Molecular Advances in Prenatal Exposure to Environmental Toxicants

A special issue of Cells (ISSN 2073-4409).

Deadline for manuscript submissions: 20 July 2025 | Viewed by 5704

Special Issue Editors


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Guest Editor
C. S. Mott Center, Wayne State University, 275 East Hancock, Detroit, MI 48201, USA
Interests: prenatal exposures; environmental chemicals; environmental toxicants; humans and model organisms; health outcomes in offspring
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E-Mail Website
Guest Editor
Reproductive Endocrinology and Cell Signaling Laboratory, Department of Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX 77843, USA
Interests: environmental exposures

Special Issue Information

Dear Colleagues,

Prenatal substance exposure remains a critical concern in obstetrics and pediatric healthcare due to its significant impact on fetal development and long-term health outcomes. The ongoing evolution of molecular biology, genetic technologies, and chemical analytical approaches has propelled our understanding of the mechanisms underlying these effects. This Special Issue focuses on the latest molecular advances that shed light on the pathophysiological changes caused by prenatal exposure to various substances, including illicit drugs, alcohol, tobacco, and prescription medications, as well as environmental exposures such as heavy metals, phthalates, pesticides, and PFAS.

Recent molecular studies have emphasized the role of epigenetic modifications as a key mechanism through which prenatal substance exposure affects fetal development. DNA methylation, histone modification, and non-coding RNAs have been shown to mediate alterations in gene expression in the developing fetus, leading to potential long-term consequences such as neurodevelopmental disorders, metabolic syndrome, and cardiovascular diseases. For instance, alcohol exposure in utero has been linked to specific changes in the methylation patterns of genes involved in neural development, which correlates with the cognitive deficits observed in Fetal Alcohol Spectrum Disorders (FASDs).

Furthermore, advances in transcriptomic profiling have allowed researchers to identify gene expression signatures specific to different types of prenatal exposure. This profiling not only enhances our understanding of the developmental pathways altered by these exposures but also aids in the development of biomarkers that could facilitate early diagnosis and intervention. Innovative techniques such as single-cell RNA sequencing now offer insights into the cell-type-specific effects of substances, providing a detailed map of developmental disruptions that occur at the microscopic level.

Proteomics is another expanding field contributing to our understanding of prenatal substance exposure. By studying the proteomes of exposed individuals, researchers have begun to unravel the complex protein networks that are dysregulated during development. This approach has been particularly useful in identifying potential therapeutic targets to mitigate the effects of exposure.

In addition to focusing on the direct effects of substance exposure on the fetus, this Special Issue also explores the maternal–fetal interface, including the placenta. The placenta plays a crucial role in mediating the effects of maternal substance use on fetal development. Studies using placental tissue have highlighted how substances alter the placental barrier, transport mechanisms, and secretion of hormones, all of which are essential for healthy fetal development.

The integration of these molecular and chemical analytical techniques is not only enhancing our understanding of how prenatal exposure to substances affects fetal and child health but also setting the stage for potential interventions. By identifying molecular pathways and biomarkers associated with exposure, it is possible to develop targeted therapies that could prevent or reduce the severity of developmental disorders, offering hope for better health outcomes in affected populations.

This Special Issue invites contributions that explore these molecular dimensions, aiming to bridge gaps in our current knowledge and inspire future research directions in the field of prenatal substance exposure.

Prof. Dr. Douglas M. Ruden
Dr. Sudipta Dutta
Guest Editors

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Keywords

  • prenatal exposures
  • toxicogenomics
  • epigenomics
  • placenta
  • perinatal outcomes
  • neurodevelopmental outcomes
  • respiratory outcomes

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Published Papers (4 papers)

