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18 March 2026

Herbal Textual Research, Phytochemistry, Pharmacology and Toxicity of Atractylodis Rhizoma: A Comprehensive Review

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1
School of Chinese Medicine, Bozhou University, Bozhou 236800, China
2
School of Medicine, Changchun Sci-Tech University, Changchun 130600, China
3
School of Pharmaceutical Sciences, Changchun University of Chinese Medicine, Changchun 130117, China
*
Authors to whom correspondence should be addressed.

Abstract

This review examines the historical development, ethnopharmacology, traditional applications, phytochemistry, and pharmacological attributes of Atractylodis Rhizoma (AR). Data were collected from a range of electronic databases, academic libraries, and classical literature. In China, AR is highly valued for its medicinal properties. Research has identified 327 compounds, including sesquiterpenes, triterpenes, flavonoids, and phenolics, which contribute to its diverse pharmacological activities, such as antimicrobial, anti-inflammatory, antioxidant, hepatoprotective, and neuroprotective effects. AR is particularly effective in treating modern gastrointestinal disorders and influenza. As a traditional herb with a rich historical background, AR exhibits significant therapeutic potential. This review aims to correlate its active components with its primary therapeutic effects and highlight existing research gaps. Current studies primarily focus on extraction methods and pharmacodynamics. Future research should employ multi-omics and molecular biology techniques to further elucidate active components and their targets, while also addressing the challenge of low bioavailability.

1. Introduction

Atractylodis Rhizoma (AR) is a pivotal herb in Traditional Chinese Medicine [1], esteemed for its effectiveness in alleviating dampness, fortifying the spleen, dispelling wind and cold, and enhancing vision (Figure 1). Its historical utilization can be traced back to the Erya (1st–2nd century AD), which documented its properties and nomenclature [2]. Shennong’s Herbal Classic classified it as a “superior” herb for the treatment of wind-cold-damp arthralgia, convulsions, and jaundice [3]. However, herbal texts from the Han and Wei dynasties and earlier periods did not differentiate between AR (Cang-Zhu) and Atractylodis Macrocephalae Rhizoma (Bai-Zhu) [4], referring to both simply as Zhu. It was only after the Ben Cao Jing Ji Zhu that these terms began to be used distinctively. Throughout history, numerous classic formulas have employed Cang-Zhu and Bai-Zhu, such as Wan Dai Decoction [5], Ling Gui Zhu Gan Decoction [6], Ping Wei Powder [7], and Wei Ling Decoction [8]. To prevent confusion and misuse, conducting thorough herbal verification is particularly crucial. The Atractylodis genus primarily includes A. carlinoides (Hand. -Mazz.) Kitam., A. coreana (Nakai) Kitam., A. japonica Koidz. ex Kitam., A. lancea (Thunb.) DC., A. chinensis (DC.) Koidz., and A. macrocephala Koidz., primarily distributed throughout eastern Asia. A. lancea (Thunb.) DC. (Mao-Cang-Zhu) or A. chinensis (DC.) Koidz (Bei-Cang-Zhu) are the two sources of AR, distributed in Shandong, Jiangsu, Zhejiang, Hubei, Sichuan, and other regions of China [9].
Figure 1. The Historical Application of Atractylodis Rhizoma. Note: Different colors represent different periods: yellow represents the period when the term first originated; green represents the period when species began to be distinguished; orange represents the period of widespread use; and blue represents the period of modern research.
Significant progress has been made in the isolation, identification, and investigation of potential pharmacological activities of AR compounds [10,11]. While extensive research exists on A. lancea, reports on A. chinensis remain scarce. Given the expanding demand for AR, it is gradually gaining greater attention. A review article published in 2021 systematically summarized the botanical characteristics, traditional uses, phytochemical composition, pharmacological effects, and quality control standards of AR [12]. However, comprehensive research on the structural composition of compounds in AR and their potential mechanisms of action remains insufficient to date.
Against this backdrop, a comprehensive review and analysis of AR is urgently needed. This study begins with the traditional usage of AR, integrates findings from modern technological discoveries, and comprehensively examines the connections and distinctions between traditional applications and contemporary uses. It aims to provide a reference and basis for AR research, offering insights for innovative studies and comprehensive collation of similar Chinese herbal medicines.

2. Materials and Methods

2.1. Search Strategy

A comprehensive online literature search was conducted across multiple databases, including ScienceDirect, Google Scholar, PubMed, Web of Science, CNKI, WFO, MPNS, the Changchun University of Chinese Medicine Library collections, and SciFinder, covering the period from 1996 to 2026. For the methodology outlined in reference [13], the search employed the keywords “Atractylodis Rhizoma” in conjunction with “phytochemistry”, “pharmacology”, or “toxicity”. The references of all retrieved articles were meticulously reviewed to ensure the inclusion of pertinent literature. Uniform selection criteria were consistently applied across all databases, and duplicate studies were systematically eliminated through a two-step process involving automated detection via Zotero 7, followed by manual cross-verification. Additionally, traditional and historical applications were corroborated through a systematic analysis of classical Chinese medical texts. The search strategy comprehensively covered medicinal and dietary records using the nomenclature “Cang Zhu,” “Zhu,” “Ji,” “Shan Ji,” “Tian Su,” and “Yang Bao.” Relevant prescriptions were compiled after the removal of duplicates through cross-database verification.

2.2. Selection Criteria

The inclusion criteria for this study are delineated as follows: the primary focus is on AR, including its extracts and constituent compounds; the investigation encompasses diseases and physiological processes influenced by AR; the study design must be clearly articulated, with results that explore pertinent mechanisms; the research incorporates the most recent findings on the clinical applications and formulations of AR; only literature published within the last 30 years is considered, except in cases of significant historical relevance; and the research must explicitly detail molecular mechanisms or signaling pathways, along with their impact on bioavailability or efficacy.

2.3. Analytical Methods and Software

The graphical illustrations in this paper were created using multiple software tools, including the Home for Researchers (https://professional.home-for-researchers.com/) and Microsoft PowerPoint 2024 (https://www.microsoft.com/). Visualizations presenting the investigation of classical herbal formulas and their modern pharmaceutical applications were generated with Origin 2024 (https://www.originlab.com/). All chemical structures depicted in this study were drawn using ChemDraw 22.0.0.

3. Herbal Textual Research

3.1. Origin

To elucidate the origin of AR, the morphological records from ancient Chinese herbal texts have been systematically compiled and analyzed, as presented in Table 1. This compilation reveals a progressive refinement in the understanding of this herb, transitioning from an undifferentiated archetype to a pharmacognostically distinct entity. The earliest references, such as the Er Ya from the Warring States period, establish the foundational concept of “Zhu”, associating it with thistle-like plants characterized by elliptical leaves, spiny-toothed margins, and capitate inflorescences—morphological features that precisely align with the Asteraceae family to which Atractylodes genus. This initial ambiguity between Cangzhu and Baizhu reflects a holistic view of the genus before species-level differentiation. The critical shift occurred during the Northern and Southern Dynasties, as documented in the Ben Cao Jing Ji Zhu, where the name “Cangzhu” first appeared alongside explicit descriptions of “slender, branchless leaves” and roots that are “small, bitter, and rich in sap”. The emphasis on “rich in sap” directly corresponds to the high volatile oil content characteristic of A. lancea, distinguishing it organoleptically from the milder Baizhu. This text also anchors the herb geographically to Jiangsu Province, particularly the Maoshan region, establishing a provenance that would persist for centuries as the benchmark for superior quality. Subsequent Ming and Qing dynasties texts refined this knowledge with remarkable precision. The Ben Cao Yuan Shi from the Ming dynasty provides an exemplary pharmacognostic profile, extolling “Maoshan Cangzhu” for its “black bark and yellow flesh dotted with red spots”—a direct observation of oil cavities that remains a key identification marker today. It further distinguishes inferior variants by their larger size and excessively pungent taste, demonstrating a sophisticated understanding of intra-specific variation and quality gradation. The Qing dynasty Ben Cao Chong Yuan adds complementary morphological details, such as leaves near the root dividing into three or five forks and purple stems, traits that align closely with A. chinensis, indicating that while A. lancea from Maoshan was considered supreme, related species were also recognized and utilized under the same nomenclature. Throughout this historical trajectory, the consistent recording of production areas—Jiangsu, Henan, Shaanxi, Zhejiang, Anhui, and Hubei—underscores an early awareness of geo-herbalism, with the persistent emphasis on Jiangsu corroborating modern botanical knowledge that A. lancea thrives in the specific pedological conditions of this region. Collectively, the ancient texts demonstrate a cumulative empirical process: the core thistle-like morphology was established in the Er Ya, the pungent and oily nature characteristic of A. lancea was delineated by the Northern and Southern Dynasties, and the final refinement of quality standards based on organoleptic and physical traits—such as the presence of “oil spots” and “frosting”—was achieved by the Ming and Qing scholars. This 2000-year continuum of observation and documentation provides robust philological and botanical evidence that the primary origin of AR is A. lancea, with A. chinensis serving as a geographically and morphologically distinct variant, thereby affirming the foundational accuracy of Chinese Pharmacognosy.
Table 1. Name, Characteristic traits and Origin of Atractylodis Rhizoma in ancient books.
All prescriptions documented in the Han Dynasty medical text Wu Shi Er Bing Fang employ Zhu. Shennong’s Herbal Classic states: “Zhu, bitter and warm in nature, treats wind-cold-dampness paralysis with deadened muscles, convulsions, jaundice, stops sweating, clears heat, and aids digestion.” Its effectiveness in dispelling wind and eliminating dampness parallels that of modern Cangzhu. Ming Yi Bie Lu notes: “It treats severe wind affecting the body and face, and wind-induced dizziness.” This description of efficacy also corresponds with modern Cangzhu. The aforementioned accounts indicate that medical texts from the Han and Wei dynasties, as well as earlier sources, exclusively documented Zhu. During the Northern and Southern Dynasties, Ben Cao Jing Ji Zhu recorded: “Baizhu has large, hairy leaves that branch out. Its root is sweet with little resin and can be used in pills and powders. Cangzhu has fine leaves without branching, a small root that is bitter with abundant resin, and is suitable for decoctions”. From this point onward, the two varieties of Zhu, Cangzhu and Baizhu, began to be differentiated. During the Song Dynasty, Ben Cao Tu Jing categorized them under the entry Zhu as Cangzhu and Baizhu. Zhu is characterized as follows: “Sprouting in spring, green in color without branches. Also known as Shanji, its leaves resemble thistles. The stem, which is greenish-red, resembles mugwort stalks and can grow to two or three feet in length. It blooms in summer, producing purple-green flowers similar to thistle blossoms, although some may have yellow-white flowers. The plant bears fruit after the summer solstice, and the shoots wither by autumn. Its root resembles ginger, featuring lateral fine roots, black skin, a yellowish-white core, and purple sap”. Based on these morphological descriptions—“yellow-white flowers, root resembling ginger, black skin, yellowish-white core, purple oily sap”—it is clear that Zhu corresponds precisely to the modern plants A. lancea (Mao-Cang-Zhu) or A. chinensis (Bei-Cang-Zhu). Tang Ye Ben Cao of the Yuan Dynasty classifies Baizhu and Cangzhu separately, outlining their distinct functions. According to the Ben Cao Pin Hui Jing Yao from the Ming Dynasty, Cangzhu produces shoots and leaves during spring. The leaves are slim and smooth, growing in pairs opposite each other. The stem resembles wormwood stalks, displaying a greenish-red hue and reaching a length of two to three feet. In the summer, it blossoms with thistle-like flowers in shades of purple and blue. Following the summer solstice, it yields fruit, and as autumn approaches, the shoots wilt. The root resembles ginger but lacks branches, featuring delicate lateral roots. Its skin is black, the flesh is yellow, and the core contains abundant sap. It offers a taste that is bitter, sweet, and pungent. The most esteemed roots are those harvested in spring, autumn, or winter, especially those easily frosted white. The Qing Dynasty’s Ben Cao Chong Yuan provides a detailed account of the stems, leaves, and rhizomes of Cangzhu, stating that near the root of A. chinensis, the leaves divide into three to five forks, with the upper leaves being narrow, elongated, and possessing a green, glossy sheen. The classification standards for Cangzhu and Baizhu during the Qing Dynasty correspond to contemporary norms, where Cangzhu represents a wild variety, while ancient Baizhu encompasses Zhezhu from the Ben Cao Meng Quan and Wuzhu from the Compendium of Materia Medica, both being cultivated types with their cultivation attributed to Tao Hongjing during the Northern and Southern Dynasties. Consequently, the Zhu utilized in the Han Dynasty’s Shang Han Lun should be Cangzhu rather than the subsequently cultivated Baizhu.
Herbal texts prior to the Song Dynasty only documented the regions where Zhu was produced. For instance, the Compendium of Famous Physicians’ Supplementary Records states: “Zhu grows in the valleys of Mount Na, Hanzhong”. The Collected Notes on Ben Cao Jing Ji Zhu states: “It is now found everywhere, but those from Jiangshan, Zishan, and Mount Mao are considered superior.” This indicates that Zhu was produced in Shaanxi and Jiangsu provinces, which remain the primary production areas for Cangzhu today. After the Song Dynasty, ancient herbal texts often distinguished the origins of Cangzhu and Baizhu. For instance, Ben Cao Tu Jing from the Song Dynasty records: “Zhu grows in the valleys of Mountain Zheng, Hanzhong, now known as Shaanxi Province. Now it is found everywhere, with those from Mountain Song and Mountain Mao being the finest”. The Compendium of Materia Medica records: “Cangzhu from Mount Mao is now considered the finest. Its root bark is black with white flesh and yellow spots. Cangzhu from other mountains has larger roots with yellow flesh and a fiercely pungent aroma”. The Republican-era Yao Wu Chan Chu Bian notes: “Tianshengzhu is originally produced in Xiushui County, Jiangxi Province”. As described above, Cangzhu has a broad distribution range. Its earliest recorded origin is Hanzhong, Shaanxi, later gradually expanding to Jiangsu, Henan, and Hubei. The highest quality Cangzhu comes from Mountain Mao, Jiangsu. Currently, it is primarily distributed in Shandong, Jiangsu and Zhejiang, Hubei, Sichuan, and other provinces. With increasing recognition, Bei-Cang-Zhu (A. chinensis) has gradually become mainstream, and its functions and effects are comparable to those of Mao-Cang-Zhu (A. lancea).

