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Search Results (912)

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17 pages, 3344 KiB  
Article
Connectiveness of Antimicrobial Resistance Genotype–Genotype and Genotype–Phenotype in the “Intersection” of Skin and Gut Microbes
by Ruizhao Jia, Wenya Su, Wenjia Wang, Lulu Shi, Xinrou Zheng, Youming Zhang, Hai Xu, Xueyun Geng, Ling Li, Mingyu Wang and Xiang Li
Biology 2025, 14(8), 1000; https://doi.org/10.3390/biology14081000 - 5 Aug 2025
Abstract
The perianal skin is a unique “skin–gut” boundary that serves as a critical hotspot for the exchange and evolution of antibiotic resistance genes (ARGs). However, its role in the dissemination of antimicrobial resistance (AMR) has often been underestimated. To characterize the resistance patterns [...] Read more.
The perianal skin is a unique “skin–gut” boundary that serves as a critical hotspot for the exchange and evolution of antibiotic resistance genes (ARGs). However, its role in the dissemination of antimicrobial resistance (AMR) has often been underestimated. To characterize the resistance patterns in the perianal skin environment of patients with perianal diseases and to investigate the drivers of AMR in this niche, a total of 51 bacterial isolates were selected from a historical strain bank containing isolates originally collected from patients with perianal diseases. All the isolates originated from the skin site and were subjected to antimicrobial susceptibility testing, whole-genome sequencing, and co-occurrence network analysis. The analysis revealed a highly structured resistance pattern, dominated by two distinct modules: one representing a classic Staphylococcal resistance platform centered around mecA and the bla operon, and a broad-spectrum multidrug resistance module in Gram-negative bacteria centered around tet(A) and predominantly carried by IncFIB and other IncF family plasmids. Further analysis pinpointed IncFIB-type plasmids as potent vehicles driving the efficient dissemination of the latter resistance module. Moreover, numerous unexplained resistance phenotypes were observed in a subset of isolates, indicating the potential presence of emerging and uncharacterized AMR threats. These findings establish the perianal skin as a complex reservoir of multidrug resistance genes and a hub for mobile genetic element exchange, highlighting the necessity of enhanced surveillance and targeted interventions in this clinically important ecological niche. Full article
(This article belongs to the Section Microbiology)
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16 pages, 1739 KiB  
Article
Impact of the Thermovinification Practice Combined with the Use of Autochthonous Yeasts on the Fermentation Kinetics of Red Wines
by Islaine Santos Silva, Ana Paula André Barros, Marcos dos Santos Lima, Bruna Carla Agustini, Carolina Oliveira de Souza and Aline Camarão Telles Biasoto
Fermentation 2025, 11(8), 436; https://doi.org/10.3390/fermentation11080436 - 29 Jul 2025
Viewed by 295
Abstract
Thermovinification has emerged as a rising alternative method in red wine production, gaining popularity among winemakers. The use of autochthonous yeasts isolated from grapes is also an interesting practice that contributes to the creation of wine with a distinctive regional character. This research [...] Read more.
Thermovinification has emerged as a rising alternative method in red wine production, gaining popularity among winemakers. The use of autochthonous yeasts isolated from grapes is also an interesting practice that contributes to the creation of wine with a distinctive regional character. This research investigated how combining thermovinification with autochthonous yeast strains influences the fermentation dynamics of Syrah wine. Six treatments were conducted, combining the use of commercial and two autochthonous yeasts with traditional vinification (7-day maceration) and thermovinification (65 °C for 2 h) processes. Sugars and alcohols were quantified during alcoholic fermentation by high-performance liquid chromatography with refractive index detection. Cell viability and kinetic parameters, such as ethanol formation rate and sugar consumption, were also evaluated. The Syrah wine’s composition was characterized by classical wine analyses (OIV procedures). The results showed that cell viability was unaffected by thermovinification. Thermovinification associated with autochthonous yeasts improved the efficiency of alcoholic fermentation. Thermovinified wines also yielded a higher alcohol content (13.9%). Future studies should investigate how thermovinification associated with autochthonous yeasts affects the metabolomic and flavoromic properties of Syrah wine and product acceptability. Full article
(This article belongs to the Section Fermentation for Food and Beverages)
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12 pages, 1307 KiB  
Article
Protection Against Transplacental Transmission of a Highly Virulent Classical Swine Fever Virus Two Weeks After Single-Dose FlagT4G Vaccination in Pregnant Sows
by Liani Coronado, Àlex Cobos, Adriana Muñoz-Aguilera, Sara Puente-Marin, Gemma Guevara, Cristina Riquelme, Saray Heredia, Manuel V. Borca and Llilianne Ganges
Vaccines 2025, 13(8), 803; https://doi.org/10.3390/vaccines13080803 - 28 Jul 2025
Viewed by 368
Abstract
Background/Objectives: Classical swine fever (CSF) continues to challenge global eradication efforts, particularly in endemic regions, where pregnant sows face heightened risks of vertical transmission following exposure to CSFV. Methods: This study evaluates the early protective efficacy of FlagT4G, a novel live attenuated DIVA-compatible [...] Read more.