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Research

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20 pages, 3756 KiB  
Article
Prenatal Exposure to Metals Is Associated with Placental Decelerated Epigenetic Gestational Age in a Sex-Dependent Manner in Infants Born Extremely Preterm
by Katelyn K. Huff, Kyle R. Roell, Lauren A. Eaves, Thomas Michael O’Shea and Rebecca C. Fry
Cells 2025, 14(4), 306; https://doi.org/10.3390/cells14040306 - 18 Feb 2025
Cited by 1 | Viewed by 874
Abstract
Prenatal exposure to metals can influence fetal programming via DNA methylation and has been linked to adverse birth outcomes and long-term consequences. Epigenetic clocks estimate the biological age of a given tissue based on DNA methylation and are potential health biomarkers. This study [...] Read more.
Prenatal exposure to metals can influence fetal programming via DNA methylation and has been linked to adverse birth outcomes and long-term consequences. Epigenetic clocks estimate the biological age of a given tissue based on DNA methylation and are potential health biomarkers. This study leveraged the Extremely Low Gestational Age Newborn (ELGAN) study (n = 265) to evaluate associations between umbilical cord tissue concentrations of 11 metals as single exposures as well as mixtures in relation to (1) placental epigenetic gestational age acceleration (eGAA) and the (2) methylation status of the Robust Placental Clock (RPC) CpGs. Linear mixed effect regression models were stratified by infant sex. Both copper (Cu) and manganese (Mn) were significantly associated with a decelerated placental eGA of −0.98 (95% confidence interval (CI): −1.89, −0.07) and −0.90 weeks (95% CI: −1.78, −0.01), respectively, in male infants. Cu and Mn levels were also associated with methylation at RPC CpGs within genes related to processes including energy homeostasis and inflammatory response in placenta. Overall, these findings suggest that prenatal exposures to Cu and Mn impact placental eGAA in a sex-dependent manner in ELGANs, and future work could examine eGAA as a potential mechanism mediating in utero metal exposures and later life consequences. Full article
(This article belongs to the Special Issue Molecular Advances in Prenatal Exposure to Environmental Toxicants)
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16 pages, 3439 KiB  
Article
Comprehensive Search for Genes Involved in Thalidomide Teratogenicity Using Early Differentiation Models of Human Induced Pluripotent Stem Cells: Potential Applications in Reproductive and Developmental Toxicity Testing
by Yu Kato, Takeshi Inaba, Koudai Shinke, Noriko Hiramatsu, Tetsuhiro Horie, Takuya Sakamoto, Yuko Hata, Eiji Sugihara, Tetsuya Takimoto, Noriaki Nagai, Yasuhito Ishigaki, Hajime Kojima, Osamu Nagano, Naoki Yamamoto and Hideyuki Saya
Cells 2025, 14(3), 215; https://doi.org/10.3390/cells14030215 - 2 Feb 2025
Viewed by 1208
Abstract
Developmental toxicity testing is essential to identify substances that may harm embryonic development. This study aimed to establish a protocol for evaluating developmental toxicity using human induced pluripotent stem cells (iPSCs) by analyzing cellular activity and gene expression changes. Two ICH S5(R3) positive [...] Read more.
Developmental toxicity testing is essential to identify substances that may harm embryonic development. This study aimed to establish a protocol for evaluating developmental toxicity using human induced pluripotent stem cells (iPSCs) by analyzing cellular activity and gene expression changes. Two ICH S5(R3) positive substances, valproic acid (VPA), which is a substance previously detected as positive by other test methods, and thalidomide (Thalido), were examined during early trichoderm differentiation without fetal bovine serum. RNA-seq analysis identified seven candidate genes, including TP63, associated with altered expression following exposure to VPA or Thalido. These genes were implicated in pathways related to tissue development, cell growth, and molecular interactions. While the assay effectively detected VPA and Thalido, its limitations include testing only soluble substances and focusing on early differentiation stages. Nevertheless, the protocol demonstrates potential for the classification and evaluation of emerging modality drugs based on physical properties such as solubility, polarity, and pH. Integration with AI analysis may enhance its capacity to uncover genetic variations and evaluate previously uncharacterized substances. This study provides a foundation for alternative developmental toxicity testing methods, with further refinements in the culture method expected to improve accuracy and applicability in regulatory toxicology. Full article
(This article belongs to the Special Issue Molecular Advances in Prenatal Exposure to Environmental Toxicants)
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Review

