Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (39)

Search Parameters:
Keywords = ring-opening cyclizations

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
28 pages, 1246 KB  
Review
Research Progress in the Preparation of Lactide
by Meiqi Tian, Yingjian Zhou, Junhao Wang, Ziqi Cai, Zhipeng Li and Zhengming Gao
Polymers 2026, 18(12), 1484; https://doi.org/10.3390/polym18121484 - 12 Jun 2026
Viewed by 428
Abstract
Driven by the growing demand for sustainable polymers, polylactic acid (PLA) has attracted increasing attention due to its renewable origin and biodegradability. Lactide, the key cyclic monomer for PLA production via ring-opening polymerization (ROP), plays a decisive role in determining the molecular weight, [...] Read more.
Driven by the growing demand for sustainable polymers, polylactic acid (PLA) has attracted increasing attention due to its renewable origin and biodegradability. Lactide, the key cyclic monomer for PLA production via ring-opening polymerization (ROP), plays a decisive role in determining the molecular weight, stereoregularity, and final performance of PLA materials. However, current lactide synthesis processes still face significant challenges, including competing side reactions under high-temperature and high-vacuum conditions, difficulties in controlling stereochemical purity, and relatively high energy consumption. In this review, recent advances in lactide synthesis are systematically analyzed by examining the two principal industrial routes: the one-step process based on the direct dehydration–cyclization of lactic acid (LA), and the two-step process involving prepolymerization of LA followed by depolymerization/cyclization of oligomeric intermediates. The reaction mechanisms, key intermediates, and major side reactions—including racemization, transesterification, and deep polycondensation—are discussed, together with the regulatory roles of catalytic systems and reaction–separation coupling strategies. Comparative analysis reveals that the one-step route offers advantages in process integration and potential energy efficiency, whereas the two-step route provides superior control over stereochemical purity and process stability. Future research directions focusing on green catalysts, process intensification, and sustainable lactide production are also highlighted. Full article
Show Figures

Figure 1

14 pages, 1880 KB  
Article
Gas-Phase Formation of Acrylonitrile (CH2CHCN; X1A′) via the Reaction of the Methylidyne Radical (CH; X2Π) and Acetonitrile (CH3CN; X1A1)
by Ashleigh G. Hartwig and Alexander M. Mebel
Appl. Sci. 2026, 16(11), 5591; https://doi.org/10.3390/app16115591 - 3 Jun 2026
Viewed by 275
Abstract
Nitrogen-containing molecules are fundamental components of astrobiology and play a key role in planetary environments. These species are particularly important because they may serve as key precursors to prebiotic molecules and contribute to chemical complexity. Reactions involving the highly reactive species methylidyne (CH) [...] Read more.
Nitrogen-containing molecules are fundamental components of astrobiology and play a key role in planetary environments. These species are particularly important because they may serve as key precursors to prebiotic molecules and contribute to chemical complexity. Reactions involving the highly reactive species methylidyne (CH) play a key role in complex organic formation in astrochemical environments, yet their interactions with nitriles such as acetonitrile (CH3CN) remain relatively unexplored. In this work, we investigate the reaction network of CH + CH3CN using high-level quantum-chemical calculations with RRKM and microcanonical transition-state theories to characterize the relative energies of reactants, intermediates, transition states, and products to identify the most favorable reaction pathways. Our results reveal that the most energetically favorable reaction channels proceed via barrierless CH addition to the triple CN bond and three-membered ring opening or CH insertion into a C-H bond, followed by a hydrogen elimination to form acrylonitrile (C2H3CN). This route highlights an efficient pathway toward a molecule of astrobiological interest. Acrylonitrile is particularly significant due to its stability and dual functional groups, which enable molecular growth complexity, both in planetary atmospheres and on surfaces, under astrochemical conditions. In addition to acrylonitrile, we identified a few other competing channels leading to an isonitrile species, which emphasizes a previously unexplored aspect of isomerization chemistry in the atmospheric planetary science. These isonitrile products, while less abundant, provide insight to the diversity of nitrogen-containing molecules that may form in environments such as Titan’s atmosphere or the interstellar medium. In these environments, acrylonitrile may serve as a reactive precursor that facilitates cyclization and molecular growth, which enables the formation of nitrogen-containing polycyclic aromatic molecules and N-heterocycles. This, in turn, contributes to the emergence of larger, more complex organic species relevant to prebiotic chemistry and potential origin of life in our solar system. Full article
(This article belongs to the Special Issue Development and Application of Computational Chemistry Methods)
Show Figures

