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Keywords = proton-impact ionization

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15 pages, 771 KB  
Article
Ionization of Coronene by Proton Impact in the Continuum Distorted Wave–Eikonal Initial State Approximation: Influence of Molecular Orbital Densities
by László Gulyás
Atoms 2026, 14(7), 56; https://doi.org/10.3390/atoms14070056 - 14 Jul 2026
Viewed by 412
Abstract
Single-electron emission from the coronene (C24H12) molecule induced by the impact of 100 keV H+ projectiles is investigated using the continuum distorted wave–eikonal initial state approximation within a semi-classical impact-parameter framework. Multi-center orbitals in the initial channel are [...] Read more.
Single-electron emission from the coronene (C24H12) molecule induced by the impact of 100 keV H+ projectiles is investigated using the continuum distorted wave–eikonal initial state approximation within a semi-classical impact-parameter framework. Multi-center orbitals in the initial channel are derived using the Gaussian quantum chemistry software package, while wave functions of the emitted electron in the exit channel are evaluated using a spherically averaged static potential of the molecular core. The evaluated total ionization cross sections and probabilities are compared and discussed with results obtained from a simplified description of the molecule in which the molecular geometry is ignored. The ionization cross sections of the molecular orbitals generally increase monotonically with decreasing binding energy; however, several deviations from this overall trend are observed. Both the overall trend and the deviations are interpreted in terms of information-theoretical quantities. Full article
(This article belongs to the Special Issue Electronic Dynamics in Atomic and Molecular Collisions)
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24 pages, 6547 KB  
Article
Phase Structure and Mechanical Properties of Epoxy Resin Modified with Hydroxyl-Terminated Poly(methylphenylsiloxane)
by Xixuan He, Yundong Ji, Yu Zhao, Zhenxiang Guan, Dongfeng Cao, Zhentao Luo and Shuxin Li
Polymers 2026, 18(13), 1569; https://doi.org/10.3390/polym18131569 - 24 Jun 2026
Viewed by 522
Abstract
Bisphenol A type epoxy resin has the problem of relatively high brittleness after curing. Although traditional polysiloxane toughening methods can improve toughness, they often come at the expense of strength. In this paper, methylphenyl dimethoxysilane (MPS) was used as a monomer to synthesize [...] Read more.
Bisphenol A type epoxy resin has the problem of relatively high brittleness after curing. Although traditional polysiloxane toughening methods can improve toughness, they often come at the expense of strength. In this paper, methylphenyl dimethoxysilane (MPS) was used as a monomer to synthesize end-hydroxyl poly(methylphenyl)siloxane (PMPS), which was then used to modify E51 epoxy resin. The structure and reaction degree were characterized by infrared spectroscopy, proton nuclear magnetic resonance spectroscopy, matrix-assisted laser desorption/ionization time-of-flight/time-of-flight mass spectrometry and viscosity tests. The mechanical test results show that when the PMPS content is 20 wt%, the tensile, flexural, compressive and impact strengths of the modified resin increase by 31.26%, 26.16%, 18.53% and 98.66%, respectively, compared with the unmodified resin, and the tensile and flexural elastic moduli increase by 38.36% and 32.25%, respectively. The fracture toughness increases by 60.29%, indicating that the strength, stiffness and toughness of the material have all been improved. Dynamic mechanical analysis shows that the glass transition temperature and crosslinking density of the system gradually decrease with increasing PMPS content. Thermogravimetric analysis shows that the introduction of PMPS increases the char yield and decreases the maximum thermal decomposition rate, thereby enhancing the thermal stability of the system. Microscopic morphology analysis by optical microscopy, scanning electron microscopy and atomic force microscopy shows that the system has good compatibility, and the internal different modulus phases are distributed in a network-like manner, forming a uniform co-continuous or bicontinuous phase structure. This structure effectively promotes stress transfer and energy dissipation, alleviates local stress concentration, and thus comprehensively improves the mechanical properties of the resin system. Full article
(This article belongs to the Section Polymer Analysis and Characterization)
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12 pages, 4531 KB  
Article
Atomistic Insights into Methane-Derived Molecular Evolution: Mechanisms of CH4+/CH4 Ion-Molecule Reactions
by Hiroto Tachikawa
Chemistry 2026, 8(6), 84; https://doi.org/10.3390/chemistry8060084 - 17 Jun 2026
Viewed by 455
Abstract
The chemical evolution of simple molecules into higher-order structures, such as amino acids, is a fundamental process occurring throughout the cosmos. Methane (CH4) serves as a key precursor in this evolutionary sequence and is prevalent on planetary bodies like Mars and [...] Read more.
