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22 pages, 4194 KiB  
Article
Grain Boundary Regulation in Aggregated States of MnOx Nanofibres and the Photoelectric Properties of Their Nanocomposites Across a Broadband Light Spectrum
by Xingfa Ma, Xintao Zhang, Mingjun Gao, Ruifen Hu, You Wang and Guang Li
Coatings 2025, 15(8), 920; https://doi.org/10.3390/coatings15080920 (registering DOI) - 6 Aug 2025
Abstract
Improving charge transport in the aggregated state of nanocomposites is challenging due to the large number of defects present at grain boundaries. To enhance the charge transfer and photogenerated carrier extraction of MnOx nanofibers, a MnOx/GO (graphene oxide) nanocomposite was [...] Read more.
Improving charge transport in the aggregated state of nanocomposites is challenging due to the large number of defects present at grain boundaries. To enhance the charge transfer and photogenerated carrier extraction of MnOx nanofibers, a MnOx/GO (graphene oxide) nanocomposite was prepared. The effects of GO content and bias on the optoelectronic properties were studied. Representative light sources at 405, 650, 780, 808, 980, and 1064 nm were used to examine the photoelectric signals. The results indicate that the MnOx/GO nanocomposites have photocurrent switching behaviours from the visible region to the NIR (near-infrared) when the amount of GO added is optimised. It was also found that even with zero bias and storage of the nanocomposite sample at room temperature for over 8 years, a good photoelectric signal could still be extracted. This demonstrates that the MnOx/GO nanocomposites present a strong built-in electric field that drives the directional motion of photogenerated carriers, avoids the photogenerated carrier recombination, and reflect a good photophysical stability. The strength of the built-in electric field is strongly affected by the component ratios of the resulting nanocomposite. The formation of the built-in electric field results from interfacial charge transfer in the nanocomposite. Modulating the charge behaviour of nanocomposites can significantly improve the physicochemical properties of materials when excited by light with different wavelengths and can be used in multidisciplinary applications. Since the recombination of photogenerated electron–hole pairs is the key bottleneck in multidisciplinary fields, this study provides a simple, low-cost method of tailoring defects at grain boundaries in the aggregated state of nanocomposites. These results can be used as a reference for multidisciplinary fields with low energy consumption. Full article
23 pages, 5773 KiB  
Article
Multi-Seasonal Risk Assessment of Hydrogen Leakage, Diffusion, and Explosion in Hydrogen Refueling Station
by Yaling Liu, Yao Zeng, Guanxi Zhao, Huarong Hou, Yangfan Song and Bin Ding
Energies 2025, 18(15), 4172; https://doi.org/10.3390/en18154172 - 6 Aug 2025
Abstract
To reveal the influence mechanisms of seasonal climatic factors (wind speed, wind direction, temperature) and leakage direction on hydrogen dispersion and explosion behavior from single-source leaks at typical risk locations (hydrogen storage tanks, compressors, dispensers) in hydrogen refueling stations (HRSs), this work established [...] Read more.
