Search Results (55)

Incremental computing is becoming increasingly important for processing large-scale datasets. In satellite imagery, spatial resolution, temporal depth, and large files pose significant computational challenges, requiring efficient architectures to manage processing time and resource usage. Accordingly, in this study, we propose a dynamic architecture, termed Multi-Cube, for optical satellite time series. The framework introduces a modular and baseline-aware approach that enables scalable subdivision, incremental growth, and consistent management of spatiotemporal data. Built on NetCDF, xarray, and Zarr, Multi-Cube automatically constructs stable multidimensional data cubes while minimizing redundant reprocessing, formalizing automated internal decisions governing cube subdivision, baseline reuse, and incremental updates to support recurrent monitoring workflows. Its performance was evaluated using more than 83,000 Sentinel-2 images (covering 2016–2024) across multiple areas of interest. The proposed approach achieved a 5.4× reduction in end-to-end runtime, decreasing execution time from 53 h to 9 h, while disk I/O requirements were reduced by more than two orders of magnitude compared with a traditional sequential reprocessing pipeline. The framework supports parallel execution and on-demand sub-cube extraction for responsive large-area monitoring while internally handling incremental updates and adaptive cube management without requiring manual intervention. The results demonstrate that the Multi-Cube architecture provides a decision-driven foundation for integrating dynamic Earth observation workflows with analytical modules. Full article

Background/Objectives: Polycystic ovary syndrome (PCOS) is a common endocrine–metabolic disorder in which skeletal muscle insulin resistance contributes substantially to cardiometabolic risk. Pioglitazone improves insulin sensitivity in women with PCOS, yet the underlying transcriptional changes and their potential as treatment-response biomarkers remain incompletely defined. We aimed to reanalyse skeletal muscle gene expression from pioglitazone-treated PCOS patients using modern machine learning and network approaches to identify candidate biomarkers and regulatory hubs that may support precision therapy. Methods: Public microarray data (GSE8157) from skeletal muscle of obese women with PCOS and healthy controls were reprocessed. Differentially expressed genes (DEGs) were identified and submitted to Ingenuity Pathway Analysis to infer canonical pathways, upstream regulators, and disease functions. Four supervised machine learning algorithms (logistic regression, random forest, support vector machines, and gradient boosting) were trained using multi-step feature selection and 3-fold stratified cross-validation to provide superior Exploratory Gene Analysis. Gene co-expression networks were constructed from the most informative genes to characterize network topology and hub genes. A simulated multi-omics framework combined selected transcripts with representative clinical variables to explore the potential of integrated signatures. Results: We identified 1459 DEGs in PCOS skeletal muscle following pioglitazone, highlighting immune and fibrotic signalling, interferon and epigenetic regulators (including IFNB1 and DNMT3A), and pathways linked to mitochondrial function and extracellular matrix remodelling. Within this dataset, all four machine learning models showed excellent cross-validated discrimination between PCOS and controls, based on a compact gene panel. Random forest feature importance scoring and network centrality consistently prioritized ITK, WT1, BRD1-linked loci and several long non-coding RNAs as key nodes in the co-expression network. Simulated integration of these transcripts with clinical features further stabilized discovery performance, supporting the feasibility of multi-omics biomarker signatures. Conclusions: Reanalysis of skeletal muscle transcriptomes from pioglitazone-treated women with PCOS using integrative machine learning and network methods revealed a focused set of candidate genes and regulatory hubs that robustly separate PCOS from controls in this dataset. These findings generate testable hypotheses about the immunometabolism and epigenetic mechanisms of pioglitazone action and nominate ITK, WT1, BRD1-associated loci and related network genes as promising biomarkers for future validation in larger, independent PCOS cohorts. Full article

Objectives: The aim of this study was to assess the taxonomic diversity of the microbiota associated with periapical lesions of endodontic origin and to determine whether microbial profiles vary across different populations and clinical characteristics using a unified in silico analysis of next-generation sequencing (NGS) data. Methods: Raw 16S rRNA sequencing data from three published studies were retrieved from the NCBI Sequence Read Archive and reprocessed using a standardized bioinformatics pipeline. Amplicon sequence variants were inferred using DADA2, and taxonomic assignments were performed using BLASTN against a curated 16S rRNA reference database. Alpha and beta diversity analyses were conducted using QIIME 2 and R, and differential abundance was assessed with ANCOM-BC2. Statistical comparisons were made based on population, sex, symptomatology, and other clinical metadata. Results: A total of 38 periapical lesion samples yielded 566,223 high-confidence reads assigned to 347 bacterial species. Significant differences in microbial composition were observed between geographic regions (China vs. Spain), sexes, and symptoms. Core species such as Fretibacterium sp. HMT 360 and Porphyromonas endodontalis were prevalent across datasets. Porphyromonas gingivalis and Fusobacterium nucleatum were found in abundance across all three studies. Beta diversity metrics revealed distinct clustering by study and country. Symptomatic lesions were associated with higher abundance of Alloprevotella tannerae and Prevotella oris. Conclusions: The periapical lesion microbiota is taxonomically diverse and varies significantly by geographic and clinical features. Full article

