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International Journal of Molecular Sciences, Volume 13, Issue 10

2012 October - 91 articles

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Articles (91)

  • Article
  • Open Access
30 Citations
8,601 Views
11 Pages

23 October 2012

This work reports a new method to covalently attach calix[4]arene derivatives onto MCM-41, using a diisocyanate as a linker. The modified mesoporous silicates were characterized by fourier transform infrared spectroscopy (FTIR), thermal analysis (TGA...

  • Review
  • Open Access
18 Citations
7,593 Views
11 Pages

23 October 2012

Epstein-Barr virus (EBV) is associated with nasopharyngeal carcinoma (NPC), but it remains obscure whether EBV is a viral cause of, or only an accompaniment of, NPC. We will discuss the accumulated evidence pointing to the relationship between EBV in...

  • Article
  • Open Access
44 Citations
9,425 Views
16 Pages

Transcriptome Analysis Reveals Putative Genes Involved in Iridoid Biosynthesis in Rehmannia glutinosa

  • Peng Sun,
  • Shuhui Song,
  • Lili Zhou,
  • Bing Zhang,
  • Jianjun Qi and
  • Xianen Li

23 October 2012

Rehmannia glutinosa, one of the most widely used herbal medicines in the Orient, is rich in biologically active iridoids. Despite their medicinal importance, no molecular information about the iridoid biosynthesis in this plant is presently available...

  • Article
  • Open Access
66 Citations
9,834 Views
18 Pages

The Properties of Sintered Calcium Phosphate with [Ca]/[P] = 1.50

  • I-Ming Hung,
  • Wei-Jen Shih,
  • Min-Hsiung Hon and
  • Moo-Chin Wang

22 October 2012

In order to obtain the properties of the sintered as-dried calcium phosphate with [Ca]/[P] = 1.50, the characteristics of sintered pellets have been investigated using X-ray diffraction (XRD), inductively coupled plasma-mass spectrometry (ICP-MS), Fo...

  • Article
  • Open Access
49 Citations
9,131 Views
18 Pages

A Bead-Based Multiplexed Immunoassay to Evaluate Breast Cancer Biomarkers for Early Detection in Pre-Diagnostic Serum

  • Annemieke W. J. Opstal-van Winden,
  • Wendy Rodenburg,
  • Jeroen L. A. Pennings,
  • Conny T. M. Van Oostrom,
  • Jos H. Beijnen,
  • Petra H.M. Peeters,
  • Carla H. Van Gils and
  • Annemieke De Vries

22 October 2012

This study investigates whether a set of ten potential breast cancer serum biomarkers and cancer antigens (osteopontin (OPN), haptoglobin, cancer antigen 15-3 (CA15-3), carcinoembryonic antigen (CEA), cancer antigen 125 (CA-125), prolactin, cancer an...

  • Article
  • Open Access
59 Citations
8,522 Views
16 Pages

22 October 2012

At present, due to the growing attention focused on the issue of tendon–bone healing, we carried out an animal study of the use of genetic intervention combined with cell transplantation for the promotion of this process. Here, the efficacy of bone m...

  • Review
  • Open Access
236 Citations
17,787 Views
46 Pages

Tanshinones: Sources, Pharmacokinetics and Anti-Cancer Activities

  • Yong Zhang,
  • Peixin Jiang,
  • Min Ye,
  • Sung-Hoon Kim,
  • Cheng Jiang and
  • Junxuan Lü

22 October 2012

Tanshinones are a class of abietane diterpene compound isolated from Salvia miltiorrhiza (Danshen or Tanshen in Chinese), a well-known herb in Traditional Chinese Medicine (TCM). Since they were first identified in the 1930s, more than 40 lipophilic...

  • Article
  • Open Access
18 Citations
8,223 Views
13 Pages

Interleukin-6 Gene Promoter-572 C Allele May Play a Role in Rate of Disease Progression in Multiple Sclerosis

  • Jun Yan,
  • Jia Liu,
  • Clement Yihao Lin,
  • ANZGene,
  • Peter A. Csurhes,
  • Michael P. Pender,
  • Pamela A. McCombe and
  • Judith M. Greer

22 October 2012

Multiple sclerosis (MS) is an inflammatory demyelinating disease affecting the central nervous system. Although the exact pathogenesis of MS is unknown, it is generally considered to be an autoimmune disease, with numerous genetic and environmental f...