To reveal the influence mechanisms of seasonal climatic factors (wind speed, wind direction, temperature) and leakage direction on hydrogen dispersion and explosion behavior from single-source leaks at typical risk locations (hydrogen storage tanks, compressors, dispensers) in hydrogen refueling stations (HRSs), this work established a full-scale 1:1 three-dimensional numerical model using the FLACS v22.2 software based on the actual layout of an HRS in Xichang, Sichuan Province. Through systematic simulations of 72 leakage scenarios (3 equipment types × 4 seasons × 6 leakage directions), the coupled effects of climatic conditions, equipment layout, and leakage direction on hydrogen dispersion patterns and explosion risks were quantitatively analyzed. The key findings indicate the following: (1) Downward leaks (−Z direction) from storage tanks tend to form large-area ground-hugging hydrogen clouds, representing the highest explosion risk (overpressure peak: 0.25 barg; flame temperature: >2500 K). Leakage from compressors (±X/−Z directions) readily affects adjacent equipment. Dispenser leaks pose relatively lower risks, but specific directions (−Y direction) coupled with wind fields may drive significant hydrogen dispersion toward station buildings. (2) Southeast/south winds during spring/summer promote outward migration of hydrogen clouds, reducing overall station risk but causing localized accumulation near storage tanks. Conversely, north/northwest winds in autumn/winter intensify hydrogen concentrations in compressor and station building areas. (3) An empirical formula integrating climatic parameters, leakage conditions, and spatial coordinates was proposed to predict hydrogen concentration (error < 20%). This model provides theoretical and data support for optimizing sensor placement, dynamically adjusting ventilation strategies, and enhancing safety design in HRSs. Full article
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14 pages, 6958 KiB  
Article
A pH-Responsive Liquid Crystal-Based Sensing Platform for the Detection of Biothiols
by Xianghao Meng, Ronghua Zhang, Xinfeng Dong, Zhongxing Wang and Li Yu
Chemosensors 2025, 13(8), 291; https://doi.org/10.3390/chemosensors13080291 - 6 Aug 2025
Abstract
Biothiols, including cysteine (Cys), homocysteine (Hcy), and glutathione (GSH), are crucial for physiological regulation and their imbalance poses severe health risks. Herein, we developed a pH-responsive liquid crystal (LC)-based sensing platform for detection of biothiols by doping 4-n-pentylbiphenyl-4-carboxylic acid (PBA) into [...] Read more.
Biothiols, including cysteine (Cys), homocysteine (Hcy), and glutathione (GSH), are crucial for physiological regulation and their imbalance poses severe health risks. Herein, we developed a pH-responsive liquid crystal (LC)-based sensing platform for detection of biothiols by doping 4-n-pentylbiphenyl-4-carboxylic acid (PBA) into 4-n-pentyl-4-cyanobiphenyl (5CB). Urease catalyzed urea hydrolysis to produce OH, triggering the deprotonation of PBA, thereby inducing a vertical alignment of LC molecules at the interface corresponding to dark optical appearances. Heavy metal ions (e.g., Hg2+) could inhibit urease activity, under which condition LC presents bright optical images and LC molecules maintain a state of tilted arrangement. However, biothiols competitively bind to Hg2+, the activity of urease is maintained which enables the occurrence of urea hydrolysis. This case triggers LC molecules to align in a vertical orientation, resulting in bright optical images. This pH-driven reorientation of LCs provides a visual readout (bright-to-dark transition) correlated with biothiol concentration. The detection limits of Cys/Hcy and GSH for the PBA-doped LC platform are 0.1 μM and 0.5 μM, respectively. Overall, this study provides a simple, label-free and low-cost strategy that has a broad application prospect for the detection of biothiols. Full article
(This article belongs to the Special Issue Feature Papers on Luminescent Sensing (Second Edition))
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25 pages, 77176 KiB  
Article
Advancing Energy Management Strategies for Hybrid Fuel Cell Vehicles: A Comparative Study of Deterministic and Fuzzy Logic Approaches
by Mohammed Essoufi, Mohammed Benzaouia, Bekkay Hajji, Abdelhamid Rabhi and Michele Calì
World Electr. Veh. J. 2025, 16(8), 444; https://doi.org/10.3390/wevj16080444 - 6 Aug 2025
Abstract
The increasing depletion of fossil fuels and their environmental impact have led to the development of fuel cell hybrid electric vehicles. By combining fuel cells with batteries, these vehicles offer greater efficiency and zero emissions. However, their energy management remains a challenge requiring [...] Read more.