Synthetic aperture radar (SAR) automatic target recognition (ATR) plays a pivotal role in SAR image interpretation. While existing approaches predominantly rely on batch learning paradigms, their practical deployment is constrained by the sequential arrival of training data and high retraining costs. To overcome this challenge, this paper introduces a divergence-constrained incremental dictionary learning framework that enables progressive model updates without full data reprocessing. Specifically, firstly, this method learns class-specific dictionaries for each target category via sub-dictionary learning, where the learning process for a specific class does not involve data from other classes. Secondly, the intra-class divergence constraint is incorporated during sub-dictionary learning to address the challenges of significant intra-class variations and minor inter-class differences in SAR targets. Thirdly, the sparse representation coefficients of the target to be classified are solved across all sub-dictionaries, followed by the computation of corresponding reconstruction errors and intra-class divergence metrics to achieve classification. Finally, when the targets of new categories are obtained, the corresponding class-specific dictionaries are calculated and added to the learned dictionary set. In this way, the incremental update of the SAR ATR system is completed. Experimental results on the MSTAR dataset indicate that our method attains >96.62% accuracy across various incremental scenarios. Compared with other state-of-the-art methods, it demonstrates better recognition performance and robustness. Full article

Particleboard is an important forest product that can be reprocessed using wood processing by-products. This approach has the potential to achieve significant conservation of forest resources and contribute to the protection of forest ecology. Most current detection models require a significant number of tagged samples for training. However, with the advancement of industrial technology, the prevalence of surface defects in particleboard is decreasing, making the acquisition of sample data difficult and significantly limiting the effectiveness of model training. Deep reinforcement learning-based detection methods have been shown to exhibit strong generalization ability and sample utilization efficiency when the number of samples is limited. This paper focuses on the potential application of deep reinforcement learning in particleboard defect detection and proposes a novel detection method, PPOBoardNet, for the identification of five typical defects: dust spot, glue spot, scratch, sand leak and indentation. The proposed method is based on the proximal policy optimization (PPO) algorithm of the Actor-Critic framework, and defect detection is achieved by performing a series of scaling and translation operations on the mask. The method integrates the variable action space and the composite reward function and achieves the balanced optimization of different types of defect detection performance by adjusting the scaling and translation amplitude of the detection region. In addition, this paper proposes a state characterization strategy of multi-scale feature fusion, which integrates global features, local features and historical action sequences of the defect image and provides reliable guidance for action selection. On the particleboard defect dataset with limited images, PPOBoardNet achieves a mean average precision (mAP) of 79.0%, representing a 5.3% performance improvement over the YOLO series of optimal detection models. This result provides a novel technical approach to the challenge of defect detection with limited samples in the particleboard domain, with significant practical application value. Full article

In the industry, the robotic gas metal arc welding (GMAW) process has a huge range of applications, including in the automotive sector, construction companies, the shipping industry, and many more. Automatic quality inspection in robotic welding is crucial because it ensures the uniformity, strength, and safety of welded joints without the need for constant human intervention. Detecting defects in real time prevents defective products from reaching advanced production stages, reducing reprocessing costs. In addition, the use of materials is optimized by avoiding defective welds that require rework, contributing to cleaner production. This paper presents a novel dataset of robot GMAW images for experimental purposes, including human-expert segmentation and human knowledge labeling regarding the different errors that may appear in welding. In addition, it tests an automatic segmentation approach for robot GMAW quality assessment. The results presented confirm that automatic segmentation is comparable to human segmentation, guaranteeing a correct welding quality assessment to provide feedback on the robot welding process. Full article