Background/Objectives: Classical swine fever (CSF) continues to challenge global eradication efforts, particularly in endemic regions, where pregnant sows face heightened risks of vertical transmission following exposure to CSFV. Methods: This study evaluates the early protective efficacy of FlagT4G, a novel live attenuated DIVA-compatible vaccine. Pregnant sows were vaccinated at mid-gestation and challenged 14 days later with a highly virulent CSFV strain. Results: FlagT4G conferred complete clinical protection, preventing both maternal viremia and transplacental transmission. No CSFV RNA, specific antibodies, or IFN-α were detected in fetal samples from vaccinated animals. In contrast, unvaccinated sows exhibited clinical signs, high viral loads, and widespread fetal infection. Interestingly, early protection was observed even in the absence of strong humoral responses in some vaccinated sows, suggesting a potential role for innate or T-cell-mediated immunity in conferring rapid protection. Conclusions: The demonstrated efficacy of FlagT4G within two weeks of vaccination underscores its feasibility for integration into emergency vaccination programs. Its DIVA compatibility and ability to induce early fetal protection against highly virulent CSFV strains position it as a promising tool for CSF control and eradication strategies. Full article
(This article belongs to the Special Issue Vaccines for Porcine Viruses)
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18 pages, 849 KiB  
Article
Antimicrobial Activity of Greek Native Essential Oils Against Escherichia coli O157:H7 and Antibiotic Resistance Strains Harboring pNorm Plasmid, mecA, mcr-1 and blaOXA Genes
by Rafail Fokas, Zoi Anastopoulou and Apostolos Vantarakis
Antibiotics 2025, 14(8), 741; https://doi.org/10.3390/antibiotics14080741 - 24 Jul 2025
Viewed by 908
Abstract
Background/Objectives: The rapid emergence of antibiotic-resistant Escherichia coli in food and clinical environments necessitates new, clean-label antimicrobials. This study assessed eight Greek native essential oils—oregano, thyme, dittany, rosemary, peppermint, lavender, cistus and helichrysum—for activity against six genetically and phenotypically diverse E. coli strains [...] Read more.
Background/Objectives: The rapid emergence of antibiotic-resistant Escherichia coli in food and clinical environments necessitates new, clean-label antimicrobials. This study assessed eight Greek native essential oils—oregano, thyme, dittany, rosemary, peppermint, lavender, cistus and helichrysum—for activity against six genetically and phenotypically diverse E. coli strains (reference, pNorm, mecA, mcr-1, blaOXA and O157:H7). We aimed to identify oils with broad-spectrum efficacy and clarify the chemical constituents responsible. Methods: Disk-diffusion assays measured inhibition zones at dilutions from 50% to 1.56% (v/v). MIC and MBC values were determined by broth microdilution. GC–MS profiling identified dominant components, and Spearman rank-order correlations (ρ) linked composition to activity. Shapiro–Wilk tests (W = 0.706–0.913, p ≤ 0.002) indicated non-normal data, so strain comparisons used Kruskal–Wallis one-way ANOVA with Dunn’s post hoc and Bonferroni correction. Results: Oregano, thyme and dittany oils—rich in carvacrol and thymol—exhibited the strongest activity, with MIC/MBC ≤ 0.0625% (v/v) against all strains and inhibition zones > 25 mm at 50%. No strain-specific differences were detected (H = 0.30–3.85; p = 0.998–0.571; padj = 1.000). Spearman correlations confirmed that carvacrol and thymol content strongly predicted efficacy (ρ = 0.527–0.881, p < 0.001). Oils dominated by non-phenolic terpenes (rosemary, peppermint, lavender, cistus, helichrysum) showed minimal or no activity. Conclusions: Phenolic-rich EOs maintain potent, strain-independent antimicrobial effects—including against multidrug-resistant and O157:H7 strains—via a multi-target mode that overcomes classical resistance. Their low-dose efficacy and GRAS status support their use as clean-label food preservatives or adjuncts to antibiotics or bacteriophages to combat antimicrobial resistance. Full article