The increasing depletion of fossil fuels and their environmental impact have led to the development of fuel cell hybrid electric vehicles. By combining fuel cells with batteries, these vehicles offer greater efficiency and zero emissions. However, their energy management remains a challenge requiring advanced strategies. This paper presents a comparative study of two developed energy management strategies: a deterministic rule-based approach and a fuzzy logic approach. The proposed system consists of a proton exchange membrane fuel cell (PEMFC) as the primary energy source and a lithium-ion battery as the secondary source. A comprehensive model of the hybrid powertrain is developed to evaluate energy distribution and system behaviour. The control system includes a model predictive control (MPC) method for fuel cell current regulation and a PI controller to maintain DC bus voltage stability. The proposed strategies are evaluated under standard driving cycles (UDDS and NEDC) using a simulation in MATLAB/Simulink. Key performance indicators such as fuel efficiency, hydrogen consumption, battery state-of-charge, and voltage stability are examined to assess the effectiveness of each approach. Simulation results demonstrate that the deterministic strategy offers a structured and computationally efficient solution, while the fuzzy logic approach provides greater adaptability to dynamic driving conditions, leading to improved overall energy efficiency. These findings highlight the critical role of advanced control strategies in improving FCHEV performance and offer valuable insights for future developments in hybrid-vehicle energy management. Full article
(This article belongs to the Special Issue Power and Energy Systems for E-Mobility, 2nd Edition)
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16 pages, 4197 KiB  
Review
Conformational Dynamics and Structural Transitions of Arginine Kinase: Implications for Catalysis and Allergen Control
by Sung-Min Kang
Life 2025, 15(8), 1248; https://doi.org/10.3390/life15081248 - 6 Aug 2025
Abstract
Arginine kinase is a key phosphagen kinase in invertebrates that facilitates rapid ATP regeneration by reversibly transferring phosphate groups between phosphoarginine and ADP. Structural studies have shown that the enzyme adopts distinct conformations in its ligand-free and ligand-bound states, known as the “open” [...] Read more.
Arginine kinase is a key phosphagen kinase in invertebrates that facilitates rapid ATP regeneration by reversibly transferring phosphate groups between phosphoarginine and ADP. Structural studies have shown that the enzyme adopts distinct conformations in its ligand-free and ligand-bound states, known as the “open” and “closed” forms, respectively. These conformational changes are crucial for catalytic activity, enabling precise positioning of active-site residues and loop closure during phosphoryl transfer. Transition-state analog complexes have provided additional insights by mimicking intermediate states of catalysis, supporting the functional relevance of the open/closed structural model. Furthermore, studies across multiple species reveal how monomeric and dimeric forms of arginine kinase contribute to its allosteric regulation and substrate specificity. Beyond its metabolic role, arginine kinase is also recognized as a major allergen in crustaceans. Its structural uniqueness and absence in vertebrates make it a promising candidate for selective drug targeting. By integrating crystallographic data with functional context, this review highlights conserved features and species-specific variations of arginine kinase that may inform the design of inhibitors. Such molecules have the potential to serve both as antiparasitic agents and as novel therapeutics to manage crustacean-related allergic responses in humans. Full article
(This article belongs to the Section Proteins and Proteomics)
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24 pages, 1028 KiB  
Review
Molecular Links Between Metabolism and Mental Health: Integrative Pathways from GDF15-Mediated Stress Signaling to Brain Energy Homeostasis
by Minju Seo, Seung Yeon Pyeon and Man S. Kim
Int. J. Mol. Sci. 2025, 26(15), 7611; https://doi.org/10.3390/ijms26157611 - 6 Aug 2025
Abstract
The relationship between metabolic dysfunction and mental health disorders is complex and has received increasing attention. This review integrates current research to explore how stress-related growth differentiation factor 15 (GDF15) signaling, ceramides derived from gut microbiota, and mitochondrial dysfunction in the brain interact [...] Read more.