  • Review
  • Open Access
31 Citations
11,291 Views
11 Pages

22 October 2012

Type 2 diabetes is characterized by pancreatic β-cell dysfunction and insulin resistance, and the number of patients has markedly increased worldwide. In the diabetic state, hyperglycemia per se and subsequent induction of oxidative stress decrease i...

  • Article
  • Open Access
5 Citations
6,865 Views
13 Pages

Lack of Association of Estrogen Receptor Alpha Gene Polymorphisms with Cardiorespiratory and Metabolic Variables in Young Women

  • Ana Cristina Rebelo,
  • Rozangela Verlengia,
  • Vandeni Kunz,
  • Nayara Tamburus,
  • Alvaro Cerda,
  • Rosario Hirata,
  • Mario Hirata and
  • Ester Silva

22 October 2012

This study examined the association of estrogen receptor alpha gene (ESR1) polymorphisms with cardiorespiratory and metabolic parameters in young women. In total, 354 healthy women were selected for cardiopulmonary exercise testing and short-term hea...

  • Article
  • Open Access
8 Citations
6,752 Views
9 Pages

Detection of Ricin Intoxication in Mice Using Serum Peptide Profiling by MALDI-TOF/MS

  • Siyan Zhao,
  • Wen-Sen Liu,
  • Meng Wang,
  • Jiping Li,
  • Yucheng Sun,
  • Nan Li,
  • Feng Hou,
  • Jia-Yu Wan,
  • Zhongyi Li and
  • Linna Liu
  • + 1 author

22 October 2012

Ricin toxin has been regarded as one of the most potent poisons in the plant kingdom, and there is no effective therapeutic countermeasure or licensed vaccine against it. Consequently, early detection of ricin intoxication is necessary. In this study...

  • Review
  • Open Access
36 Citations
8,399 Views
13 Pages

22 October 2012

Multiple sclerosis (MS) is a chronic inflammatory demyelinating and neurodegenerative disease of the central nervous system (CNS) with unknown etiology. It was recently suggested that autoimmunity, which had long been considered to be destructive in...

  • Review
  • Open Access
71 Citations
12,588 Views

19 October 2012

Multiple sclerosis, the clinical features and pathological correlate for which were first described by Charcot, is a chronic neuroinflammatory disease with unknown etiology and variable clinical evolution. Although neuroinflammation is a descriptive...

  • Article
  • Open Access
6 Citations
10,996 Views
23 Pages

19 October 2012

Mounting evidence correlate vitamin D3 (cholecalciferol) supplementation or higher serum levels of vitamin D (25(OH)D) with a lower risk of developing multiple sclerosis (MS), reduced relapse rate, slower progression or fewer new brain lesions. We pr...

  • Article
  • Open Access
7 Citations
6,916 Views
17 Pages

Injury-Induced Accumulation of Glial Cell Line-Derived Neurotrophic Factor in the Rostral Part of the Injured Rat Spinal Cord

  • Takuya Hara,
  • Hidefumi Fukumitsu,
  • Hitomi Soumiya,
  • Yoshiko Furukawa and
  • Shoei Furukawa

19 October 2012

The spinal cord of a 7-week-old female Wistar rat was hemi-transected at thoracic position 10 with a razor blade, and changes in glial cell line-derived neurotrophic factor (GDNF) protein and mRNA expression levels in the spinal cord were examined. G...

  • Article
  • Open Access
91 Citations
13,589 Views
20 Pages

A Systems Biology Approach to Understanding the Mechanisms of Action of Chinese Herbs for Treatment of Cardiovascular Disease

  • Bohui Li,
  • Xue Xu,
  • Xia Wang,
  • Hua Yu,
  • Xiuxiu Li,
  • Weiyang Tao,
  • Yonghua Wang and
  • Ling Yang

19 October 2012

Traditional Chinese Medicine (TCM) involves a broad range of empirical testing and refinement and plays an important role in the health maintenance for people all over the world. However, due to the complexity of Chinese herbs, a full understanding o...