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14 pages, 1288 KiB  
Article
Reference Limits for Fetal Biventricular Longitudinal Strain Using Speckle Tracking Echocardiography Across Gestational Age Groups: A Single-Center Study
by Andreea Cerghit-Paler, Amalia Fagarasan, Dorottya Gabor-Miklosi, Claudiu Mărginean, Mihaela Iancu and Liliana Gozar
J. Clin. Med. 2025, 14(15), 5226; https://doi.org/10.3390/jcm14155226 - 24 Jul 2025
Viewed by 275
Abstract
Background/Objectives: The development of normal fetal cardiac function, a dynamic process that has not yet been precisely documented throughout the literature, is difficult to quantify by classic echocardiography. Our aim was to analyze the function of the fetal myocardium through speckle tracking and [...] Read more.
Background/Objectives: The development of normal fetal cardiac function, a dynamic process that has not yet been precisely documented throughout the literature, is difficult to quantify by classic echocardiography. Our aim was to analyze the function of the fetal myocardium through speckle tracking and establish reference values for global and segmental longitudinal strain for both ventricles in fetuses with a gestational age (GA) between 22 and 39 weeks. Methods: We conducted a prospective study in which 170 fetuses underwent echocardiographic evaluation and those 150 that were eligible for the study underwent offline speckle tracking analysis. Results: A mixed-design ANOVA model with Greenhouse–Geisser correction showed no significant differences in regional strain measurements among GA groups (F [2, 147] = 1.25, p = 0.289) but showed significant differences in regional strain measurements among the right ventricle (RV), left ventricle (LV), and interventricular free wall (Greenhouse–Geisser F [1.3, 195.2] = 45.70, p < 0.001, GG ε = 0.66, original df = 2, 294). The wall-by-segment interaction term of the model was statistically significant for regional strain (Greenhouse–Geisser F [2.7, 394.2] = 27.00, p < 0.001, GG ε = 0.67, original df = 4, 588), while the segment-by-gestational age group term had a tendency toward statistical significance (Greenhouse–Geisser F [3.0, 221.4] = 2.21, p = 0.088, GG ε = 0.75, original df = 4, 294). The results of Welch’s ANOVA model showed no significant difference in right-ventricle peak global longitudinal strain (pGLS) between GA groups (F [2.0, 92.2] = 0.52, p = 0.5972) and global longitudinal strain measurements (F [2.0, 89.6] = 27.00, p = 0.3733). Conclusions: The reference values for longitudinal strain, represented by the pGLS for LV, ranged from −20.79 to −8.05 for fetuses with a GA between 22 and 27 weeks, from −20.14 to −8.99 for fetuses with a GA between 28 and 33 weeks, and from −20.19 to −8.88 for fetuses with a GA between 34 and 39 weeks. For RV pGLS, the reference values were between −18.99 and −6.35, also depending on GA. Reference ranges for the large gestational groups studied can help us to recognize subtle changes in fetal cardiac function. Full article
(This article belongs to the Section Cardiovascular Medicine)
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17 pages, 3345 KiB  
Article
Novel Tetraphenolic Porphyrazine Capable of MRSA Photoeradication
by Wojciech Szczolko, Eunice Zuchowska, Tomasz Koczorowski, Michal Kryjewski, Jolanta Dlugaszewska and Dariusz T. Mlynarczyk
Molecules 2025, 30(15), 3069; https://doi.org/10.3390/molecules30153069 - 22 Jul 2025
Viewed by 238
Abstract
This work presents the synthesis, characterization and evaluation of physicochemical and biological properties of two new aminoporphyrazine derivatives bearing magnesium(II) cations in their cores and peripheral pyrrolyl groups. The synthesis was carried out in several stages, using classical methods and the Microwave-Assisted Organic [...] Read more.
