Monitoring of Pseudorabies in Wild Boar of Germany—A Spatiotemporal Analysis
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Area and Sample Collection
2.2. Diagnostic Assays
2.3. Spatiotemporal Analysis
2.3.1. Relative Risk
2.3.2. Seroprevalence in Administrative Units
2.3.3. Assessment of the Potential Effect of a Spatial Selection Bias
2.3.4. Evaluation of the Probability of Disease Presence
2.3.5. Hunting Statistics
3. Results
3.1. Nationwide PRV Monitoring in Wild Boar (2010–2015)
3.2. Spatiotemporal Analysis of the Combined Data Set (2000–2015)
3.2.1. Spatiotemporal Analysis of the RR
3.2.2. Spatiotemporal Analysis of the PRV Seroprevalence at District Level
3.2.3. The Probability of Endemicity and Absence of Disease
4. Discussion
5. Conclusions
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Federal State | 2010 | 2011 | 2012 | 2013 | 2014 | 2015 | Total | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N | pos | prev | N | pos | prev | N | pos | prev | N | pos | prev | N | pos | prev | N | pos | prev | N | pos | prev | 95% CI | |
BE | 91 | 14 | 15.38 | 91 | 14 | 15.38 | 8.67–24.46 | |||||||||||||||
BB | 73 | 6 | 8.22 | 52 | 4 | 7.69 | 131 | 13 | 9.92 | 97 | 0 | 0 | 353 | 23 | 6.52 | 4.17–9.62 | ||||||
BW | 768 | 18 | 2.34 | 1131 | 4 | 0.35 | 1118 | 15 | 1.34 | 1062 | 14 | 1.32 | 1212 | 22 | 1.82 | 1286 | 26 | 2.02 | 6577 | 99 | 1.51 | 1.23–1.83 |
BY | 1575 | 81 | 5.14 | 2798 | 287 | 10.26 | 4606 | 550 | 11.94 | 4125 | 405 | 9.82 | 13,104 | 1323 | 10.10 | 9.59–10.62 | ||||||
HB | ||||||||||||||||||||||
HE | 2895 | 35 | 1.21 | 4900 | 64 | 1.31 | 3015 | 54 | 1.79 | 1751 | 33 | 1.88 | 2909 | 68 | 2.34 | 3073 | 72 | 2.34 | 18,543 | 326 | 1.76 | 1.57–1.96 |
HH | ||||||||||||||||||||||
LS | 2760 | 222 | 8.04 | 1305 | 56 | 4.29 | 1939 | 11 | 0.57 | 4430 | 22 | 0.50 | 10,434 | 311 | 2.98 | 2.66–3.33 | ||||||
MWV | 1104 | 135 | 12.23 | 1104 | 135 | 12.23 | 10.35–14.31 | |||||||||||||||
NW | 78 | 0 | 0 | 68 | 0 | 0 | 53 | 0 | 0 | 799 | 3 | 0.38 | 998 | 3 | 0.30 | 0.06–0.88 | ||||||
RP | 100 | 5 | 5.00 | ,_ | _ | _ | _ | _ | _ | _ | _ | _ | 1936 ** | 47 ** | 2.43 ** | 9 | 1 | 11.11 | 2092 | 6 | 0.29 | 0.11–0.62 |
SH | 279 | 2 | 0.72 | 848 | 0 | 0 | 619 | 0 | 0 | 1184 | 3 | 0.25 | 599 | 0 | 0 | 3529 | 5 | 0.14 | 0.05–0.33 | |||
SL | 1397 | 2 | 0.14 | 330 | 1 | 0.30 | 373 | 25 | 6.70 | 2100 | 28 | 1.33 | 0.89–1.92 | |||||||||
SN | 5695 | 1624 | 28.52 | 5464 | 1665 | 30.47 | 6889 | 2048 | 29.73 | 6542 | 2171 | 33.19 | 7527 | 2585 | 34.34 | 6258 | 2.126 | 33.97 | 38,375 | 12,219 | 31.84 | 31.38–32.31 |
ST | 996 | 79 | 7.93 | 936 | 122 | 13.03 | 1101 | 138 | 12.53 | 1855 | 182 | 9.81 | 4888 | 521 | 10.66 | 9.81–11.56 | ||||||
TH | 917 | 18 | 1.96 | 1343 | 38 | 2.83 | 1028 | 41 | 3.99 | 1983 | 88 | 4.44 | 1336 | 66 | 4.94 | 6607 | 251 | 3.80 | 3.35–4.29 | |||
Total | 10,933 | 1684 | 15.40 | 14,193 | 1889 | 11.71 | 18,670 | 2543 | 13.62 | 16,093 | 2728 | 16.59 | 22,592 | 3478 | 15.39 | 24,331 | 2.942 | 12.09 | 108,748 | 15,311 | 14.08 | 13.87–14.29 |
Administrative Unit | Town/Village | Municipality | District | Total |
---|---|---|---|---|
No. of Cases * | 5274 | 380 | 14,898 | 20,552 |
No. of Controls # | 43,906 | 16,023 | 89,665 | 149,594 |
95% CI | |||||
---|---|---|---|---|---|
Data Set | Time Interval | Sample Size | Prevalence (%) | LCL 1 | UCL 1 |
Original | Total | 149,594 | 13.73 | 13.55 | 13.90 |
1 | 74,797 | 12.91 | 12.67 | 13.15 | |
2 | 74,797 | 14.54 | 14.29 | 14.80 | |
Adjusted | 1 | 74,797 | 8.71 | -- | -- |
2 | 74,797 | 13.40 | -- | -- |
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Denzin, N.; Conraths, F.J.; Mettenleiter, T.C.; Freuling, C.M.; Müller, T. Monitoring of Pseudorabies in Wild Boar of Germany—A Spatiotemporal Analysis. Pathogens 2020, 9, 276. https://doi.org/10.3390/pathogens9040276
Denzin N, Conraths FJ, Mettenleiter TC, Freuling CM, Müller T. Monitoring of Pseudorabies in Wild Boar of Germany—A Spatiotemporal Analysis. Pathogens. 2020; 9(4):276. https://doi.org/10.3390/pathogens9040276
Chicago/Turabian StyleDenzin, Nicolai, Franz J. Conraths, Thomas C. Mettenleiter, Conrad M. Freuling, and Thomas Müller. 2020. "Monitoring of Pseudorabies in Wild Boar of Germany—A Spatiotemporal Analysis" Pathogens 9, no. 4: 276. https://doi.org/10.3390/pathogens9040276
APA StyleDenzin, N., Conraths, F. J., Mettenleiter, T. C., Freuling, C. M., & Müller, T. (2020). Monitoring of Pseudorabies in Wild Boar of Germany—A Spatiotemporal Analysis. Pathogens, 9(4), 276. https://doi.org/10.3390/pathogens9040276