3.2. Textual Research of Traditional Ethnopharmacology, Uses and Prescriptions

Ethnopharmacology and ethnic pharmacology are integral components of the theoretical framework of Traditional Chinese Medicine and serve as foundational principles for clinical prescriptions. AR is characterized by its pungent and warm properties, accompanied by a bitter taste, and is associated with the spleen, stomach, and liver meridians. It functions to eliminate dampness, strengthen the spleen, dispel wind, disperse cold, and enhance vision. This herb is predominantly utilized in the treatment of conditions such as dampness obstructing the middle jiao, epigastric and abdominal distension, diarrhea, edema, beriberi paralysis, rheumatic arthralgia, wind-cold common cold, night blindness, and blurred vision.
Upon verification, a total of 197 internal formulas and 3 external formulas were identified, of which 54 formulas incorporated rice water-processed AR to address spleen-stomach disharmony and related conditions (refer to Table S1). An analysis of the historical application of AR (Figure 2) spans six dynasties and six disease categories. The Song Dynasty represents the peak period for AR utilization, with the highest number of formulas (88) and the broadest therapeutic scope, particularly emphasizing gastrointestinal disorders and external pathogen/pain conditions, while ophthalmic formulas also occupied a significant proportion. The Ming Dynasty follows with 24 formulas, where external pathogen/pain applications slightly outnumber gastrointestinal ones, reflecting the continued use of AR in treating rheumatic arthralgia. Although fewer formulas are recorded in the Qing Dynasty, gastrointestinal applications remain dominant. Notably, ophthalmic uses are predominantly concentrated in the Song Dynasty and rarely appear in other periods, possibly due to the extensive inclusion of ophthalmic formulas in the comprehensive text Sheng Ji Zong Lu. These findings demonstrate that AR has been consistently applied to gastrointestinal disorders throughout history, further validating the scientific basis and continuity of its traditionally recognized functions of “drying dampness and strengthening the spleen” that persist in modern clinical practice.
Figure 2. Historical Application of Atractylodis Rhizoma: A Sunburst Diagram of Therapeutic Categories by Dynasty. Note: (1) Inner Ring: Dynasties, arranged in historical sequence including Han, Tang, Song, Yuan, Ming, Qing. (2) Outer Ring: Therapeutic Categories, derived from the “Traditional uses/Efficacy” field in each formula description. Primarily divided into six categories: Gastrointestinal: Addresses spleen-stomach deficiency, diarrhea, vomiting, abdominal distension, etc. External/Pain: Includes typhoid fever, headache, body pain, rheumatism, joint pain, etc. Ophthalmology: Treats redness and swelling of the eyes, corneal opacity, night blindness, etc. Gynecology/Blood: Covers pregnancy, postpartum conditions, blood stasis, etc. Dermatology: Treats sores, hives, scabies, and tinea. Other: Includes tonifying, qi regulation, phlegm-fluid retention, and other non-categorizable uses. (3) Values: Represents the number of formulas in each category per dynasty. The sum equals the total number of formulas for that dynasty. (4) Colors: Different colors represent different dynasties.

3.3. Research on Modern Preparations

AR is renowned for its distinctive therapeutic properties, including the ability to dry dampness, fortify the spleen, dispel wind, and alleviate cold. These properties have been validated through extensive historical use, resulting in the preservation of numerous traditional formulations that persist to the present day. With the progression of modern pharmacology and advancements in Traditional Chinese Medicine, these compound formulations have been further refined and applied (see Table S2). Consequently, a variety of formulations, such as granules, capsules, tablets, and pills, have been developed. These are extensively employed to treat conditions like dampness obstructing the middle burner and spleen-stomach disharmony, effectively drying dampness and enhancing spleen function.
Currently, a statistical analysis of the 54 AR-containing formulations recorded in the Chinese Pharmacopoeia reveals the overall distribution characteristics of this herb in modern patent medicines (Figure 3). The findings demonstrate a pattern characterized by diverse dosage forms, concentrated therapeutic indications, and the integration of traditional and modern pharmaceutical approaches. Pills serve as the core carrier, supporting the extensive application of AR in the digestive, urinary, and rheumatic systems. Meanwhile, modern dosage forms—such as granules, capsules, and tablets—expand the routes of administration and scope of indications while preserving its traditional efficacy. This distribution not only validates the millennium-old medicinal use of AR in a contemporary context but also provides data support and directional guidance for future drug development.
Figure 3. Distribution of Dosage Forms and Therapeutic Categories in Modern Atractylodis Rhizoma-Containing Patent Medicines.