The relationship between metabolic dysfunction and mental health disorders is complex and has received increasing attention. This review integrates current research to explore how stress-related growth differentiation factor 15 (GDF15) signaling, ceramides derived from gut microbiota, and mitochondrial dysfunction in the brain interact to influence both metabolic and psychiatric conditions. Evidence suggests that these pathways converge to regulate brain energy homeostasis through feedback mechanisms involving the autonomic nervous system and the hypothalamic–pituitary–adrenal axis. GDF15 emerges as a key stress-responsive biomarker that links peripheral metabolism with brainstem GDNF family receptor alpha-like (GFRAL)-mediated anxiety circuits. Meanwhile, ceramides impair hippocampal mitochondrial function via membrane incorporation and disruption of the respiratory chain. These disruptions may contribute to sustained pathological states such as depression, anxiety, and cognitive dysfunction. Although direct mechanistic data are limited, integrating these pathways provides a conceptual framework for understanding metabolic–psychiatric comorbidities. Furthermore, differences in age, sex, and genetics may influence these systems, highlighting the need for personalized interventions. Targeting mitochondrial function, GDF15-GFRAL signaling, and gut microbiota composition may offer new therapeutic strategies. This integrative perspective helps conceptualize how metabolic and psychiatric mechanisms interact for understanding the pathophysiology of metabolic and psychiatric comorbidities and highlights therapeutic targets for precision medicine. Full article
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20 pages, 394 KiB  
Article
Feedback Linearization for a Generalized Multivariable T-S Model
by Basil Mohammed Al-Hadithi, Javier Blanco Rico and Agustín Jiménez
Electronics 2025, 14(15), 3129; https://doi.org/10.3390/electronics14153129 - 6 Aug 2025
Abstract
This study presents a novel optimal fuzzy logic control (FLC) strategy based on feedback linearization for the regulation of multivariable nonlinear systems. Building upon an enhanced Takagi–Sugeno (T-S) model previously developed by the authors, the proposed method incorporates a refined parameter-weighting scheme to [...] Read more.
This study presents a novel optimal fuzzy logic control (FLC) strategy based on feedback linearization for the regulation of multivariable nonlinear systems. Building upon an enhanced Takagi–Sugeno (T-S) model previously developed by the authors, the proposed method incorporates a refined parameter-weighting scheme to optimize both local and global approximations within the T-S framework. This approach enables improved selection and minimization of the performance index. The effectiveness of the control strategy is validated through its application to a two-link serial robotic manipulator. The results demonstrate that the proposed FLC achieves robust performance, maintaining system stability and high accuracy even under the influence of noise and load disturbances, with well-damped system behavior and negligible steady-state error. Full article
(This article belongs to the Section Systems & Control Engineering)
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17 pages, 304 KiB  
Article
Classroom Culture Wars: Experimental Evidence of the Influence of Religion on Educational Content Regulation and Punishment
by Brady Arrenius, Cameron Shook and Andre P. Audette
Religions 2025, 16(8), 1016; https://doi.org/10.3390/rel16081016 - 6 Aug 2025
Abstract
The intersection of religion and education in the United States dates to colonial times, as do attempts by religious institutions and individuals to regulate educational content. After a prominent retreat by religious fundamentalists following the Scopes Monkey Trial, conservative Christians have once again [...] Read more.
The intersection of religion and education in the United States dates to colonial times, as do attempts by religious institutions and individuals to regulate educational content. After a prominent retreat by religious fundamentalists following the Scopes Monkey Trial, conservative Christians have once again entered political debates about educational content in the form of modern culture wars issues. Both conservatives and liberals have attempted to punish educators for political comments made in class, but the influence of religion on individual attitudes has yet to be examined. In this article, we use an original survey experiment to examine individuals’ propensity to punish a professor who makes politically charged comments in class. We also assess whether religious individuals are more likely to punish professors for comments disparaging conservatives or liberals. We find that high-attending religious individuals, including both Evangelicals and Catholics, are more likely to support punishing the professor. However, we find that the propensity to punish is not related to the target of the professor’s comments. These findings suggest a resurgence of religious interest in education as a cultural issue at the individual, and not just institutional, level and a coalition between Evangelicals and Catholics on this issue. Full article
24 pages, 1464 KiB  
Review
An Overview of the Italian Roadmap for the Implementation of Circular Economy in the Energy Transition of Buildings
by Marilena De Simone and Daniele Campagna
Buildings 2025, 15(15), 2755; https://doi.org/10.3390/buildings15152755 - 5 Aug 2025
Abstract
An important task for the European Union is to transpose agreements and international standards in regulation and directives that are binding on member states. The resultant European action plans and directives identify priority areas in the building and energy sectors where circular economy [...] Read more.