This work presents the synthesis, characterization and evaluation of physicochemical and biological properties of two new aminoporphyrazine derivatives bearing magnesium(II) cations in their cores and peripheral pyrrolyl groups. The synthesis was carried out in several stages, using classical methods and the Microwave-Assisted Organic Synthesis (MAOS) approach. The obtained compounds were characterized using spectral techniques: UV-Vis spectrophotometry, mass spectrometry, 1H and 13C NMR spectroscopy. The porphyrazine derivatives were tested for their electrochemical properties (CV and DPV), which revealed four redox processes, of which in compound 7 positive shifts of oxidation potentials were observed, resulting from the presence of free phenolic hydroxyl groups. In spectroelectrochemical measurements, changes in UV-Vis spectra associated with the formation of positive-charged states were noted. Photophysical studies revealed the presence of characteristic absorption Q and Soret bands, low fluorescence quantum yields and small Stokes shifts. The efficiency of singlet oxygen generation (ΦΔ) was higher for compound 6 (up to 0.06), but compound 7, despite its lower efficiency (0.02), was distinguished by a better biological activity profile. Toxicity tests using the Aliivibrio fischeri bacteria indicated the lower toxicity of 7 compared to 6. The most promising result was the strong photodynamic activity of porphyrazine 7 against the Methicillin-resistant Stapylococcus aureus (MRSA) strain, leading to a more-than-5.6-log decrease in viable counts after the colony forming units (CFU) after light irradiation. Compound 6 did not show any significant antibacterial activity. The obtained data indicate that porphyrazine 7 is a promising candidate for applications in photodynamic therapy of bacterial infections. Full article
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15 pages, 2083 KiB  
Article
Identifying Key Pathogens and Effective Control Agents for Astragalus membranaceus var. mongholicus Root Rot
by Bo Zhang, Bingyan Xia, Chunyan Wang, Ouli Xiao, Tielin Wang, Haoran Zhao, Xiaofeng Dai, Jieyin Chen, Yonggang Wang and Zhiqiang Kong
J. Fungi 2025, 11(7), 544; https://doi.org/10.3390/jof11070544 - 21 Jul 2025
Viewed by 416
Abstract
Root rot is one of the most serious diseases affecting Astragalus membranaceus, significantly reducing its yield and quality. This study focused on root rot in Astragalus membranaceus var. mongholicus. Pathogenic fungi were isolated and identified. The pathogenicity of seven strains of [...] Read more.
Root rot is one of the most serious diseases affecting Astragalus membranaceus, significantly reducing its yield and quality. This study focused on root rot in Astragalus membranaceus var. mongholicus. Pathogenic fungi were isolated and identified. The pathogenicity of seven strains of pathogenic fungi was verified according to Koch’s postulates. The inhibitory effects of eight classic fungicides and nine strains of biocontrol agents on the pathogenic fungi were determined using the mycelial growth rate method. Through morphological and ITS phylogenetic analyses, strains CDF5, CDF6, and CDF7 were identified as Fusarium oxysporum, while strains CDF1, CDF2, CDF3, and CDF4 were identified as Fusarium solani. Indoor virulence tests showed that, among the eight tested fungicides, carbendazim exhibited the strongest inhibitory effect on the mycelial growth of both F. oxysporum and F. solani, with a half-maximal effective concentration (EC50) value of (0.44 ± 0.24) mg/mL, making it a highly promising chemical agent for the control of A. membranaceus var. mongholicus root rot. Among the nine biocontrol agents, KRS006 showed the best inhibitory effect against the seven pathogenic strains, with an inhibition rate ranging from 42.57% to 55.51%, and it can be considered a candidate strain for biological control. This study identified the biocontrol strain KRS006 and the chemical fungicide carbendazim as promising core agents for the biological and chemical control of A. membranaceus var. mongholicus root rot, respectively, providing a theoretical foundation for establishing a dual biocontrol–chemical control strategy. Based on the excellent performance of the biocontrol bacteria and fungicides in the pathogen control tests, future research should focus on field trials to verify the synergistic effect of this integrated control strategy and clarify the interaction mechanism between the antibacterial metabolites produced by the biocontrol bacteria KRS006 and carbendazim. Additionally, continuous monitoring of the evolution of Fusarium spp. resistance to carbendazim is critical to ensure the long-term sustainability of the integrated control system. Full article
(This article belongs to the Special Issue Biological Control of Fungal Plant Pathogens)
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24 pages, 7960 KiB  
Article
Creep Behavior and Deformation Mechanism of Aluminum Alloy: Integrating Multiscale Simulation and Experiments
by Weizheng Lu, Jianguo Wu, Jiajun Liu, Xiaoai Yi, Qiyue Zhang, Yang Chen, Jia Li and Qihong Fang
Symmetry 2025, 17(7), 1146; https://doi.org/10.3390/sym17071146 - 17 Jul 2025
Viewed by 234
Abstract
Aluminum (Al) alloys exhibit exceptional mechanical properties, seeing widespread use in various industrial fields. Here, we use a multiscale simulation method combining phase field method, dislocation dynamics, and crystal plasticity finite element method to reveal the evolution law of precipitates, the interaction mechanism [...] Read more.