4. Phytochemistry

To date, a total of 327 small molecules have been identified from AR, encompassing a diverse range of structural classes including sesquiterpenoids, mono-terpenoids, polyacetylenes, triterpenoids, phenolic acids, flavonoids, and steroidal compounds [3]. While this extensive inventory provides a valuable foundation, a critical analytical evaluation is necessary to differentiate compounds based on their abundance, biosynthetic origin, and distribution between the two pharmacopoeial species, A. lancea (AL) and A. chinensis (AC). Such stratification enhances our understanding of the chemotaxonomic markers and the true pharmacologically active principles.
From the perspective of relative abundance, the 327 compounds can be stratified into major bioactives (Table 2), minor components, and trace constituents. The primary and most studied components of AR are lipophilic and accumulate in the essential oil and resin, predominantly comprising sesquiterpenoids and polyacetylenes. Among sesquiterpenoids, atractylon, hinesol, β-eudesmol, and the atractylenolides (I, II, III) are consistently reported as the dominant compounds and form the core bioactive foundation for pharmacological effects such as gastroprotection and anti-inflammation [14]. Quantitative analyses have demonstrated that hinesol and β-eudesmol are characteristically high in AL, while atractylon and γ-eudesmol are notably abundant in AC. Polyacetylenes, particularly atractylodin and its derivatives such as atractylodinol, represent another key group of major bioactives with hepatoprotective properties; these compounds are significantly more concentrated in AL compared to AC. In contrast, a substantial portion of the identified compounds—including numerous saturated and unsaturated hydrocarbons (e.g., various alkanes) and many mono- and sesquiterpene hydrocarbons—are present only in trace amounts. While these trace constituents contribute to the complex aromatic profile of the herb, they are unlikely to be primary drivers of its classical therapeutic actions and are more relevant for establishing complete volatile fingerprints for species differentiation or authenticity testing.
A critical assessment of the phytochemical dataset must also consider the distinction between genuine plant metabolites and potential analytical artifacts. The biosynthetic relationship between atractylon and the atractylenolides warrants particular attention. Atractylon is chemically unstable and readily undergoes autoxidation upon exposure to air, light, or heat [15]. Mechanistic studies have elucidated that atractylon undergoes oxidative conversion through a series of reactions involving water addition, ring cleavage, and carboxylation to generate atractylenolide I, which can further transform into atractylenolides II and III. Consequently, while these lactones are certainly present in processed crude drugs, their quantified levels may not fully represent the native metabolic profile of the fresh rhizome, and a proportion of the measured atractylenolides—particularly in dried or aged samples—may be artifacts derived from atractylon oxidation. This phenomenon is further supported by processing studies demonstrating that stir-frying with bran, a common traditional processing method, leads to decreased levels of both sesquiterpenoids and polyacetylenes, likely due to thermal degradation and oxidative transformations [16]. Additionally, the presence of phthalate esters such as diethyl phthalate, diisobutyl phthalate, and bis(2-ethylhexyl) phthalate is a strong indicator of contamination rather than genuine phytochemical production, as these compounds are ubiquitous plasticizers that readily leach from plastic labware and storage containers during analytical workflows [17].
Comparative analysis between the two official species reveals distinct chemical profiles that underpin their differentiation in traditional medicine and necessitate species specification in modern pharmacological research. The most prominent chemotaxonomic difference lies in the dominant sesquiterpenoid patterns: AL is characterized by high concentrations of hinesol, β-eudesmol, and atractylol, whereas AC is defined by its high content of atractylon and γ-eudesmol, with compounds like β-selinene also showing higher relative abundance in AC. Furthermore, AL exhibits significantly higher accumulation of polyacetylenes, particularly atractylodin and acetylatractylodinol, compared to AC, making polyacetylene content a key differentiating factor that may contribute to variations in reported bioactivities such as hepatoprotection. While most of the remaining compounds, especially trace hydrocarbons and ubiquitous fatty acids, are present in both species, certain compounds such as atrachinenins D, E, F, and G have been reported exclusively in AC based on current literature, representing potential unique biomarkers. These clear qualitative and quantitative differences underscore the absolute necessity of specifying the species used in any experimental study to ensure reproducibility and the correct attribution of observed pharmacological effects.
Table 2. Some of the chemical constituents from Atractylodis Rhizoma.
Table 2. Some of the chemical constituents from Atractylodis Rhizoma.
NO.CompoundsStructureALACClassReferences
1α-PineneMolecules 31 01015 i001**Monoterpenoid[18,19]
2Nonane, 2,6-dimethyl-Molecules 31 01015 i002**Alkane[20]
3Decane, 4-methyl-Molecules 31 01015 i003**Alkane[20]
42-HexanoneMolecules 31 01015 i004**Ketone[20]
5α-PhellandreneMolecules 31 01015 i005**Monoterpenoid[21]
6UndecaneMolecules 31 01015 i006**Alkane[20]
73-HexanolMolecules 31 01015 i007**Alcohol[20]
8DodecaneMolecules 31 01015 i008**Alkane[20]
92,6-DimethylundecaneMolecules 31 01015 i009**Alkane[20]
102-HexanolMolecules 31 01015 i010**Alcohol[20]
11TridecaneMolecules 31 01015 i011**Alkane[20]
122,7,10-trimethyl-DodecaneMolecules 31 01015 i012**Alkane[20]
13Silphiperfol-5-eneMolecules 31 01015 i013**Sesquiterpenoid[22]
142-MethyltridecaneMolecules 31 01015 i014**Alkane[20]
15Atrachinenins GMolecules 31 01015 i015/**Sesquiterpenoid[23]
162,6,10-TrimethyltridecaneMolecules 31 01015 i016**Alkane[20]
17TetradecaneMolecules 31 01015 i017**Alkane[20]
18α-GuaieneMolecules 31 01015 i018**Sesquiterpenoid[3]
19PentadecaneMolecules 31 01015 i019**Alkane[20]
20ModepheneMolecules 31 01015 i020**Sesquiterpenoid[24]
21CypereneMolecules 31 01015 i021**Sesquiterpenoid[25]
22β-ElemeneMolecules 31 01015 i022**Sesquiterpenoid[21]
23IsocomeneMolecules 31 01015 i023**Sesquiterpenoid[20]
24β-IsocomeneMolecules 31 01015 i024**Sesquiterpenoid[20]
25CaryophylleneMolecules 31 01015 i025**Sesquiterpenoid[25]
26AciphylleneMolecules 31 01015 i026**Sesquiterpenoid[20]
27β-FameseneMolecules 31 01015 i027**Sesquiterpenoid[20]
28Atrachinenins FMolecules 31 01015 i028/**Sesquiterpenoid[23]
29OctadecaneMolecules 31 01015 i029**Alkane[26]
30HumuleneMolecules 31 01015 i030**Sesquiterpenoid[21]
312-Isopropenyl-4a, 8-dimethyl-1,2,3,4,4a, 5,6,7-octahydronaphthaleneMolecules 31 01015 i031**Sesquiterpenoid[20]
32(+)-Eudesma-4(14),7(11)-dien- 8-oneMolecules 31 01015 i032**Sesquiterpenoid[25]
33IsoborneolMolecules 31 01015 i033**Monoterpenoid[20]
341-Methyl-4-(6-methylhept-5-en-2-yl) cyclohexa-1,3-dieneMolecules 31 01015 i034**Sesquiterpenoid[20]
35Germacrene DMolecules 31 01015 i035**Sesquiterpenoid[27]
36β-selineneMolecules 31 01015 i036***Sesquiterpenoid[21]
372-Cyclohexen-1-ol, 3-methyl-6-(1-methylethyl)-, cis-Molecules 31 01015 i037**Monoterpenoid[20]
38β-CurcumenMolecules 31 01015 i038**Sesquiterpenoid[20]
39Guaia-1 (10),11-dieneMolecules 31 01015 i039**Sesquiterpenoid[20]
402,6-Octadien-1-ol, 3,7-dimethyl-, acetateMolecules 31 01015 i040**Monoterpenoid[25]
41CitronellolMolecules 31 01015 i041**Monoterpenoid[20]
42γ-CadineneMolecules 31 01015 i042**Sesquiterpenoid[21]
43Methyl salicylateMolecules 31 01015 i043**Phenolic ester[20]
44β-SesquiphellandreneMolecules 31 01015 i044**Sesquiterpenoid[25]
45β-VatireneneMolecules 31 01015 i045**Sesquiterpenoid[25]
46α-CurcumeneMolecules 31 01015 i046**Sesquiterpenoid[21]
47EremophileneMolecules 31 01015 i047**Sesquiterpenoid[20]
48cis-SabinolMolecules 31 01015 i048**Monoterpenoid[20]
49γ-ElemeneMolecules 31 01015 i049**Sesquiterpenoid[25]
50NerolMolecules 31 01015 i050**Monoterpenoid[20]
51Heptadecane, 9-hexyl-Molecules 31 01015 i051**Alkane[20]
52Butylated hydroxytolueneMolecules 31 01015 i052**Phenolic antioxidant[20]
53Cedrene epoxideMolecules 31 01015 i053**Sesquiterpenoid[20]
54(3S,3aR,3bR,4S,7R,7aR)-4-Isopropyl-3,7-dimethyloctahydro -1H-cyclopenta[1,3]cyclopropa[1,2]benzen-3-olMolecules 31 01015 i054**Sesquiterpenoid[20]
55trans-LongipinocarveolMolecules 31 01015 i055**Sesquiterpenoid[20]
56NerolidolMolecules 31 01015 i056**Sesquiterpenoid[28]
57Humulene epoxide IIMolecules 31 01015 i057**Sesquiterpenoid[20]
58EpicubenolMolecules 31 01015 i058**Sesquiterpenoid[20]
595-Azulenemethanol, 1,2,3,4,5,6,7,8-octahydro-α,α,3,8-tetramethyl-Molecules 31 01015 i059**Sesquiterpenoid[20]
601 (2H)-Naphthalenone, octahydro-4a, 8a-dimethyl-7-(1-methylethyl)-,[4aR-(4aα,7ß,8aα)]-Molecules 31 01015 i060**Sesquiterpenoid[20]
61AtractylonMolecules 31 01015 i061***Sesquiterpenoid[21]
62γ-eudesmolMolecules 31 01015 i062***Sesquiterpenoid[25]
638,14-CedranoxideMolecules 31 01015 i063**Sesquiterpenoid[20]
64ThymolMolecules 31 01015 i064**Monoterpenoid phenol[25]
65AgarospirolMolecules 31 01015 i065**Sesquiterpenoid[29]
66HinesolMolecules 31 01015 i066***Sesquiterpenoid[21]
67trans-Valerenyl acetateMolecules 31 01015 i067**Sesquiterpenoid[20]
682-methyl-5-(1-methylethyl)-PhenolMolecules 31 01015 i068**Phenolic[20]
69α-BisabololMolecules 31 01015 i069**Sesquiterpenoid[25]
70AtractylolMolecules 31 01015 i070***Sesquiterpenoid[30]
71β-EudesmolMolecules 31 01015 i071***Sesquiterpenoid[21]
723,7-dimethyl-6-Octenoic acidMolecules 31 01015 i072**Monoterpenoid acid[20]
73α-ElemolMolecules 31 01015 i073**Sesquiterpenoid[31]
74NeointermedeolMolecules 31 01015 i074**Sesquiterpenoid[20]
75DehydrofukinoneMolecules 31 01015 i075**Sesquiterpenoid[20]
76Isoaromadendrene epoxideMolecules 31 01015 i076**Sesquiterpenoid[20]
77Juniper camphorMolecules 31 01015 i077**Sesquiterpenoid[3]
782,4-Di-tert-butylphenolMolecules 31 01015 i078**Phenolic[32]
792 (1H) Naphthalenone, 3,5,6,7,8,8a-hexahydro-4,8a-Molecules 31 01015 i079**Sesquiterpenoid[20]
80Aromadendrene oxide-(1)Molecules 31 01015 i080**Sesquiterpenoid[20]
81ValerenolMolecules 31 01015 i081**Sesquiterpenoid[20]
823-Decenoic acidMolecules 31 01015 i082**Fatty acid[20]
83HeneicosaneMolecules 31 01015 i083**Alkane[26]
84SpathulelMolecules 31 01015 i084**Sesquiterpenoid[20]
85Diethyl PhthalateMolecules 31 01015 i085**Phthalate ester (artifact)[33]
861,1,4,7-Tetramethyldecahydro-1H-cyclopropa[e] azulene-4,7-diolMolecules 31 01015 i086**Sesquiterpenoid[20]
87α-SerineneMolecules 31 01015 i087**Sesquiterpenoid[20]
88Caryophyllene oxideMolecules 31 01015 i088**Sesquiterpenoid[21]
89trans-9-Hexadecen-1-olMolecules 31 01015 i089**Fatty alcohol[20]
90Kaur-16-eneMolecules 31 01015 i090**Diterpenoid[20]
913-PhenyltolueneMolecules 31 01015 i091**Aromatic hydrocarbon[20]
924a, 7-Methano-4aH-naphth[1,8a-b] oxirene, octahydro-4,4,8,8-tetramethyl-Molecules 31 01015 i092**Sesquiterpenoid[20]
93(1R,7S, E)-7-Isopropyl-4,10-dimethylenecyclodec-5-enolMolecules 31 01015 i093**Sesquiterpenoid[20]
94Acetic acid n-octadecyl esterMolecules 31 01015 i094**Fatty ester[20]
95Methyl 10-trans, 12-cis- octadecadienoateMolecules 31 01015 i095**Fatty acid methyl ester[20]
96OplopaneMolecules 31 01015 i096**Sesquiterpenoid[20]
97Diisobutyl phthalateMolecules 31 01015 i097**Phthalate ester (artifact)[20]
982aS,3aR,5aS,9bR)-2a, 5a, 9-Trimethyl-2a, 4,5,5a,Molecules 31 01015 i098**Sesquiterpenoid[20]
99CostolMolecules 31 01015 i099**Sesquiterpenoid[20]
100OctacosaneMolecules 31 01015 i100**Alkane[20]
1011-EicosanolMolecules 31 01015 i101**Fatty alcohol[20]
102Valerenyl isovalerateMolecules 31 01015 i102**Sesquiterpenoid ester[20]
103longifolene-(V4)Molecules 31 01015 i103**Sesquiterpenoid[25]
104CryptomeridiolMolecules 31 01015 i104**Sesquiterpenoid[20]
105SpathulenolMolecules 31 01015 i105**Sesquiterpenoid[25]
106Bicyclo[4.4.0]dec-5-ene, 1,5-dimethyl-3-hy-droxy-8-(1-methylene-2-hydroxyethyl-1)-Molecules 31 01015 i106**Sesquiterpenoid[20]
1076-Isopropenyl-4,8a-dimethyl-1,2,3,5,6,7,8,8a-octahydronaphthalene-2,3-diolMolecules 31 01015 i107**Sesquiterpenoid[20]
108n-Hexadecanoic acidMolecules 31 01015 i108**Fatty acid[20]
109AtractylolideMolecules 31 01015 i109**Sesquiterpenoid lactone[34]
110TetratetracontaneMolecules 31 01015 i110**Alkane[20]
111α-CyperoneMolecules 31 01015 i111**Sesquiterpenoid[20]
112SqualeneMolecules 31 01015 i112**Triterpenoid[35]
1136-Octadecenoic acidMolecules 31 01015 i113**Fatty acid[20]
114Bicyclo[3.1.0]hexane, 4-methylene-1-(1-methylethyl)-Molecules 31 01015 i114**Monoterpenoid[36]
115EucalyptolMolecules 31 01015 i115**Monoterpenoid[37]
116γ-TerpineneMolecules 31 01015 i116**Monoterpenoid[26]
117LinaloolMolecules 31 01015 i117**Monoterpenoid[38]
1181,5-Cyclodecadiene, 1,5-dimethyl-8-(1-methylethylidene)-, (E,E)-Molecules 31 01015 i118**Sesquiterpenoid[36]
119β-PineneMolecules 31 01015 i119**Monoterpenoid[21]
120β-PhellandreneMolecules 31 01015 i120**Monoterpenoid[21]
121CampheneMolecules 31 01015 i121**Monoterpenoid[36]
122β-BisaboleneMolecules 31 01015 i122**Sesquiterpenoid[18]
123BenzaldehydeMolecules 31 01015 i123**Aromatic aldehyde[39]
124(S)-(+)-alpha-PhellandreneMolecules 31 01015 i124**Monoterpenoid[36]
125Citronellyl acetateMolecules 31 01015 i125**Monoterpenoid ester[40]
126(-)-Bornyl acetateMolecules 31 01015 i126**Monoterpenoid ester[21]
127Bicyclo[3.1.1]heptane, 6,6-dimethyl-2-methylene-, (1S)-Molecules 31 01015 i127**Monoterpenoid[25]
128Tricyclo[2.2.1.0(2,6)]heptane, 1,7,7-trimethyl-Molecules 31 01015 i128**Monoterpenoid[36]
129Acetophenone, 4′-hydroxy-Molecules 31 01015 i129**Phenolic ketone[36]
130(+)-2-BornanoneMolecules 31 01015 i130**Monoterpenoid ketone[36]
1313-Cyclohexen-1-ol, 4-methyl-1-(1-methylethyl)-, (R)-Molecules 31 01015 i131**Monoterpenoid[36]
1322(1H)-PyridinoneMolecules 31 01015 i132**PHeterocyclic compound[36]
133Acetic acid, 4-methylphenyl esterMolecules 31 01015 i133**Phenolic ester[36]
134L-α-TerpineolMolecules 31 01015 i134**Monoterpenoid[36]
1353-Methyl-4-isopropylphenolMolecules 31 01015 i135**Phenolic[41]
136IsoelemicinMolecules 31 01015 i136**Phenylpropanoid[36]
137FuranodienoneMolecules 31 01015 i137**Sesquiterpenoid[36]
138(1S)-2,6,6-Trimethylbicyclo[3.1.1]hept-2-eneMolecules 31 01015 i138**Monoterpenoid[36]
139Ethanone, 1-(2,4,6-trihydroxyphenyl)-Molecules 31 01015 i139**Phenolic ketone[36]
140Phenol, 2,3,6-trimethyl-Molecules 31 01015 i140**Phenolic[36]
141AtractylodinMolecules 31 01015 i141***Polyacetylene[21]
1423-Methyl-3-buten-1-ol, acetateMolecules 31 01015 i142**Terpene alcohol ester[36]
143α-ThujeneMolecules 31 01015 i143**Monoterpenoid[42]
1443-CareneMolecules 31 01015 i144**Monoterpenoid[21]