An important task for the European Union is to transpose agreements and international standards in regulation and directives that are binding on member states. The resultant European action plans and directives identify priority areas in the building and energy sectors where circular economy principles can be applied. Italy records a general circular materials rate of 20.8%, surpassing the mean European value. But low recycling rates are still registered in the construction sector. This paper aims to assess the position of Italy with respect to the European regulatory framework on circularity in the energy transition of buildings. Firstly, the government’s initiatives and technical standards are introduced and commented upon. Secondly, the study illustrates the current Italian platforms, networks, and public and private initiatives highlighting opportunities and obstacles that the energy sector has to overcome in the area of circularity. It emerges that Italian policies still use voluntary tools that are not sufficiently in line with an effective circular economy model. Moreover, data collection plays a crucial role in accelerating the implementation of future actions. Italy should consider the foundation of a National Observatory for the Circular Economy to elaborate European directives, harmonize regional policies, and promote the implementation of effective practices. Full article
(This article belongs to the Special Issue Research on Sustainable Energy Performance of Green Buildings)
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20 pages, 2299 KiB  
Article
Valorization of Waste Mineral Wool and Low-Rank Peat in the Fertilizer Industry in the Context of a Resource-Efficient Circular Economy
by Marta Huculak-Mączka, Dominik Nieweś, Kinga Marecka and Magdalena Braun-Giwerska
Sustainability 2025, 17(15), 7083; https://doi.org/10.3390/su17157083 - 5 Aug 2025
Abstract
This study aims to evaluate eco-innovative solutions in the fertilizer industry that allow for waste valorization in the context of a resource-efficient circular economy. A comprehensive reuse strategy was developed for low-rank peat and post-cultivation horticultural mineral wool, involving the extraction of valuable [...] Read more.
This study aims to evaluate eco-innovative solutions in the fertilizer industry that allow for waste valorization in the context of a resource-efficient circular economy. A comprehensive reuse strategy was developed for low-rank peat and post-cultivation horticultural mineral wool, involving the extraction of valuable humic substances from peat and residual nutrients from used mineral wool, followed by the use of both post-extraction residues to produce organic–mineral substrates. The resulting products/semifinished products were characterized in terms of their composition and properties, which met the requirements necessary to obtain the admission of this type of product to the market in accordance with the Regulation of the Minister for Agriculture and Rural Development of 18 June 2008 on the implementation of certain provisions of the Act on fertilizers and fertilization (Journal of Laws No 119, item 765). Elemental analysis, FTIR spectroscopy, and solid-state CP-MAS 13C NMR spectroscopy suggest that post-extraction peat has a relatively condensed structure with a high C content (47.4%) and a reduced O/C atomic ratio and is rich in alkyl-like matter (63.2%) but devoid of some functional groups in favor of extracted fulvic acids. Therefore, it remains a valuable organic biowaste, which, in combination with post-extraction waste mineral wool in a ratio of 60:40 and possibly the addition of mineral nutrients, allows us to obtain a completely new substrate with a bulk density of 264 g/m3, a salinity of 7.8 g/dm3 and a pH of 5.3, with an appropriate content of heavy metals and with no impurities, meeting the requirements of this type of product. A liquid fertilizer based on an extract containing previously recovered nutrients also meets the criteria in terms of quality and content of impurities and can potentially be used as a fertilizing product suitable for agricultural crops. This study demonstrates a feasible pathway for transforming specific waste streams into valuable agricultural inputs, contributing to environmental protection and sustainable production. The production of a new liquid fertilizer using nutrients recovered from post-cultivation mineral wool and the preparation of an organic–mineral substrate using post-extraction solid residue is a rational strategy for recycling hard-to-biodegrade end-of-life products. Full article
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28 pages, 3157 KiB  
Review
Deciphering Medulloblastoma: Epigenetic and Metabolic Changes Driving Tumorigenesis and Treatment Outcomes
by Jenny Bonifacio-Mundaca, Sandro Casavilca-Zambrano, Christophe Desterke, Íñigo Casafont and Jorge Mata-Garrido
Biomedicines 2025, 13(8), 1898; https://doi.org/10.3390/biomedicines13081898 - 4 Aug 2025
Abstract
Background/Objectives: Medulloblastoma is the most common malignant brain tumor in children and comprises four molecular subtypes—WNT, SHH, Group 3, and Group 4—each with distinct genetic, epigenetic, and metabolic features. Increasing evidence highlights the critical role of metabolic reprogramming and epigenetic alterations in driving [...] Read more.
