Search Results (369)

The rapid and accurate detection of pathogenic bacteria and viruses is critical for infectious disease control and public health protection. While conventional methods (e.g., culture, microscopy, serology, and PCR) are widely used, they are often limited by lengthy processing times, high costs, and specialized equipment requirements. In recent years, metal nanocluster (MNC)-based biosensors have emerged as powerful diagnostic platforms due to their unique optical, catalytic, and electrochemical properties. This systematic review comprehensively surveys advancements in MNC-based biosensors for bacterial and viral pathogen detection, focusing on optical (colorimetric and fluorescence) and electrochemical platforms. Three key aspects are emphasized: (1) detection mechanisms, (2) nanocluster types and properties, and (3) applications in clinical diagnostics, environmental monitoring, and food safety. The literature demonstrates that MNC-based biosensors provide high sensitivity, specificity, portability, and cost-efficiency. Moreover, the integration of nanotechnology with biosensing platforms enables real-time and point-of-care diagnostics. This review also discusses the limitations and future directions of the technology, emphasizing the need for enhanced stability, multiplex detection capability, and clinical validation. The findings offer valuable insights for developing next-generation biosensors with improved functionality and broader applicability in microbial diagnostics. Full article

The production of β-alanine from fatty acid feedstocks presents a promising synthetic strategy due to its high carbon yield. However, the excessive reducing power generated during fatty acid utilization disrupts cellular redox balance, adversely affecting metabolism and limiting the efficiency and final yield of β-alanine production. To address this challenge, we engineered a co-production system in which excess reducing equivalents generated during fatty acid β-oxidation and β-alanine biosynthesis were consumed by growth-coupled lycopene biosynthesis. The resulting dual-pathway strain, SA01, achieved 44.78 g/L β-alanine and 3.07 g/L lycopene in bioreactor fermentation, representing a 21.45% increase in β-alanine production compared to the β-alanine-producing strain WA01, and a 74.43% increase in lycopene production compared to the lycopene-producing strain LA01. Further optimization in strain SA06, involving cofactor engineering to shift redox flow from NADH to NADPH, enhanced the titers to 52.78 g/L β-alanine and 3.61 g/L lycopene. Metabolite analysis confirmed a decrease in intracellular NADH and FADH₂ levels in SA06, indicating restoration of redox balance during the late fermentation phase. Additional improvements in the fermentation process, including gradual carbon source switching, optimization of the induction strategy, and fine-tuning of conditions during both growth and bioconversion phases, resulted in further increases in product titers, reaching 72 g/L β-alanine and 6.15 g/L lycopene. This study offers valuable insights into the development of microbial co-production systems, highlighting the critical role of dynamic cofactor and redox balance management, as well as process optimization, in improving production efficiency. Full article

Microbial Electrochemistry Technology (MET) leverages the unique process of extracellular electron transfer (EET) between electroactive bacteria (EAB) and electrodes to enable various applications, such as electricity generation, bioremediation, and wastewater treatment. This review highlights significant advancements in EET mechanisms, emphasizing both outward and inward electron transfer pathways mediated by diverse electroactive microorganisms. Notably, the role of electron shuttles, genetic modifications, and innovative electrode materials are discussed as strategies to enhance EET efficiency. Recent studies illustrate the importance of redox-active molecules, such as flavins and metal nanoparticles, in facilitating electron transfer, while genetic engineering has proven effective in optimizing microbial physiology to boost EET rates. The review also examines the impact of electrode materials on microbial attachment and performance, showcasing new composites and nanostructures that enhance power output in microbial fuel cells. By synthesizing the recent findings and proposing emerging research directions, this work provides an overview of EET enhancement strategies, aiming to inform future technological innovations in bioelectrochemical systems (BESs). Full article