Figure 1

13 pages, 1730 KB  
Article
Straightforward Synthetic Approach to Aminoalcohols with 9-oxabicyclo[3.3.1]nonane or Cyclooctane Core via Nucleophilic Ring-Opening of Spirocyclic Bis(oxiranes)
by Olga V. Ryzhikova, Daiana V. Savchenkova, Sergey V. Kositov, Yuri K. Grishin, Olga A. Maloshitskaya, Kseniya N. Sedenkova and Elena B. Averina
Molecules 2026, 31(2), 252; https://doi.org/10.3390/molecules31020252 - 12 Jan 2026
Viewed by 765
Abstract
Nucleophilic ring-opening of bis(oxiranes), containing several reactive centers, can be used to elaborate straightforward atom-economy and stereoselective approaches to polyfunctionalized compounds. In the present work, ring-opening of cis- and trans-diastereomers of a spirocyclic bis(oxirane), containing a cyclooctane core (namely, 1,8-dioxadispiro[2.3.2.3]dodecane), upon treatment with [...] Read more.
Nucleophilic ring-opening of bis(oxiranes), containing several reactive centers, can be used to elaborate straightforward atom-economy and stereoselective approaches to polyfunctionalized compounds. In the present work, ring-opening of cis- and trans-diastereomers of a spirocyclic bis(oxirane), containing a cyclooctane core (namely, 1,8-dioxadispiro[2.3.2.3]dodecane), upon treatment with various amines, was studied. Trans-isomer afforded aminoalcohols with 9-oxabicyclo[3.3.1]nonane moiety, formed via domino-process, including opening of an oxirane ring followed by intramolecular cyclization. Ring-opening of cis-isomer gave aminosubstituted cis-cyclooctane-1,5-diols, derived from independent reaction of two oxirane moieties. Activation of oxirane rings by the addition of LiClO4, acting as a Lewis acid, allowed the involvement of a number of primary and secondary aliphatic amines as well as aniline derivatives in the reaction. Scope and limitations of the reaction were studied and a series of aminoalcohols with a 9-oxabicyclo[3.3.1]nonane core and symmetric diaminodiols with a cyclooctane core were obtained. Full article
(This article belongs to the Section Organic Chemistry)
Show Figures

Figure 1

16 pages, 1205 KB  
Article
Chemoselectively Functionalized Ketoesters by Halogenative C–C Bond Cleavage of Cyclic Diketones
by Hideyasu China, Nami Kageyama, Hodaka Yatabe, Mihoyo Fujitake, Yusei Matsumoto, Zhihan Jing and Toshifumi Dohi
Molecules 2026, 31(1), 199; https://doi.org/10.3390/molecules31010199 - 5 Jan 2026
Viewed by 1496
Abstract
Haloketoesters are synthetic intermediates in various cyclization reactions that facilitate the production of biologically active compounds. Nonetheless, the selective synthesis of dihaloketoesters and trihaloketoesters, which are expected to be highly versatile, presents significant challenges. In this study, we designed a new synthetic approach [...] Read more.
Haloketoesters are synthetic intermediates in various cyclization reactions that facilitate the production of biologically active compounds. Nonetheless, the selective synthesis of dihaloketoesters and trihaloketoesters, which are expected to be highly versatile, presents significant challenges. In this study, we designed a new synthetic approach that selectively and efficiently produces haloketoesters through the halogenative C–C bond cleavage and ring-opening reactions of cyclic 1,3-diketones. This convenient method enables the direct synthesis of di- and trichloro-functionalized ketoesters from 1,3-cyclohexadiones under mild conditions. Na2HPO4, employed as a buffer salt, proved to be effective in facilitating the alcoholytic ring-opening reaction of 2,2-dichloro-1,3-cyclohexadiones, which were generated as synthetic intermediates. Full article
(This article belongs to the Special Issue Feature Papers in Organic Chemistry—Third Edition)
Show Figures