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34 pages, 1270 KiB  
Review
Heavy Metals in Umbilical Cord Blood: Effects on Epigenetics and Child Development
by Sudipta Dutta and Douglas M. Ruden
Cells 2024, 13(21), 1775; https://doi.org/10.3390/cells13211775 - 26 Oct 2024
Cited by 4 | Viewed by 2494
Abstract
Heavy metals like arsenic, mercury, cadmium, and lead are harmful pollutants that can change how our genes are regulated without altering the DNA sequence, specifically through a process called DNA methylation (DNAm) at 5-methylcytosine, an epigenetic mark that we will focus on in [...] Read more.
Heavy metals like arsenic, mercury, cadmium, and lead are harmful pollutants that can change how our genes are regulated without altering the DNA sequence, specifically through a process called DNA methylation (DNAm) at 5-methylcytosine, an epigenetic mark that we will focus on in this review. These changes in DNAm are most sensitive during pregnancy, a critical time for development when these modifications can affect how traits are expressed. Historically, most research on these environmental effects has focused on adults, but now there is more emphasis on studying the impacts during early development and childhood. The placenta acts as a protective barrier between the mother and the baby, and by examining it, scientists can identify changes in key genes that might affect long-term health. This review looks at how exposure to heavy metals during pregnancy can cause changes in the gene regulation by DNAm in newborns, as seen in their umbilical cord blood. These changes reflect the baby’s genetic state during pregnancy and can be influenced by the mother’s environment and genetics, as well as the baby’s own genetics. Full article
(This article belongs to the Special Issue Molecular Advances in Prenatal Exposure to Environmental Toxicants)
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Other

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23 pages, 433 KiB  
Systematic Review
Endocrine-Disrupting Chemicals and the Effects of Distorted Epigenetics on Preeclampsia: A Systematic Review
by Balu Usha Rani, Ramasamy Vasantharekha, Winkins Santosh, Thangavelu Swarnalingam and Seetharaman Barathi
Cells 2025, 14(7), 493; https://doi.org/10.3390/cells14070493 - 26 Mar 2025
Viewed by 567
Abstract
Background: Preeclampsia (PE) is a critical complication of pregnancy that affects 3% to 5% of all pregnancies and has been linked to aberrant placentation, causing severe maternal and fetal illness and death. Objectives: This systematic review aims to elucidate the association of in-utero [...] Read more.
Background: Preeclampsia (PE) is a critical complication of pregnancy that affects 3% to 5% of all pregnancies and has been linked to aberrant placentation, causing severe maternal and fetal illness and death. Objectives: This systematic review aims to elucidate the association of in-utero endocrine-disrupting chemical (EDC) exposure and microRNAs and their imprinted genes from prenatal and maternal circulation of PE patients. Methods: Databases such as PubMed, PubMed Central, ScienceDirect, the Comparative Toxicogenomics Database (CTD), ProQuest, EBSCOhost, and Google Scholar were utilized to search for articles that investigate the relationships between selected EDCs and epigenetic events such as DNA methylation and microRNAs that are associated with PE. Results: A total of 29 studies were included in the database search. Altered expression of microRNAs (miR-15a-5p, miR-142-3p, and miR-185) in the placenta of PE patients was positively associated with the urinary concentration of phthalates and phenols in the development of the disease in the first trimester. EDCs such as phenols, phthalates, perfluoroalkyl substances (PFOAs), polybrominated diphenyl ethers (PBDEs), and organochlorine phosphates (OCPs) have been reported to be associated with hypertensive disorders in pregnancy. miRNA-31, miRNA-144, miRNA-145, miRNA-210, placental specific clusters (C14MC, and C19MC) may be used as possible targets for PE because of their potential roles in the onset and progression of PE. Conclusions: Prenatal EDC exposure, including exposure to BPA, showed association with signaling pathways including estrogen, sFlt-1/PlGF, ErbB, MAPK/ERK, and cholesterol mechanisms with placental hemodynamics. Even low EDC exposures leave altered epigenetic marks throughout gestation, which might cause PE complications. Full article
(This article belongs to the Special Issue Molecular Advances in Prenatal Exposure to Environmental Toxicants)
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