The chemical evolution of simple molecules into higher-order structures, such as amino acids, is a fundamental process occurring throughout the cosmos. Methane (CH4) serves as a key precursor in this evolutionary sequence and is prevalent on planetary bodies like Mars and Saturn. In these environments, CH4 is frequently ionized by cosmic radiation, forming the methane radical cation (CH4+). In this study, the ion-molecule reactions between CH4+ and neutral CH4 (CH4+ + CH4 → products) were investigated using direct ab initio molecular dynamics (AIMD) simulations to elucidate the underlying reaction mechanisms. Our calculations demonstrate that proton transfer (PT) occurs efficiently, yielding the methanium ion (CH5+) and the highly reactive methyl radical (CH3): CH4+ + CH4 → CH5+ + CH3. Furthermore, the reaction outcomes exhibit a strong dependence on the impact parameter (b). Collisions at very low impact parameters (b = 0–0.2 Å) resulted in non-reactive, billiard-ball-like scattering. Within the range of b = 0.2–3.0 Å, the formation of a long-lived complex, [CH5-CH3]+, was observed. In the intermediate range of b = 3.0–5.0 Å, a proton-stripping mechanism predominated in PT channel, while collisions at b > 5.0 Å were exclusively non-reactive. The reaction mechanism was qualitatively discussed. These findings provide a detailed atomistic picture of the collision dynamics governing methane-derived molecular evolution in celestial environments. Full article
(This article belongs to the Section Physical Chemistry and Chemical Physics)
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7 pages, 984 KB  
Proceeding Paper
A New Representation of the 3C Model in the Quasi-Sturmian Approach to Ionization of Helium by Proton Impact
by Sergey Zaytsev, Lorenzo Ugo Ancarani, Darya Zaytseva, Alexander Zaytsev, Yury Popov and Konstantin Kouzakov
Phys. Sci. Forum 2026, 13(1), 10; https://doi.org/10.3390/psf2026013010 - 8 Jun 2026
Viewed by 243
Abstract
We investigate the 75 keV proton impact ionization of helium. The convoluted quasi-Sturmian approach is extended to treat both the direct ionization and the electron capture to the continuum by proposing an ansatz for the Coulomb three-body Green’s function operator, for the kernel [...] Read more.
We investigate the 75 keV proton impact ionization of helium. The convoluted quasi-Sturmian approach is extended to treat both the direct ionization and the electron capture to the continuum by proposing an ansatz for the Coulomb three-body Green’s function operator, for the kernel of which the leading asymptotic form contains the wave function of the 3C model. The resulting 3C-like model is tested numerically. Fully differential cross-sections are calculated for different energy-loss regimes and compared with recent experimental data. Full article
(This article belongs to the Proceedings of The 1st International Online Conference on Atoms)
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16 pages, 613 KB  
Article
Ionization of Helium by Proton Impact in a Quasi-Sturmian Approach Built upon the 3C Model
by Sergey A. Zaytsev, Darya S. Zaytseva, Alexander S. Zaytsev, Lorenzo U. Ancarani, Konstantin A. Kouzakov and Yury V. Popov
Atoms 2026, 14(5), 36; https://doi.org/10.3390/atoms14050036 - 26 Apr 2026
Cited by 1 | Viewed by 625
Abstract
We investigate theoretically the 75 keV proton-impact ionization of atomic helium. The convoluted quasi-Sturmian approach is extended to treat, on an equal footing, both the direct mechanism and the electron capture to the continuum. This is achieved by proposing an ansatz of the [...] Read more.