Figure 1

12 pages, 2390 KB  
Article
Computational Investigation of Mechanism and Selectivity in (3+2) Cycloaddition Reactions Involving Azaoxyallyl Cations
by Wei Zhou, Lei Zhang, Guixian Liu, Xiaosi Ma and Xiangtai Meng
Reactions 2025, 6(4), 70; https://doi.org/10.3390/reactions6040070 - 8 Dec 2025
Viewed by 1101
Abstract
Azaoxyallyl cations, as novel and versatile three-atom components, have been widely utilized in cycloaddition reactions, with the competition between O- and N-cyclization pathways remaining a key research focus. This study investigates the mechanism and site selectivity of (3+2) cycloaddition between azaoxyallyl cations and [...] Read more.
Azaoxyallyl cations, as novel and versatile three-atom components, have been widely utilized in cycloaddition reactions, with the competition between O- and N-cyclization pathways remaining a key research focus. This study investigates the mechanism and site selectivity of (3+2) cycloaddition between azaoxyallyl cations and 1,2-benzisoxazoles using density functional theory calculations. The results reveal a stepwise (3+2) addition to the C=N double bond, followed by base-assisted N-O bond cleavage and isoxazole ring-opening, leading to oxazoline (via O-cyclization) or imidazolone (via N-cyclization) derivatives. When unsubstituted 1,2-benzisoxazole is used as the substrate, O-cyclization dominates as a kinetically controlled process due to lower activation barriers, while N-cyclization, as a thermodynamically controlled process, is minor. The presence of a methyl group at the C(3) position in 1,2-benzisoxazoles completely blocks N-O bond cleavage, forcing exclusive (3+2) cycloaddition to yield less stable tricyclic products via N-cyclization rather than O-cyclization. These findings align with experimental observations and provide new mechanistic insights into the site selectivity of azaoxyallyl cation cycloadditions. Full article
Show Figures

Figure 1

49 pages, 11537 KB  
Review
Photocyclization of Alkenes and Arenes: Penetrating Through Aromatic Armor with the Help of Excited State Antiaromaticity
by Nikolas R. Dos Santos, Judy I. Wu and Igor V. Alabugin
Chemistry 2025, 7(3), 79; https://doi.org/10.3390/chemistry7030079 - 9 May 2025
Cited by 6 | Viewed by 6004
Abstract
This review focuses on photocyclization reactions involving alkenes and arenes. Photochemistry opens up synthetic opportunities difficult for thermal methods, using light as a versatile tool to convert stable ground-state molecules into their reactive excited counterparts. This difference can be particularly striking for aromatic [...] Read more.
This review focuses on photocyclization reactions involving alkenes and arenes. Photochemistry opens up synthetic opportunities difficult for thermal methods, using light as a versatile tool to convert stable ground-state molecules into their reactive excited counterparts. This difference can be particularly striking for aromatic molecules, which, according to Baird’s rule, transform from highly stable entities into their antiaromatic “evil twins”. We highlight classical reactions, such as the photocyclization of stilbenes, to show how alkenes and aromatic rings can undergo intramolecular cyclizations to form complex structures. When possible, we explain how antiaromaticity develops in excited states and how this can expand synthetic possibilities. The review also examines how factors such as oxidants, substituents, and reaction conditions influence product selectivity, providing useful insights for improving reaction outcomes and demonstrating how photochemical methods can drive the development of new synthetic strategies. Full article
Show Figures

