Promoting Sustainable Agriculture through the Manipulation of Plant-Associated Microbial Communities

A special issue of Agronomy (ISSN 2073-4395). This special issue belongs to the section "Soil and Plant Nutrition".

Deadline for manuscript submissions: closed (15 April 2023) | Viewed by 4352

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Consiglio per la Ricerca in Agricoltura e l’Analisi dell’Economia Agraria (CREA), Research Centre for Vegetable and Ornamental Crops, Corso degli Inglesi 508, 18038 Sanremo, Italy
Interests: plant–parasite interactions; invasive species; soil ecology; biodiversity
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Special Issue Information

Dear Colleagues,

Plants constitute a suitable environment for many groups of microorganisms, showing a great degree of variation in the strength of their association with their hosts. Microorganisms can colonize both the above- and belowground parts of the plants, living either as pure epiphytes or as endophytes. Some of them can create complex connection nets between the plant and their immediate surroundings, such as mycorrhiza. Plants usually favor microbial colonization by non-pathogenic species representing a huge biodiversity that is far from being fully characterized. Plant-associated microorganisms can form rich communities with complex interactions governing their structure and function. The beneficial effects that microbial communities can have on plant health and development open the door to the possibility of manipulating those communities in order to reduce the negative impact that the overuse of pesticides and fertilizers have on agroecosystems and associated natural environments.  

The use of microbial communities to increase plant production covers a diverse set of strategies comprising physical, chemical, and microbiological manipulations to modify the structure and function of soil microbial communities; the addition of compost and plant extracts directly on the aerial parts of the plant in order to prevent the attack and establishment of parasites; the inoculation with non-pathogenic strains of plant pathogens to minimize pathogen infection; the use of well-characterized microbial consortia with selected functions to improve plant defense and development; and the use of adjoining plant species leading to modifications of the rhizosphere communities.

The present Special Issue aims to provide an updated collection of research studies and reviews dealing with the most important aspects of applied microbiology and plant production. The Special Issue welcomes studies dealing with, but not limited to, the following subjects: 

  • Solarization and other physical and chemical methods to modify the composition of soil microbial communities;
  • Use of plant-growth-promoting bacteria as soil inoculants;
  • Control of plant pathogenic organisms by means of microbial antagonists;
  • Use of microbial consortia to enhance plant productivity;
  • Non-nutritive effects of compost and vermicompost on plant-associated microbial communities and plant performance;
  • Role of the phyllosphere on plant health;
  • Manipulation of phyllosphere and rhizosphere microorganisms to enhance plant health;
  • Plant and soil microbial communities in organic and conventional plant production systems;
  • Contribution of the plant microbiome to the chemical characteristics of the plant host.

Dr. Fernando Monroy
Guest Editor

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Keywords

  • applied microbiology
  • plant microbiome
  • endophytes
  • mycorrhiza
  • compost
  • phyllosphere
  • rhizosphere

Published Papers (2 papers)

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Research

15 pages, 4092 KiB  
Article
Inoculation with Bacillus cereus DW019 Modulates Growth, Yield and Rhizospheric Microbial Community of Cherry Tomato
by Wei Dong, Hongyu Liu, Zhoushen Ning, Zijun Bian, Luxue Zeng and Dibing Xie
Agronomy 2023, 13(6), 1458; https://doi.org/10.3390/agronomy13061458 - 25 May 2023
Cited by 4 | Viewed by 1681
Abstract
Plant growth-promoting rhizobacteria (PGPR) play an important role in promoting plant growth and increasing crop yield. Bacillus cereus DW019, which was previously isolated from an ion-absorbed rare-earth ore of Ganzhou in Southeastern China, has been considered as a PGPR due to its production [...] Read more.
Plant growth-promoting rhizobacteria (PGPR) play an important role in promoting plant growth and increasing crop yield. Bacillus cereus DW019, which was previously isolated from an ion-absorbed rare-earth ore of Ganzhou in Southeastern China, has been considered as a PGPR due to its production of indole-3-acetic acid (IAA), ammonia and siderophore, but its promoting effect on plants remains poorly understood. In this study, autoclaved dead cells and viable cells of Bacillus cereus DW019 at different concentrations were inoculated into pot-cultivated cherry tomato (Lycopersicon esculentum) to investigate the promoting effect on plant growth and yield. A total of 70 days after inoculation, the plants and fruits of cherry tomato were harvested, and their growth indicators, yields, and nutrients were measured. The results showed that biomass, stem thickness, plant height and root length were significantly promoted and that the vitamin C, soluble sugar and soluble protein were significantly increased. Inoculation with Bacillus cereus also modulated the rhizospheric microbial community diversity and structure, especially the proportions of Proteobacteria and Actinobacteriota, which in turn improved the plant height, fresh weight, nutritional quality and rhizosphere soil bacterial diversity of cherry tomato. All the findings suggest that Bacillus cereus DW019 is beneficial to the growth of crops and improves the yield of cherry tomato, suggesting that Bacillus cereus DW019 could be developed into a potential biofertilizer to be used as an agricultural inoculant to increase crop yield and improve the soil ecosystem. Full article
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18 pages, 8171 KiB  
Article
Endophytic Fungi Associated with Mango Show In Vitro Antagonism against Bacterial and Fungal Pathogens
by Er-Fu Yang, Samantha C. Karunarathna, Saowaluck Tibpromma, Steven L. Stephenson, Itthayakorn Promputtha, Abdallah M. Elgorban, Salim Al-Rejaie and Putarak Chomnunti
Agronomy 2023, 13(1), 169; https://doi.org/10.3390/agronomy13010169 - 4 Jan 2023
Cited by 5 | Viewed by 2285
Abstract
Endophytic fungi live in inter-cellular spaces of healthy plant tissues without causing any apparent symptoms of diseases for the host plant. Some fungal endophytes help their plant hosts to survive under biotic and abiotic stresses. In this study, we collected healthy mango leaves [...] Read more.
Endophytic fungi live in inter-cellular spaces of healthy plant tissues without causing any apparent symptoms of diseases for the host plant. Some fungal endophytes help their plant hosts to survive under biotic and abiotic stresses. In this study, we collected healthy mango leaves at the Honghe mango plantations (Yunnan Province) in the winter. A total of 34 different fungal endophytic strains were isolated, and their phylogenetic placements were estimated based on the ITS gene. Members of genus Chaetomium were the dominant fungal endophytes (26%). Common bacterial plant pathogens (Erwinia amylovora and Pseudomonas syringae) and fungal plant pathogens (Botrytis cinerea and Penicillium digitatum) were selected to test the antagonism of the fungal endophytes isolated from mango leaves through co-cultivation in vitro assay. Three strains of Chaetomium sp. viz. KUNCC22-0749, UNCC22-10750, and KUNCC22-10752 showed great inhibition against two bacterial pathogens viz. Erwinia amylovora and Pseudomonas syringae, and Alternaria sp. KUNCC22-10760, Chaetomium sp. KUNCC22-10749, Daldinia sp. KUNCC22-10744, and Rosellinia sp. KUNCC22-10751 also showed great to moderate antagonistic effects against two fungal pathogens viz. Botrytis cinerea and Penicillium digitatum. Full article
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