We investigate theoretically the 75 keV proton-impact ionization of atomic helium. The convoluted quasi-Sturmian approach is extended to treat, on an equal footing, both the direct mechanism and the electron capture to the continuum. This is achieved by proposing an ansatz of the Green’s function of the three-body Coulomb system (e,He+,p+) that is compatible with the well-known 3C correlated continuum wave function. The model that stems from this approximation, named 3C˜, is tested numerically using parabolic Sturmian expansions. Calculations of fully differential cross sections are presented for different regimes of energy losses, namely for ejected electron energies below, nearly equal to, and above the cusp energy. Our results are compared with recent experimental measurements and other theoretical calculations. The proposed 3C˜ model yields very encouraging results and paves the way towards a more advanced Lippmann–Schwinger approach based on the 3C model. Full article
(This article belongs to the Section Atomic, Molecular and Nuclear Spectroscopy and Collisions)
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19 pages, 2683 KB  
Article
First Major Eruption of Solar Cycle 25: Impacts of the 3 July 2021 X1.59 Solar Flare on the Ionosphere and Primary Cosmic Rays
by Vladimir A. Srećković, Nikola Veselinović, Aleksandra Kolarski, Mihailo Savić, Žarko Medić, Milica Langović and Filip Arnaut
Atmosphere 2026, 17(2), 180; https://doi.org/10.3390/atmos17020180 - 10 Feb 2026
Viewed by 922
Abstract
The X1.59 solar flare on 3 July 2021, was the first X-class flare of Solar Cycle 25 and the first since the X-class flare on 10 September 2017. This event was notable for producing a rare geomagnetic crochet, a temporary and localized perturbation [...] Read more.
The X1.59 solar flare on 3 July 2021, was the first X-class flare of Solar Cycle 25 and the first since the X-class flare on 10 September 2017. This event was notable for producing a rare geomagnetic crochet, a temporary and localized perturbation in Earth’s magnetic field during the flare’s peak. To the best of our knowledge, this study represents the first VLF-based analysis of this event, as well as the first comprehensive multi-instrument investigation of it. VLF observations from the NAA and DHO transmitters were used to investigate the ionospheric response via amplitude and phase variations. Key low ionosphere parameters, including the effective reflection height, sharpness factor, time delay and electron density profiles were derived. The results reveal rapid ionospheric responses closely correlated with X-ray flux peaks, including sudden phase and amplitude perturbations indicative of increased low ionosphere ionization and the geomagnetic crochet effect. Simultaneously, cosmic-ray measurements from ground detectors showed negligible modulation and no significant Forbush decrease, consistent with the flare’s weak and partially Earth-directed CME. Also, the spectrum of energetic protons measured in-situ in near-Earth space shows little disturbance. This integrated study demonstrates the sensitivity of the lower ionosphere to intense solar radiation and highlights the limited short-term impact on cosmic-ray and solar energetic proton flux, providing a comprehensive assessment of flare-driven space-weather effects during the early phase of Solar Cycle 25. Full article
(This article belongs to the Special Issue Advances in Observation and Simulation Studies of Ionosphere)
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11 pages, 2031 KB  
Article
Monte Carlo Simulation of the HERO Orbital Detector Calorimeter
by Orazaly Kalikulov, Nurzhan Saduyev, Yerzhan Mukhamejanov, Khussein Karatash, Ilyas Satyshev, Yeldos Sholtan, Aliya Baktoraz and Anatoliy Pan
Symmetry 2025, 17(9), 1449; https://doi.org/10.3390/sym17091449 - 4 Sep 2025
Viewed by 943
Abstract
The High-Energy Ray Observatory (HERO) is a space-based experiment designed to measure the spectrum and composition of cosmic rays using an ionization calorimeter. The instrument’s effective geometric factor is at least 12 m2·sr for protons and 16 m2·sr or [...] Read more.
The High-Energy Ray Observatory (HERO) is a space-based experiment designed to measure the spectrum and composition of cosmic rays using an ionization calorimeter. The instrument’s effective geometric factor is at least 12 m2·sr for protons and 16 m2·sr or more for nuclei and electrons. Over an exposure period of approximately 5 to 7 years, the mission will enable high-resolution, element-by-element measurements of cosmic ray spectra in the energy range of 1012 to 1016 eV per particle. A Monte Carlo simulation of the calorimeter—based on a scintillation detector with and without boron additives—was carried out using the GEANT4 software package. In this study, we examine the impact of boron additives in scintillator materials on energy resolution and their potential for discriminating between electromagnetic and hadronic components of cosmic rays. The primary objectives are to demonstrate that boron does not degrade detector characteristics and that it enables an additional timing-based method for cosmic-ray component rejection. The planned launch of the orbital experiment is scheduled for no earlier than 2029. Full article
(This article belongs to the Section C: Physics)
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17 pages, 1841 KB  
Review
An Update on Role of Ionizing Radiation to Enhance Proliferation and Differentiation of Normal Stem Cells via Activation of NRF2 Pathway: Review
by Kave Moloudi and Siamak Haghdoost
Antioxidants 2025, 14(8), 986; https://doi.org/10.3390/antiox14080986 - 11 Aug 2025
Cited by 4 | Viewed by 3670
Abstract
Ionizing radiation (IR) as a stress inducer has a significant impact on various normal stem cells differentiation through activation of various signaling pathways. Low levels of oxidative stress of IR may preserve or even enhance cell differentiation. In response to IR, reactive oxygen [...] Read more.