Graphical abstract

23 pages, 4778 KB  
Article
Enhancement of Biochar Carbon Sequestration Through Mineral Regulation: Effects and Mechanisms
by Fan Yang, Pengxiao Gao, Lin Chi, Zhongyu Gao, Yajun Wang, Liu Luo, Bo Liu, Xinyue Liu and Jingke Sima
Agronomy 2025, 15(4), 943; https://doi.org/10.3390/agronomy15040943 - 12 Apr 2025
Cited by 3 | Viewed by 3014
Abstract
The conversion of waste biomass into biochar through inert pyrolysis represents a promising strategy for carbon sequestration. However, biochar production is often accompanied by the release of small molecular chemical substances during pyrolysis, and the resulting biochar is susceptible to environmental degradation. To [...] Read more.
The conversion of waste biomass into biochar through inert pyrolysis represents a promising strategy for carbon sequestration. However, biochar production is often accompanied by the release of small molecular chemical substances during pyrolysis, and the resulting biochar is susceptible to environmental degradation. To enhance the carbon retention rate of biochar during pyrolysis and its stability in the environment, this study explored the incorporation of various metal soluble salts (CaCl2, Ca(H2PO4)2, MgCl2, FeCl3) and clay minerals (quartz, goethite, bentonite, albite) with two types of waste biomass (phragmites and goldenrod) for pre-treatment to enhance both carbon retention and stability in the resulting biochar. Furthermore, to elucidate the regulatory mechanisms of minerals on biochar structural formation, the three primary components of raw biomass—hemicellulose, cellulose, and lignin—were individually mixed with the minerals at a ratio of 1:5 (mineral/biomass, w/w) to produce biochars for a comparative analysis. The experimental results demonstrated that metal soluble salts, particularly Ca(H2PO4)2, exhibited a superior performance in enhancing biochar’s carbon retention compared to clay minerals. Specifically, Ca(H2PO4)2 treatment resulted in a remarkable 15% increase in the carbon retention rate. Through K2Cr2O7 oxidation simulating soil aging conditions, Ca(H2PO4)2-treated biochar showed approximately 12% greater stability than the untreated samples. This enhanced stability was primarily attributed to the formation of stable chemical bonds (C–O–P and P–O), which facilitated the preservation of aromatic carbon structures and small molecular compounds including sugars, alcohols, and ethers. Mechanistic investigations revealed that Ca(H2PO4)2 significantly influenced the pyrolysis process by increasing the activation energy from 85.9 kJ mol−1 to 156.5 kJ mol−1 and introducing greater reaction complexity. During the initial pyrolysis stage (<300 °C), Ca(H2PO4)2 catalyzed depolymerization, ring-opening, and C–C bond cleavage in hemicellulose, enhanced cellulose depolymerization, and side-chain cleavage in lignin phenylpropanes. In the intermediate temperature range (300–400 °C), Ca(H2PO4)2 facilitated carboxylate nucleophilic addition reactions and promoted cyclization to form aromatic carbon structures. The innovative aspect of this work is that minerals can increase both the yield and carbon retention rate of biochar. Furthermore, it reveals the mechanisms underlying the improvements in pyrolysis, providing a scientific basis and theoretical foundation for better displaying the carbon sequestration potential of biochar in future applications. Full article
Show Figures