  • Article
  • Open Access
8 Citations
8,076 Views
21 Pages

A Simple Bioconjugate Attachment Protocol for Use in Single Molecule Force Spectroscopy Experiments Based on Mixed Self-Assembled Monolayers

  • Simon J. Attwood,
  • Anna M. C. Simpson,
  • Rachael Stone,
  • Samir W. Hamaia,
  • Debdulal Roy,
  • Richard W. Farndale,
  • Myriam Ouberai and
  • Mark E.Welland

19 October 2012

Single molecule force spectroscopy is a technique that can be used to probe the interaction force between individual biomolecular species. We focus our attention on the tip and sample coupling chemistry, which is crucial to these experiments. We util...

  • Article
  • Open Access
21 Citations
8,845 Views
12 Pages

19 October 2012

We found two NADH-dependent reductases (QNR and bacC) in Microbacterium luteolum JCM 9174 (M. luteolum JCM 9174) that can reduce 3-quinuclidinone to optically pure (R)-(−)-3-quinuclidinol. Alcohol dehydrogenase from Leifsonia sp. (LSADH) was combined...

  • Review
  • Open Access
15 Citations
8,674 Views
15 Pages

19 October 2012

Many of the biochemical details of nucleotide excision repair (NER) have been established using purified proteins and DNA substrates. In cells however, DNA is tightly packaged around histones and other chromatin-associated proteins, which can be an o...

  • Article
  • Open Access
10 Citations
6,083 Views
14 Pages

18 October 2012

The effects of early relief of heavy bilateral carotid stenosis and ischemic postconditioning on hippocampus CA1 neurons are still unclear. In this study, we used a rat model to imitate severe bilateral carotid stenosis in humans. The rats were divid...

  • Article
  • Open Access
27 Citations
9,089 Views
26 Pages

NotI Microarrays: Novel Epigenetic Markers for Early Detection and Prognosis of High Grade Serous Ovarian Cancer

  • Vladimir Kashuba,
  • Alexey A. Dmitriev,
  • George S. Krasnov,
  • Tatiana Pavlova,
  • Ilya Ignatjev,
  • Vasily V. Gordiyuk,
  • Anna V. Gerashchenko,
  • Eleonora A. Braga,
  • Surya P. Yenamandra and
  • Eugene Zabarovsky
  • + 2 authors

18 October 2012

Chromosome 3-specific NotI microarray (NMA) containing 180 clones with 188 genes was used in the study to analyze 18 high grade serous ovarian cancer (HGSOC) samples and 7 benign ovarian tumors. We aimed to find novel methylation-dependent biomarkers...

  • Review
  • Open Access
28 Citations
7,141 Views
20 Pages

Genetic Variability in DNA Repair Proteins in Age-Related Macular Degeneration

  • Janusz Blasiak,
  • Ewelina Synowiec,
  • Antero Salminen and
  • Kai Kaarniranta

18 October 2012

The pathogenesis of age-related macular degeneration (AMD) is complex and involves interactions between environmental and genetic factors, with oxidative stress playing an important role inducing damage in biomolecules, including DNA. Therefore, gene...

  • Article
  • Open Access
6 Citations
7,905 Views
16 Pages

Proteomic Analysis of Albumins and Globulins from Wheat Variety Chinese Spring and Its Fine Deletion Line 3BS-8

  • Chao-Ying Ma,
  • Li-Yan Gao,
  • Ning Li,
  • Xiao-Hui Li,
  • Wu-Jun Ma,
  • Rudi Appels and
  • Yue-Ming Yan

18 October 2012

The relationship between chromosome deletion in wheat and protein expression were investigated using Chinese Spring and fine deletion line 3BS-8. Through 2-DE (2-D electrophoresis) analysis, no differentially expressed proteins (DEPs) were found in l...

  • Review
  • Open Access
174 Citations
14,717 Views
24 Pages

18 October 2012

MicroRNAs (miRNAs) are a major class of small, noncoding RNA molecules that regulate gene expression by targeting mRNAs to trigger either translational repression or mRNA degradation. They have recently been more widely investigated due to their pote...