1451,3,8-p-MenthatrieneMolecules 31 01015 i145**Monoterpenoid[36]
146CarveolMolecules 31 01015 i146**Monoterpenoid[36]
147Dill etherMolecules 31 01015 i147**Monoterpenoid ether[36]
148trans-Geranic acid methyl esterMolecules 31 01015 i148**Monoterpenoid ester[36]
1493a,7-Methano-3aH-cyclopentacyclooctene, 1,4,5,6,7,8,9,9a-octahydro-1,1,7-trimethyl-, [3aR-(3a.α,7.α,9a.β)]-Molecules 31 01015 i149**Sesquiterpenoid[36]
1502,6-Octadien-1-ol, 3,7-dimethyl-, acetate, (Z)-Molecules 31 01015 i150**Monoterpenoid ester[36]
151Acetic acid, decyl esterMolecules 31 01015 i151**Fatty ester[36]
152(+)-4-CareneMolecules 31 01015 i152**Monoterpenoid[25]
153γ-MuuroleneMolecules 31 01015 i153**Sesquiterpenoid[43]
154(3aR,4R,7R)-1,4,9,9-Tetramethyl-3,4,5,6,7,8-hexahydro-2H-3a,7-methanoazulen-2-oneMolecules 31 01015 i154**Sesquiterpenoid[36]
155Benzimidazo[2,1-a]isoquinolineMolecules 31 01015 i155**Heterocyclic compound[36]
156(4aR,8aR)-5,8a-Dimethyl-3-propan-2-ylidene-1,2,4,4a,7,8-hexahydronaphthaleneMolecules 31 01015 i156**Sesquiterpenoid[36]
157(1R,3aS,8aS)-7-Isopropyl-1,4-dimethyl-1,2,3,3a,6,8a-hexahydroazuleneMolecules 31 01015 i157**Sesquiterpenoid[36]
158ThujopseneMolecules 31 01015 i158**Sesquiterpenoid[25]
159p-Mentha-1,5,8-trieneMolecules 31 01015 i159**Monoterpenoid[36]
1601-Hexen, 2-(p-anisyl)-5-methyl-Molecules 31 01015 i160**Aromatic hydrocarbon[36]
1616,7-Dimethyl-1,2,3,5,8,8a-hexahydronaphthaleneMolecules 31 01015 i161**Sesquiterpenoid[36]
1622,3-Dimethoxy-5-aminocinnamonitrileMolecules 31 01015 i162**Aromatic nitrile[36]
1631-Penten-3-one, 1-(4-methoxyphenyl)-4-methyl-Molecules 31 01015 i163**Aromatic ketone[36]
1644a(2H)-Naphthalenol, 1,3,4,5,6,8a-Hexahydro-4,7-dimethyl-1-(1-methylethyl)-, (1S,4S,4aS,8aR)-Molecules 31 01015 i164**Sesquiterpenoid[36]
165Neoisolongifolene, 8,9-dehydro-Molecules 31 01015 i165**Sesquiterpenoid[36]
1666-Isopropenyl-4,8a-dimethyl-1,2,3,5,6,7,8,8a-octahydro-2-naphthalenyl acetateMolecules 31 01015 i166**Sesquiterpenoid ester[36]
167Bicyclo[3.1.0]hex-2-ene, 4-methylene-1-(1-methylethyl)-Molecules 31 01015 i167**Monoterpenoid[36]
168Benzene, tert-butyl-Molecules 31 01015 i168**Aromatic hydrocarbon[36]
1691-Decen-3-oneMolecules 31 01015 i169**Ketone[36]
170Silphiperfol-5-eneMolecules 31 01015 i170**Sesquiterpenoid[22]
1711,1′-Biphenyl, 2,4,6-trimethyl-Molecules 31 01015 i171**Aromatic hydrocarbon[36]
1724-MethylurazoleMolecules 31 01015 i172**Heterocycle[36]
173(1R,3aS,8aS)-1,4,4,6-Tetramethyl-1,2,3,3a,4,5,7,8-octahydrocyclopenta[c]pentaleneMolecules 31 01015 i173**Sesquiterpenoid[36]
1741,3a,4,5a-Tetramethyl-1,2,3,3a,5a,6,7,8-octahydrocyclopenta[c]pentaleneMolecules 31 01015 i174**Sesquiterpenoid[36]
1759H-Fluorene, 1,9-dimethyl-Molecules 31 01015 i175**Aromatic hydrocarbon[36]
176N-Benzyloxy-2-carbomethoxyaziridineMolecules 31 01015 i176**Heterocycle[36]
177Naphthalene, 2,3,6-trimethyl-Molecules 31 01015 i177**Aromatic hydrocarbon[36]
1782′-EthoxyacetophenoneMolecules 31 01015 i178**Aromatic ketone[36]
179Isobutyric acid, 2-pinen-10-yl esterMolecules 31 01015 i179**Monoterpenoid ester[36]
1804-Methylphenol, isopropyl etherMolecules 31 01015 i180**Phenolic ether[36]
181Benzene, (butoxymethyl)-Molecules 31 01015 i181**Aromatic ether[36]
1829-Dodecen-1-ol, acetate, (E)-Molecules 31 01015 i182**Fatty ester[36]
1835-Decen-1-ol, acetate, (E)-Molecules 31 01015 i183**Fatty ester[36]
184HexanalMolecules 31 01015 i184**Aldehyde[44]
185p-CymeneMolecules 31 01015 i185**Monoterpenoid aromatic[21]
186Furan, 3-(4-methyl-3-pentenyl)-Molecules 31 01015 i186**Furan derivative[36]
187GeraniolMolecules 31 01015 i187**Monoterpenoid[45]
188Octanoic acid, ethyl esterMolecules 31 01015 i188**Fatty ester[36]
1892,6-Octadienal, 3,7-dimethyl-, (E)-Molecules 31 01015 i189**Monoterpenoid aldehyde[36]
190Naphthalene, 1,2,3,4-tetrahydro-1,6-dimethyl-4-(1-methylethyl)-, (1S-cis)-Molecules 31 01015 i190**Sesquiterpenoid[36]
191GuaiolMolecules 31 01015 i191**Sesquiterpenoid[45]
1925-Azulenemethanol, 1,2,3,3a,4,5,6,7-octahydro-α,α,3,8-tetramethyl-, [3S-(3.α,3a.β,5.α)]-Molecules 31 01015 i192**Sesquiterpenoid[36]
193α-CalacoreneMolecules 31 01015 i193**Sesquiterpenoid[36]
1941H-3a,7-Methanoazulene, octahydro-3,8,8-trimethyl-6-methylene-, [3R-(3.α,3a.β,7.β,8a.α)]-Molecules 31 01015 i194**Sesquiterpenoid[36]
195BicyclosesquiphellandreneMolecules 31 01015 i195**Sesquiterpenoid[36]
196Podocarpa-6,13-diene, 13-isopropyl-Molecules 31 01015 i196**Diterpenoid[36]
197Bicyclo[3.1.0]hexan-3-ol, 4-methylene-1-(1-methylethyl)-, acetateMolecules 31 01015 i197**Monoterpenoid ester[36]
198Ethanone, 1,1′,1″-(1,3,5-benzenetriyl)tris-Molecules 31 01015 i198**Aromatic ketone[36]
199Ethanone, 1-(5-methyl-1-phenyl-1H-pyrazol-4-yl)-Molecules 31 01015 i199**Heterocyclic ketone[36]
200Naphthalene, 1,2,4a,5,8,8a-hexahydro-4,7-dimethyl-1-(1-methylethyl)-, (1.α,4a.β,8a.α)-(.+/-.)-Molecules 31 01015 i200**Sesquiterpenoid[36]
201Benzene, 1-methyl-3-(1-methylethyl)-Molecules 31 01015 i201**Aromatic hydrocarbon[36]
2026-Isopropyl-1,4-dimethylnaphthaleneMolecules 31 01015 i202**Aromatic hydrocarbon[36]
203Furan, 2-hexyl-Molecules 31 01015 i203**Furan derivative[36]
204(1S,4S,4aS)-1-Isopropyl-4,7-dimethyl-1,2,3,4,4a,5-hexahydronaphthaleneMolecules 31 01015 i204**Sesquiterpenoid[36]
205Benzene, 1-methyl-4-(1,2,2-trimethylcyclopentyl)-, (R)-Molecules 31 01015 i205**Aromatic hydrocarbon[36]
206Cadina-1(10),6,8-trieneMolecules 31 01015 i206**Sesquiterpenoid[36]
207Bicyclo[5.2.0]nonane, 2-methylene-4,8,8-trimethyl-4-vinyl-Molecules 31 01015 i207**Sesquiterpenoid[36]
208IsoledeneMolecules 31 01015 i208**Sesquiterpenoid[25]
2091,4,7,-Cycloundecatriene, 1,5,9,9-tetramethyl-, Z,Z,Z-Molecules 31 01015 i209**Sesquiterpenoid[36]
210α-CorocaleneMolecules 31 01015 i210**Sesquiterpenoid[36]
211Benzene, 1-ethenyl-3,5-dimethyl-Molecules 31 01015 i211**Aromatic hydrocarbon[36]
212Benzene, 1-methoxy-4-methyl-2-(1-methylethyl)-Molecules 31 01015 i212**Aromatic ether[36]
2133-Cyclohexen-1-one, 2-isopropyl-5-methyl-Molecules 31 01015 i213**Monoterpenoid ketone[36]
2142,2′-Isopropylidenebis(5-methylfuran)Molecules 31 01015 i214**Furan derivative[36]
2153-Acetyl-2,5-dimethylbenzo(b)thiopheneMolecules 31 01015 i215**Heterocycle[36]
216Benzaldehyde, 2,4-dihydroxy-3,6-dimethyl-Molecules 31 01015 i216**Phenolic aldehyde[36]
217β-PanasinseneMolecules 31 01015 i217**Sesquiterpenoid[46]
2182,3-Dimethyl-5-[(methylthio)propyl]pyrazineMolecules 31 01015 i218**Pyrazine derivative[36]
219Tricyclo[4.4.0.02,7]decane, 1-methyl-3-methylene-8-(1-methylethyl)-, stereoisomerMolecules 31 01015 i219**Sesquiterpenoid[36]
220Coumarin, 3,4-dihydro-4,4,6,8-tetramethyl-Molecules 31 01015 i220**Coumarin[36]
2211,4-Methanocycloocta[d]pyridazine, 1,4,4a,5,6,9,10,10a-octahydro-11,11-dimethyl-, (1.α,4.α,4a.α,10a.α)-Molecules 31 01015 i221**Heterocycle[36]
222Dibenzofuran, 2-methoxy-Molecules 31 01015 i222**Furan derivative[36]
2231H-Imidazole, 1-acetyl-Molecules 31 01015 i223**Heterocycle[36]
2244-Formyl-3,5-dimethyl-1H-pyrrole-2-carbonitrileMolecules 31 01015 i224**Heterocycle[36]
225(4R,4aS,6S)-4,4a-Dimethyl-6-(prop-1-en-2-yl)-1,2,3,4,4a,5,6,7-octahydronaphthaleneMolecules 31 01015 i225**Sesquiterpenoid[36]
2263-Isobutyl-4,5-dimethyl-3H-isobenzofuran-1-oneMolecules 31 01015 i226**Phthalide derivative[36]
2274-Acetoxy-3-methoxystyreneMolecules 31 01015 i227**Phenylpropanoid[36]
2282-Acetyl-3,5-dimethylbenzo(b)thiopheneMolecules 31 01015 i228**Heterocycle[36]
2291,3,5-Cycloheptatriene, 2,3,4,5,7,7-hexamethyl-Molecules 31 01015 i229**Troponoid[36]
2301H-1,2,3-TriazoleMolecules 31 01015 i230**Heterocycle[36]
231CarvenoneMolecules 31 01015 i231**Monoterpenoid ketone[47]
2325-Azulenemethanol, 1,2,3,4,5,6,7,8-octahydro-α,α,3,8-tetramethyl-, acetate, [3S-(3.α,5.α,8.α)]-Molecules 31 01015 i232**Sesquiterpenoid ester[36]
233vanillic acidMolecules 31 01015 i233**Phenolic acid[48]
234L-phenylalanineMolecules 31 01015 i234**Amino acid[49]
235quinic acidMolecules 31 01015 i235**Cyclitol carboxylic acid[3]
236D-tryptophanMolecules 31 01015 i236**Amino acid[50]
237(1R, 4S, 6R)-1, 3, 3-trimethyl-2- oxabicyclo[2.2.2]oct-6-yl-6-O-β-D-glucopyranosyl-β-D-glucopyranosideMolecules 31 01015 i237**Monoterpenoid glycoside[51]
2382-(3-isopropyl-4-methyl-pent-3- en-1-ynyl)-2-methyl-cyclobutanoneMolecules 31 01015 i238**Polyacetylene[51]
239citric acidMolecules 31 01015 i239**Organic acid[52]
240neochlorogenic acidMolecules 31 01015 i240**Phenolic acid (chlorogenic acid derivative)[53]
241scopoletinMolecules 31 01015 i241**Coumarin[54]
242chlorogenic acidMolecules 31 01015 i242**Phenolic acid[55]
243atractyloside AMolecules 31 01015 i243**Sesquiterpenoid glycoside[56]
244hymecromoneMolecules 31 01015 i244**Coumarin[57]
245cryptochlorogenin acidMolecules 31 01015 i245**Phenolic acid[58]
246coumaroylquinic acidMolecules 31 01015 i246**Phenolic acid[58]
2475-O-feruloylquinic acidMolecules 31 01015 i247**Phenolic acid[58]
248dihydrosyrindineMolecules 31 01015 i248**Glycosides[58]
249naphthol(1,2)furan-2-oneMolecules 31 01015 i249**Naphthofuran derivative[51]
250rutinMolecules 31 01015 i250**Flavonoid glycoside[59]
251atractylenolide III Molecules 31 01015 i251**Sesquiterpenoid lactone[60]
252vitexinMolecules 31 01015 i252**Flavonoid glycoside[61]
253naringenin chalconeMolecules 31 01015 i253**Flavonoid (chalcone)[62]
254icariside D1Molecules 31 01015 i254**Phenolic glycoside[58]
255atractyloside IMolecules 31 01015 i255**Sesquiterpenoid glycoside[63]
256dehydrocostus lactoneMolecules 31 01015 i256**Sesquiterpenoid lactone[51]
257wogonosideMolecules 31 01015 i257**Flavonoid glycoside[64]
258atractylenolactamMolecules 31 01015 i258**Sesquiterpenoid lactam[65]
259atractylodinolMolecules 31 01015 i259***Polyacetylene[66]
260Atrachinenins EMolecules 31 01015 i260/**Sesquiterpenoid[23]
261(4β,5β,6β,7β)-Aristol-9-en-8-oneMolecules 31 01015 i261**Sesquiterpenoid[51]
262diacetyl-atractylodiolMolecules 31 01015 i262**Polyacetylene derivative[67]
263(4E,6E,12E)-tetradeca-4,6,12- trien-8,10-diyne-1,3-diyl diacetateMolecules 31 01015 i263**Polyacetylene ester[51]
264AcetyltetraloneMolecules 31 01015 i264**Aromatic ketone[51]
2659a-hydroxy-3,8a-dimethyl-5-methylene-2-oxo-2, 4, 4a, 5, 6, 7, 8, 8a, 9,9a-decahydronaphtho [2,3-b]furan-6-yl acetateMolecules 31 01015 i265**Sesquiterpenoid lactone[51]
2662-(biphenyl-4-yl)acetaldehydeMolecules 31 01015 i266**Aromatic aldehyde[42]
2673β-acetoxyatractylonMolecules 31 01015 i267**Sesquiterpenoid[51]
268atractylenolide II Molecules 31 01015 i268**Sesquiterpenoid lactone[60]
269atractyloside HMolecules 31 01015 i269**Sesquiterpenoid glycoside[58]
270acetylatractylodinolMolecules 31 01015 i270***Polyacetylene ester[68]
271atractylenolide I Molecules 31 01015 i271**Sesquiterpenoid lactone[21]
2723β-hydroxyatractylonMolecules 31 01015 i272**Sesquiterpenoid[58]
273α-cyperoneMolecules 31 01015 i273**Sesquiterpenoid[69]
2749,10-epoxy-12(Z)-octadecenoic acidMolecules 31 01015 i274**Fatty acid epoxide[51]
275(4E,6E,12E)-tetradecadiene-8,10-diyne-1, 3-diol-diacetateMolecules 31 01015 i275**Polyacetylene ester[51]
276methyllinolenateMolecules 31 01015 i276**Fatty acid methyl ester[51]
277musconeMolecules 31 01015 i277**Macrocyclic ketone[51]
2787-methoxy-2-methyl-2-(4- methylpent-3-enyl)-2H- chromeneMolecules 31 01015 i278**Chromene derivative[51]
2799, 12-octadecadienoic acidMolecules 31 01015 i279**Fatty acid[70]
280palmitic acidMolecules 31 01015 i280**Fatty acid[71]
281α-MuuroleneMolecules 31 01015 i281**Sesquiterpenoid[72]
282δ-CadineneMolecules 31 01015 i282**Sesquiterpenoid[21]
283NaphthaleneMolecules 31 01015 i283**Aromatic hydrocarbon[72]
284AristoloneMolecules 31 01015 i284**Sesquiterpenoid[72]
285SyringinMolecules 31 01015 i285**Phenolic glycoside[73]
286Undecanedioic acidMolecules 31 01015 i286**Dicarboxylic acid[74]
287ParthenolideMolecules 31 01015 i287**Sesquiterpenoid lactone[74]
288Valerenic acidMolecules 31 01015 i288**Sesquiterpenoid acid[75]
2893-methyl-1-phenylpent-1-yn-3-olMolecules 31 01015 i289**Aromatic alcohol[74]
290α-Cyclohexylmandelic acidMolecules 31 01015 i290**Aromatic acid[74]
29111-propan-2-ylidenetricyclo[4.3.1.12,5]undec-3-en-10-oneMolecules 31 01015 i291**Sesquiterpenoid[74]
292Hydroxyvalerenic acidMolecules 31 01015 i292**Sesquiterpenoid acid[74]
2933,5-ditert-butylbenzene-1,2-diolMolecules 31 01015 i293**Phenolic[74]
294Senkyunolide AMolecules 31 01015 i294**Phthalide[74]
295NootkatoneMolecules 31 01015 i295**Sesquiterpenoid ketone[74]
29612,13-dihydroxy-9Z-octadecenoic acidMolecules 31 01015 i296**Fatty acid[74]
2972-hydroxyfluoreneMolecules 31 01015 i297**Phenolic[26]
298IsoalantolactoneMolecules 31 01015 i298**Sesquiterpenoid lactone[74]
299XanthydrolMolecules 31 01015 i299**Xanthene derivative[74]
300Bis (4-methoxyphenyl) methanolMolecules 31 01015 i300**Aromatic alcohol[74]
3011-naphthalenemethanolMolecules 31 01015 i301**Aromatic alcohol[74]
3022-methylbenzhydrolMolecules 31 01015 i302**Aromatic alcohol[74]
3033,3′,5,5′-tetramethyldiphenoquinoneMolecules 31 01015 i303**Quinone[74]
304(cis+trans)-nerodilolMolecules 31 01015 i304**Sesquiterpenoid[74]
305GermacroneMolecules 31 01015 i305**Sesquiterpenoid[74]
3061-palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamineMolecules 31 01015 i306**Phospholipid[74]
3071,3-benzenediol, 5-methyl-2-[(1R,6R)-3-methyl-6- (1-methylethenyl)-2-cyclohexen-1-yl]Molecules 31 01015 i307**Phenolic sesquiterpenoid[74]
3081-oleoyl-L-α-lysophosphatidic acidMolecules 31 01015 i308**Phospholipid[74]
3092-hydroxypalmitic acidMolecules 31 01015 i309**Fatty acid[74]
310OleamideMolecules 31 01015 i310**Fatty amide[74]
3119E,11E-octadecadienoic acidMolecules 31 01015 i311**Fatty acid[74]
3121,2-benzenedicarboxylic acidMolecules 31 01015 i312**Phthalic acid (artifact)[74]
313Bis (2-ethylhexyl) phthalateMolecules 31 01015 i313**Phthalate ester (artifact)[74]
314TerpinoleneMolecules 31 01015 i314**Monoterpenoid[21]
3151-methyl-4-(1-methylethyl)-2-cyclohexen-1-olMolecules 31 01015 i315**Monoterpenoid[76]
316(1R,3R,5R)-1-Isopropyl-4-methylenebicyclo[3.1.0]hexan-3-olMolecules 31 01015 i316**Monoterpenoid[76]
317Methyl geraniateMolecules 31 01015 i317**Monoterpenoid ester[76]
318Silphiperfol-5-eneMolecules 31 01015 i318**Sesquiterpenoid[76]
319δ-ElemeneMolecules 31 01015 i319**Sesquiterpenoid[21]
3207-epi-Silphiperfol-5-eneMolecules 31 01015 i320**Sesquiterpenoid[76]
321SilphineneMolecules 31 01015 i321**Sesquiterpenoid[76]
322γ-selineneMolecules 31 01015 i322**Sesquiterpenoid[25]
3231-Naphthalenol, 1,2,3,4,4a,5,6,7-octahydro-4a,5-dimethyl-3-(1-methylethenyl)-Molecules 31 01015 i323**Sesquiterpenoid[76]
3247-epi-alpha-eudesmolMolecules 31 01015 i324**Sesquiterpenoid[76]
325β-guaieneMolecules 31 01015 i325**Sesquiterpenoid[3]
326valenceneMolecules 31 01015 i326**Sesquiterpenoid[77]
327Atrachinenins DMolecules 31 01015 i327/**Sesquiterpenoid[23]
Note: (1) **: High relative content in the species. (2) *: Present but with lower or unspecified relative content. (3) /: Not reported or considered absent in the species. (4) AL: Atractylodes lancea; AC: Atractylodes chinensis.

