Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (22)

Search Parameters:
Keywords = domestic apple

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
22 pages, 503 KiB  
Article
Competitiveness of the Largest Global Exporters of Concentrated Apple Juice
by Paweł Kraciński, Paulina Stolarczyk and Łukasz Zaremba
Agriculture 2025, 15(11), 1197; https://doi.org/10.3390/agriculture15111197 - 30 May 2025
Viewed by 693
Abstract
Concentrated apple juice (AJC) is a globally traded commodity, with major producers such as China, Poland, and the United States supplying AJC to markets worldwide. The aim of this article is to determine the competitive position of the main global exporters of concentrated [...] Read more.
Concentrated apple juice (AJC) is a globally traded commodity, with major producers such as China, Poland, and the United States supplying AJC to markets worldwide. The aim of this article is to determine the competitive position of the main global exporters of concentrated apple juice. It also seeks to analyze changes in their positions over the period from 2005 to 2023. Assessing competitive position is important for several economic and business reasons, including identifying leading exporters and recognizing both growing and declining markets. The competitive position was measured using Market Share (MS) indicators, Gross and Net Export Orientation indicators (Egr, Enet), and the Revealed Comparative Advantage (RCA) index. The results reveal significant structural shifts in global AJC trade. Most notably, China’s declining competitiveness, reflected across all indicators, led to its loss of market leadership. This raises questions about the reasons for this decline and whether it presents opportunities for other exporters. This signals a broader reconfiguration in the global AJC supply chain, driven in part by domestic economic changes, such as rising consumption and decreasing export orientation. Simultaneously, other countries, particularly in Eastern Europe, show varying degrees of competitive growth, with Moldova and Ukraine emerging as key players. These trends suggest a diversification of supply sources and a more fragmented competitive landscape. Although national differences persist, the analysis indicates that structural and economic transformations, rather than short-term price signals, are driving the evolving global competitiveness in the AJC market. The observed weak correlations between prior-year apple prices and RCA confirm that broader market and policy factors play a more decisive role. Full article
(This article belongs to the Section Agricultural Economics, Policies and Rural Management)
Show Figures

Figure 1

25 pages, 5641 KiB  
Article
Inoculum of Endophytic Bacillus spp. Stimulates Growth of Ex Vitro Acclimatised Apple Plantlets
by Jurgita Vinskienė, Inga Tamošiūnė, Elena Andriūnaitė, Dalia Gelvonauskienė, Rytis Rugienius, Muhammad Fahad Hakim, Vidmantas Stanys, Odeta Buzaitė and Danas Baniulis
Plants 2025, 14(7), 1045; https://doi.org/10.3390/plants14071045 - 27 Mar 2025
Cited by 1 | Viewed by 709
Abstract
In vitro shoot culture and cryopreservation (CP) are techniques essential for the ex situ preservation of genetic resources and the production of plant propagation material of clonally propagated horticultural crops. Changes in plant-associated microbiota diversity and composition induced by in vitro cultivation and [...] Read more.
In vitro shoot culture and cryopreservation (CP) are techniques essential for the ex situ preservation of genetic resources and the production of plant propagation material of clonally propagated horticultural crops. Changes in plant-associated microbiota diversity and composition induced by in vitro cultivation and CP treatment could have a negative effect on the growth and ex vitro adaptation of the in vitro propagated shoots. Therefore, the aim of the present study was to assess changes in endophytic bacteria diversity in domestic apple tissues induced by in vitro cultivation and CP treatment and to investigate the potential of the bacterial inoculum to improve the rooting and ex vitro acclimatisation of the propagated shoots. Metataxonomic analysis revealed a variation in the endophytic bacteria diversity and taxonomic composition between the field-grown tree dormant bud and the in vitro propagated or CP-treated shoot samples of apple cv. Gala. Whereas Sphingobacteriaceae, Sphingomonadaceae, Pseudomonadaceae, and Beijerinckiaceae families were the most prevalent families in the bud samples, Enterobacteriaceae, Bacillaceae, and Lactobacillaceae were dominant in the in vitro shoots. The bacterial inoculum effect on rooting and ex vitro acclimatisation was assessed using four isolates selected by screening the endophytic isolate collection. Bacillus sp. L3.4, B. toyonensis Nt18, or a combined inoculum resulted in a 21%, 36%, and 59% increase in cumulative root length and a 41%, 46%, and 35% increase in the biomass accumulation of ex vitro acclimatised plantlets, respectively. Root zone microbiota functional diversity analysis implied that growth stimulation was not related to improved nutrient uptake but could involve a pathogen-suppressing effect. The results demonstrate that the application of plant growth-promoting bacteria can potentially improve the performance of the in vitro propagated germplasm. Full article
Show Figures