  • Article
  • Open Access
8 Citations
6,553 Views
14 Pages

Improved Production of Cyclodextrins by Alkalophilic Bacilli Immobilized on Synthetic or Loofa Sponges

  • Tieles Carina De Oliveira Delani,
  • Rúbia Pazzetto,
  • Camila Sampaio Mangolim,
  • Vanderson Carvalho Fenelon,
  • Cristiane Moriwaki and
  • Graciette Matioli

17 October 2012

This study aimed to improve the production of β-cyclodextrin (β-CD) by microbial cells immobilized on synthetic or loofa sponges both with and without the use of alginate or chitosan. The most suitable matrix for the immobilization of Bacillus firmus...

  • Article
  • Open Access
103 Citations
14,497 Views
14 Pages

ABO Blood Group System and Gastric Cancer: A Case-Control Study and Meta-Analysis

  • Zhiwei Wang,
  • Lei Liu,
  • Jun Ji,
  • Jianian Zhang,
  • Min Yan,
  • Jun Zhang,
  • Bingya Liu,
  • Zhenggang Zhu and
  • Yingyan Yu

17 October 2012

This study focuses on the association between the ABO blood group system and the risk of gastric cancer or Helicobacter pylori infection. The data for the ABO blood group was collected from 1045 cases of gastric cancer, whereby the patient underwent...

  • Review
  • Open Access
9 Citations
6,803 Views
16 Pages

Histone Displacement during Nucleotide Excision Repair

  • Christoffel Dinant,
  • Jiri Bartek and
  • Simon Bekker-Jensen

17 October 2012

Nucleotide excision repair (NER) is an important DNA repair mechanism required for cellular resistance against UV light and toxic chemicals such as those found in tobacco smoke. In living cells, NER efficiently detects and removes DNA lesions within...

  • Review
  • Open Access
141 Citations
11,023 Views
24 Pages

The Behavior of Matrix Metalloproteinases and Their Inhibitors in Colorectal Cancer

  • László Herszényi,
  • István Hritz,
  • Gábor Lakatos,
  • Mária Zsófia Varga and
  • Zsolt Tulassay

16 October 2012

Matrix metalloproteinases (MMPs) play an important role in the degradation of extracellular matrix components crucial for tumor growth, invasion and metastasis. MMPs are controlled by natural inhibitors called tissue inhibitors of metalloproteinases...

  • Article
  • Open Access
45 Citations
7,389 Views
11 Pages

16 October 2012

Semaphorin4D (SEMA4D) has been regarded as an important protein in tumor angiogenesis, though originally identified in neurodevelopment. SEMA4D is extensively expressed in several malignant solid tumors. Nevertheless, the function and expression of S...

  • Article
  • Open Access
235 Citations
20,006 Views
19 Pages

16 October 2012

ZnO nanostructures were synthesized by hydrothermal method using different molar ratios of cetyltrimethylammonium bromide (CTAB) and Sodium dodecyl sulfate (SDS) as structure directing agents. The effect of surfactants on the morphology of the ZnO cr...

  • Article
  • Open Access
23 Citations
9,760 Views
20 Pages

15 October 2012

The ruthenium-based complex [Ru(η6-p-phenylethacrynate)Cl2(pta)] (pta = 1,3,5-triaza-7-phosphatricyclo-[3.3.1.1]decane), termed ethaRAPTA, is an interesting antitumor compound. The elucidation of the molecular mechanism of drug activity is centra...

  • Short Note
  • Open Access
5 Citations
5,616 Views
9 Pages

15 October 2012

We described and characterized 11 expressed sequence tag (EST)-derived simple sequence repeats (SSR) and seven genomic (G)-derived SSRs in Coreoperca whiteheadi Boulenger. The EST-SSRs comprised 62.2% di-nucleotide repeats, 32.2% tri-nucleotide repea...

  • Article
  • Open Access
21 Citations
7,676 Views
15 Pages

15 October 2012

An heterologous expression of Vitreoscilla hemoglobin (VHb) for improving cell growth and recombinant protein production has been successfully demonstrated in various hosts, including Pichia pastoris. Lower temperature cultures can enhance target pro...