5. Pharmacology

5.1. Antimicrobial Effect

AR exhibits notable antimicrobial properties, particularly against bacteria, parasites, and viruses, as illustrated in Table S3 and Figure 4. Studies have demonstrated that the chloroform extract of AR significantly impedes the adhesion and invasion capabilities of Salmonella typhimurium in vitro [78]. A primary factor contributing to the pronounced antibacterial activity of AR is its high concentration of sesquiterpene compounds, such as cyperene, caryophyllene, aciphyllene, and humulene, among others. The antibacterial efficacy of AR is characterized by a multi-mechanism synergistic pattern at both molecular and cellular levels, with its material basis primarily attributed to a diverse array of sesquiterpene compounds. These components interfere with the survival and pathogenic processes of pathogens through distinct molecular pathways, thereby establishing a broad-spectrum antimicrobial system with potential synergistic effects. The core mechanism of its action involves two principal aspects. Firstly, it directly disrupts microbial cell membranes by increasing membrane permeability through the insertion of hydrophobic compounds [79,80]. This disruption results in intracellular electrolyte leakage, the collapse of the transmembrane proton gradient, the efflux of cellular contents, and ultimately, cell death. Additionally, it targets critical enzymes and the synthesis of biomacromolecules. Research has demonstrated that germacrene D (35) effectively inhibits Staphylococcus aureus by strongly binding to tyrosyl-tRNA synthetase and topoisomerase II, thereby obstructing protein synthesis and DNA replication [81]. Similarly, molecular docking studies predict that humulene (30) acts on DNA gyrase, disrupting bacterial DNA supercoiling [82]. Furthermore, it interferes with quorum sensing and the expression of virulence factors. For example, α-thujene (143) exhibits high affinity for the virulence regulatory proteins LasR and PqsR in Pseudomonas aeruginosa, suggesting its potential to impede bacterial quorum sensing, weaken biofilm formation, and reduce virulence as an anti-virulence agent [83]. Notably, certain components of AR, such as cyperene (21), have been identified for their potential to enhance overall antibacterial efficacy by promoting synergistic interactions among various constituents [84]. Although the aforementioned approach yielded favourable results, the mechanisms described were predominantly derived through virtual screening and computer-aided simulations, necessitating further validation. This finding presents a fresh perspective on tackling the issue of antibiotic resistance frequently linked with single-target antibiotics.
Figure 4. Schematic Diagram of the Antimicrobial Mechanism of Atractylodis Rhizoma. Note: The arrows in the figure indicate interactions; the red areas represent M1 macrophages, and the green areas represent M2 macrophages. In addition, the first row in the upper left corner represents the effects of AR on microorganisms; the second row shows bacterial DNA and proteins; and the third row depicts the disruption of bacterial internal structures. In the right-hand diagram, the small blue spheres in the center represent chemokines, and the bottom row illustrates phagocytosis by macrophages.
The structure-activity relationships of the active ingredients and their in vivo transformations remain inadequately understood. The majority of research has focused on crude extracts or component mixtures, which complicates the identification of individual contributions. Furthermore, the extrapolation of in vitro antimicrobial activity to in vivo efficacy is constrained by the pharmacokinetic properties and chemical stability of the components, resulting in a substantial deficiency of pertinent data. Consequently, future research should progress beyond mere characterization screening to include experimental validation at functional targets, efficacy evaluation in drug-resistant bacterial models, and rational design based on pharmacophores. This comprehensive approach will facilitate the conversion of the antibacterial potential of AR into novel anti-infective drugs with well-defined mechanisms and clinical translational value.
Beyond its antibacterial properties, AR exhibits diverse biological activities in both antiviral and antiparasitic contexts. Its mechanisms of action encompass various stages of the viral life cycle and critical physiological processes in parasites. Regarding antiviral activity, the active components demonstrate stage-specific intervention capabilities: β-pinene (119) directly influences the adsorption and replication processes of adenovirus type 3 [85]; furanodienone (137) may provide protective effects during the initial phases of viral infection by modulating cell membrane integrity or preserving intracellular reducing conditions [86]; quinic acid (235) derivatives selectively inhibit the intracellular replication of dengue virus without interfering with viral entry [87]; and atractyloside A (243) induces an antiviral immune response by activating the host’s type I interferon signaling pathway (Table S3) [88]. These findings indicate that the antiviral properties of AR exhibit dual characteristics: direct viral suppression and modulation of the host immune response. In terms of antiparasitic activity, component 1-eicosanol (101) demonstrates acaricidal properties that may be associated with its interference in the mite nervous system or its regulation of body wall osmotic pressure [89]. This discovery presents a promising candidate molecule for the development of plant-derived acaricides. However, research in this area is still in the active screening phase, with mechanisms of action primarily based on speculation. Systematic evaluations concerning target confirmation, in vivo efficacy, and environmental safety are currently insufficient. Future investigations should prioritize cross-species and multi-model studies to clarify the specific molecular targets that underlie its antiviral and antiparasitic effects. Furthermore, the potential synergistic effects of its antibacterial components in addressing complex infections or vector-borne diseases warrant exploration. This comprehensive approach will elucidate the scientific value of AR as a multi-target anti-infective medicinal resource.

5.2. Anti-Inflammatory Effect

Inflammation is a multifaceted biological response of the body to external stimuli or injury, involving the orchestrated activity of immune cells [90], blood vessels [91], and molecular mediators [92]. It is intricately linked to cell death and significantly influences the development and advancement of prevalent diseases such as cancer [93,94]. Consequently, the development of safe and potent anti-inflammatory medications is crucial. Presently, extensive research is concentrating on the anti-inflammatory properties of individual natural compounds. These compounds exhibit anti-inflammatory actions by inhibiting LOX, suppressing NF-κB or MAPK signaling pathways, and decreasing cytokines like TNF-α and IL-6. Nonetheless, their efficacy is frequently confined to specific targets or models, lacking a systematic, comprehensive regulation of the inflammatory network. To overcome this limitation, Traditional Chinese Medicine, known for its multi-component synergistic effects, presents a distinctive opportunity. As a case in point, AR emerges as a focal point of research, where its diverse array of compounds collectively establish a highly efficient anti-inflammatory network.
The anti-inflammatory effects of AR arise from the synergistic integration of its diverse active constituents (refer to Table S4 and Figure 5). For example, the organic acid component, cryptochlorogenic acid (compound 245), has been shown to effectively inhibit the expression of COX-2 and iNOS, while also blocking the activation of the MAPK signaling pathway [95]. Additionally, the terpenoid component, Terpinen-4-ol (compound 131), significantly suppresses the production of pro-inflammatory cytokines, such as TNF-α and IL-6, in macrophages, through the regulation of the MAPK pathway [96]. These principal compounds, in conjunction with polysaccharides and other constituents, concurrently target multiple critical nodes within the inflammatory response. They achieve this by reducing the release of pro-inflammatory factors via inhibition of the TLR4/NF-κB pathway, mitigating oxidative stress through activation of the Nrf2/HO-1 pathway, and modulating interactions between gut microbiota and immune cells. This results in multidimensional regulation of both mucosal immunity and systemic inflammation. This multi-targeted, multi-pathway action model, supported by multiple specific compounds, provides greater regulatory flexibility and systemic stability compared to single-component approaches when addressing complex, chronic inflammatory states.
Figure 5. Schematic Diagram of the Anti-inflammatory Mechanism of Atractylodis Rhizoma. Note: The figure illustrates the specific mechanisms of the Nrf2, NF-κB, and MAPK signaling pathways, distinguished by color. The various targets are labeled in the figure, and arrows indicate direct interactions with those targets or pathways.

5.3. Antioxidant Effect

Oxidative stress refers to a condition in living organisms characterized by an imbalance between the production and elimination of reactive oxygen species (ROS), leading to cellular damage [97]. This phenomenon is closely associated with the onset and progression of various diseases, including cardiovascular diseases [98], neurodegenerative disorders [99], and cancer. Therefore, the identification of effective antioxidants is of critical importance. Current research on natural product antioxidants primarily focuses on their ability to directly scavenge free radicals, such as DPPH and ABTS, or to provide reducing equivalents, as evaluated by FRAP and CUPRAC assays [100]. As demonstrated in Table S5 and Figure 6, certain terpenoid and phenolic derivatives exhibit significant activity in chemical models, with effects comparable to those of ascorbic acid. However, their mechanisms of action are predominantly confined to the downstream stage of direct neutralization. Furthermore, their efficacy and stability within complex biological systems are often compromised by low concentrations and rapid metabolism. In contrast, the sesquiterpene lactone components characteristic of AR, which constitute the primary focus of this study, demonstrate a more profound and physiologically relevant mechanism of action. Experimental evidence substantiates that atractylenolactam (258) significantly activates the intracellular Nrf2 antioxidant signaling pathway. Nrf2 serves as a pivotal transcription factor governing cellular defenses against oxidative stress; its activation systematically induces the expression of various phase II detoxification enzymes, such as heme oxygenase-1 (HO-1) and nicotinamide adenine dinucleotide phosphate quinone dehydrogenase 1 (NQO1), alongside endogenous antioxidant enzymes [101]. This finding suggests that the antioxidant effects of AR transcend mere passive radical scavenging, actively augmenting the cells’ intrinsic defense mechanisms. Consequently, this provides a more robust molecular foundation for achieving sustained, broad-spectrum protection against oxidative damage, thereby demonstrating significant advantages, particularly in addressing persistent oxidative stress associated with chronic diseases.
Figure 6. Schematic Diagram of the Antioxidant Mechanism of Atractylodis Rhizoma. Note: This figure illustrates the antioxidant effects of AR. The large arrows indicate where AR acts on cells; ↑ represents an increase, and ↓ represents a decrease. Additionally, the differently colored elements represent organelles affected by oxidative stress, such as mitochondria and the endoplasmic reticulum.
Furthermore, the antioxidant properties of AR are significantly augmented by the synergistic interactions among its diverse constituents. The data presented in the Table S5 suggest that while the activity of individual compounds may be limited, natural essential oils or extracts frequently demonstrate enhanced overall activity due to the synergistic interactions among their components. AR is abundant in various sesquiterpene lactones, such as atractylenolide I (271), II (268), and III (251), in addition to polyacetylene compounds, such as atractylodin (141). These constituents may engage in network pharmacologic effects through distinct molecular targets and mechanisms of action, resulting in synergistic or additive antioxidant effects. This complex natural defense system, comprising multiple components, poses a greater challenge for the body to compensate for or circumvent compared to a single compound, thereby potentially providing more stable and comprehensive protection. Consequently, AR functions not only as a source of highly active lead compounds but also as a standardized extract. As a natural preparation capable of multi-targeted, systemic regulation of endogenous antioxidant pathways, it exhibits unique potential and broad application prospects in the development of herbal medicines and functional foods aimed at the prevention or adjunctive treatment of oxidative stress-related diseases.

5.4. Hepatoprotective Effect

Liver injury, characterized as a complex pathological process arising from various etiological factors, has historically posed significant challenges in pharmacological research, particularly in the formulation of effective prevention and treatment strategies. Conventional single-target interventions frequently prove inadequate in addressing the extensive array of pathways implicated in the initiation and progression of liver injury, which include oxidative stress, lipid metabolism disorders, inflammatory responses, and fibrosis [102]. Within this framework, AR and its diverse bioactive constituents demonstrate considerable hepatoprotective potential and systemic intervention benefits, attributable to their multi-component and multi-target action properties. Emerging research [103] suggests that the hepatoprotective effects of AR are achieved through synergistic regulation across various stages and pathological dimensions of liver injury (refer to Table S6 and Figure 7). In the initial phase of injury, bioactive compounds such as atractylodin (141) and neochlorogenic acid (240) effectively inhibit fatty acid synthesis and promote its oxidation through activation of the AMPK pathway and upregulation of PPARα/CPT-1 expression [104,105]. This modulation of lipid metabolism ameliorates metabolic disorders and addresses the underlying pathology of non-alcoholic fatty liver disease. Simultaneously, compounds such as eucalyptol (115) attenuate drug- or toxin-induced oxidative stress-related liver damage by significantly enhancing the activity of endogenous antioxidant enzymes, including glutathione (GSH) and superoxide dismutase (SOD), while reducing oxidative damage markers such as malondialdehyde (MDA) and 8-hydroxy-2′-deoxyguanosine (8-OHDG) [106]. Moreover, derivatives of AR demonstrate significant potential in mitigating the malignant progression associated with liver damage. Notably, Senkyunolide A (294) alleviates cholestatic liver fibrosis through the modulation of endoplasmic reticulum autophagy, while Germacrone impedes the JAK2/STAT3 signaling pathway, thereby inhibiting hepatic stellate cell activation and collagen deposition [107]. Furthermore, the biomolecules such as Atractylodin (141) and Atractylodes polysaccharide present in AR have been shown to exhibit substantial hepatoprotective properties [108]. This broad spectrum of actions, which includes metabolic regulation, antioxidant defense, and anti-fibrotic effects, provides comprehensive protection against the progressive pathological trajectory of liver injury.
Figure 7. Schematic Diagram of the Hepatoprotective Mechanism of Atractylodis Rhizoma. Note: ↑ represents an increase, and ↓ represents a decrease.

5.5. Anti-Cancer Effect

This study provides a comprehensive review of the diverse bioactive compounds found in AR, with a specific focus on their anticancer properties as detailed in Table S7 and Figure 8. Among these compounds, sesquiterpene lactones, including atractylenolide II (268), atractylenolide I (271), and guaiol (191), are identified as the primary active constituents. These compounds demonstrate significant efficacy in modulating key signaling pathways, such as PI3K/Akt/mTOR, STAT3, and ERK. Furthermore, volatile oils and terpenoid components, such as β-eudesmol (71) and δ-elemene (319), play a crucial role in directly inducing tumor cell apoptosis and cell cycle arrest. Phenolic acid derivatives such as Chlorogenic acid (242) further augment these effects by modulating oxidative stress and immune responses. The diversity of these components does not operate in isolation; rather, they collectively contribute to the comprehensive capacity of AR to intervene in tumor biology through multiple targets and at various levels.
Figure 8. Schematic Diagram of the Anti-cancer Mechanism of Atractylodis Rhizoma. Note: The arrows indicate how AR exerts its anticancer effects through apoptosis, cell proliferation, and macrophage polarization, respectively. The tumor cells of different colors represent the outcomes resulting from these three mechanisms, including apoptosis, growth inhibition, and phagocytosis.
The notable anti-cancer properties of AR are attributed to its extensive regulation of both the tumor microenvironment and systemic physiology, extending beyond mere direct cytotoxic effects. The primary component, atractylenolide II, exemplifies this characteristic by modulating the immune microenvironment across various cancer types, specifically through the inhibition of M2 macrophage polarization and the downregulation of PD-L1. Additionally, it participates in emerging biological processes such as glycolytic metabolism and the induction of ferroptosis [109,110]. This complex mechanism of a single molecule suggests that its target may be located at an upstream node in the bidirectional regulation between tumor cells and the microenvironment. Furthermore, the therapeutic potential of AR also addresses the systemic manifestations of tumor diseases. For instance, atractylenolide I alleviates cancer cachexia-related muscle wasting by inhibiting the STAT3 pathway [111]. This aligns with the principles of Traditional Chinese Medicine, which focus on fortifying the spleen, enhancing qi, and bolstering the body’s vital energy. It embodies a unique holistic therapeutic approach that concurrently eliminates pathogens and strengthens the body’s defenses.