Figure 1

11 pages, 1967 KiB  
Article
The Evolution of Mechanical Properties and Cellular Structure of Apples During Freeze Drying Combined with Hot Air Drying (FD-HAD) Process
by Lili Li, Mengmeng Yang, Lewen Zhu, Wenchao Liu, Linlin Li, Weiwei Cao, Junliang Chen, Linlin Zhao, Chung Lim Law, Tongxiang Yang, Guangyue Ren and Xu Duan
Foods 2024, 13(23), 3951; https://doi.org/10.3390/foods13233951 - 7 Dec 2024
Viewed by 1476
Abstract
Apples are one of the most popular fruits in the world and have a significant share in domestic and international fruit production. Drying is a common method used to extend the shelf life of apples. However, it also induces irregular morphological changes in [...] Read more.
Apples are one of the most popular fruits in the world and have a significant share in domestic and international fruit production. Drying is a common method used to extend the shelf life of apples. However, it also induces irregular morphological changes in apples, which are essential to maintaining the structural integrity of the material. Therefore, it is necessary to understand the effect of cellular changes at the microscopic level on the macroscopic deformation of the material during drying. In this paper, the evolution of cell wall pectin fractions and viscoelastic properties of apples during freeze drying combined with hot air drying was investigated. The findings indicated that during the HAD stage, a decrease in the relaxation modulus (E1) of the samples was observed in the compression tests when the sample temperature was significantly higher than the glass transition temperature (Tg). As the difference between the two decreased, the samples exhibited increased stiffness and higher E1. The results of the pectin content analysis showed that the HAD process accelerated the loss and degradation of water-soluble pectin in the samples with high moisture content at the transition point. Simultaneously, the esterification degree of chelator-soluble pectin increased, leading to a reduction in the support provided to the cellular structure of the samples, which consequently affected their mechanical properties. These findings may provide valuable information for the application of freeze drying combined with hot air drying in the efficient processing of dried fruit and vegetable products. Full article
Show Figures

Figure 1

16 pages, 3197 KiB  
Article
Food Authentication Goes Green: Method Optimization for Origin Discrimination of Apples Using Apple Juice and ICP-MS
by Marie-Sophie Müller, Marie Oest, Sandra Scheffler, Anna Lena Horns, Nele Paasch, René Bachmann and Markus Fischer
Foods 2024, 13(23), 3783; https://doi.org/10.3390/foods13233783 - 25 Nov 2024
Cited by 2 | Viewed by 1044
Abstract
Apples are among the most important fruits worldwide and the most consumed fruit in Germany. Due to higher energy and personnel costs, domestic apples are more expensive and thus offer an incentive for mixing with foreign goods. Moreover, imported apples have a higher [...] Read more.
Apples are among the most important fruits worldwide and the most consumed fruit in Germany. Due to higher energy and personnel costs, domestic apples are more expensive and thus offer an incentive for mixing with foreign goods. Moreover, imported apples have a higher carbon footprint, which is an obstacle regarding sales in times of climate change. Not only the transport of the goods but also the analysis influences the carbon footprint. Inductively coupled plasma mass spectrometry (ICP-MS) is a powerful tool for origin discrimination. In this study, 85 apple juice samples were analyzed, whereby sample preparation for ICP-MS was optimized by eliminating the freeze-drying step and thereby reducing CO2 emissions. The CO2 emission was lowered by around 97%. The optimized method was applied to 272 apple juice samples from seven countries to create models for origin determination. The differentiation of European and non-European apples provided an accuracy of 90.9% ± 2.4%. German samples can be differentiated from other countries with an accuracy of 83.2% ± 1.4%. The regional differentiation of German samples (north vs. south) achieved an accuracy of 92.3% ± 5.4%. The results show that the optimized ICP-MS method, in which freeze-drying is not required is well suited for determining the origin of apples from apple juice. Full article
(This article belongs to the Section Food Analytical Methods)
Show Figures