Microbial fuel cells (MFCs) generate electricity through the microbial oxidation of organic waste. However, the inherent electrochemical performance of carbon felt (CF) electrodes is relatively poor and requires enhancement. In this study, nickel oxide (NiO) was successfully loaded onto CF to improve its electrode performance, thereby enhancing the electricity generation capacity of MFCs during the degradation of treated wastewater. Scanning electron microscopy (SEM), X-ray diffraction (XRD), and energy diffusion spectrometer (EDS) analyses confirmed the successful deposition of NiO on the CF surface. The modification enhanced both the conductivity and capacitance of the electrode and increased the number of microbial attachment sites on the carbon fiber filaments. The prepared CF–NiO electrode was employed as the anode in an MFC, and its electrochemical and energy storage performance were evaluated. The maximum power density of the MFC with the CF–NiO anode reached 0.22 W/m², compared to 0.08 W/m² for the unmodified CF anode. Under the C1000-D1000 condition, the charge storage capacity and total charge output of the CF–NiO anode were 1290.03 C/m² and 14,150.03 C/m², respectively, which are significantly higher than the 452.9 C/m² and 6742.67 C/m² observed for the CF anode. These results indicate notable improvements in both power generation and energy storage performance. High-throughput gene sequencing of the anodic biofilm following MFC acclimation revealed that the CF–NiO anode surface hosted a higher proportion of electroactive bacteria. This suggests that the NiO modification enhances the biodegradation of organic matter and improves electricity generation efficiency. Full article

The integration of metal–organic frameworks (MOFs) with microfluidic technologies has opened new frontiers in biomedical diagnostics and therapeutics. Microfluidic chips offer precise fluid control, low reagent use, and high-throughput capabilities features further enhanced by MOFs’ ample surface area, adjustable porosity, and catalytic activity. Together, they form powerful lab-on-a-chip platforms for sensitive biosensing, drug delivery, tissue engineering, and microbial detection. This review highlights recent advances in MOF-based microfluidic systems, focusing on material innovations, fabrication methods, and diagnostic applications. Particular emphasis is placed on MOF nanozymes, which enhance biochemical reactions for multiplexed testing and rapid pathogen identification. Challenges such as stability, biocompatibility, and manufacturing scalability are addressed, along with emerging trends like responsive MOFs, AI-assisted design, and clinical translation strategies. By bridging MOF chemistry and microfluidic engineering, these systems hold great promise for next-generation biomedical technologies. Full article

Agriphotovoltaic (Agri-PV) systems are a dual-purpose solution for resolving land utilization conflicts through combining agricultural practices and photovoltaic power generation. However, the reduced light intensities and altered microclimatic conditions under PV modules may have negative effects on the productivity of crops. This study investigated whether incorporating arbuscular mycorrhizal fungi (AMF) inoculation into Agri-PV systems could mitigate such limitations for mint cultivation (Mentha arvensis and Mentha × piperita). A field trial was conducted in Bandırma, Türkiye, where both mint species were grown under and between PV panels, with and without AMF. The photosynthetically active radiation (PAR), temperature, fresh biomass, nutrient uptake, and essential oil content were evaluated. PAR was reduced by more than 90% under panels, while air temperatures were 1.0–1.6 °C lower than those in the between-panel areas. AMF inoculation significantly improved the yield and quality. In Mentha arvensis, the fresh herb yield increased by 43.4% (from 10,620 to 15,230 kg ha⁻¹), and the essential oil content reached 10.08% under between-panel mycorrhizal conditions. For Mentha × piperita, the highest menthol concentration (30.38%) was observed exclusively in between-panel plots with AMF. In contrast, the highest oil content (4.50%) was achieved under shaded, mycorrhizal conditions, indicating that both light exposure and microbial interactions shape biochemical responses. This is the first study to demonstrate the synergistic impact of AMF inoculation and agrivoltaic shading on essential oil crops. This paper presents a novel and sustainable model that enhances crop productivity and biochemical quality in solar-integrated agriculture. Full article