Ionizing radiation (IR) as a stress inducer has a significant impact on various normal stem cells differentiation through activation of various signaling pathways. Low levels of oxidative stress of IR may preserve or even enhance cell differentiation. In response to IR, reactive oxygen species (ROS) can activate various signaling pathways that promote cell differentiation, notably through the involvement of nuclear factor erythroid 2–related factor 2 (NRF2). NRF2 interacts with multiple pathways, including Wnt/β-catenin (osteogenesis), PPARγ (adipogenesis), and BDNF/TrkB (neurogenesis). This response is dose-dependent: low doses of IR activate NRF2 and support differentiation, while high doses can overwhelm the antioxidant system, resulting in cell death. However, the quality of various types of IR, such as proton and carbon ion radiation, may have a varied impact on stem cells (SCs) differentiation compared to X-rays. Hence, activation of the NRF2 signaling pathway in SCs and cell differentiation depends on the level of stress and the quality and quantity of IR. This review is an update to explore how IR modulates SCs fate toward osteogenic, adipogenic, and neurogenic lineages through the NRF2 signaling pathway. We highlight mechanistic insights, dose-dependent effects, and therapeutic implications, bridging gaps between experimental models and clinical translation. Full article
(This article belongs to the Special Issue Oxidative Stress and NRF2 in Health and Disease—2nd Edition)
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12 pages, 819 KB  
Article
Ionization of CF3CH2F by Protons and Photons
by Carlos E. Ferreira, Jorge A. de Souza-Corrêa, Alexandre B. Rocha and Antônio C. F. Santos
Atoms 2025, 13(6), 58; https://doi.org/10.3390/atoms13060058 - 18 Jun 2025
Viewed by 1373
Abstract
(1) Background: Ionizing radiation in the Earth’s atmosphere drives key chemical transformations affecting atmospheric composition. Despite their environmental relevance, experimental data on proton collisions with hydrofluorocarbons remain limited, and theoretical models for total cross-sections and stopping power are still underdeveloped. (2) Methods: This [...] Read more.
(1) Background: Ionizing radiation in the Earth’s atmosphere drives key chemical transformations affecting atmospheric composition. Despite their environmental relevance, experimental data on proton collisions with hydrofluorocarbons remain limited, and theoretical models for total cross-sections and stopping power are still underdeveloped. (2) Methods: This study applies Rudd’s semiempirical model to calculate proton impact ionization cross-sections for the CF3CH2F molecule, considering contributions from both outer and inner electron shells. The model enables the estimation of differential cross-sections and the average energy of secondary electrons. In addition, we calculate the photoionization cross-sections using a discretized representation of the continuum—the so-called pseudo-spectrum—obtained through TDDFT with PBE0 as an exchange–correlation functional and compare it with the cross-section obtained for proton impact in the high-energy limit. (3) Results: The Rudd model proves highly adaptable and suitable for numerical applications. However, its validation is hindered by the scarcity of experimental data. Existing models, such as SRIM and Bethe–Bloch, show significant discrepancies due to their limited applicability at intermediate energies and lack of molecular structure consideration. (4) Conclusions: A comparison between the Rudd and BEB models reveals strong agreement in the analyzed energy range. This consistency stems from both models accounting for the molecular structure of the target, as well as from the fact that protons and electrons possess charges of the same magnitude, supporting a coherent description of ionization processes at these energies. Full article
(This article belongs to the Special Issue Electronic, Photonic and Ionic Interactions with Atoms and Molecules)
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16 pages, 4648 KB  
Article
Semiconductor Material Damage Mechanisms Due to Non-Ionizing Energy in Space-Based Solar Systems
by Anthony Peters, Matthias Preindl and Vasilis Fthenakis
Energies 2025, 18(3), 509; https://doi.org/10.3390/en18030509 - 23 Jan 2025
Cited by 6 | Viewed by 2993
Abstract
Radiation impacts on space-based systems operating on various orbits are evaluated in this paper. Specifically, satellite operations in Low Earth Orbit (LEO), Medium Earth Orbit (MEO), and Geosynchronous Orbit (GEO) are analyzed. Special focus is given on quantifying the effect of high-energy particle [...] Read more.