Figure 1

21 pages, 5735 KiB  
Article
Drought-Stressed Apple Tree Grafted onto Different Rootstocks in a Coastal Sandy Soil: Link between Fast Chlorophyll a Fluorescence and Production Yield
by Andrea Colpo, Sara Demaria, Marzio Zaccarini, Alessandro Forlani, Antonia Senatore, Elena Marrocchino, Angela Martina and Lorenzo Ferroni
Agronomy 2024, 14(6), 1304; https://doi.org/10.3390/agronomy14061304 - 16 Jun 2024
Viewed by 3740
Abstract
Domesticated apple is a drought-sensitive species that spread from continental to Mediterranean temperate regions, where it can particularly experience prolonged water stress. One strategy to improve drought resistance in apple is engrafting on selected rootstocks. This study explores the potential of fast chlorophyll [...] Read more.
Domesticated apple is a drought-sensitive species that spread from continental to Mediterranean temperate regions, where it can particularly experience prolonged water stress. One strategy to improve drought resistance in apple is engrafting on selected rootstocks. This study explores the potential of fast chlorophyll a fluorescence for the comparison of rootstock sensitivity to drought, looking for significant correlations with fruit productivity. The experiment was conducted in a field located in the coastal Po River Plain, Northern Italy, characterized by a loamy sandy soil, particularly prone to drought (86% sand). Mature plants of apple cv. Superchief® Sandidge engrafted on three different rootstocks (CIVP21pbr, MM106, M26) were monitored throughout the summer of 2021 and compared between irrigated and non-irrigated parcels, and at the end of the season, fruit production was evaluated. Despite soil water tension only reaching −13 kPa, the non-irrigated plants experienced a small but consistent loss of Photosystem II (PSII) activity and a lesser capacity of light energy conservation in the photosynthetic electron transport chain. The fruit weight correlated with PSII photochemical indexes recorded during early drought, particularly FV/FM and PIABS; a correlation emerged between fruit number per plant and median values of electron transport parameters, including PITOT. Although all rootstocks underwent a 40% loss of productivity, the fluorescence parameters revealed a graded susceptibility to drought, M26 > CIVP21pbr > MM106, which matched well with the plant vigour. The least drought-sensitive MM106 produced less numerous but heavier fruits than the other two rootstocks. Full article
Show Figures

Figure 1

15 pages, 2468 KiB  
Article
Raising the Drying Unit for Fruits and Vegetables Energy Efficiency by Application of Thermoelectric Heat Pump
by Dmitry Tikhomirov, Aleksei Khimenko, Aleksey Kuzmichev, Dmitry Budnikov and Vadim Bolshev
Agriculture 2024, 14(6), 922; https://doi.org/10.3390/agriculture14060922 - 11 Jun 2024
Cited by 1 | Viewed by 1883
Abstract
Drying food stuffs and other materials belongs to one of the most commonly used feedstock processing techniques, featuring rather high energy consumption. The major disadvantage of conventional electric convective-type household dryers is substantial thermal energy emission into the environment with a wet exhaust, [...] Read more.
Drying food stuffs and other materials belongs to one of the most commonly used feedstock processing techniques, featuring rather high energy consumption. The major disadvantage of conventional electric convective-type household dryers is substantial thermal energy emission into the environment with a wet exhaust, worked-out drying agent. Among other principal disadvantages common to all dryers of this type, the following have to be mentioned: spatial inhomogeneity of heating a product under processing and that of drying agent distribution due to its temperature reduction and relative humidity growth as it moves upwards. A block diagram and a breadboard model of a convective-type thermoelectric dryer employing a thermoelectric heat pump have been designed. In our approach, a product is treated with the help of a drying agent (normally, heated air) with partial exhaust-air recirculation and heat recovery. Laboratory studies of the drying process have been carried out using apple fruits as a test material in order to evaluate the power consumed for evaporation of 1 kg of water in the newly developed convective-type thermoelectric drying unit. Physical parameters of apple fruits before and after drying both in the thermoelectric drying unit and in a conventional series-produced convective-type domestic dryer have been reported. The energy efficiency of the newly designed drying unit has been compared with that of some series-produced samples. It has been found out that, unlike conventional convective-type dryers, the breadboard model of the developed thermoelectric drying unit features a smoother product drying process owing to the presence of side air channels and more effective drying agent path organization in the processing chamber. This conclusion was supported by the results of the carried out tests. Application of thermoelectric heat pumps with the function of the exhaust drying agent heat recovery will make it possible to reduce the drying agent heater installed capacity and the power consumed by the newly designed convective-type thermoelectric drying unit by up to 20% in the course of the drying process, compared to series-produced household convective-type dryers. Full article
(This article belongs to the Special Issue New Energy-Powered Agricultural Machinery and Equipment)
Show Figures