Plastic pollution remains a critical global environmental challenge, with conventional disposal methods contributing to ecosystem degradation. Simultaneously, energy scarcity affects numerous rural communities, limiting development opportunities. This study presents an innovative approach that integrates microbial fuel cells (MFCs) with Klebsiella oxytoca to simultaneously degrade plastic waste and generate bioelectricity. The monitoring results over 40 days revealed optimal performance on day 28, with a peak voltage of 0.714 ± 0.026 V and an electric current of 3.149 ± 0.124 mA. The biocatalyst exhibited an electrical conductivity of 140.466 ± 5.180 mS/cm and an oxidation-reduction potential of 109.519 ± 5.35 mV, indicating efficient electron transfer. Furthermore, the MFCs achieved a maximum power density of 11.391 ± 0.814 mW/cm² with a current density of 5.106 mA/cm², demonstrating their potential for sustainable energy production. Fourier transform infrared (FTIR) analysis confirmed structural modifications in the plastic, with decreased vibrational peaks indicative of polymer degradation. Additionally, scanning electron microscopy (SEM) micrographs revealed porosity and surface cracks, highlighting Klebsiella oxytoca’s biodegradation capacity. These findings establish the viability of bioelectrochemical systems for simultaneous waste remediation and renewable energy generation, paving the way for scalable applications in environmental biotechnology. By coupling microbial degradation with electricity production, this research supports the development of sustainable solutions aligned with the principles of circular economy and climate change mitigation. Full article

The projected global energy demand for 2050 drives the imperative search for alternative and environmentally friendly energy sources. An emerging and promising alternative is microbial fuel cells assisted with microalgae. This research evaluated the potential of Chlorella sp. biomass in electricity production using microbial fuel cells (MFCs) with a single chamber and activated carbon and zinc electrodes at the laboratory scale over 20 days of operation. Maximum values of voltage (1271 ± 2.52 mV), current (4.77 ± 0.02 mA), power density (247.514 mW/cm²), current density (0.551 mA/cm²), and internal resistance (200.83 ± 0.327 Ω) were obtained. The biomass-maintained pH values of 7.32 ± 0.03–7.74 ± 0.02 and peaks of electrical conductivity of 2450 ± 17.1 µS/cm and oxidation-reduction potential of 952 ± 20 mV were reached. Meanwhile, cell density and absorbance increased to average values of 2.2933 × 10⁷ ± 1.15 × 10⁶ cells/mL and 3.471 ± 0.195 absorbance units (AU), respectively. Scanning electron microscopy micrographs allowed the observation of filamentous structures of the formed biofilm attached to carbon particles, and energy-dispersive X-ray spectroscopy spectra of the anodes determined the predominance of oxygen, carbon, silicon, aluminum, and iron. Finally, this research demonstrates the great potential of Chlorella sp. biomass for sustainable bioelectricity generation in MFCs. Full article

Sludge-derived biochar (SDB) synthesized by the pyrolysis of sludge is gaining enormous interest as a sustainable solution to wastewater treatment and sludge disposal. Despite the proliferation of general biochar reviews, a focused synthesis on SDB-specific advances, particularly covering the recent surge in multifunctional wastewater treatment applications (2020–2025), receives little emphasis. In particular, a critical analysis of recent trends, application challenges, and future research directions for SDB is still limited. Unlike broader biochar reviews, this mini-review highlights the comparative advantages and limitations of SDB, identifies emerging integration strategies (e.g., bio-electrochemical systems, catalytic membranes), and outlines future research priorities toward enhancing the durability and environmental safety of SDB applications. Specifically, this review summarized the advances from 2020 to 2025, focusing exclusively on functional modifications, and practical applications of SDB across diverse wastewater treatment technologies involved in adsorption, catalytic oxidation, membrane integration, electrochemical processes and bio-treatment systems. Quantitative comparisons of adsorption capacities (e.g., >99% Cd2+ removal, >150 mg/g tetracycline adsorption) and catalytic degradation efficiencies are provided to illustrate recent improvements. The potential of SDB in evaluating traditional and emerging contaminant degradation among the Fenton-like, persulfate, and peracetic acid activation systems was emphasized. Integration with membrane technologies reduces fouling, while electrochemical applications, including microbial fuel cells, yield higher power densities. To improve the functionality of SDB-based systems in targeting contamination removal, modification strategies, i.e., thermal activation, heteroatom doping (N, S, P), and metal loading, played crucial roles. Emerging trends highlight hybrid systems and persistent free radicals for non-radical pathways. Despite progress, critical challenges persist in scalability, long-term stability, lifecycle assessments, and scale-up implementation. The targeted synthesis of this review offers valuable insights to guide the development and practical deployment of SDB in sustainable wastewater management. Full article