  • Review
  • Open Access
63 Citations
8,209 Views
13 Pages

MicroRNAs as Active Players in the Pathogenesis of Multiple Sclerosis

  • Chiara Fenoglio,
  • Elisa Ridolfi,
  • Daniela Galimberti and
  • Elio Scarpini

15 October 2012

MicroRNAs (miRNAs) are a recently discovered group of small noncoding RNAs that regulate gene expression post-transcriptionally. They are highly expressed in cells of the immune system, as well as in the central nervous system, and they are deregulat...

  • Article
  • Open Access
63 Citations
9,211 Views
14 Pages

12 October 2012

Supercritical carbon dioxide (SC-CO2) extraction of flavonoids from pomelo (Citrus grandis (L.) Osbeck) peel and their antioxidant activity were investigated. Box-Behnken design combined with response surface methodology was employed to maximize the...

  • Article
  • Open Access
18 Citations
9,402 Views
25 Pages

12 October 2012

The Asian rice gall midge (Orseolia oryzae) is a major pest responsible for immense loss in rice productivity. Currently, very little knowledge exists with regard to this insect at the molecular level. The present study was initiated with the aim of...

  • Review
  • Open Access
71 Citations
11,831 Views
14 Pages

12 October 2012

When cellular reducing enzymes fail to shield the cell from increased amounts of reactive oxygen species (ROS), oxidative stress arises. The redox state is misbalanced, DNA and proteins are damaged and cellular transcription networks are activated. T...

  • Article
  • Open Access
9 Citations
6,607 Views
16 Pages

Inhibition of Enzyme Activity of Rhipicephalus (Boophilus) microplus Triosephosphate Isomerase and BME26 Cell Growth by Monoclonal Antibodies

  • Luiz Saramago,
  • Mariana Franceschi,
  • Carlos Logullo,
  • Aoi Masuda,
  • Itabajara Da Silva Vaz,
  • Sandra Estrazulas Farias and
  • Jorge Moraes

12 October 2012

In the present work, we produced two monoclonal antibodies (BrBm37 and BrBm38) and tested their action against the triosephosphate isomerase of Rhipicephalus (Boophilus) microplus (RmTIM). These antibodies recognize epitopes on both the native and re...

  • Communication
  • Open Access
21 Citations
6,982 Views
6 Pages

12 October 2012

nc886 (= pre-miR-886 or vtRNA2-1) is a non-coding RNA that has been recently identified as a natural repressor for the activity of PKR (Protein Kinase R). The suppression of nc886 activates PKR and thereby provokes a cell death pathway. When combined...

  • Article
  • Open Access
8 Citations
7,589 Views
10 Pages

Optimization of Lipase-Mediated Synthesis of 1-Nonene Oxide Using Phenylacetic Acid and Hydrogen Peroxide

  • Emilia Abdulmalek,
  • Mahashanon Arumugam,
  • Mahiran Basri and
  • Mohd Basyaruddin Abdul Rahman

12 October 2012

Herein, an efficient epoxidation of 1-nonene is described. In a simple epoxidation system, commercially available Novozym 435, an immobilized Candida antarctica lipase B, and hydrogen peroxide (H2O2) were utilized to facilitate the in situ oxidation...

  • Article
  • Open Access
12 Citations
8,457 Views
19 Pages

12 October 2012

To provide a resource of sisal-specific expressed sequence data and facilitate this powerful approach in new gene research, the preparation of normalized cDNA libraries enriched with full-length sequences is necessary. Four libraries were produced wi...

  • Article
  • Open Access
17 Citations
6,743 Views
14 Pages

Lower Salinomycin Concentration Increases Apoptotic Detachment in High-Density Cancer Cells

  • Ju-Hwa Kim,
  • Tae Young Kim,
  • Hyung Sik Kim,
  • Suntaek Hong and
  • Sungpil Yoon

12 October 2012

The present study identified a novel salinomycin (Sal) sensitization mechanism in cancer. We tested whether Sal reduced proliferation in a high-density population by counting attached cell numbers after Sal treatment. Sal reduced proliferation in hig...

