- Journal History
- Journal Awards
- Conferences
- Editorial Office
Journal Browser
► ▼ Journal BrowserHighly Accessed Articles
Latest Books
E-Mail Alert
News
Topics
Topic in
Biomolecules, Foods, Metabolites, Microorganisms, Pathogens, Bacteria
Bioinformatics, Machine Learning and Risk Assessment in Food Industry
Topic Editors: Bing Niu, Suren Rao Sooranna, Pufeng DuDeadline: 31 July 2025
Topic in
Animals, Pathogens, Veterinary Sciences, Zoonotic Diseases
Zoonotic Vector-Borne Diseases of Companion Animals
Topic Editors: Anastasia Diakou, Donato TraversaDeadline: 30 September 2025
Topic in
JoF, Microbiology Research, Microorganisms, Pathogens
Pathophysiology and Clinical Management of Fungal Infections
Topic Editors: Allan J. Guimarães, Marcos de Abreu AlmeidaDeadline: 30 November 2025
Topic in
Infectious Disease Reports, Insects, IJERPH, Pathogens, TropicalMed, Zoonotic Diseases
Vector-Borne Disease Spatial Epidemiology, Disease Ecology, and Zoonoses
Topic Editors: Chad L. Cross, Louisa Alexandra MessengerDeadline: 31 December 2025

Conferences
Special Issues
Special Issue in
Pathogens
Oral Microbiome and Human Systemic Health
Guest Editors: Milena Radunovic, Natalia Di PietroDeadline: 13 July 2025
Special Issue in
Pathogens
Understanding Microbial Keratitis: Basic Science, Epidemiology, Diagnosis and Management
Guest Editors: Chameen Samarawickrama, Vannessa Leung, Yashar Seyed Razavi, Samantha BobbaDeadline: 13 July 2025
Special Issue in
Pathogens
Acanthamoeba Infections
Guest Editors: Rubén L. Rodríguez-Expósito, Ines SifaouiDeadline: 15 July 2025
Special Issue in
Pathogens
The Host-Pathogen Interaction in Cystic Fibrosis
Guest Editors: Angela Sandri, Caterina Signoretto, Laura VeschettiDeadline: 15 July 2025
Topical Collections
Topical Collection in
Pathogens
Novel Strategies on Antiviral Drug Discovery Against Human Diseases
Collection Editors: Jun Wang, Richard Y. Zhao, Lin Li
Topical Collection in
Pathogens
Bovine Leukemia Virus Infection
Collection Editors: Tasia M. (Taxis) Kendrick, Paul C. Bartlett
Topical Collection in
Pathogens
Current Status of Research on Gut Metabolites and Microbiota
Collection Editor: Ana Elena Pérez Cobas