Radiation impacts on space-based systems operating on various orbits are evaluated in this paper. Specifically, satellite operations in Low Earth Orbit (LEO), Medium Earth Orbit (MEO), and Geosynchronous Orbit (GEO) are analyzed. Special focus is given on quantifying the effect of high-energy particle space radiation on materials used for critical power components, where component fault can lead to total mission failure. Methods, using multiple computational platforms for the quantification of non-ionizing energy loss (NIEL) and displacement damage dose (DDD), are used to assess semiconductor damage at specific orbital altitudes. Detailed simulations were conducted for Gallium Arsenide Indium Phosphide (GaInP/GaAs/Ge) solar cells with various cover glass thicknesses, and the survivability of GaInP/GaAs/Ge cells was compared with that of Si cells. It was assessed that radiation exposure due to high-energy protons at 10,000 km is more prevalent than 20,000 km orbits and that electron bombardment is a major electronic damage culprit. For MEO at 10,000 km, MEO at 20,000 km, and GEO at 36,000 km, we determined the 1-year maximum power (Pmax) losses due to protons to be 23%, 8%, and 1% and losses due to electrons to be 11%, 14%, and 10%. Total integrated spectra Pmax losses for those altitudes are 25%, 16%, and 10%, respectively. Full article
(This article belongs to the Section A2: Solar Energy and Photovoltaic Systems)
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11 pages, 1434 KB  
Article
Emergence of Quantum Vortices in the Ionization of Helium by Proton Impact, and How to Measure Them
by Tamara A. Guarda, Francisco Navarrete and Raúl O. Barrachina
Atoms 2025, 13(1), 3; https://doi.org/10.3390/atoms13010003 - 6 Jan 2025
Viewed by 1937
Abstract
This study investigates how the presence of quantum vortices affects the ionization cross-section of helium atoms by 75 keV proton impact, with special attention to the region near the electron capture to the continuum (ECC) cusp. It has been found that these vortices [...] Read more.
This study investigates how the presence of quantum vortices affects the ionization cross-section of helium atoms by 75 keV proton impact, with special attention to the region near the electron capture to the continuum (ECC) cusp. It has been found that these vortices cause a significant reduction in the intensity of the |T|2 distribution in the low-energy region of the ECC cusp, leading to a considerable distortion that facilitates its experimental determination. Furthermore, the analysis shows that one of the vortices coincides with the Thomas angle (a parameter coming from the classical ion-electron Thomas mechanism). Full article
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11 pages, 1242 KB  
Article
Mesospheric Ozone Depletion during 2004–2024 as a Function of Solar Proton Events Intensity
by Grigoriy Doronin, Irina Mironova, Nikita Bobrov and Eugene Rozanov
Atmosphere 2024, 15(8), 944; https://doi.org/10.3390/atmos15080944 - 6 Aug 2024
Cited by 6 | Viewed by 4541
Abstract
Solar proton events (SPEs) affect the Earth’s atmosphere, causing additional ionization in the high-latitude mesosphere and stratosphere. Ionization rates from such solar proton events maximize in the stratosphere, but the formation of ozone-depleting nitrogen and hydrogen oxides begins at mesospheric altitudes. The destruction [...] Read more.