Aluminum (Al) alloys exhibit exceptional mechanical properties, seeing widespread use in various industrial fields. Here, we use a multiscale simulation method combining phase field method, dislocation dynamics, and crystal plasticity finite element method to reveal the evolution law of precipitates, the interaction mechanism between dislocations and precipitates, and the grain-level creep deformation mechanism in 7A09 Al alloy under creep loading. The phase field method indicates that Al alloys tend to form fewer but larger precipitates during the creep process, under the dominant effect of stress-assisted Ostwald ripening. The dynamic equilibrium process of precipitate is not only controlled by classical diffusion mechanisms, but also closely related to the local strain field induced by dislocations and the elastic interaction between precipitates. Dislocation dynamics simulations indicate that the appearance of multiple dislocation loops around the precipitate during the creep process is the main dislocation creep deformation mechanism. A crystal plasticity finite element model is established based on experimental characterization to investigate the macroscopic creep mechanism. The dislocation climb is hindered by grain boundaries during creep, and high-density dislocation bands are formed around specific grains, promoting non-uniform plastic strain and leading to strong strain gradients. This work provides fundamental insights into understanding creep behavior and deformation mechanism of Al alloy for deep-sea environments. Full article
(This article belongs to the Section Engineering and Materials)
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11 pages, 2361 KiB  
Brief Report
Reexamining a Host-Associated Genomic Diversity of Bean Golden Mosaic Virus (BGMV) Isolates from Phaseolus Species and Other Fabaceae Hosts
by Luciane de Nazaré Almeida dos Reis, Josiane Goulart Batista, Maria Luiza Fernandes de Oliveira, Maria Esther de Noronha Fonseca, Josias Corrêa de Faria, Francisco José Lima Aragão, Leonardo Silva Boiteux and Rita de Cássia Pereira-Carvalho
Pathogens 2025, 14(7), 697; https://doi.org/10.3390/pathogens14070697 - 15 Jul 2025
Viewed by 316
Abstract
Beans (Phaseolus vulgaris and P. lunatus) are the major hosts of bean golden mosaic begomovirus (BGMV). Robust taxonomic criteria were established for Begomovirus species demarcation. However, DNA–A identities among BGMV isolates display a continuous variation (89–100%), which conflicts with the current concept [...] Read more.
Beans (Phaseolus vulgaris and P. lunatus) are the major hosts of bean golden mosaic begomovirus (BGMV). Robust taxonomic criteria were established for Begomovirus species demarcation. However, DNA–A identities among BGMV isolates display a continuous variation (89–100%), which conflicts with the current concept of a single viral species. The diversity of 146 Brazilian isolates designated in the GenBank as BGMV was assessed by comparing their complete DNA–A sequences. The isolates were clustered into four groups, being discriminated mainly by their original Fabaceae hosts. Additional Sequence Demarcation Tool analyses indicated that BGMV-related viruses comprise two clear-cut groups: isolates reported infecting mainly P. vulgaris (identities of 96–97% to the reference NC_004042 isolate) and a group associated with P. lunatus (identities of 89–91%). Moreover, we recognized a distinct set of genomic features in the iterons and Rep-associated protein motifs across these two diversity groups. The host prevalence and genomic differences suggest that most P. lunatus isolates are currently misclassified as BGMV strains, being more likely samples of a closely related (but distinct) Begomovirus species. Hence, the implications of this BGMV diversity should be taken into consideration by classical and biotech breeding programs aiming for large-spectrum viral resistance in Phaseolus species. Full article
(This article belongs to the Section Viral Pathogens)
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15 pages, 809 KiB  
Article
Fermentation of Microalgae as a Platform for Naturally Encapsulated Oil Powders: Characterization of a High-Oleic Algal Powder Ingredient
by Walter Rakitsky, Leon Parker, Kevin Ward, Thomas Pilarski, James Price, Mona Correa, Roberta Miller, Veronica Benites, Dino Athanasiadis, Bryce Doherty, Lucy Edy, Jon Wittenberg, Gener Eliares, Daniel Gates, Manuel Oliveira, Frédéric Destaillats and Scott Franklin
Microorganisms 2025, 13(7), 1659; https://doi.org/10.3390/microorganisms13071659 - 14 Jul 2025
Viewed by 356
Abstract
Powdered oil ingredients are widely used across food, nutrition, and personal care industries, but they are typically produced through encapsulation technologies that involve multiple additives and stabilizers. These systems can compromise oxidative stability, clean-label compliance, and functional performance. Here, we present the development [...] Read more.