This review presents a comprehensive overview of recent advances in TiO₂-based photoelectrocatalysis (PEC), with an emphasis on material design strategies to enhance visible-light responsiveness and charge carrier dynamics. Key approaches—including elemental doping, defect engineering, heterojunction construction, and plasmonic enhancement—are systematically discussed in relation to their roles in modulating energy band structures and promoting charge separation. Beyond fundamental mechanisms, the review highlights the broad environmental and energy-related applications of TiO₂-driven PEC systems, encompassing the degradation of persistent organic pollutants, microbial disinfection, heavy metal removal, photoelectrochemical water splitting for hydrogen production, and CO₂ reduction. Recent progress in integrating PEC systems with energy harvesting modules to construct self-powered platforms is critically examined. Current limitations and future directions are also outlined to guide the rational development of next-generation TiO₂-based photoelectrocatalytic systems for sustainable environmental remediation and solar fuel conversion. Full article

Background: Bioinformatics is increasingly used in various scientific works. Large amounts of heterogeneous data are being generated these days. It is difficult to interpret and analyze these data effectively. Several software tools have been developed to facilitate the handling and analysis of biological data, based on specific needs. Methods: The Galaxy web platform is one of these software tools, allowing free access to users and facilitating the use of thousands of tools. Other software tools, such as Bioconda or Jupyter Notebook, facilitate the installation of tools and their dependencies. In addition to these tools, RStudio can be mentioned as a powerful interface that facilitates the use of the R programming language for data analysis and statistics. Results: The aim of this study is to provide the scientific community with guides on how to perform bioinformatics/biostatistical analyses in a simpler manner. With this work, we also try to democratize well-documented software tools to make them suitable for both bioinformaticians and non-bioinformaticians. We believe that user-friendly guides and real-life/concrete examples will provide end-users with suitable and easy-to-use methods for their bioinformatics analysis needs. Furthermore, tutorials and usage examples are available on our dedicated GitHub repository. Conclusions: These tutorials/examples (In English and/or French) could be used as pedagogical tools to promote bioinformatics analysis and offer potential solutions to several bioinformatics needs. Special emphasis is placed on microbial omics data analysis. Full article

Corn is one of the most widely produced cereals worldwide, generating large amounts of waste, represents an environmental and economic challenge. In regions such as Africa and rural areas of Peru, access to electricity is limited, affecting quality of life and economic development. This study proposes using microbial fuel cells (MFCs) to convert chicha de jora waste—a traditional fermented beverage made from corn—into electrical energy. Single-chamber MFCs with activated carbon (anode) and zinc (cathode) electrodes were used. A total of 100 ml of chicha de jora waste was added in each MFC, and three MFCs were used in total. The MFCs demonstrated the viability of chicha de jora waste as a substrate for bioelectricity generation. Key findings include a notable peak in voltage (0.833 ± 0.041 V) and current (2.794 ± 0.241 mA) on day 14, with a maximum power density of 5.651 ± 0.817 mW/cm². The pH increased from 3.689 ± 0.001 to 5.407 ± 0.071, indicating microorganisms’ degradation of organic acids. Electrical conductivity rose from 43.647 ± 1.025 mS/cm to 186.474 ± 6.517 mS/cm, suggesting ion release due to microbial activity. Chemical oxygen demand (COD) decreased from 957.32 ± 5.18 mg/L to 251.62 ± 61.15 mg/L by day 18, showing efficient degradation of organic matter. Oxidation-reduction potential (ORP) increased, reaching a maximum of 115.891 ± 4.918 mV on day 14, indicating more oxidizing conditions due to electrogenic microbial activity. Metagenomic analysis revealed Bacteroidota (48.47%) and Proteobacteria (29.83%) as the predominant phyla. This research demonstrates the potential of chicha de jora waste for bioelectricity generation in MFCs, offering a sustainable method for waste management and renewable energy production. Implementing MFC technology can reduce environmental pollution caused by corn waste and provide alternative energy sources for regions with limited access to electricity. Full article