Solar proton events (SPEs) affect the Earth’s atmosphere, causing additional ionization in the high-latitude mesosphere and stratosphere. Ionization rates from such solar proton events maximize in the stratosphere, but the formation of ozone-depleting nitrogen and hydrogen oxides begins at mesospheric altitudes. The destruction of mesospheric ozone is associated with protons with energies of about 10 MeV and higher and will strongly depend on the intensity of the flux of these particles. Most studies investigating the impact of SPEs on the characteristics of the middle atmosphere have been based on either simulations or reanalysis datasets, and some studies have used satellite observations to validate model results. We study the impact of SPEs on cold-season ozone loss in both the northern and southern hemispheres using Aura MLS mesospheric ozone measurements over the 2004 to 2024 period. Here, we show how strongly SPEs can deplete polar mesospheric ozone in different hemispheres and attempt to evaluate this dependence on the intensity of solar proton events. We found that moderate SPEs consisting of protons with an energy of more than 10 MeV and a flux intensity of more than 100 pfu destroy mesospheric ozone in the northern hemisphere up to 47% and in the southern hemisphere up to 33%. For both hemispheres, the peak of winter ozone loss was observed at about 76 km. In the northern hemisphere, maximum winter ozone loss was observed on the second day after a solar proton event, but in the southern hemisphere, winter ozone depletion was already detected on the first day. In the southern hemisphere, mesospheric ozone concentrations return to pre-event levels on the ninth day after a solar proton event, but in the northern hemisphere, even on the tenth day after a solar proton event, the mesospheric ozone layer may not be fully recovered. The strong SPEs with a proton flux intensity of more than 1000 pfu lead to a maximum winter ozone loss of up to 85% in the northern hemisphere, and in the southern hemisphere winter, ozone loss reaches 73%. Full article
(This article belongs to the Special Issue Cosmic Rays, Ozone Depletion and Climate Change)
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17 pages, 5583 KB  
Article
Interaction of Protons with Noble-Gas Atoms: Total and Differential Cross Sections
by Musab Al-Ajaleen and Károly Tőkési
Atoms 2024, 12(5), 28; https://doi.org/10.3390/atoms12050028 - 7 May 2024
Cited by 2 | Viewed by 2311
Abstract
We present a classical treatment of the ionization and electron-capture processes in the interaction of protons with neutral noble-gas atoms, namely, Ne, Ar, Kr, and Xe. We used a three-body classical-trajectory Monte Carlo (CTMC) method to calculate the total (TCS) and differential (DCS) [...] Read more.
We present a classical treatment of the ionization and electron-capture processes in the interaction of protons with neutral noble-gas atoms, namely, Ne, Ar, Kr, and Xe. We used a three-body classical-trajectory Monte Carlo (CTMC) method to calculate the total (TCS) and differential (DCS) cross sections of single-electron processes. The Garvey-type model potential was employed in the CTMC model to describe the collision between the projectile and the target, accounting for the screening effect of the inactive electrons. The TCSs are evaluated for impact energies in the energy range between 0.2 keV and 50 MeV for a number of sub-shells of the targets. The ionization DCS are evaluated for an impact energy of 35 keV, focusing on the outer sub-shells only. We found that our ionization and electron-capture TCSs are in very good agreement with the previous theoretical and experimental data for all targets. Moreover, we presented single (SDCS)- and double (DDCS)-differential cross sections as a function of the energy and ejection angle of the ionized electron for all collision systems. Full article
(This article belongs to the Section Atomic, Molecular and Nuclear Spectroscopy and Collisions)
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16 pages, 3813 KB  
Article
Verification of In Vitro Anticancer Activity and Bioactive Compounds in Cordyceps Militaris-Infused Sweet Potato Shochu Spirits
by Kozue Sakao, Cho Sho, Takeshi Miyata, Kensaku Takara, Rio Oda and De-Xing Hou
Molecules 2024, 29(9), 2119; https://doi.org/10.3390/molecules29092119 - 3 May 2024
Cited by 4 | Viewed by 3014
Abstract
Many liqueurs, including spirits infused with botanicals, are crafted not only for their taste and flavor but also for potential medicinal benefits. However, the scientific evidence supporting their medicinal effects remains limited. This study aims to verify in vitro anticancer activity and bioactive [...] Read more.