Traditional approaches to data mining are generally designed for small, centralized, and static datasets. However, when a dataset grows at an enormous rate, the algorithms become infeasible in terms of huge consumption of computational and I/O resources. Frequent itemset mining (FIM) is one of the key algorithms in data mining and finds applications in a variety of domains; however, traditional algorithms do face problems in efficiently processing large and dynamic datasets. This research introduces a distributed incremental approximation frequent itemset mining (DIAFM) algorithm that tackles the mentioned challenges using shard-based approximation within the MapReduce framework. DIAFM minimizes the computational overhead of a program by reducing dataset scans, bypassing exact support checks, and incorporating shard-level error thresholds for an appropriate trade-off between efficiency and accuracy. Extensive experiments have demonstrated that DIAFM reduces runtime by 40–60% compared to traditional methods with losses in accuracy within 1–5%, even for datasets over 500,000 transactions. Its incremental nature ensures that new data increments are handled efficiently without needing to reprocess the entire dataset, making it particularly suitable for real-time, large-scale applications such as transaction analysis and IoT data streams. These results demonstrate the scalability, robustness, and practical applicability of DIAFM and establish it as a competitive and efficient solution for mining frequent itemsets in distributed, dynamic environments. Full article

Currently, ground-based global navigation satellite system (GNSS) techniques have become widely recognized as a reliable and effective tool for atmospheric monitoring, enabling the retrieval of zenith total delay (ZTD) and precipitable water vapor (PWV) for meteorological and climate research. The International GNSS Service analysis centers (ACs) have initiated their third reprocessing campaign, known as IGS Repro3. In this campaign, six ACs conducted a homogeneous reprocessing of the ZTD time series spanning the period from 1994 to 2022. This paper primarily focuses on ZTD products. First, the data processing strategies and station conditions of six ACs were compared and analyzed. Then, formal errors within the data were examined, followed by the implementation of quality control processes. Second, a combination method is proposed and applied to generate the final ZTD products. The resulting combined series was compared with the time series submitted by the six ACs, revealing a mean bias of 0.03 mm and a mean root mean square value of 3.02 mm. Finally, the time series submitted by the six ACs and the combined series were compared with VLBI data, radiosonde data, and ERA5 data. In comparison, the combined solution performs better than most individual analysis centers, demonstrating higher quality. Therefore, the advanced method proposed in this study and the generated high-quality dataset have considerable implications for further advancing GNSS atmospheric sensing and offer valuable insights for climate modeling and prediction. Full article

Interactive segmentation methods utilize user-provided positive and negative clicks to guide the model in accurately segmenting target objects. Compared to fully automatic medical image segmentation, these methods can achieve higher segmentation accuracy with limited image data, demonstrating significant potential in clinical applications. Typically, for each new click provided by the user, conventional interactive segmentation methods reprocess the entire network by re-inputting the click into the segmentation model, which greatly increases the user’s interaction burden and deviates from the intended goal of interactive segmentation tasks. To address this issue, we propose an efficient segmentation network, ESM-Net, for interactive medical image segmentation. It obtains high-quality segmentation masks based on the user’s initial clicks, reducing the complexity of subsequent refinement steps. Recent studies have demonstrated the strong performance of the Mamba model in various vision tasks; however, its application in interactive segmentation remains unexplored. In our study, we incorporate the Mamba module into our framework for the first time and enhance its spatial representation capabilities by developing a Spatial Augmented Convolution (SAC) module. These components are combined as the fundamental building blocks of our network. Furthermore, we designed a novel and efficient segmentation head to fuse multi-scale features extracted from the encoder, optimizing the generation of the predicted segmentation masks. Through comprehensive experiments, our method achieved state-of-the-art performance on three medical image datasets. Specifically, we achieved 1.43 NoC@90 on the Kvasir-SEG dataset, 1.57 NoC@90 on the CVC-ClinicDB polyp segmentation dataset, and 1.03 NoC@90 on the ADAM retinal disk segmentation dataset. The assessments on these three medical image datasets highlight the effectiveness of our approach in interactive medical image segmentation. Full article