Figure 1

19 pages, 1820 KB  
Article
Synthesis of Functionalized 1H-Imidazoles via Denitrogenative Transformation of 5-Amino-1,2,3-Triazoles
by Pavel S. Gribanov, Anna N. Philippova, Alexander F. Smol’yakov, Diana N. Tukhvatullina, Viktoria A. Vlasova, Maxim A. Topchiy, Andrey F. Asachenko and Sergey N. Osipov
Molecules 2025, 30(7), 1401; https://doi.org/10.3390/molecules30071401 - 21 Mar 2025
Cited by 1 | Viewed by 4075
Abstract
An efficient access to novel 2-substituted 1H-imidazole derivatives was developed based on acid-mediated denitrogenative transformation of 5-amino-1,2,3-triazole derivatives available through dipolar azide−nitrile cycloaddition (DCR). The proposed approach includes intramolecular cyclization of 5-amino-4-aryl-1-(2,2-diethoxyethyl) 1,2,3-triazoles followed by triazole ring opening and insertion of [...] Read more.
An efficient access to novel 2-substituted 1H-imidazole derivatives was developed based on acid-mediated denitrogenative transformation of 5-amino-1,2,3-triazole derivatives available through dipolar azide−nitrile cycloaddition (DCR). The proposed approach includes intramolecular cyclization of 5-amino-4-aryl-1-(2,2-diethoxyethyl) 1,2,3-triazoles followed by triazole ring opening and insertion of in situ formed carbene intermediate into the O-H bond of different alcohols under acidic conditions. Full article
(This article belongs to the Special Issue Synthesis and Functionalization of Nitrogen Heterocycles)
Show Figures

Graphical abstract

19 pages, 882 KB  
Article
Synthesis of Indole Derivatives via Aryl Triazole Ring-Opening and Subsequent Cyclization
by Aleksejs Burcevs, Armands Sebris, Irina Novosjolova, Anatoly Mishnev and Māris Turks
Molecules 2025, 30(2), 337; https://doi.org/10.3390/molecules30020337 - 16 Jan 2025
Viewed by 4155
Abstract
A metal-free two-step synthetic approach for obtaining indole derivatives from aryl triazole fragment-containing compounds has been developed. In the first step, the Dimroth equilibrium, followed by nitrogen extrusion, Wolff rearrangement, and amine nucleophile addition, leads to the formation of N-aryl ethene-1,1-diamines. In [...] Read more.
A metal-free two-step synthetic approach for obtaining indole derivatives from aryl triazole fragment-containing compounds has been developed. In the first step, the Dimroth equilibrium, followed by nitrogen extrusion, Wolff rearrangement, and amine nucleophile addition, leads to the formation of N-aryl ethene-1,1-diamines. In the second step, the latter intermediates are cyclized into the target 1H-indoles in the presence of iodine. The developed method ensures the synthesis of indoles that possess N-substituents at the indole C2 position. Depending on the applied N-nucleophile, the indolization step provides a selectivity either towards 1H-indoles or 1-aryl-1H-indoles. Full article
Show Figures

Graphical abstract

16 pages, 3636 KB  
Article
Molecular Decoration and Unconventional Double Bond Migration in Irumamycin Biosynthesis
by Vera A. Alferova, Anna A. Baranova, Olga A. Belozerova, Evgeny L. Gulyak, Andrey A. Mikhaylov, Yaroslav V. Solovev, Mikhail Y. Zhitlov, Arseniy A. Sinichich, Anton P. Tyurin, Ekaterina A. Trusova, Alexey V. Beletsky, Andrey V. Mardanov, Nikolai V. Ravin, Olda A. Lapchinskaya, Vladimir A. Korshun, Alexander G. Gabibov and Stanislav S. Terekhov
Antibiotics 2024, 13(12), 1167; https://doi.org/10.3390/antibiotics13121167 - 3 Dec 2024
Viewed by 2027
Abstract
Irumamycin (Iru) is a complex polyketide with pronounced antifungal activity produced by a type I polyketide (PKS) synthase. Iru features a unique hemiketal ring and an epoxide group, making its biosynthesis and the structural diversity of related compounds particularly intriguing. In this study, [...] Read more.
Irumamycin (Iru) is a complex polyketide with pronounced antifungal activity produced by a type I polyketide (PKS) synthase. Iru features a unique hemiketal ring and an epoxide group, making its biosynthesis and the structural diversity of related compounds particularly intriguing. In this study, we performed a detailed analysis of the iru biosynthetic gene cluster (BGC) to uncover the mechanisms underlying Iru formation. We examined the iru PKS, including the domain architecture of individual modules and the overall spatial structure of the PKS, and uncovered discrepancies in substrate specificity and iterative chain elongation. Two potential pathways for the formation of the hemiketal ring, involving either an olefin shift or electrocyclization, were proposed and assessed using 18O-labeling experiments and reaction activation energy calculations. Based on our findings, the hemiketal ring is likely formed by PKS-assisted double bond migration and TE domain-mediated cyclization. Furthermore, putative tailoring enzymes mediating epoxide formation specific to Iru were identified. The revealed Iru biosynthetic machinery provides insight into the complex enzymatic processes involved in Iru production, including macrocycle sculpting and decoration. These mechanistic details open new avenues for a targeted architecture of novel macrolide analogs through synthetic biology and biosynthetic engineering. Full article
Show Figures