Background/Objectives: Medulloblastoma is the most common malignant brain tumor in children and comprises four molecular subtypes—WNT, SHH, Group 3, and Group 4—each with distinct genetic, epigenetic, and metabolic features. Increasing evidence highlights the critical role of metabolic reprogramming and epigenetic alterations in driving tumor progression, therapy resistance, and clinical outcomes. This review aims to explore the interplay between metabolic and epigenetic mechanisms in medulloblastoma, with a focus on their functional roles and therapeutic implications. Methods: A comprehensive literature review was conducted using PubMed and relevant databases, focusing on recent studies examining metabolic pathways and epigenetic regulation in medulloblastoma subtypes. Particular attention was given to experimental findings from in vitro and in vivo models, as well as emerging preclinical therapeutic strategies targeting these pathways. Results: Medulloblastoma exhibits metabolic adaptations such as increased glycolysis, lipid biosynthesis, and altered amino acid metabolism. These changes support rapid cell proliferation and interact with the tumor microenvironment. Concurrently, epigenetic mechanisms—including DNA methylation, histone modification, chromatin remodeling, and non-coding RNA regulation—contribute to tumor aggressiveness and treatment resistance. Notably, metabolic intermediates often serve as cofactors for epigenetic enzymes, creating feedback loops that reinforce oncogenic states. Preclinical studies suggest that targeting metabolic vulnerabilities or epigenetic regulators—and particularly their combination—can suppress tumor growth and overcome resistance mechanisms. Conclusions: The metabolic–epigenetic crosstalk in medulloblastoma represents a promising area for therapeutic innovation. Understanding subtype-specific dependencies and integrating biomarkers for patient stratification could facilitate the development of precision medicine approaches that improve outcomes and reduce long-term treatment-related toxicity in pediatric patients. Full article
(This article belongs to the Special Issue Genomic Insights and Translational Opportunities for Human Cancers)
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25 pages, 1356 KiB  
Review
Mobile Thermal Energy Storage—A Review and Analysis in the Context of Waste Heat Recovery
by Marta Kuta, Agata Mlonka-Mędrala, Ewelina Radomska and Andrzej Gołdasz
Energies 2025, 18(15), 4136; https://doi.org/10.3390/en18154136 - 4 Aug 2025
Abstract
The global energy transition and increasingly rigorous legal regulations aimed at climate protection are driving the search for alternative energy sources, including renewable energy sources (RESs) and waste heat. However, the mismatch between supply and demand presents a significant challenge. Thermal energy storage [...] Read more.