5.6. Anti-Diabetic Effect

The anti-diabetic potential of AR is notably significant due to its direct hypoglycemic effects, which influence essential pathways of glucose metabolism through synergistic multi-component mechanisms (Table 3). Recent studies indicate that its active constituents can modulate blood glucose regulation through multiple targets. For example, molecular docking analyses have confirmed that γ-cadinene (42), a sesquiterpene component abundant in its essential oil, exhibits a strong binding affinity with the insulin receptor (INSR). This observation suggests that γ-cadinene (42) may mimic or enhance insulin signaling, thereby directly mitigating insulin resistance, which is a critical mechanism for lowering blood glucose levels [112]. Simultaneously, the sesquiterpene constituents of AR essential oil, such as eucalyptol (115) and compounds structurally similar to valeranone (60), may enhance endogenous insulin secretion and utilization by protecting pancreatic beta cells and inhibiting dipeptidyl peptidase-IV (DPP-IV) enzyme activity, respectively [113,114]. Collectively, these mechanisms fortify the insulin axis. Additionally, the extract’s potential α-glucosidase inhibitory activity may directly impede carbohydrate absorption in the intestine, thereby enabling rapid management of postprandial blood glucose surges. This simultaneous intervention across three pivotal pathways—insulin sensitivity, insulin secretion, and postprandial blood glucose regulation—constitutes the primary advantage of AR’s direct hypoglycemic effect.
Table 3. Anti-diabetic effect of Atractylodis Rhizoma.
In a more comprehensive context, the hypoglycemic properties of AR are intricately linked to both the prevention and treatment of diabetic complications, thereby demonstrating dual benefits in glucose metabolism regulation and tissue protection. Specific constituents, such as eucalyptol (115), play a crucial role in mitigating retinal pigment epithelial barrier dysfunction in diabetic models by downregulating matrix metalloproteinases (MMPs) and reducing apoptosis and oxidative stress, as evidenced by decreased reactive oxygen species (ROS). This underscores its unique value in preventing diabetic retinopathy [114]. Additionally, phenolic acid components, such as cryptochlorogenic acid (245), may inhibit ferroptosis in pancreatic β-cells by activating the Nrf2/GPX4 pathway, thereby providing sustained protection for pancreatic function [119]. This synergistic effect, which includes the concurrent reduction in blood glucose levels along with antioxidant and anti-inflammatory benefits, as well as the protection of microvasculature and vital organs, elevates AR beyond the role of a mere hypoglycemic agent.

5.7. Intestinal Regulatory Function

Recent research on ulcerative colitis (UC) and associated intestinal inflammation has increasingly concentrated on natural products, owing to their multi-target effects and favorable safety profiles [121]. Empirical evidence indicates that AR contains bioactive compounds such as sesquiterpenes, polyacetylenes, and phenolic acids, which have demonstrated efficacy in preclinical colitis models (refer to Table S8 and Figure 9). These compounds collectively reduce the disease activity index (DAI) and enhance the integrity of the intestinal barrier, as evidenced by the upregulation of tight junction proteins, including ZO-1, occludin, claudin-1, and MUC2 [122]. Furthermore, they inhibit key pro-inflammatory signaling pathways, notably NF-κB and MAPK. In addition, these compounds modulate oxidative stress markers by elevating levels of SOD, GSH-Px, and CAT, while decreasing MDA levels, and they contribute to the restoration of gut microbiota balance [123]. This multifaceted mechanism of action stands in contrast to the single-target approach of synthetic drugs such as sulfasalazine or mesalazine.
Figure 9. Schematic Diagram of the Intestinal regulatory Mechanism of Atractylodis Rhizoma. Note: Light orange modules represent AR; light yellow modules indicate that AR acts through four mechanisms simultaneously, with different arrows denoting multi-pathway action; light red modules indicate that synthetic drugs have only one arrow, representing a single target. Additionally, the different colors in the central region represent the interactions among the intestinal barrier, the gut microbiota, and antioxidant enzymes, illustrating AR’s multidimensional regulatory capabilities.
The primary benefit of AR lies in its synergistic and multi-dimensional strategy for addressing intestinal inflammation. Unlike monotherapies that typically target singular pathways, the phytochemical constituents of AR concurrently tackle multiple pathological aspects of ulcerative colitis, such as barrier dysfunction, immune dysregulation, oxidative damage, and microbial dysbiosis. For instance, atractylodin (141) not only inhibits the activation of NF-κB and MAPK pathways but also fosters the growth of beneficial gut microbiota and influences metabolic regulation through GAPDH malonylation [122]. Similarly, hinesol (66) and atractylenolide III (251) collaboratively enhance tight junction integrity while downregulating various cytokines and chemokines [123,124]. This multi-target approach may enhance therapeutic efficacy and reduce the risk of compensatory resistance, offering a treatment strategy that aligns with the principles of “network pharmacology” inherent in herbal medicine.

5.8. Neuroprotective Effect

Research on AR within the realm of neuroprotection is transitioning its role from a traditional medicinal herb to a comprehensive natural compound library with well-defined multi-target mechanisms. Unlike the numerous single compounds documented in the literature, the significance of AR lies in its diverse array of bioactive constituents, including polyacetylenes and sesquiterpene lactones, which collectively form a more extensive neuroprotective network (see Table 4). For instance, its primary component, atractylodin (141), demonstrates anti-inflammatory and antioxidant properties [103]; atractylenolide III (251) modulates astrocyte function [125]; and atractylenolactam (258) suppresses microglial activation [126]. Together, these elements collectively form a functionally synergistic composite system, whose combined effects exceed those of the individual compounds listed in the table. For instance, Linalool primarily addresses oxidative stress, β-Phellandrene specifically inhibits acetylcholinesterase (AChE), and Parthenolide selectively modulates certain inflammatory pathways. This inherent multi-component, multi-pathway synergistic capability confers upon AR an augmented potential for systematic intervention in complex pathologies characterized by multiple interrelated factors, such as neurodegenerative diseases.
To fully capitalize on this advantage, it is essential for research to make substantial advancements across several domains. Mechanistic investigations should transition from a focus on individual pathways to employing computational pharmacology and multi-omics approaches. This will facilitate a comprehensive understanding of how atractylodin (141), atractylenolides, and other critical components of AR interact to modulate the “neuroinflammation-oxidative stress-pyroptosis-autophagy” network. In the realm of formulation development, insights should be drawn from the successful implementation of citronellyl acetate nanoparticles and rutin-AuNPs. Given the characteristics of the active constituents, it is crucial to design innovative nanoscale systems capable of co-loading multiple components to improve brain delivery, thereby overcoming challenges related to bioavailability and targeted delivery [127,128]. Furthermore, validation models for therapeutic efficacy need to evolve beyond single-injury paradigms to establish animal models that more accurately represent the complexity of clinical diseases and the pathomechanism of spleen deficiency with dampness obstruction, as conceptualized in Traditional Chinese Medicine. These models should integrate variables such as aging, metabolic abnormalities, and neuroinflammation.
Table 4. Neuroprotective effect of Atractylodis Rhizoma.
Table 4. Neuroprotective effect of Atractylodis Rhizoma.
BioactivityCompounds/ExtractsTesting Subjects
(Animal/Model)
Dose Positive ControlResults/MechanismReferences
Anti-anxietyDehydrofukinone (75)Swiss mice10, 22, 30, 100 mg/kgDiazepamGABAₐ receptor activity ↑, Chloride ion influx ↑, Voltage-dependent calcium channel activity ↓, Free calcium concentration ↓[129]
Neuroprotective effectIsoaromadendrene epoxide (76) from essential oilIn vitro: PC12 and BV2 cells; In vivo: C57BL/6 miceIn vitro: 0.1–10 µg/mL; In vivo: 10–20 mg/kgMemantineIL-1β ↓, IL-6 ↓, TNF-α ↓, GABA ↑, 5-HT ↑, NE ↑[130]
Neuroprotective effectAtractylodin (141)C57BL/6J mice20 mg/kg and 40 mg/kgNot mentionedTNF-α ↓, IL-6 ↓, IL-1β ↓, NLRP3 ↓, NF-κB ↓, BDNF ↑, Akt ↑, MDA ↓, SOD ↑, GSH-Px ↑, GSH ↑[103]
Neuroprotective effectEucalyptol (115)Wistar rats100 mg/kg/dNot mentionedMDA ↓, GSH ↑, SOD ↑, GPx ↑, TNF-α ↓, IL-1β ↓, IL-6 ↓, IL-10 ↑, SIRT1 ↑, NF-κB ↓, BDNF ↑, [131]
Neuroprotective effectLinalool (117)PC12 Cell1–100 µmol/LNot mentionedROS ↓, MDA ↓, DNA ↓, Bax/Bcl-2 ↓, caspase-3 ↓, caspase-9 ↓[132]
Neuroprotective effectβ-Phellandrene (120)Enzyme inhibition assay in vitro300 µg/mLNot mentionedAChE ↓[133]
Anti-aggregation and disaggregation effects of Aβ amyloid proteinCitronellyl acetate (125) loaded onto CaCO3 nanoparticlesIn vitro simulation100 µg/mLBHT, Donepezil, GalantamineAChE ↓, Aβ aggregation ↓[134]
Anti-aggregation and disaggregation effects of Aβ amyloid proteinCitronellyl acetate (125) loaded onto hydroxyapatite nanocarriersIn vitro simulation100 µg/mLBHT, Donepezil, GalantamineAChE ↓, Aβ aggregation ↓[127]
Neuroprotective effect(-)-Bornyl acetate (126)C57BL/6 mice100, 200, 400 mg/kgNot mentionedCD11b+/CD45+ Cell ↓, IL-1β ↓, IL-6 ↓, TNF-α ↓, iNOS ↓, COX-2 ↓, MCP-1 ↓, MIP-1α ↓, RANTES ↓, p38 ↓, ERK ↓, NF-κB ↓, ZO-1 ↑, Occludin ↑, PECAM-1 ↓, MMP-9 ↓, ICAM-1 ↓[135]
Anti-neuroinflammatory effectCarveol (146)SD rats5, 10, 20 mL/kgNot mentionedAlleviate thermal pain sensitivity and improve motor coordination, GSH ↑, GST ↑, iNOS ↓, LPO ↓, NF-κB ↓, COX-2 ↓, TNF-α ↓[136]
Alleviating neuroinflammation and pain in diabetesCarveol (146)SD rats5, 10, 20 mL/kgPregabalinGSH ↑, GST ↑, LPO ↓, NO ↓, COX-2 ↓, TNF-α ↓, NF-κB ↓[137]
Improving memory impairment and neuroinflammationCarveol (146)SD rats50, 100, 200 mg/kgDonepezilGSH ↑, GST ↑, CAT ↑, LPO ↓, Aβ ↓, NF-κB ↓, TNF-α ↓, IL-18 ↓, PGE2 ↓[138]
Improving Parkinson’s diseaseCarveol (146)Albino mice50 mg/kgNot mentionedROS ↓, LPO ↓, Nrf2 ↑,HO-1 ↑, NLRP3 ↓[139]
Improving Alzheimer’s diseaseQuinic acid (235)SH-SY5Y cell50–200 µMDonepezilROS ↓, Aβ ↓, phosphorylated tau ↓, MAPK ↓[140]
Promoting the proliferation and differentiation of neural stem cellsQuinic acid (235)Hippocampal cell50, 100, 200 µMNot mentionedMash1 ↑, Ngn2 ↑, Notch1 ↑, Hes1 ↑[141]
Improving Alzheimer’s diseaseQuinic acid (235)C57BL/6 mice30 mg/kg/dNot mentionedIAA ↑, KYNA ↑, DR3 ↓, IKK ↓, NF-κB ↓, Aβ42 ↓, p-Tau ↓[142]
Improving Alzheimer’s diseaseCorogenic acid (242) C57 mice 2 mg/kgNot mentionedAβ ↓, BACE1 ↓, TNF-α ↓, IL-1β ↓, IL-6 ↓[143]
Neuroprotective effectRutin (250)-AuNPsIn vitro: SH-SY5Y cells, In vivo: ICR mice20–100 µg/mLNot mentionedNrf2 ↑, ARE ↑, ROS ↓[128]
Improving Alzheimer’s diseaseAtractylenolide III (251)In vitro: C8-D1A astrocytes, In vivo: C57BL/6 mice In vitro: 100 µM; In vivo: 2.4 mg/kgNot mentionedAQP4 ↑[125]
Neuroprotective effectAtractylenolactam (258)In vitro: Bv2 microglia, HT22 neuron cells 50 µMNot mentionedTNF-α ↓, IL-6 ↓, IL-1β ↓[126]
Antidepressant effectα-cyperone (273)In vivo: Wistar rats5, 10 mg/kgNot mentionedIL-1β ↓, TNF-α ↓, p65 phosphorylation ↓[144]
Improving Parkinson’s diseaseα-cyperone (273)Wistar rats10 mg/kgNot mentionedNrf2 ↑, HO-1 ↑, NF-κB ↓[145]
Alleviating brain ischaemic damageParthenolide (287)In vivo: Sprague Dawley rats; In vitro: The human microglial clone 3 cell In vivo: 0.5 mg/kg, 1 mg/kg; In vitro: 2 µMGinationRhoA ↓, ROCK ↓, NF-κB ↓[146]
Improving neurological function following traumatic brain injuryParthenolide (287)In vivo: C57BL/6 mice; In vitro: Bv2 microglia, HT22 neuron cells In vivo: 1 mg/kg; In vitro: 0.5–5 µM Not mentionedSTAT3 ↓, NF-κB ↓, NLRP1 ↑, NLRP3 ↑, NLRC4 ↑[147]
Improve cognitive impairmentleamide (310) from Ethanolic Extract of Rosa rugosa RootsICR mice10, 20, 40 mg/kgNot mentionedMDA ↓, ADAM10 ↑[148]
Note: ↑ represents an increase, and ↓ represents a decrease.

