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Genes, Volume 16, Issue 2

February 2025 - 128 articles

Cover Story: The variants rs10517086 and rs1534422 are predictive of type 1 diabetes mellitus (T1DM) development and poor residual β cell function within the first year of diagnosis. However, the mechanism by which risk is conferred is unknown. Using CRISPR/Cas9, we show that both variants significantly reduce glucose-stimulated insulin secretion, increase the production of pro-inflammatory cytokines, and reduce the expression of several β cell markers and transcription factors. However, much of this appeared to be under the control of HNF1A. Analysis of human data revealed an association of rs10517086_A genotype with C-peptide in 153 individuals with T1DM, but not in 417 people with T2DM. Our data suggest that rs1534422 and rs10517086 exert multiple insults on the β cell through excessive upregulation of HNF1A and the induction of pro-inflammatory cytokines. View this paper
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Articles (128)

  • Brief Report
  • Open Access
2 Citations
1,176 Views
11 Pages

Expanding the Clinical Spectrum Associated with the Recurrent Arg203Trp Variant in PACS1: An Italian Cohort Study

  • Stefano Pagano,
  • Diego Lopergolo,
  • Alessandro De Falco,
  • Camilla Meossi,
  • Sara Satolli,
  • Rosa Pasquariello,
  • Rosanna Trovato,
  • Alessandra Tessa,
  • Claudia Casalini and
  • Lucia Pfanner
  • + 3 authors

16 February 2025

Background/Objectives: Schuurs–Hoeijmakers syndrome (SHMS), also known as PACS1 neurodevelopmental disorder, is a rare condition characterized by intellectual disability, distinctive craniofacial abnormalities, and congenital malformations. SHM...

  • Feature Paper
  • Article
  • Open Access
1,143 Views
17 Pages

15 February 2025

Background: The Ommastrephidae family of cephalopods is important in marine ecosystems as both predators and prey. Species such as Todarodes pacificus, Illex argentinus, and Dosidicus gigas are economically valuable but are threatened by overfishing...

  • Review
  • Open Access
2 Citations
3,336 Views
18 Pages

Chromatin Remodulator CHD4: A Potential Target for Cancer Interception

  • Krishnendu Goswami,
  • Karthikkumar Venkatachalam,
  • Surya P. Singh,
  • Chinthalapally V. Rao and
  • Venkateshwar Madka

15 February 2025

Cancer initiation and progression are associated with numerous somatic mutations, genomic rearrangements, and structure variants. The transformation of a normal cell into a cancer cell involves spatio-temporal changes in the regulation of different g...

  • Article
  • Open Access
2 Citations
1,441 Views
20 Pages

The Impact of the Competition on miRNA, Proteins, and Metabolites in the Blood Exosomes of the Yili Horse

  • Xinxin Yuan,
  • Xinkui Yao,
  • Yaqi Zeng,
  • Jianwen Wang,
  • Wanlu Ren,
  • Tongliang Wang,
  • Xueyan Li,
  • Lipin Yang,
  • Xixi Yang and
  • Jun Meng

15 February 2025

Purpose: Horse racing may cause stress-induced physiological changes and tissue damage in horses, but the changes in miRNA expression, protein expression, and metabolic substances in the plasma exosomes of the Yili horse after racing are still unclea...

  • Article
  • Open Access
1,334 Views
16 Pages

Genetic Variants in RASSF1 (rs2073498), SERPINE1 (rs1799889), and EFNA1 (rs12904) Are Associated with Susceptibility in Mexican Patients with Colorectal Cancer: Clinical Associations and Their Analysis In Silico

  • César de Jesús Tovar-Jácome,
  • Clara Ibet Juárez-Vázquez,
  • Martha Patricia Gallegos-Arreola,
  • José Elías García-Ortiz,
  • María Eugenia Marín-Contreras,
  • Tomás Daniel Pineda-Razo,
  • Ignacio Mariscal-Ramírez,
  • Oscar Durán-Anguiano,
  • Aldo Antonio Alcaraz-Wong and
  • Rubria Alicia González-Sánchez
  • + 4 authors

15 February 2025

Background/Objectives: Colorectal cancer (CRC) is the second leading cause of cancer death worldwide. Variants in genes that regulate processes such as apoptosis and angiogenesis play a significant role in CRC. The objective of this study is to inves...

  • Article
  • Open Access
3 Citations
1,324 Views
15 Pages

Identification and Expression Patterns of Critical Genes Related to Coat Color in Cashmere Goats

  • Dubala Wu,
  • Jing Fan,
  • Yue Pang,
  • Binhong Wen,
  • Wei Li,
  • Guanghao Yang,
  • Huiyu Cheng,
  • Jiahui Shi,
  • Ting Wang and
  • Sile Hu
  • + 4 authors

14 February 2025

Background/Objectives: Research on cashmere goat coat color is crucial for optimizing cashmere goat breeds and increasing their economic value. To identify key genes associated with the formation of cashmere goat coat color and to provide molecular m...

  • Article
  • Open Access
3 Citations
2,625 Views
17 Pages

Retinal Disease Variability in Female Carriers of RPGR Variants Associated with Retinitis Pigmentosa: Clinical and Genetic Parameters

  • Sena A. Gocuk,
  • Thomas L. Edwards,
  • Jasleen K. Jolly,
  • Fred K. Chen,
  • David C. Sousa,
  • Myra B. McGuinness,
  • Terri L. McLaren,
  • Tina M. Lamey,
  • Jennifer A. Thompson and
  • Lauren N. Ayton

13 February 2025

Objectives: We sought to investigate the visual function, retinal features, and genotype–phenotype correlations of an Australian cohort of RPGR carriers. Methods: In this cross-sectional study, we evaluated RPGR carriers seen in Melbourne and P...

  • Article
  • Open Access
2 Citations
1,613 Views
17 Pages

Genetic Regulation of Chlorophyll Biosynthesis in Pepper Fruit: Roles of CaAPRR2 and CaGLK2

  • Huagang Sun,
  • Yiyue Zhang,
  • Lingkui Zhang,
  • Xiang Wang,
  • Kang Zhang,
  • Feng Cheng and
  • Shumin Chen

13 February 2025

Background: Pepper (Capsicum annuum L.) is a widely cultivated vegetable crop worldwide, with its rich fruit colors providing unique visual traits and economic value. This study investigated the genetic basis of the immature green fruit color by cons...

  • Article
  • Open Access
2 Citations
1,162 Views
11 Pages

13 February 2025

Background/Objectives: Copy number variations (CNVs) are a significant source of genetic variation and have been shown to influence growth traits in livestock. This study aimed to validate previous CNV candidates within the NSMF gene (XM_015093798.1)...

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Genes - ISSN 2073-4425