Figure 1

14 pages, 13465 KB  
Article
Deciphering Biosynthesis Mechanism and Solution Properties of Cyclic Amylopectin
by Ruolan Li, Yaning Shi and Ming Miao
Foods 2024, 13(21), 3474; https://doi.org/10.3390/foods13213474 - 30 Oct 2024
Cited by 1 | Viewed by 1700
Abstract
A novel cyclic amylopectin (CA) was synthesized from waxy corn starch (WCS) using Bacillus stearothermophilus branching enzyme (BstBE), providing insights into its biosynthesis mechanism and solution properties. During the first 4 h, BstBE partially cyclized WCS, producing 68.20% CA with a significantly reduced [...] Read more.
A novel cyclic amylopectin (CA) was synthesized from waxy corn starch (WCS) using Bacillus stearothermophilus branching enzyme (BstBE), providing insights into its biosynthesis mechanism and solution properties. During the first 4 h, BstBE partially cyclized WCS, producing 68.20% CA with a significantly reduced molecular weight (MW), from 8.98 × 10⁶ to 3.19 × 10⁴ g/mol and a lower polymer dispersity index (PDI), decreasing from 1.97 to 1.12. This resulted in a uniform CA structure with shorter chain lengths, particularly increasing DP 3–13, especially DP 7–9. Over the subsequent 4–12 h, the PDI slightly increased to 1.18 as the CA content decreased to 50.48%, with an increase in small ring structures (DP 6–12) of CA, suggesting both ring-opening and ring-downsizing due to continued enzyme catalysis. These results propose a two-stage reaction model: initial cyclization followed bybranching and secondary cyclization. CA exhibited excellent solution properties, with BE-4 and BE-12 samples demonstrating high solubility (≥65 g/100 mL), low viscosity (<0.01 Pa·s), and over 90% light transmittance after 14 days at 4 °C, highlighting its broad application potential. Full article
(This article belongs to the Section Food Biotechnology)
Show Figures

Figure 1

15 pages, 3174 KB  
Article
Synergistic Catalytic Effects on Nitrogen Transformation during Biomass Pyrolysis: A Focus on Proline as a Model Compound
by Shan Cheng, Kehui Yao, Hong Tian, Ting Yang and Lianghui Chen
Molecules 2024, 29(13), 3118; https://doi.org/10.3390/molecules29133118 - 30 Jun 2024
Cited by 11 | Viewed by 2842
Abstract
To investigate the control mechanisms of NOx precursors and the synergistic effects of composite catalysts during proline pyrolysis, a systematic series of experiments was conducted utilizing composite catalysts with varying Fe-Ca ratios. Product distribution analysis was employed to elucidate the catalysts’ mechanisms in [...] Read more.
To investigate the control mechanisms of NOx precursors and the synergistic effects of composite catalysts during proline pyrolysis, a systematic series of experiments was conducted utilizing composite catalysts with varying Fe-Ca ratios. Product distribution analysis was employed to elucidate the catalysts’ mechanisms in reducing NOx precursor emissions. The synergistic interactions between Fe and Ca were quantitatively assessed through comparative theoretical and experimental release calculations. The results indicate that an increase in the Fe content in the catalyst led to a rise in amine concentrations from 0.9% to 2.95%, implying that Fe facilitates the generation of amine-N through ring-opening and substitution reactions. When the Fe to Ca ratio was balanced at 1:1, nitrogen predominantly participated in the formation of purines via cyclization and substitution reactions. Additionally, all composite catalysts exhibited a suppressive effect on the release of NOx precursors, attributed to their significant enhancement of solid product retention. Fe-Ca composite catalyst synergistically inhibits the release of gaseous nitrogen. Notably, the strongest synergistic effect was observed with a 1:3 Fe to Ca ratio, which reduced the release of NH3 by 38.7% and HCN by 53.6% during proline pyrolysis. This study offers valuable insights into the control of NOx precursors and the optimization of nitrogen-rich biomass pyrolysis processes. Full article
Show Figures