5.9. Cardiac-Protective Effect

AR, a traditional medicinal plant, has been shown in recent studies to contain a diverse array of bioactive compounds with cardioprotective potential. These compounds exhibit synergistic effects through multiple targets and pathways, highlighting their significant value in the prevention and treatment of cardiovascular diseases (see Table 5). The compounds listed in this table, including camphene (121), cryptochlorogenic acid (245), atractylenolide II (268), valerenic acid (288), and valencene (327), can primarily be isolated directly from this plant. These constituents enhance antioxidant capacity in animal and cellular models by increasing the ratios of superoxide dismutase (SOD), catalase (CAT), and glutathione/glutathione disulfide (GSH/GSSG). They also suppress oxidative stress and inflammatory pathways by downregulating nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB), tumor necrosis factor-alpha (TNF-α), and interleukin-6 (IL-6). Furthermore, they regulate myocardial energy metabolism by activating peroxisome proliferator-activated receptor alpha (PPARα) and promoting fatty acid oxidation [149]. Additionally, these compounds decrease levels of TGF-β1 and collagen I, effectively inhibiting myocardial fibrosis. This action results in anti-hypertrophic effects, enhanced cardiac function, and reduced myocardial damage.
In contrast to existing studies that predominantly focus on individual components or pathways, the primary advantage of AR lies in its comprehensive regulation through multiple components, targets, and pathways. While previous research often aims at specific pathological pathways using synthetic drugs or isolated plant components, the diverse constituents of AR—such as terpenoids, phenylpropanoids, and volatile oils—exert synergistic or cumulative effects on various pathological processes, including myocardial hypertrophy, fibrosis, oxidative damage, and energy metabolism disorders. For example, atractylenolide II and valerenic acid work in concert to alleviate myocardial remodeling and metabolic dysfunction by inhibiting the TGF-β1/Smad pathway and activating the PPARα pathway, respectively [150,151]. Simultaneously, camphene (121) and valencene (327) synergistically enhance the endogenous antioxidant system, thereby mitigating myocardial oxidative damage resulting from ischemia–reperfusion injury or hypertension [149,152]. This multi-tiered, networked mechanism of action aligns with the principles of combination therapy and systemic regulation emphasized in modern cardiovascular disease treatment. Moreover, it endows AR with a unique potential for the prevention and management of complex cardiac conditions, such as metabolic cardiomyopathy.
Table 5. Cardiac-protective effect of Atractylodis Rhizoma.
Table 5. Cardiac-protective effect of Atractylodis Rhizoma.
BioactivityCompounds/ExtractsTesting Subjects
(Animal/Model)
Dose Positive ControlResults/Mechanism References
Cardio-protective effectCamphene (121)Wistar rats30 µg/gNot mentionedLDH ↓, GSH/GSSG ↑; CS ↑; CAT ↑, Mn-SOD ↑, GR ↑; GPx4 ↓[152]
Improvement of myocardial hypertrophyCryptochlorogenin acid (245)In vivo: SD rats, In vitro: H9c2 cellIn vivo: 200 mg/kg; In vitro: 10, 25, 50 µMPropranololAkt ↓, mTOR ↓, HIF-1α ↓; ANP ↓, BNP ↓[151]
Improvement of cardiac functionAtractylenolide II (268)Spontaneous hypertension rats and Wistar Kyoto rats10, 30, 60 mg/kg/dayNot mentionedLVEF ↑, LVMI ↓; Collagen I ↓, α-SMA ↓, Fibronectin ↓; TGF-β1 ↓; SOD ↑, GSH-Px ↑; H2O2 ↓, MDA ↓, NOX ↓[150]
Anti-hypertrophic effect on the myocardiumValerenic acid (288)In vivo: ICR mice; In vitro: H9C2 cardiac myocytesIn vivo: 0.5 mg/kg, 2 mg/kg; In vitro: 1, 5, 10 µMFenofibratePPARα ↑; IL-6 ↓, IL-1β ↓, TNF-α ↓[153]
Cardiac protectionValencene (327)Wistar rats12 mg/kg/dayNot mentionedcTn-I ↓, Myoglobin ↓; SOD ↑, CAT ↑, GPx ↑; hs-CRP ↓; Homocysteine ↓, NF-κB ↓, TNF-α ↓, IL-1β ↓, IL-6 ↓, IL-10 ↑[149]
Note: ↑ represents an increase, and ↓ represents a decrease.

5.10. Joint Repair Function

Atractylodes, a genus of medicinal plants, is extensively employed in traditional medicine to alleviate dampness obstruction in the middle jiao and rheumatic arthralgia [12]. Notably, AR stands out among its species, as contemporary pharmacological research has underscored its substantial potential in the treatment of arthritis [154]. In contrast to chemically synthesized drugs, which generally target a singular pathway, the anti-arthritic effects of AR are derived from its naturally occurring synergistic pharmacodynamic complex, comprising multiple components. As demonstrated in Table 6, its primary active constituents—such as atractylenolide, eucalyptol, borneol acetate, carvone, geraniol, and ligustilide—exhibit multidimensional intervention in the intricate pathological processes of arthritis through an interconnected network mechanism, as evidenced in both animal and cellular models.
The principal benefit of this approach lies in its systematic regulation of the pathological network encompassing “inflammation-immunity-oxidation-degradation” in arthritis. This method effectively synergizes the inhibition of central inflammatory signaling pathways, such as NF-κB and MAPK, resulting in a comprehensive downregulation of key pro-inflammatory cytokines, including TNF-α, IL-6, and IL-1β [155]. Simultaneously, it modulates macrophage polarization, thereby exerting substantial control over the immune-inflammatory network. Additionally, it provides concurrent protection to joint tissue structures. For instance, geraniol (187) mitigates oxidative damage by activating antioxidant pathways, such as Keap1/Nrf2/HO-1 [156]. It also enhances the expression of type II collagen and aggregated proteoglycans while inhibiting MMP13 and ADAMTS-5.
Table 6. Joint repair function of Atractylodis Rhizoma.
Table 6. Joint repair function of Atractylodis Rhizoma.
Bioactivity Compounds/ExtractsTesting Subjects
(Animal/Model)
Dose Positive ControlResults/MechanismReferences
Joint repair functionAtractylodin (141)In vitro: BM-DCs cell; In vivo: DBA/1 miceIn vitro: 12.5, 25, 50, 100 µM; In vivo: 40 mg/kgQuercetinCD40 ↓, CD80 ↓, CD86 ↓; TNF-α ↓, IL-6 ↓, IL-1β ↓, IL-23 ↓, IL-12 ↓, IFN-γ ↓, NO ↓; p38 ↓, ERK ↓, NF-κB ↓[155]
Anti-gouty arthritis effectEucalyptol (115)BALB/c mice30, 100, 300, 600 mg/kgIndomethacinNLRP3 ↓, IL-1β ↓, IL-6 ↓, TNF-α ↓, MPO ↓; ROS ↓, SOD ↑, GSH-Px ↑, MDA ↓; TRPV1 ↑, Nrf2 ↑, HO-1 ↑[157]
Joint repair function(-)-Bornyl acetate (126)DBA/1J mice20, 40 mg/kgMethotrexateCYP17A1 ↓, HSD17B3 ↓; TLR4 ↓, MAPK ↓, NF-κB ↓[158]
Joint protection functionCarveol (146)In vitro: RAW264.7 Macrophages, In vivo: C57BL/6J miceIn vitro: 10, 25, 50 µg/mL; In vivo: 12.5 mg/kg, 25 mg/kgNot mentionedM1-type macrophages ↓, IL-1β ↓, IL-6 ↓, TNF-α ↓, iNOS ↓; M2-type macrophages ↑, ARG-1 ↑, CD206 ↑, MGL-1 ↑, MGL-2 ↑; HO-1 ↑, ROS ↓; COX-2 ↓, MMP13 ↓, ADAMTS-5 ↓[159]
Joint protection functionGeraniol (187)In vitro: Mouse chondrocytes; In vivo: C57BL/6 miceIn vitro: 1 µM; In vivo: 1 mg/mLNot mentionedCol2a1 ↑, Aggrecan ↑; MMP13 ↓, ADAMTS-5 ↓; Keap1 ↓, Nrf2 ↑, HO-1 ↑; p-p65 ↓[156]
Joint repair functionSenkyunolide A (294)In vitro: Mouse chondrocytes; In vivo: C57BL/6 miceIn vitro: 20, 40, 80 µg/mL; In vivo: 20, 40 mg/kgNot mentionedMMP13 ↓, ADAMTS4/5 ↓; IGF-1 ↑, Aggrecan ↑, Col2a1 ↑; TNF-α ↓, IL-6 ↓, IL-18 ↓; NLRP3 ↓, Caspase-1 ↓[160]
Note: ↑ represents an increase, and ↓ represents a decrease.

5.11. Protective Effect Against Lung Injury

The protective effects of AR against pulmonary injury are attributed to its multi-component synergistic actions, which establish a complex, multi-level, and multi-target regulatory network (Table 7). The active ingredient data compiled in this study elucidate these properties: chlorogenic acid (242) primarily exerts antioxidant effects and regulates macrophage polarization; dehydrocostus lactone (256) inhibits the key glycolytic enzyme PFKFB3, thereby modulating inflammatory metabolism. Acetylatractylodinol (270), isolated from its ethanol extract, concurrently inhibits inflammation mediated by the PI3K/AKT pathway and uniquely alters the host metabolic profile [161]. This indicates that it not only mitigates pulmonary edema and inflammatory responses but also potentially aids lung tissue in fulfilling energy and repair requirements under injury-induced stress through metabolic reprogramming. This comprehensive intervention, targeting the three core pathological pathways—inflammation, oxidative stress, and metabolic disorders—enables its mechanism of action to surpass traditional strategies primarily centered on immunosuppression, such as those exemplified by dexamethasone.
Table 7. Protective effect against lung injury of Atractylodis Rhizoma.
The metabolic regulatory function of acetylatractylodinol (270) is particularly noteworthy, offering substantial scientific value and potential for the development of AR in the treatment of lung injury. Contemporary therapeutic strategies for acute lung injury (ALI) are transitioning from exclusively anti-inflammatory approaches to those that prioritize the maintenance of tissue homeostasis, as metabolic dysregulation has been recognized as a pivotal factor in the progression of injury [165]. The bioactive constituents of AR such as dehydrocostus lactone (256) include compounds that both regulate inflammation and modulate metabolism, suggesting that the herb or its active fractions may influence more nuanced pathological processes, such as the repair of the alveolar epithelial barrier and the preservation of mitochondrial function. This discovery introduces a promising new paradigm for the development of lung protectants derived from natural products.

5.12. Other Effects

In addition to its previously discussed pharmacological effects, AR exhibits several other notable properties. Extracts of AR demonstrate significant anti-inflammatory effects in murine models of asthma and particulate matter-induced lung inflammation, potentially through the inhibition of the NF-κB pathway [166]. This effect may be attributed to components such as Senkyunolide A (294), which mitigates airway injury and remodeling in asthmatic mice and modulates the progression of asthma, consistent with the findings of [167]. Furthermore, the polysaccharides present in AR exhibit anti-aging properties and may serve as potential antioxidants [168]. These findings support the potential development of AR as a novel pharmaceutical and natural health product. However, factors such as poor water solubility and low bioavailability need to be overcome.

6. Toxicity

An analysis of ancient texts and contemporary research indicates that AR is characterized by minimal toxicity, a finding corroborated by extensive acute and chronic toxicity evaluations. In vivo studies using animal models such as mice, rats, and zebrafish embryos have systematically assessed its safety margin. Specifically, oral acute toxicity tests of A. lancea crude ethanolic extracts demonstrated a median lethal dose (LD50) greater than 2000 mg/kg, with no significant liver or kidney damage or pathological changes observed in other organs [169]. Furthermore, Even after processing, AR does not exhibit any significant toxicity [170]. This further demonstrates that AR is safe within certain dosage ranges. The safety profile is closely linked to its therapeutic mechanisms; studies confirm that AR mitigates inflammation and oxidative stress by inhibiting the NF-κB signaling pathway and activating the Nrf2 pathway without obvious toxic side effects at therapeutic doses [171].
Although the crude herb exhibits a wide safety window, investigations into major active constituents reveal dose-dependent toxicological effects that require careful consideration. AR samples with concentrations ranging from 0 to 25 mg/mL have demonstrated no toxic effects on A549 cells [172]. However, evaluations using in vitro and zebrafish embryo models for constituents such as atractylenolides (I, II, and III), atractylones, and β-eudesmol have identified specific risks. Notably, atractylenolides I (271) and II (268) have been shown to induce significant developmental abnormalities and hepatotoxicity in zebrafish embryos, evidenced by liver atrophy, decreased liver-specific fluorescence intensity, elevated liver enzyme levels, apoptosis, and the inhibition of drug-metabolizing enzymes [173]. At specific concentrations, β-eudesmol (71) and atractylones are linked to decreased embryo survival rates, developmental abnormalities, and alterations in the expression of genes related to oxidative stress, suggesting potential risks of embryotoxicity and oxidative damage [174]. Collectively, while AR possesses a substantial safety margin supporting its traditional use, certain active compounds may pose risks of developmental and hepatotoxicity at elevated doses or during embryonic development. Therefore, it is recommended that clinical applications carefully regulate dosages, avoid prolonged administration of high doses, and advance toxicological research and safety monitoring of these active constituents to ensure safe therapeutic application.

7. Limitations

Despite the comprehensive and systematic nature of this review, which integrates historical herbal textual research with modern phytochemical and pharmacological findings to provide a holistic understanding of AR, several inherent limitations must be acknowledged. These limitations primarily pertain to methodological constraints within the reviewed literature, the predominant reliance on preclinical evidence, and the corresponding lack of robust clinical validation, which collectively warrant a critical interpretation of the findings presented. First, from a methodological perspective, significant heterogeneity exists across the included studies regarding extraction protocols, compound identification, and experimental models. Many pharmacological investigations have utilized crude extracts or essential oils without standardized quantification of their major bioactive constituents, complicating the attribution of observed effects to specific compounds and hindering cross-study comparability. Furthermore, although computational approaches such as molecular docking have been extensively employed to predict mechanisms of action, these in silico findings frequently lack experimental validation through target engagement assays or genetic knockdown models, leaving proposed molecular interactions largely speculative.
Second, the current evidence base is overwhelmingly dominated by preclinical studies, with in vitro experiments on cell lines and in vivo evaluations in rodent models constituting the vast majority of pharmacological data. While these studies provide valuable mechanistic insights and establish biological plausibility, they possess inherent limitations in recapitulating human disease pathophysiology, particularly regarding drug metabolism, immune system interactions, and chronic disease progression. The translational relevance of these findings remains uncertain without confirmation in higher animal models or human systems. Third, and perhaps most critically, clinical evidence validating the therapeutic efficacy and safety of AR in human subjects remains exceptionally limited. The few available clinical studies are characterized by small sample sizes, lack of randomization or blinding, and absence of standardized AR preparations with verified phytochemical profiles. Consequently, definitive conclusions regarding optimal dosing, long-term safety, and comparative effectiveness against standard therapies cannot be drawn. This scarcity of rigorous clinical trials represents the most significant barrier to evidence-based clinical application. Additionally, the two pharmacopoeial species, A. lancea and A. chinensis, are often conflated in both experimental and clinical literature, yet emerging evidence demonstrates substantial chemotaxonomic differences that may translate into differential pharmacological activities. This conflation introduces confounding variables that undermine the specificity and reproducibility of research findings. It must not be overlooked that one reason for AR’s favourable biological activity lies in its nature as a complex mixture of multiple compounds, presenting an unavoidable challenge when considering it for development and therapeutic applications.
By explicitly acknowledging these limitations, this review aims to enhance critical depth and transparency, emphasizing that while the foundational science of AR is robust and promising, its clinical translation remains nascent. Future research must prioritize methodological rigor, standardized phytochemical characterization, and well-designed clinical trials to transform the extensive preclinical promise of AR into evidence-based therapeutic applications.