As a contribution to the Integrated Marine Observing System (IMOS), the Bureau of Meteorology introduces new reprocessed Himawari-8 satellite-derived Sea Surface Temperature (SST) products. The Radiative Transfer Model and a Bayesian cloud clearing method is used to retrieve SSTs every 10 min from the geostationary satellite Himawari-8. An empirical Sensor Specific Error Statistics (SSES) model, introduced herein, is applied to calculate bias and standard deviation for the retrieved SSTs. The SST retrieval and compositing method, along with validation results, are discussed. The monthly statistics for comparisons of Himawari-8 Level 2 Product (L2P) skin SST against in situ SST quality monitoring (iQuam) in situ SST datasets, adjusted for thermal stratification, showed a mean bias of −0.2/−0.1 K and a standard deviation of 0.4–0.7 K for daytime/night-time after bias correction, where satellite zenith angles were less than 60° and the quality level was greater than 2. For ease of use, these native resolution SST data have been composited using a method introduced herein that retains retrieved measurements, to hourly, 4-hourly and daily SST products, and projected onto the rectangular IMOS 0.02 degree grid. On average, 4-hourly products cover ≈$10\%$ more of the IMOS domain, while one-night composites cover ≈$25\%$ more of the IMOS domain than a typical 1 h composite. All available Himawari-8 data have been reprocessed for the September 2015–December 2022 period. The 10 min temporal resolution of the newly developed Himawari-8 SST data enables a daily composite with enhanced spatial coverage, effectively filling in SST gaps caused by transient clouds occlusion. Anticipated benefits of the new Himawari-8 products include enhanced data quality for applications like IMOS OceanCurrent and investigations into marine thermal stress, marine heatwaves, and ocean upwelling in near-coastal regions. Full article

Over the past few decades, the oceans have stored the majority of the excess heat in the climate system resulting from anthropogenic emissions. An accurate, long-term sea surface temperature (SST) dataset is essential for monitoring and researching the changes to the global oceans. A variety of SST datasets have been produced by various institutes over the years, and here, we present a new SST data record produced originally within the Copernicus Marine Environment Monitoring Service (which is therefore named CMEMS v2.0) and assess: (1) its accuracy compared to independent observations; (2) how it compares with the previous version (named CMEMS v1.2); and (3) its performance during two major volcanic eruptions. By comparing both versions of the CMEMS datasets using independent in situ observations, we show that both datasets are within the target accuracy of 0.1 K, but that CMEMS v2.0 is closer to the ground truth. The uncertainty fields generated by the two analyses were also compared, and CMEMS v2.0 was found to provide a more accurate estimate of its own uncertainties. Frequency and vector analysis of the SST fields determined that CMEMS v2.0 feature resolution and horizontal gradients were also superior, indicating that it resolved oceanic features with greater clarity. The behavior of the two analyses during two volcanic eruption events (Mt. Pinatubo and El Chichón) was examined. A comparison with the HadSST4 gridded in situ dataset suggested a cool bias in the CMEMS v2.0 dataset versus the v1.2 dataset following the Pinatubo eruption, although a comparison with sparser buoy-only observations yielded less clear results. No clear impact of the El Chichón eruption (which was a smaller event than Mt. Pinatubo) on CMEMS v2.0 was found. Overall, with the exception of a few specific and extreme events early in the time series, CMEMS v2.0 possesses high accuracy, resolution, and stability and is recommended to users. Full article

The expected acceleration in sea level rise (SLR) throughout this century poses significant threats to coastal cities and low-lying regions. Since the early 1990s, high-precision multi-mission satellite altimetry (SA) has enabled the routine measurement of sea levels, providing a continuous 30-year record from which the mean sea level rise (global and regional) and its variability can be computed. The latest reprocessed product from CMEMS span the period from 1993 to 2020, and have enabled the acquisition of accurate sea level data within the coastal range of 0–20 km. In order to fully utilize this new dataset, we establish a global virtual network consisting of 184 virtual SA stations. We evaluate the impact of different stochastic noises on the estimation of the velocity of the sea surface height (SSH) time series using BIC_tp information criterion. In the second step, the principal component analysis (PCA) allows the common mode noise in the SSH time series to be mitigated. Finally, we analyzed the spatiotemporal characteristics and accuracy of sea level change derived from SA. Our results suggest that the stochasticity of the SSH time series is not well described by a combination of random, flicker, and white noise, but is best described by an ARFIM/ARMA/GGM process. After removing the common mode noise with PCA, about 96.7% of the times series’ RMS decreased, and most of the uncertainty associated with the computed SLR decreased. We confirm that the spatiotemporal correlations should be accounted for to yield trustworthy trends and reliable uncertainties. Our estimated SLR is 2.75 ± 0.89 mm/yr, which aligns closely with recent studies, emphasizing the robustness and consistency of our method using virtual SA stations. We additionally introduce open-source software (SA_Tool V1.0) to process the SA data and reduce noise in surface height time series to the community. Full article