Figure 1

13 pages, 823 KiB  
Review
Research Progress on Cuttings of Malus Rootstock Resources in China
by Dajiang Wang, Guangyi Wang, Simiao Sun, Xiang Lu, Zhao Liu, Lin Wang, Wen Tian, Zichen Li, Lianwen Li, Yuan Gao and Kun Wang
Horticulturae 2024, 10(3), 217; https://doi.org/10.3390/horticulturae10030217 - 24 Feb 2024
Cited by 6 | Viewed by 2189
Abstract
Apple (Malus Mill.) is one of the most important fruits in China, and it boasts the world’s largest cultivation area and yield. It needs to be grafted onto rootstocks to maintain a variety of characteristics. China has many apple rootstock resources that [...] Read more.
Apple (Malus Mill.) is one of the most important fruits in China, and it boasts the world’s largest cultivation area and yield. It needs to be grafted onto rootstocks to maintain a variety of characteristics. China has many apple rootstock resources that exhibit high resistance and strong adaptability; for these reasons, they are highly suited to China’s complex and diverse natural environment. In China, apple rootstock breeding began in the 1970s, and now, several rootstocks, such as the ‘GM256’ and ‘SH’ series, are widely used. However, domestic rootstock resources and varieties are difficult to root. This affects the selection, utilization, and promotion of apple rootstocks. Cutting is an important method of rooting for apple rootstocks. This study discusses the main factors that affect rooting in rootstock cutting propagation; it also summarizes the rooting ability of different apple rootstocks and presents analyses of the demand for rootstocks in the major areas of apple production in China. We present the apple rootstock resources that are suitable for the soil and climate conditions of this production. We also call for research on the cutting roots of these specific apple rootstock resources to be expanded and strengthened. It is hoped that cutting rootstocks suitable for major areas of apple production may be more easily screened and bred successfully in China in the near future. Full article
(This article belongs to the Section Propagation and Seeds)
Show Figures

Figure 1

14 pages, 2476 KiB  
Article
Implications for Economic Sustainability of Food Systems from Reductions in Household Food Waste: The Case of the Australian Apple Industry
by Sarah Rohr, Stuart Mounter and Derek Baker
Sustainability 2024, 16(3), 1061; https://doi.org/10.3390/su16031061 - 26 Jan 2024
Viewed by 1915
Abstract
Households are among the greatest contributors to food waste generation, particularly in fresh fruit and vegetables. From a policy perspective, reductions in household food waste are generally perceived to generate positive outcomes; however, the economic impacts are transmitted throughout the food value chain. [...] Read more.
Households are among the greatest contributors to food waste generation, particularly in fresh fruit and vegetables. From a policy perspective, reductions in household food waste are generally perceived to generate positive outcomes; however, the economic impacts are transmitted throughout the food value chain. In this paper, an Equilibrium Displacement Model (EDM) of the Australian apple industry is used to demonstrate the potential changes in economic welfare among apple industry participants from a reduction in household demand for food waste. Overall, there is an industry loss of economic surplus with apple growers, wholesalers, processors, and retailers who are adversely impacted. Domestic consumers potentially gain from increased food security at lower prices; however, the direction and magnitude of the change in consumer welfare are ambiguous and dependent on the treatment of consumer surplus on food waste in economic surplus calculations. This ambiguity likely has implications for current policies to combat food waste. The distributional impacts of changes in economic welfare among industry stakeholders emphasise the need for a collaborative approach to the food waste problem. Full article
(This article belongs to the Section Economic and Business Aspects of Sustainability)
Show Figures