8. Conclusions

Despite significant advancements in understanding the phytochemistry and pharmacology of AR, several critical challenges and knowledge gaps persist, necessitating a paradigm shift in future research endeavors. The current body of evidence is constrained by three fundamental contradictions: the discordance between complex phytochemical profiles and poorly defined molecular mechanisms, the disparity between potent in vitro bioactivities and unfavorable in vivo pharmacokinetics characterized by low bioavailability, and the clinical interchangeability of two chemically distinct pharmacopoeial species, specifically A. lancea and A. chinensis.
To bridge these gaps and facilitate the evidence-based development of AR from a traditional remedy to a modern therapeutic agent, future investigations should prioritize five interconnected research directions. First, the in vivo fate and direct protein targets of its bioactive constituents demand rigorous elucidation through integrated pharmacokinetic profiling and chemical proteomics approaches such as activity-based protein profiling, thereby establishing a definitive molecular basis for its traditional efficacy in invigorating the spleen and resolving dampness. Second, the synergistic mechanisms underlying its multi-component nature should be systematically deconvoluted by employing network pharmacology integrated with multi-omics readouts including transcriptomics, proteomics, and metabolomics to map the compound–target–pathway–phenotype network, with particular emphasis on the combinatorial effects and potential synergism among major constituents like atractylodin, β-eudesmol, and the atractylenolides. Third, overcoming the intrinsic challenge of poor bioavailability, particularly for hydrophobic sesquiterpenes, is paramount and necessitates the rational design of advanced drug delivery systems including nanocarriers such as liposomes and polymeric nanoparticles, alongside investigations into traditional combination strategies that may enhance gastrointestinal absorption. Fourth, given the pronounced chemotaxonomic variation between A. lancea and A. chinensis, rigorous comparative studies are urgently required to correlate their distinct chemical signatures with differential pharmacological potencies in core therapeutic areas such as gastroprotection and anti-inflammation, thereby providing a scientific rationale for species-specific clinical application and quality control. Finally, a comprehensive safety evaluation framework extending beyond conventional acute toxicity models is essential; this should leverage advanced platforms including zebrafish embryos and organoid technologies to systematically assess the chronic, developmental, and organ-specific toxicity profiles of major constituents, thereby establishing definitive safety margins for clinical translation. By addressing these critical areas through the application of contemporary life sciences methodologies, future research can transform the therapeutic potential of AR into clinically validated, mechanism-based interventions for gastrointestinal, metabolic, and inflammatory disorders.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/molecules31061015/s1, Table S1. Traditional preparations of Atractylodis Rhizoma; Table S2. Modern preparations of Atractylodis Rhizoma; Table S3. Antimicrobial effect of Atractylodis Rhizoma; Table S4. Anti-inflammatory effect of Atractylodis Rhizoma; Table S5. Antioxidant effect of Atractylodis Rhizoma; Table S6. Hepatoprotective effect of Atractylodis Rhizoma; Table S7. Anti-cancer effect of Atractylodis Rhizoma; Table S8. Intestinal regulatory function of Atractylodis Rhizoma.

Author Contributions

J.S.: Writing—review and editing, Writing—original draft, Visualization, Methodology, Investigation, Formal analysis, Data curation, Conceptualization. J.Q.: Writing—review and editing, Visualization. J.T.: Data curation. N.C.: Supervision. M.G.: Writing—review and editing. J.Y.: Writing—review and editing, Supervision, Methodology, Funding acquisition, Conceptualization. B.K.: Writing—review and editing, Supervision, Resources, Funding acquisition, Conceptualization. All authors have read and agreed to the published version of the manuscript.

Funding

This research was supported by the National Natural Science Foundation of China (82504995), the Anhui Provincial College Student Innovation and Entrepreneurship Training Program (S202512926013), and the Bozhou University Research Start-up Project (BYKQ202536).

Institutional Review Board Statement

Not applicable.

Data Availability Statement

Not applicable.

Acknowledgments

The authors have reviewed and edited the output and take full responsibility for the content of this publication.

Conflicts of Interest

The authors declare no conflicts of interest.

Abbreviations

The following abbreviations are used in this manuscript: AR, Atractylodis Rhizoma; MIC, Minimum Inhibitory Concentration; MBC, Minimum Bactericidal Concentration; AA, arachidonic acid; TPA, tetradecanoylphorbol-13-acetate-; DPPH, 1,1-diphenyl-2-picryl-hydrazyl radical; ABTS, 2, 2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid); FRAP, ferric reducing antioxidant power; TRP, total reducing power; CUPRAC, cupric reducing antioxidant capacity; NO, Nitric Oxide; 8-OHdG, 8-Hydroxy-2′-deoxyguanosine; Aβ, Amyloid-beta; ACC, Acetyl-CoA Carboxylase; AChE, Acetylcholinesterase; ACLY, ATP-Citrate Lyase; ADAM10, A Disintegrin And Metalloproteinase 10; ADAMTS-4, A Disintegrin And Metalloproteinase with Thrombospondin Motifs 4; ADAMTS-5, A Disintegrin And Metalloproteinase with Thrombospondin Motifs 5; Aggrecan, Aggrecan; Akt, Protein Kinase B; ALP, Alkaline Phosphatase; ALT, Alanine Aminotransferase; AMPK, AMP-activated Protein Kinase; ANP, Atrial Natriuretic Peptide; AQP4, Aquaporin-4; ARE, Antioxidant Response Element; ARG-1, Arginase-1; AST, Aspartate Aminotransferase; ATP6V0D2, V-type Proton ATPase Subunit D2; BACE1, Beta-site APP Cleaving Enzyme 1; Bax, BCL2-Associated X Protein; BCL2, B-cell Lymphoma 2; BDNF, Brain-Derived Neurotrophic Factor; Bcl-2, B-cell Lymphoma 2; Bcl-xl, B-cell Lymphoma-extra Large; BNP, Brain Natriuretic Peptide; Carbamide, Urea; CAT, Catalase; CCL2, C-C Motif Chemokine Ligand 2; CD206, Cluster of Differentiation 206; CD40, Cluster of Differentiation 40; CD80, Cluster of Differentiation 80; CD86, Cluster of Differentiation 86; CDK2, Cyclin-dependent Kinase 2; CHO, Total Cholesterol; CLCC1, Chloride Channel CLIC-like 1; Claudin-1, Claudin-1; COX-2, Cyclooxygenase-2; CPT-1, Carnitine Palmitoyltransferase I; Creatinine, Creatinine; CRP, C-reactive Protein; CRT, Calreticulin; CS, Citrate Synthase; cTn-I, Cardiac Troponin I; CXCL16, C-X-C Motif Chemokine Ligand 16; CYP17A1, Cytochrome P450 Family 17 Subfamily A Member 1; CYP2b10, Cytochrome P450 Family 2 Subfamily B Member 10; CYP3a11, Cytochrome P450 Family 3 Subfamily A Member 11; DAI Score, Disease Activity Index Score; Dgat2, Diacylglycerol O-Acyltransferase 2; DR3, Death Receptor 3; ECAR, Extracellular Acidification Rate; EGFR, Epidermal Growth Factor Receptor; EMT, Epithelial–Mesenchymal Transition; ER, Endoplasmic Reticulum; ERK, Extracellular Signal-regulated Kinase; Fasn, Fatty Acid Synthase; FAK, Focal Adhesion Kinase; FGF1, Fibroblast Growth Factor 1; FGFR, Fibroblast Growth Factor Receptor; G6PD, Glucose-6-Phosphate Dehydrogenase; GABA, Gamma-Aminobutyric Acid; GAPDH, Glyceraldehyde-3-Phosphate Dehydrogenase; GDH, Glutamate Dehydrogenase; GLS, Glutaminase; GPX4, Glutathione Peroxidase 4; GPx, Glutathione Peroxidase; GR, Glutathione Reductase; GSH, Glutathione; GSDMD, Gasdermin D; GSSG, Oxidized Glutathione; GST, Glutathione S-Transferase; H2O2, Hydrogen Peroxide; HAS2, Hyaluronan Synthase 2; HAS3, Hyaluronan Synthase 3; HDL-C, High-Density Lipoprotein Cholesterol; HER2, Human Epidermal Growth Factor Receptor 2; Hes1, Hes Family BHLH Transcription Factor 1; HIF-1α, Hypoxia-Inducible Factor 1-alpha; HMGB1, High Mobility Group Box 1; HO-1, Heme Oxygenase-1; hs-CRP, High-sensitivity C-reactive Protein; HSD17B3, Hydroxysteroid 17-Beta Dehydrogenase 3; IAA, Indole-3-acetic Acid; ICAM-1, Intercellular Adhesion Molecule-1; IFN-γ, Interferon-gamma; IGF-1, Insulin-like Growth Factor 1; IKK, Inhibitor of Nuclear Factor Kappa-B Kinase; IL-1β, Interleukin-1 beta; IL-6, Interleukin-6; IL-8, Interleukin-8; IL-10, Interleukin-10; IL-12, Interleukin-12; IL-17A, Interleukin-17A; IL-18, Interleukin-18; IL-23, Interleukin-23; iNOS, Inducible Nitric Oxide Synthase; IRF1, Interferon Regulatory Factor 1; JAK2, Janus Kinase 2; JNK, c-Jun N-terminal Kinase; Keap1, Kelch-like ECH-associated Protein 1; KYNA, Kynurenic Acid; LAMP1, Lysosomal-associated Membrane Protein 1; LAMP2, Lysosomal-associated Membrane Protein 2; LDH, Lactate Dehydrogenase; LDHA, Lactate Dehydrogenase A; LDL-C, Low-Density Lipoprotein Cholesterol; LPO, Lipid Peroxidation; LPS, Lipopolysaccharide; LVEF, Left Ventricular Ejection Fraction; LVMI, Left Ventricular Mass Index; MCP-1, Monocyte Chemoattractant Protein-1; MDA, Malondialdehyde; Mdr1a, Multidrug Resistance Protein 1a; MGL-1, Macrophage Galactose-type Lectin 1; MGL-2, Macrophage Galactose-type Lectin 2; MIP-1α, Macrophage Inflammatory Protein-1 alpha; MLCK, Myosin Light Chain Kinase; MMP, Matrix Metalloproteinase; MMP-2, Matrix Metalloproteinase 2; MMP-9, Matrix Metalloproteinase 9; MMP13, Matrix Metalloproteinase 13; MPO, Myeloperoxidase; mTOR, Mammalian Target of Rapamycin; MUC2, Mucin 2; MyD88, Myeloid Differentiation Primary Response 88; NE, Norepinephrine; NF-κB, Nuclear Factor Kappa-light-chain-enhancer of Activated B cells; Ngn2, Neurogenin 2; NLRC4, NLR Family CARD Domain Containing 4; NLRP1, NLR Family Pyrin Domain Containing 1; NLRP3, NLR Family Pyrin Domain Containing 3; NCOA4, Nuclear Receptor Coactivator 4; Nrf2, Nuclear Factor Erythroid 2-Related Factor 2; OCR, Oxygen Consumption Rate; Occludin, Occludin; p21, Cyclin-dependent Kinase Inhibitor 1A; p38, p38 Mitogen-Activated Protein Kinase; p53, Tumor Protein p53; p65, Nuclear Factor NF-kappa-B p65 subunit; p70S6K, Ribosomal Protein S6 Kinase; PARP, Poly ADP-ribose Polymerase; PBLD, Phenazine Biosynthesis-Like Protein Domain-containing Protein; PD-L1, Programmed Death-Ligand 1; PECAM-1, Platelet Endothelial Cell Adhesion Molecule-1; PFKFB3, 6-Phosphofructo-2-Kinase/Fructose-2,6-Biphosphatase 3; PI3K, Phosphatidylinositol 3-Kinase; PKM2, Pyruvate Kinase M2; p-MLC, Phosphorylated Myosin Light Chain; PMN, Polymorphonuclear Neutrophil; PPARα, Peroxisome Proliferator-Activated Receptor Alpha; PGE2, Prostaglandin E2; RAGE, Receptor for Advanced Glycation Endproducts; RANTES, Regulated on Activation, Normal T Expressed and Secreted; RhoA, Ras Homolog Family Member A; ROCK, Rho-associated Coiled-coil Containing Protein Kinase; ROS, Reactive Oxygen Species; RXRa, Retinoid X Receptor Alpha; Scd2, Stearoyl-CoA Desaturase 2; Serine, Serine; SIRT1, Sirtuin 1; SNAP23, Synaptosome Associated Protein 23; SOD, Superoxide Dismutase; Srebf1, Sterol Regulatory Element Binding Transcription Factor 1; SREBP-1, Sterol Regulatory Element-Binding Protein 1; Src, Proto-oncogene Tyrosine-Protein Kinase Src; STAT1, Signal Transducer and Activator of Transcription 1; STAT3, Signal Transducer and Activator of Transcription 3; STAT6, Signal Transducer and Activator of Transcription 6; TAC, Total Antioxidant Capacity; TC, Total Cholesterol; TEER, Transepithelial Electrical Resistance; TG, Triglycerides; TGF-β1, Transforming Growth Factor Beta 1; TLR4, Toll-like Receptor 4; TNF-α, Tumor Necrosis Factor-alpha; TRAF6, TNF Receptor Associated Factor 6; TRPM8, Transient Receptor Potential Melastatin 8; TRPV1, Transient Receptor Potential Vanilloid 1; TWIST1, Twist Family BHLH Transcription Factor 1; Uric acid, Uric Acid; VDR, Vitamin D Receptor; VEGFA, Vascular Endothelial Growth Factor A; Vimentin, Vimentin; XCL1, X-C Motif Chemokine Ligand 1; xCT, Cystine/Glutamate Antiporter; XIAP, X-linked Inhibitor of Apoptosis Protein; ZEB1, Zinc Finger E-box Binding Homeobox 1; ZO-1, Zonula Occludens-1; α-SMA, Alpha-Smooth Muscle Actin.

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