The intensification of agricultural production due to high global demand has led to uncontrolled waste production from this industry, creating an environmental imbalance due to inadequate waste management. In developing regions, the lack of access to electricity has become a critical problem, affecting people’s health, education, and economy. To address this issue, alternative and sustainable ways of generating electricity have been explored. This research focuses on the potential of using asparagus waste in single-chamber microbial fuel cells (MFCs) at different pH levels (4, 4.7—target, 7, and 9) to achieve optimal performance. It has been demonstrated that using this substrate, the MFC at pH 7 obtained the best results on the seventh day, generating an electric current of 4.859 mA and a maximum voltage of 0.965 V. The substrate showed an oxidation-reduction potential of 312.821 mV, a chemical oxygen demand reduction of 76.47%, and an electrical conductivity of 254.854 mS/cm. Additionally, it managed to generate a power density of 2.149 mW/cm² at a current density of 5.979 mA/cm². MFCs at different pH levels (4, 4.7—target, 7, and 9) demonstrated their potential to generate electrical energy by powering an LED light when connected in series. This research holds promise in promoting sustainable energy solutions for the future. Full article

The rapid increase in agricultural waste in recent years has led to significant losses and challenges for agro-industrial companies. At the same time, the growing demand for energy to support daily human activities has prompted these companies to seek new and sustainable methods for generating electric energy, which is crucial. Sucrose extracted from fruit waste can act as a carbon source for microbial fuel cells (MFCs), as bacteria metabolize sucrose to generate electrons, producing electric current. This research aims to evaluate the potential of sucrose as an additive to enhance the use of asparagus waste as fuel in single-chamber MFCs. The samples were obtained from CUC SAC in Trujillo, Peru. This study utilized MFCs with varying sucrose concentrations: 0% (Target), 5%, 10%, and 15%. It was observed that the MFCs with 15% sucrose and 0% sucrose (Target) produced the highest electric current (5.532 mA and 3.525 mA, respectively) and voltage (1.729 V and 1.034 V) on the eighth day of operation, both operating at slightly acidic pH levels. The MFC with 15% sucrose exhibited an oxidation-reduction potential of 3.525 mA, an electrical conductivity of 294.027 mS/cm, and a reduced chemical oxygen demand of 83.14%. Additionally, the MFC-15% demonstrated the lowest internal resistance (128.749 ± 12.541 Ω) with a power density of 20.196 mW/cm² and a current density of 5.574 A/cm². Moreover, the microbial fuel cells with different sucrose concentrations were connected in series, achieving a combined voltage of 4.56 V, showcasing their capacity to generate bioelectricity. This process effectively converts plant waste into electrical energy, reducing reliance on fossil fuels, and mitigating methane emissions from the traditional anaerobic decomposition of such waste. Full article

Hydrogen (H₂) is a key energy vector in the global transition toward clean and sustainable energy systems. Among the various production methods, water electrolysis presents a promising pathway for zero-emission hydrogen generation when powered by renewables. This review provides a comprehensive evaluation of water electrolysis technologies, including alkaline (AWE), proton exchange membrane (PEMWE), solid oxide (SOEC), anion exchange membrane (AEMWE), and microbial electrolysis cells (MEC). It critically examines their material systems, catalytic strategies, operational characteristics, and recent performance advances. In addition to reviewing experimental progress, the study presents a finite element modeling (FEM) case study that evaluates thermal and mechanical responses in PEM and AWE configurations—illustrating how FEM supports design optimization and performance prediction. To broaden methodological insight, other simulation frameworks such as computational fluid dynamics (CFD), response surface methodology (RSM), and system-level modeling (e.g., Aspen Plus^®) are also discussed based on their use in recent literature. These are reviewed to guide future integration of multi-scale and multi-physics approaches in electrolyzer research. By bridging practical design, numerical simulation, and material science perspectives, this work provides a resource for researchers and engineers advancing next-generation hydrogen production systems. Full article