Metagenomic Analysis for Unveiling Agricultural Microbiome—3rd Edition
A special issue of Agronomy (ISSN 2073-4395). This special issue belongs to the section "Farming Sustainability".
Deadline for manuscript submissions: 15 February 2026
Special Issue Editors
Interests: plant microbiome; metagenomics; bioinformatics
Special Issues, Collections and Topics in MDPI journals
Interests: maize; abiotic stress; root development; microbiome; rhizosphere
Special Issues, Collections and Topics in MDPI journals
Special Issue Information
Dear Colleagues,
The agricultural microbiome plays a significant role in nutrient absorption, disease resistance, and stress resistance in plants and animals; it is an important concept in achieving sustainable agriculture. The purpose of this Special Issue is to promote the development of the field of agricultural microbiomes; submissions that focus on microbiome research related to agriculture, including crops, vegetables, fruits, agricultural products, animal husbandry, aquatic products, and one-health will be accepted. Research on amplicon sequencing is acceptable and works on metagenome, metatranscriptome, metaproteome, metametabolome, bacterial genome, population association analysis, and multi-omics analysis are also recommended in order to more comprehensively use meta-omics technology to analyze the role of the microbiome in agriculture. This research aims to improve our environment and realize the harmonious development of science, technology, and agriculture for one-health.
Prof. Dr. Yong-Xin Liu
Dr. Peng Yu
Guest Editors
Manuscript Submission Information
Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.
Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Agronomy is an international peer-reviewed open access monthly journal published by MDPI.
Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2600 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.
Keywords
- plant microbiome
- root microbiota
- amplicon
- metagenomics
- metatranscriptome
Benefits of Publishing in a Special Issue
- Ease of navigation: Grouping papers by topic helps scholars navigate broad scope journals more efficiently.
- Greater discoverability: Special Issues support the reach and impact of scientific research. Articles in Special Issues are more discoverable and cited more frequently.
- Expansion of research network: Special Issues facilitate connections among authors, fostering scientific collaborations.
- External promotion: Articles in Special Issues are often promoted through the journal's social media, increasing their visibility.
- Reprint: MDPI Books provides the opportunity to republish successful Special Issues in book format, both online and in print.
Further information on MDPI's Special Issue policies can be found here.