Global climate change has induced a rise in sea surface temperature (SST), although this increase is not uniform across the world. Significant variations exist between coastal and offshore waters, particularly in regions affected by upwelling processes. This study focuses on the Canary Current Upwelling System (CCUS), stretching from Northwest Iberia to Northwest Africa. High-resolution remotely sensed SST data (0.05°) from the ODYSSEA Level 4 Sea Surface Temperature Reprocessed dataset were validated with in situ measurements and employed to establish a regional climatological baseline for 1982–2012. Subsequent years were compared to this baseline to construct SST anomaly maps, revealing SST changes since 2012. The study area was further divided into sub-regions for comparative analysis. Results indicate that SST consistently increased at a higher rate offshore compared to the adjacent nearshore regions. A reference dataset spanning 1951–1981 was used to gauge SST variability between the two baselines. SST exhibited a 0.59 °C increase from 1951–1981 to 1982–2012, with a slowing of SST trends beyond the 1982–2012 baseline. This research offers valuable insights into the climatological dynamics of the CCUS. These findings enhance our understanding of this critical coastal system’s climatology, laying the groundwork for future investigations into evolving climate patterns in coastal regions. Full article

The first NOAA full-mission reanalysis (RAN1) of the sea surface temperature (SST) from the two Moderate Resolution Imaging Spectroradiometers (MODIS) onboard Terra (24 February 2000–present) and Aqua (4 July 2002–present) was performed. The dataset was produced using the NOAA Advanced Clear-Sky Processor for Ocean (ACSPO) enterprise SST system from Collection 6.1 brightness temperatures (BTs) in three MODIS thermal emissive bands centered at 3.7, 11, and 12 µm with a spatial resolution of 1 km at nadir. In the initial stages of reprocessing, several instabilities in the MODIS SST time series were observed. In particular, Terra SSTs and corresponding BTs showed three ‘steps’: two on 30 October 2000 and 2 July 2001 (due to changes in the MODIS operating mode) and one on 25 April 2020 (due to a change in its nominal blackbody temperature, BBT, from 290 to 285 K). Additionally, spikes up to several tenths of a kelvin were observed during the quarterly warm-up/cool-down (WUCD) exercises, when the Terra MODIS BBT was varied. Systematic gradual drifts of ~0.025 K/decade were also seen in both Aqua and Terra SSTs over their full missions due to drifting BTs. These calibration instabilities were mitigated by debiasing MODIS BTs using the time series of observed minus modeled (‘O-M’) BTs. The RAN1 dataset was evaluated via comparisons with various in situ SSTs. The data meet the NOAA specifications for accuracy (±0.2 K) and precision (0.6 K), often by a wide margin, in a clear-sky ocean domain of 19–21%. The long-term SST drift is typically less than 0.01 K/decade for all MODIS SSTs, except for the daytime ‘subskin’ SST, for which the drift is ~0.02 K/decade. The MODIS RAN1 dataset is archived at NOAA CoastWatch and updated monthly in a delayed mode with a latency of two months. Additional archival with NASA JPL PO.DAAC is being discussed. Full article

A novel algorithm has been designed and implemented in the Climate Data Store (CDS) frame of the Copernicus Climate Change Service (C3S) with the main goal of providing high-quality GNSS-based integrated water vapour (IWV) datasets for climate research and applications. For this purpose, the related CDS GNSS datasets were primarily obtained from GNSS reprocessing campaigns, given their highest quality in adjusting systematic effects due to changes in instrumentation and data processing. The algorithm is currently applied to the International GNSS Service (IGS) tropospheric products, which are consistently extended in near real-time and date back to 2000, and to the results of a reprocessing campaign conducted by the EUREF Permanent GNSS Network (EPN repro2), covering the period from 1996 to 2014. The GNSS IWV retrieval employs ancillary meteorological data sourced from ERA5. Moreover, IWV estimates are provided with associated uncertainty, using an approach similar to that used for the Global Climate Observing System Reference Upper-Air Network (GRUAN) GNSS data product. To assess the quality of the newly introduced GNSS IWV datasets, a comparison is made against the radiosonde data from GRUAN and the Radiosounding HARMonization (RHARM) dataset as well as with the IGS repro3, which will be the next GNSS-based extension of IWV time series at CDS. The comparison indicates that the average difference in IWV among the reprocessed GNSS datasets is less than 0.1 mm. Compared to RHARM and GRUAN IWV values, a small dry bias of less than 1 mm for the GNSS IWV is detected. Additionally, the study compares GNSS IWV trends with the corresponding values derived from RHARM at selected radiosonde sites with more than ten years of data. The trends are mostly statistically significant and in good agreement. Full article