Graphical abstract

13 pages, 2051 KB  
Article
A Bicyclic Analog of the Linear Peptide Arodyn Is a Potent and Selective Kappa Opioid Receptor Antagonist
by Solomon A. Gisemba, Michael J. Ferracane, Thomas F. Murray and Jane V. Aldrich
Molecules 2024, 29(13), 3109; https://doi.org/10.3390/molecules29133109 - 29 Jun 2024
Cited by 2 | Viewed by 3264
Abstract
Kappa opioid receptor (KOR) antagonists have potential therapeutic applications in the treatment of stress-induced relapse to substance abuse and mood disorders. The dynorphin A analog arodyn (Ac[Phe1,2,3,Arg4,D-Ala8]dynorphin A-(1–11)-NH2) exhibits potent and selective kappa opioid receptor [...] Read more.
Kappa opioid receptor (KOR) antagonists have potential therapeutic applications in the treatment of stress-induced relapse to substance abuse and mood disorders. The dynorphin A analog arodyn (Ac[Phe1,2,3,Arg4,D-Ala8]dynorphin A-(1–11)-NH2) exhibits potent and selective kappa opioid receptor antagonism. Multiple cyclizations in longer peptides, such as dynorphin and its analogs, can extend the conformational constraint to additional regions of the peptide beyond what is typically constrained by a single cyclization. Here, we report the design, synthesis, and pharmacological evaluation of a bicyclic arodyn analog with two constraints in the opioid peptide sequence. The peptide, designed based on structure–activity relationships of monocyclic arodyn analogs, was synthesized by solid-phase peptide synthesis and cyclized by sequential ring-closing metathesis (RCM) in the C- and N-terminal sequences. Molecular modeling studies suggest similar interactions of key aromatic and basic residues in the bicyclic peptide with KOR as found in the cryoEM structure of KOR-bound dynorphin, despite substantial differences in the backbone conformations of the two peptides. The bicyclic peptide’s affinities at KOR and mu opioid receptors (MOR) were determined in radioligand binding assays, and its KOR antagonism was determined in the [35S]GTPγS assay in KOR-expressing cells. The bicyclic analog retains KOR affinity and selectivity (Ki = 26 nM, 97-fold selectivity over MOR) similar to arodyn and exhibits potent KOR antagonism in the dynorphin-stimulated [35S]GTPγS assay. This bicyclic peptide represents a promising advance in preparing cyclic opioid peptide ligands and opens avenues for the rational design of additional bicyclic opioid peptide analogs. Full article
Show Figures