Figure 1

18 pages, 4603 KiB  
Article
Apple CRISPR-Cas9—A Recipe for Successful Targeting of AGAMOUS-like Genes in Domestic Apple
by Seth Jacobson, Natalie Bondarchuk, Thy Anh Nguyen, Allison Canada, Logan McCord, Timothy S. Artlip, Philipp Welser and Amy L. Klocko
Plants 2023, 12(21), 3693; https://doi.org/10.3390/plants12213693 - 26 Oct 2023
Cited by 7 | Viewed by 3079
Abstract
Fruit trees and other fruiting hardwood perennials are economically valuable, and there is interest in developing improved varieties. Both conventional breeding and biotechnology approaches are being utilized towards the goal of developing advanced cultivars. Increased knowledge of the effectiveness and efficiency of biotechnology [...] Read more.
Fruit trees and other fruiting hardwood perennials are economically valuable, and there is interest in developing improved varieties. Both conventional breeding and biotechnology approaches are being utilized towards the goal of developing advanced cultivars. Increased knowledge of the effectiveness and efficiency of biotechnology approaches can help guide use of the CRISPR gene-editing technology. Here, we examined CRISPR-Cas9-directed genome editing in the valuable commodity fruit tree Malus x domestica (domestic apple). We transformed two cultivars with dual CRISPR-Cas9 constructs designed to target two AGAMOUS-like genes simultaneously. The main goal was to determine the effectiveness of this approach for achieving target gene changes. We obtained 6 Cas9 control and 38 independent CRISPR-Cas9 events. Of the 38 CRISPR-Cas9 events, 34 (89%) had gene edits and 14 (37%) showed changes to all alleles of both target genes. The most common change was large deletions, which were present in 59% of all changed alleles, followed by small deletions (21%), small insertions (12%), and a combination of small insertions and deletions (8%). Overall, a high rate of successful gene alterations was found. Many of these changes are predicted to cause frameshifts and alterations to the predicted peptides. Future work will include monitoring the floral development and floral form. Full article
Show Figures

Graphical abstract

12 pages, 4672 KiB  
Communication
Wild Malus niedzwetzkyana Dieck ex Koehne as a Genetic Resource for Fire Blight Resistance
by Mariya Kolchenko, Aidana Nurtaza, Alexandr Pozharskiy, Damira Dyussembekova, Anastasiya Kapytina, Gulnaz Nizamdinova, Marina Khusnitdinova, Aisha Taskuzhina, Almagul Kakimzhanova and Dilyara Gritsenko
Horticulturae 2023, 9(10), 1066; https://doi.org/10.3390/horticulturae9101066 - 22 Sep 2023
Cited by 5 | Viewed by 1624
Abstract
Wild apples and their hybrids are valued as a source of genetic resistance to biotic and abiotic stress. Malus niedzwetzkyana is an endangered ornamental apple species endemic to Southeast Kazakhstan, the center of Malus domestication. To test the fire blight resistance of M. [...] Read more.
Wild apples and their hybrids are valued as a source of genetic resistance to biotic and abiotic stress. Malus niedzwetzkyana is an endangered ornamental apple species endemic to Southeast Kazakhstan, the center of Malus domestication. To test the fire blight resistance of M. niedzwetzkyana, eight plant genotypes were inoculated with a local strain of Erwinia amylovora. The genotypes possess different genetic backgrounds, which was confirmed via SSR profiling. Four out of eight displayed moderate to severe symptoms of fire blight infection, while the three wild genotypes proved resistant. To search for the source of the resistance, the samples were tested for the presence of FBF7 QTL using SCAR markers, where seven genotypes tested positive for one of the markers (AE10-375) and one for the other (GE80-19). No correlation between resistance phenotype and FBF7 QTL was confirmed, indicating the source lies elsewhere. Developing detailed genetic and phenotypic profiles of wild apple species helps advance both the preservation efforts and marker-assisted selection in apple breeding. Full article
Show Figures