  • Review
  • Open Access
55 Citations
13,017 Views
24 Pages

Molecular Pathogenesis of Neuromyelitis Optica

  • Wajih Bukhari,
  • Michael H Barnett,
  • Kerri Prain and
  • Simon A Broadley

11 October 2012

Neuromyelitis optica (NMO) is a rare autoimmune disorder, distinct from multiple sclerosis, causing inflammatory lesions in the optic nerves and spinal cord. An autoantibody (NMO IgG) against aquaporin-4 (AQP4), a water channel expressed on astrocyte...

  • Article
  • Open Access
13 Citations
9,823 Views
18 Pages

11 October 2012

Ornithine cyclodeaminase (OCD) is an NAD+-dependent deaminase that is found in bacterial species such as Pseudomonas putida. Importantly, it catalyzes the direct conversion of the amino acid L-ornithine to L-proline. Using molecular dynamics (MD) and...

  • Article
  • Open Access
57 Citations
8,672 Views
18 Pages

Transcriptomic Analysis of Phenotypic Changes in Birch (Betula platyphylla) Autotetraploids

  • Huai-Zhi Mu,
  • Zi-Jia Liu,
  • Lin Lin,
  • Hui-Yu Li,
  • Jing Jiang and
  • Gui-Feng Liu

11 October 2012

Plant breeders have focused much attention on polyploid trees because of their importance to forestry. To evaluate the impact of intraspecies genome duplication on the transcriptome, a series of Betula platyphylla autotetraploids and diploids were ge...

  • Article
  • Open Access
9 Citations
8,113 Views
19 Pages

Binding of the Phage Display Derived Peptide CaIX-P1 on Human Colorectal Carcinoma Cells Correlates with the Expression of Carbonic Anhydrase IX

  • Vasileios Askoxylakis,
  • Volker Ehemann,
  • Shoaib Rana,
  • Susanne Krämer,
  • Nuh N. Rahbari,
  • Jürgen Debus and
  • Uwe Haberkorn

11 October 2012

Phage display represents an attractive screening strategy for the identification of novel, specific binding ligands that could be used for tumor targeting. Recently, a new peptide (CaIX-P1) with affinity for human carbonic anhydrase IX (CAIX) was ide...

  • Article
  • Open Access
91 Citations
10,418 Views
16 Pages

Formulation Optimization of a Palm-Based Nanoemulsion System Containing Levodopa

  • Syafinaz Zainol,
  • Mahiran Basri,
  • Hamidon Bin Basri,
  • Ahmad Fuad Shamsuddin,
  • Siti Salwa Abdul-Gani,
  • Roghayeh Abedi Karjiban and
  • Emilia Abdul-Malek

11 October 2012

Response surface methodology (RSM) was utilized to investigate the influence of the main emulsion composition; mixture of palm and medium-chain triglyceride (MCT) oil (6%–12% w/w), lecithin (1%–3% w/w), and Cremophor EL (0.5%–1.5% w/w) as well as the...

  • Review
  • Open Access
23 Citations
8,502 Views
14 Pages

10 October 2012

Successful nerve regeneration after nerve trauma is not only important for the restoration of motor and sensory functions, but also to reduce the potential for abnormal sensory impulse generation that can occur following neuroma formation. Satisfying...

  • Review
  • Open Access
19 Citations
5,895 Views
14 Pages

10 October 2012

The present study investigated the expression and clinical role of hyaluronan synthases (HAS1-3) and hyaluronidases (Hyal1-3) in serous ovarian carcinoma. HAS and HYAL mRNA expression was analyzed in 97 tumors (61 effusions, 27 primary carcinomas, 9...

  • Article
  • Open Access
41 Citations
9,214 Views
13 Pages

Erythropoietin Modulates Autophagy Signaling in the Developing Rat Brain in an In Vivo Model of Oxygen-Toxicity

  • Ivo Bendix,
  • Corina Schulze,
  • Clarissa von Haefen,
  • Alexandra Gellhaus,
  • Stefanie Endesfelder,
  • Rolf Heumann,
  • Ursula Felderhoff-Mueser and
  • Marco Sifringer

10 October 2012

Autophagy is a self-degradative process that involves turnover and recycling of cytoplasmic components in healthy and diseased tissue. Autophagy has been shown to be protective at the early stages of programmed cell death but it can also promote apop...

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Int. J. Mol. Sci. - ISSN 1422-0067