The global energy transition and increasingly rigorous legal regulations aimed at climate protection are driving the search for alternative energy sources, including renewable energy sources (RESs) and waste heat. However, the mismatch between supply and demand presents a significant challenge. Thermal energy storage (TES) technologies, particularly mobile thermal energy storage (M-TES), offer a potential solution to address this gap. M-TES can not only balance supply and demand but also facilitate the transportation of heat from the source to the recipient. This paper reviews the current state of M-TES technologies, focusing on their technology readiness level, key operating parameters, and advantages and disadvantages. It is found that M-TES can be based on sensible heat, latent heat, or thermochemical reactions, with the majority of research and projects centered around latent heat storage. Regarding the type of research, significant progress has been made at the laboratory and simulation levels, while real-world implementation remains limited, with few pilot projects and commercially available systems. Despite the limited number of real-world M-TES implementations, currently existing M-TES systems can store up to 5.4 MWh in temperatures ranging from 58 °C to as high as 1300 °C. These findings highlight the potential of the M-TES and offer data for technology selection, simultaneously indicating the research gaps and future research directions. Full article
(This article belongs to the Special Issue Highly Efficient Thermal Energy Storage (TES) Technologies)
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19 pages, 7841 KiB  
Article
Co-Expression Network Analysis Suggests PacC Transcriptional Factor Involved in Botryosphaeria dothidea Pathogenicity in Chinese Hickory
by Dong Liang, Yiru Jiang, Wei Ai, Yu Zhang, Chengxing Mao, Tianlin Ma and Chuanqing Zhang
J. Fungi 2025, 11(8), 580; https://doi.org/10.3390/jof11080580 - 4 Aug 2025
Abstract
Botryosphaeria dothidea is the causative agent of Chinese hickory trunk canker, which poses significant threat to the production of Chinese hickory (Carya cathayensis Sarg.). Previous studies reported that endophytic–pathogenic phase transition, also referred to as latent infection, plays an important role in [...] Read more.
Botryosphaeria dothidea is the causative agent of Chinese hickory trunk canker, which poses significant threat to the production of Chinese hickory (Carya cathayensis Sarg.). Previous studies reported that endophytic–pathogenic phase transition, also referred to as latent infection, plays an important role in the interaction of Botryosphaeria dothidea with various host plants, including Chinese hickory. However, the mechanism underlying this phase transition is not well understood. Here, we employed RNA-Seq to investigate transcriptional changes in B. dothidea during its phase transition upon interaction with Chinese hickory. A co-expression network was generated based on 6391 differentially expressed genes (DEGs) identified from different infection stages and temperature treatments. One co-expressed module was found that highly correlated with temperature treatments which simulated conditions of B. dothidea latent infection in the field. Subsequently, 53 hub genes were detected, and gene ontology (GO) enrichment analysis revealed three categories of enriched GO terms: transmembrane transport or activity, ion homeostasis or transport, and carbohydrate metabolism. One PacC transcriptional factor (BDLA_00001555, an ambient pH regulator), and one endo-β-1,3-glucanase (BDLA_00010249) were specifically upregulated under temperature treatments that corresponded with the activation stage of B. dothidea’s pathogenic state. The knockout mutant strain of BDLA_00001555 demonstrated defective capability upon the activation of the pathogenic state. This confirmed that BDLA_00001555, the PacC transcriptional factor, plays an important role in the latent infection phase of B. dothidea. Our findings provide insights into the pathogenic mechanism of Chinese hickory trunk canker disease. Full article
(This article belongs to the Special Issue Fungal Metabolomics and Genomics, 2nd Edition)
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14 pages, 1320 KiB  
Review
Elucidating the Role of CNOT2 in Regulating Cancer Cell Growth via the Modulation of p53 and c-Myc Expression
by Jihyun Lee, Ju-Ha Kim, Yu Jin Lee, Je Joung Oh, Yeo Jeong Han and Ji Hoon Jung
Curr. Issues Mol. Biol. 2025, 47(8), 615; https://doi.org/10.3390/cimb47080615 - 4 Aug 2025
Abstract
CNOT2, a central component of the CCR4-NOT transcription complex subunit 2, plays a pivotal role in the regulation of gene expression and metabolism. CNOT2 is involved in various cellular processes, including transcriptional regulation, mRNA deadenylation, and the modulation of mRNA stability. CNOT2 [...] Read more.