Figure 1

16 pages, 20430 KiB  
Review
Chinee Apple (Ziziphus mauritiana): A Comprehensive Review of Its Weediness, Ecological Impacts and Management Approaches
by Ciara J. O’Brien, Shane Campbell, Anthony Young, Wayne Vogler and Victor J. Galea
Plants 2023, 12(18), 3213; https://doi.org/10.3390/plants12183213 - 8 Sep 2023
Cited by 5 | Viewed by 4716
Abstract
Ziziphus mauritiana Lam. (Rhamnaceae) (Chinee Apple, Indian Jujube, or Ber) is a significant woody weed in the drier tropics of northern Queensland, Western Australia, and the Northern Territory. Throughout these regions, its densely formed thickets influence the structure, function, and composition of rangeland [...] Read more.
Ziziphus mauritiana Lam. (Rhamnaceae) (Chinee Apple, Indian Jujube, or Ber) is a significant woody weed in the drier tropics of northern Queensland, Western Australia, and the Northern Territory. Throughout these regions, its densely formed thickets influence the structure, function, and composition of rangeland ecosystems by outcompeting native pasture species. Despite this, the recent literature is heavily focused on the horticultural value of domesticated Ziziphus species in South Asia (China, India, and Pakistan), particularly its potential for poverty alleviation in arid or semi-arid areas. In fact, there has been comparatively little research undertaken on its invasiveness or associated ecological factors in pastoral contexts. Currently, the management of Z. mauritiana is limited to the application of synthetic herbicides or mechanical clearing operations. There is also considerable interest in the exploitation of host-specific, natural enemies (biological control agents, herbivorous insects, fungi, bacteria, or viruses) for limiting the vigour, competitiveness, or reproductive capacity of Z. mauritiana in northern Australia. The development of a “bioherbicide” in lieu of synthetic counterparts may foster a more resilient coexistence between agricultural systems and the natural environment owing to its reduced environmental persistence and increased target specificity. This review summarises the current literature on the weediness, ecological impacts, and current management of this problematic weed, thereby identifying (i) opportunities for further research and (ii) recommendations for improved management within its invasive range. Full article
(This article belongs to the Section Plant Protection and Biotic Interactions)
Show Figures

Figure 1

22 pages, 5500 KiB  
Article
Identification of Apple Varieties Resistant to Fire Blight (Erwinia amylovora) Using Molecular Markers
by Gulshariya Kairova, Nurzhan Daulet, Maxim Solomadin, Nurlan Sandybayev, Shynggys Orkara, Vyacheslav Beloussov, Nazym Kerimbek, Dilyara Gritsenko and Zagipa Sapakhova
Horticulturae 2023, 9(9), 1000; https://doi.org/10.3390/horticulturae9091000 - 4 Sep 2023
Cited by 8 | Viewed by 2635
Abstract
Fire blight of fruit crops is one of the most dangerous diseases for apple trees and other plants of the Rosaceae family, and in Kazakhstan, it is subject to quarantine. To study the spread of fire blight, a phytopathological evaluation of 59 apple [...] Read more.
Fire blight of fruit crops is one of the most dangerous diseases for apple trees and other plants of the Rosaceae family, and in Kazakhstan, it is subject to quarantine. To study the spread of fire blight, a phytopathological evaluation of 59 apple varieties of domestic and foreign breeds was carried out in various regions of the south and southeast of Kazakhstan while also considering climatic conditions. The susceptibility of an apple tree to fire blight is influenced by the climatic conditions prevailing in a particular fruit region of Kazakhstan. Samples were collected from various varieties of apple trees with fire blight symptoms for molecular genetic analysis. The phytopathological evaluation and results of the PCR analysis made it possible to identify the causative agent of the disease and its spread to apple varieties in the main fruit regions of Kazakhstan. A molecular study of the resistance to the fire blight pathogen was carried out using the most effective molecular markers. A set of 10 (FBE-1_Y320; FBE-2_Y192; FBE-2_Y495; FBE-2_Y551; FB-MR5-K35; FB-MRS-R240; FB-MR5-R249; FB-MR5-rp16k15_M106; RLP1a; and RLP1b) SNPs was selected, including SNPs reported to be associated with three trait loci, as well as the two markers AE10-375 and GE-8019. Interestingly, the SNP analysis revealed that for all ten markers linked to fire blight resistance, the genotypes of all 59 apple cultivars were identical. No differences in the presence or absence of these markers were observed among the studied varieties. The 26 apple varieties of domestic and foreign breeds most resistant to fire blight were identified in the molecular analysis using the markers AE-375 and GE-8019. Among the studied 59 apple varieties, 23 varieties were identified using the AE-375 marker and 7 varieties with the GE-8019 marker. Samuret, Honeycrisp, Pinova, and Red Topaz were found to be resistant using markers AE-375 and GE-8019. The most promising apple varieties for further breeding for resistance to fire blight programs were selected. Full article
Show Figures