Figure 1

23 pages, 1568 KB  
Article
Naphtho[1,8-de][1,2]Oxazin-4-ol: Precursor to 1,2,8-Trisubstituted Naphthalenes and 1-Unsubstituted Naphtho[1,2-d]isoxazole 2-Oxide: A Novel Isomerization of the N-Oxide to Nitrile Oxide en Route to Isoxazol(in)es
by Ioannis E. Gerontitis, Petros G. Tsoungas and George Varvounis
Molecules 2024, 29(1), 48; https://doi.org/10.3390/molecules29010048 - 20 Dec 2023
Cited by 1 | Viewed by 3216
Abstract
Naphtho[1,8-de][1,2]oxazin-4-ol and its acyl or benzyl derivatives ring open to various 2,8-dihydroxy-1-naphthonitriles, which, through (de)protection protocols and reduction, afford the target (E)-2-hydroxy-8-methoxy-1-naphthaldehyde. This was converted to its corresponding oxime, which was oxidatively o-cyclized with phenyliodine(III) diacetate (PIDA) to [...] Read more.
Naphtho[1,8-de][1,2]oxazin-4-ol and its acyl or benzyl derivatives ring open to various 2,8-dihydroxy-1-naphthonitriles, which, through (de)protection protocols and reduction, afford the target (E)-2-hydroxy-8-methoxy-1-naphthaldehyde. This was converted to its corresponding oxime, which was oxidatively o-cyclized with phenyliodine(III) diacetate (PIDA) to 9-methoxynaphtho[1,2-d]isoxazole 2-oxide. The latter, in deuterated DMSO at room temperature, was rearranged to its isomer 2-hydroxy-8-methoxy(naphthalen-1-yl)nitrile oxide. The isomerization was detected by time-course plot 1H NMR spectroscopy and further identified from its 13C NMR and HRMS spectra. The nitrile oxide was stable in (non)deuterated DMSO for at least 18 h. A 3,4-bis(2-hydroxy-8-methoxynaphthalen-1-yl)-1,2,5-oxadiazole 2-oxide, as a dimerization product or an isocyanate as a rearrangement isomer, was ruled out, the former by its HRMS spectrum and the latter by its 1,3-dipolar cycloaddition reactions to substituted isoxazoles. Full article
(This article belongs to the Section Organic Chemistry)
Show Figures

Figure 1

20 pages, 4943 KB  
Article
The Synthesis and Base-Induced Breakdown of Triaryl 1,4-Oxathiins—An Experimental and DFT Study
by Eric A. Nicol, Matthew Sing, Lilly U. Luu, Erwin J. Remigio, Michelle B. Mills and Adrian L. Schwan
Molecules 2023, 28(17), 6180; https://doi.org/10.3390/molecules28176180 - 22 Aug 2023
Cited by 1 | Viewed by 2448
Abstract
1,4-Oxathiins are valued for a breadth of bioactivities and are known commercial fungicides. This article explores a novel preparation of 2,3,6-trisubstituted 1,4-oxathiin-S,S-dioxides via the reaction of benzyl 1-alkynyl sulfones and aryl aldehydes under basic conditions. A total of 20 examples possessing exclusively a [...] Read more.
1,4-Oxathiins are valued for a breadth of bioactivities and are known commercial fungicides. This article explores a novel preparation of 2,3,6-trisubstituted 1,4-oxathiin-S,S-dioxides via the reaction of benzyl 1-alkynyl sulfones and aryl aldehydes under basic conditions. A total of 20 examples possessing exclusively a trans arrangement of the 2,3-diaryl substituents are exhibited; the products demonstrate a variation of functional groups on the aryl ring attached to the heterocyclic ring system. The preparation is hindered by the base sensitivity of the products, and a ring-opened by-product typically contaminates the reaction mixture. A DFT assessment of the overall system includes a lithium counterion and offers possible pathways for the incorporation of the aldehyde, the cyclization step and the requisite proton transfers. In addition, the DFT work reveals options for the ring opening chemistry. It appears the trans 2,3-diaryl selectivity is set during the cyclization stage of the reaction sequence. The practical work uncovers a new reaction pathway to create a family of novel 1,4-oxathiin-S,S-dioxides whereas the computational work offers an understanding of the structures and possible mechanisms involved. Full article
(This article belongs to the Special Issue Multiconfigurational and DFT Methods Applied to Chemical Systems)
Show Figures

Figure 1

Back to TopTop