Many liqueurs, including spirits infused with botanicals, are crafted not only for their taste and flavor but also for potential medicinal benefits. However, the scientific evidence supporting their medicinal effects remains limited. This study aims to verify in vitro anticancer activity and bioactive compounds in shochu spirits infused with Cordyceps militaris, a Chinese medicine. The results revealed that a bioactive fraction was eluted from the spirit extract with 40% ethanol. The infusion time impacted the inhibitory effect of the spirit extract on the proliferation of colon cancer-derived cell line HCT-116 cells, and a 21-day infusion showed the strongest inhibitory effect. Furthermore, the spirit extract was separated into four fractions, A-D, by high-performance liquid chromatography (HPLC), and Fractions B, C, and D, but not A, exerted the effects of proliferation inhibition and apoptotic induction of HCT-116 cells and HL-60 cells. Furthermore, Fractions B, C, and D were, respectively, identified as adenosine, cordycepin, and N6-(2-hydroxyethyl)-adenosine (HEA) by comprehensive chemical analyses, including proton nuclear magnetic resonance (1H-NMR), Fourier transform infrared spectroscopy (FT-IR), and electrospray ionization mass spectrometry (ESI-MS). To better understand the bioactivity mechanisms of cordycepin and HEA, the agonist and antagonist tests of the A3 adenosine receptor (A3AR) were performed. Cell viability was suppressed by cordycepin, and HEA was restored by the A3AR antagonist MR1523, suggesting that cordycepin and HEA possibly acted as agonists to activate A3ARs to inhibit cell proliferation. Molecular docking simulations revealed that both adenosine and cordycepin bound to the same pocket site of A3ARs, while HEA exhibited a different binding pattern, supporting a possible explanation for the difference in their bioactivity. Taken together, the present study demonstrated that cordycepin and HEA were major bioactive ingredients in Cordyceps militaries-infused sweet potato shochu spirits, which contributed to the in vitro anticancer activity. Full article
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12 pages, 3521 KB  
Article
Influence of Citrus sunki and Poncirus trifoliata Root Extracts on Metabolome of Phytophthora parasitica
by Héros José Maximo, Francisca Diana da Silva Araújo, Carolina Clepf Pagotto, Leonardo Pires Boava, Ronaldo José Durigan Dalio, Gustavo Henrique Bueno Duarte, Marcos Nogueira Eberlin and Marcos Antonio Machado
Metabolites 2024, 14(4), 206; https://doi.org/10.3390/metabo14040206 - 5 Apr 2024
Cited by 3 | Viewed by 2600
Abstract
Phytophthora parasitica is an oomycete pathogen that infects a broad range of crops of worldwide economic interest; among them are citrus species. In general, some Citrus and the rootstocks of related genera offer considerable resistance against P. parasitica; therefore, understanding the mechanisms [...] Read more.
Phytophthora parasitica is an oomycete pathogen that infects a broad range of crops of worldwide economic interest; among them are citrus species. In general, some Citrus and the rootstocks of related genera offer considerable resistance against P. parasitica; therefore, understanding the mechanisms involved in the virulence of this pathogen is crucial. In this work, P. parasitica secondary metabolite production was studied using matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI-MSI) and ultrahigh-performance liquid chromatography coupled with electrospray ionization quadrupole time-of-flight tandem mass spectrometry (UHPLC/ESI-Q-TOF-MS) combined with chemometric tools, and its metabolic profile was evaluated under the influence of Citrus sunki (a highly susceptible host) and Poncirus trifoliata (a resistant genotype) extracts. The root extracts of Citrus sunki had an influence on the growth and hyphae morphology, and the root extracts of P. trifoliata had an influence on the zoospore behavior. In parallel, the spatial distribution of several metabolites was revealed in P. parasitica colonies using MALDI-MSI, and the metabolite ion of m/z 246 was identified as the protonated molecule of Arg-Ala. The MALDI-MSI showed variations in the surface metabolite profile of P. parasitica under the influence of the P. trifoliata extract. The P. parasitica metabolome analysis using UHPLC-ESI-Q-TOF-MS resulted in the detection of Arg-Gln (m/z 303.1775), as well as L-arginine (m/z 175.1191) and other unidentified metabolites. Significant variations in this metabolome were detected under the influence of the plant extracts when evaluated using UHPLC-ESI-Q-TOF-MS. Both techniques proved to be complementary, offering valuable insights at the molecular level when used to assess the impact of the plant extracts on microbial physiology in vitro. The metabolites identified in this study may play significant roles in the interaction or virulence of P. parasitica, but their functional characterization remains to be analyzed. Overall, these data confirm our initial hypotheses, demonstrating that P. parasitica has the capabilities of (i) recognizing host signals and altering its reproductive programing and (ii) distinguishing between hosts with varying responses in terms of reproduction and the production of secondary metabolites. Full article
(This article belongs to the Section Plant Metabolism)
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