Figure 1

16 pages, 3314 KiB  
Article
In Silico Apple Genome-Encoded MicroRNA Target Binding Sites Targeting Apple Chlorotic Leaf Spot Virus
by Muhammad Aleem Ashraf, Nimra Murtaza, Judith K. Brown and Naitong Yu
Horticulturae 2023, 9(7), 808; https://doi.org/10.3390/horticulturae9070808 - 14 Jul 2023
Cited by 3 | Viewed by 2217
Abstract
Apple chlorotic leaf spot virus (ACLSV) (genus, Trichovirus; family, Betaflexiviridae) is a widespread, deleterious, and the most damaging pathogen of pome and fruit trees including domesticated apple (Malus × domestica Borkh.), to which it is transmitted by grafting and pruning. [...] Read more.
Apple chlorotic leaf spot virus (ACLSV) (genus, Trichovirus; family, Betaflexiviridae) is a widespread, deleterious, and the most damaging pathogen of pome and fruit trees including domesticated apple (Malus × domestica Borkh.), to which it is transmitted by grafting and pruning. The positive-sense, single-stranded RNA virus is 600–700 nm long and has a genome of 74.7–7.56 kbp in size, minus the poly-A tail and 3′- and 5′-untranslated regions. The genome has three overlapping open reading frames (ORFs) that encode a replication-associated protein (Rep), movement protein (MP), and coat protein (CP). RNA interference (RNAi)-mediated antiviral defense in eukaryotes has evolved to control infections in plant viruses. The objective of this study was to analyze locus-derived microRNAs (mdm-miRNAs) in the apple genome with potential for targeting ACLSV +ssRNA-encoded mRNAs, using a predictive approach that involves four algorithms. The goal is to mobilize the in silico-predicted endogenous mdm-miRNAs and trigger the RNAi pathway experimentally in apple trees to evaluate antiviral resistance to ACLSV. Experimentally validated apple (2n = 2X = 34) mdm-miRNAs (n = 322) were obtained from the miRBase database and aligned to the ACLSV genome (KU870525). Of the 322 targeting mature locus-derived mdm-miRNAs analyzed, nine apple mdm-miRNA homologs (mdm-miR395k, mdm-miR5225c, and mdm-miR7121 (a, b, c, d, e, f, g, h) were predicted by all “four algorithms”, whereas fifty-eight mdm-miRNAs were identified as consensus binding sites by the combined results of two algorithms. The miRanda, RNA22, and TAPIR algorithms predicted binding of mdm-miR395k at nucleotide position 4691 and identified it as the most effective interacting mdm-miRNA targeting the virus ORF1 sequence. An integrated Circos plot was generated to validate the accuracy of target prediction and determine if apple mdm-miRNAs could bind to the predicted ACLSV mRNA target(s). A genome-wide in silico-predicted miRNA-mediated target gene regulatory network was implicated to validate interactions necessary to warrant in vivo analysis. The availability of validated locus-derived microRNAs (mdm-miRNAs) with predicted potential to target ACLSV in infected apple trees represents the first step toward development of ACLSV-resistant apple trees. Full article
Show Figures