CNOT2, a central component of the CCR4-NOT transcription complex subunit 2, plays a pivotal role in the regulation of gene expression and metabolism. CNOT2 is involved in various cellular processes, including transcriptional regulation, mRNA deadenylation, and the modulation of mRNA stability. CNOT2 specifically contributes to the structural integrity and enzymatic activity of the CCR4-NOT complex with transcription factors and RNA-binding proteins. Recent studies have elucidated its involvement in cellular differentiation, immune response modulation, and the maintenance of genomic stability. Abnormal regulation of CNOT2 has been implicated in a spectrum of pathological conditions, including oncogenesis, neurodegenerative disorders, and metabolic dysfunctions. This review comprehensively examines the interplay between CNOT2 and p53, elucidating their collaborative and antagonistic interactions in various cellular contexts. CNOT2 is primarily involved in transcriptional regulation, mRNA deadenylation, and the modulation of mRNA stability, thereby influencing diverse biological processes such as cell proliferation, apoptosis, and differentiation. Conversely, p53 is renowned for its role in maintaining genomic integrity, inducing cell cycle arrest, apoptosis, and senescence in response to cellular stress and DNA damage. Emerging evidence suggests that CNOT2 can modulate p53 activity through multiple mechanisms, including the regulation of p53 mRNA stability and the modulation of p53 target gene expression. The dysregulation of CNOT2 and p53 interactions has been implicated in the pathogenesis and progression of various cancers, highlighting their potential as therapeutic targets. Additionally, CNOT2 regulates c-Myc, a well-known oncogene, in cancer cells. This review shows the essential roles of CNOT2 in maintaining cancer cellular homeostasis and explores its interactions within the CCR4-NOT complex that influence transcriptional and post-transcriptional regulation. Furthermore, we investigate the potential of CNOT2 as a biomarker and therapeutic target across various disease states, highlighting its significance in disease progression and treatment responsiveness. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)
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32 pages, 2102 KiB  
Article
D* Lite and Transformer-Enhanced SAC: A Hybrid Reinforcement Learning Framework for COLREGs-Compliant Autonomous Navigation in Dynamic Maritime Environments
by Tianqing Chen, Yamei Lan, Yichen Li, Jiesen Zhang and Yijie Yin
J. Mar. Sci. Eng. 2025, 13(8), 1498; https://doi.org/10.3390/jmse13081498 - 4 Aug 2025
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Abstract
Autonomous navigation in dynamic, multi-vessel maritime environments presents a formidable challenge, demanding strict adherence to the International Regulations for Preventing Collisions at Sea (COLREGs). Conventional approaches often struggle with the dual imperatives of global path optimality and local reactive safety, and they frequently [...] Read more.
Autonomous navigation in dynamic, multi-vessel maritime environments presents a formidable challenge, demanding strict adherence to the International Regulations for Preventing Collisions at Sea (COLREGs). Conventional approaches often struggle with the dual imperatives of global path optimality and local reactive safety, and they frequently rely on simplistic state representations that fail to capture complex spatio-temporal interactions among vessels. We introduce a novel hybrid reinforcement learning framework, D* Lite + Transformer-Enhanced Soft Actor-Critic (TE-SAC), to overcome these limitations. This hierarchical framework synergizes the strengths of global and local planning. An enhanced D* Lite algorithm generates efficient, long-horizon reference paths at the global level. At the local level, the TE-SAC agent performs COLREGs-compliant tactical maneuvering. The core innovation resides in TE-SAC’s synergistic state encoder, which uniquely combines a Graph Neural Network (GNN) to model the instantaneous spatial topology of vessel encounters with a Transformer encoder to capture long-range temporal dependencies and infer vessel intent. Comprehensive simulations demonstrate the framework’s superior performance, validating the strengths of both planning layers. At the local level, our TE-SAC agent exhibits remarkable tactical intelligence, achieving an exceptional 98.7% COLREGs compliance rate and reducing energy consumption by 15–20% through smoother, more decisive maneuvers. This high-quality local control, guided by the efficient global paths from the enhanced D* Lite algorithm, culminates in a 10–32 percentage point improvement in overall task success rates compared to state-of-the-art baselines. This work presents a robust, verifiable, and efficient framework. By demonstrating superior performance and compliance with rules in high-fidelity simulations, it lays a crucial foundation for advancing the practical application of intelligent autonomous navigation systems. Full article
(This article belongs to the Special Issue Motion Control and Path Planning of Marine Vehicles—3rd Edition)
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