Figure 1

19 pages, 1170 KiB  
Article
Phenolic Compounds as Phytochemical Tracers of Varietal Origin of Some Autochthonous Apple Cultivars Grown in Serbia
by Nikola Horvacki, Filip Andrić, Uroš Gašić, Dejan Đurović, Živoslav Tešić, Milica Fotirić Akšić and Dušanka Milojković-Opsenica
Molecules 2022, 27(21), 7651; https://doi.org/10.3390/molecules27217651 - 7 Nov 2022
Cited by 9 | Viewed by 2388
Abstract
Domesticated international (standard) apple cultivars, together with resistant apple cultivars are the core of the Serbian apple production. Furthermore, autochthonous cultivars are characterized by a good adaptability to the local environmental conditions and represent a valuable source of genetic variability, as well as [...] Read more.
Domesticated international (standard) apple cultivars, together with resistant apple cultivars are the core of the Serbian apple production. Furthermore, autochthonous cultivars are characterized by a good adaptability to the local environmental conditions and represent a valuable source of genetic variability, as well as an important source of the gene pool for further breeding programs. Additionally, they show a higher phenolic content and a stronger antioxidant activity, in comparison to commercial cultivars. Therefore, they are more likely to be used as a functional food. The subjects of this study were seventeen samples of fruits and leaves from autochthonous apple cultivars, five international standard cultivars, and six resistant apple cultivars. The phenolic profile was determined using ultra-high performance liquid chromatography (UHPLC), coupled with a diode array detector and a TSQ Quantum Access Max triple-quadrupole mass spectrometer. A total of twenty compounds were quantified in the samples. Most of the analyzed phenolics were detected in higher amounts in the peel, compared to the mesocarp. The results of the multivariate analysis of variance (MANOVA) indicate that 5-O-caffeoylquinic acid is present in the highest amount in the mesocarp, while in the peel and leaves, quercetin-glycosides were detected in the highest amount. According to the MANOVA: phloretin, phlorizin, 5-O-caffeoylquinic acid, kaempferol, and p-coumaric acid are present in significantly higher levels in the autochthonous cultivars, compared to the standard and resistant ones (in both fruits and leaves). Therefore, these compounds can be used as chemical tracers of the apple varietal origin. Full article
Show Figures

Figure 1

19 pages, 1205 KiB  
Review
Root Breeding in the Post-Genomics Era: From Concept to Practice in Apple
by Zhou Zhou, Lei Zhang, Jing Shu, Mengyu Wang, Han Li, Huairui Shu, Xiaoyun Wang, Qinghua Sun and Shizhong Zhang
Plants 2022, 11(11), 1408; https://doi.org/10.3390/plants11111408 - 26 May 2022
Cited by 7 | Viewed by 2794
Abstract
The development of rootstocks with a high-quality dwarf-type root system is a popular research topic in the apple industry. However, the precise breeding of rootstocks is still challenging, mainly because the root system is buried deep underground, roots have a complex life cycle, [...] Read more.
The development of rootstocks with a high-quality dwarf-type root system is a popular research topic in the apple industry. However, the precise breeding of rootstocks is still challenging, mainly because the root system is buried deep underground, roots have a complex life cycle, and research on root architecture has progressed slowly. This paper describes ideas for the precise breeding and domestication of wild apple resources and the application of key genes. The primary goal of this research is to combine the existing rootstock resources with molecular breeding and summarize the methods of precision breeding. Here, we reviewed the existing rootstock germplasm, high-quality genome, and genetic resources available to explain how wild resources might be used in modern breeding. In particular, we proposed the ‘from genotype to phenotype’ theory and summarized the difficulties in future breeding processes. Lastly, the genetics governing root diversity and associated regulatory mechanisms were elaborated on to optimize the precise breeding of rootstocks. Full article
(This article belongs to the Topic Advanced Breeding Technology for Plants)
Show Figures

Figure 1

Back to TopTop