Powdered oil ingredients are widely used across food, nutrition, and personal care industries, but they are typically produced through encapsulation technologies that involve multiple additives and stabilizers. These systems can compromise oxidative stability, clean-label compliance, and functional performance. Here, we present the development and characterization of a novel high-oleic algal powder (HOAP) produced from a heterotrophically fermented microalgae. The production strain was developed through classical mutagenesis to enhance oleic acid and lipid accumulation. Three independent fermentation batches at a 20 L scale demonstrated strong reproducibility in key metrics, including dried-cell weight (210.0 g per L on average, CV% = 0.7), oil content (62.0% of DCW on average, CV% = 2.0), and oleic acid (88.8% of total fatty acids on average, CV% = 0.1). HOAP exhibited a favorable nutritional profile (e.g., high monounsaturated fat and fiber, low sugar and moisture) and good oxidative stability under ambient and accelerated storage conditions. Microbiological analyses confirmed compliance with food-grade standards, and in silico allergenicity screening revealed no clinically relevant homologs. Unlike traditional oil powders, HOAP does not require encapsulation and retains oil within a natural protein–fiber matrix, offering both functional and clean-labeling advantages. Its compositional attributes and stability profile support potential use in food, nutrition, and the delivery of bioactive nutrients. These findings establish HOAP as a next generation of oil powder ingredients with broad application potential. Full article
(This article belongs to the Special Issue Microalgal Biotechnology: Innovations and Applications)
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19 pages, 3395 KiB  
Article
Hybrid Whole Genomes of Brucella melitensis from Tunisian Animal Isolates: Virulence Factors, Antimicrobial Susceptibility, and Phylogeny
by Ibtihel Ben Abdallah, Germán Kopprio, Awatef Béjaoui, Susanne Köhler, Kaouther Guesmi, Sana Kalthoum, Jacob Gatz, Amel Arfaoui, Monia Lachtar, Haikel Hajlaoui, Mohamed Naceur Baccar, Holger Scholz and Abderrazak Maaroufi
Microorganisms 2025, 13(7), 1651; https://doi.org/10.3390/microorganisms13071651 - 12 Jul 2025
Viewed by 410
Abstract
Brucellosis remains endemic in Tunisia, causing abortions in small ruminants, and represents a public health threat through occupational exposure and the consumption of contaminated animal products. The aims of this study are to assess the antibiotic susceptibility of two Brucella melitensis isolates (TATA [...] Read more.
Brucellosis remains endemic in Tunisia, causing abortions in small ruminants, and represents a public health threat through occupational exposure and the consumption of contaminated animal products. The aims of this study are to assess the antibiotic susceptibility of two Brucella melitensis isolates (TATA and SBZ) from aborted sheep, to analyze their genomes using hybrid whole-genome sequencing, and to investigate their antimicrobial resistance (AMR), potential virulence factors (VFs), and phylogenetic relationships. Both isolates were phenotypically confirmed to be susceptible to doxycycline, gentamicin, rifampicin, streptomycin, and trimethoprim–sulfamethoxazole, and no corresponding classical AMR genes were identified. However, several potential AMR-related genes (mprF, bepCDEFG, qacG, and adeF) and a mutation in the parC gene were detected. The analysis of the genotypes revealed 74 potential virulence genes, primarily involved in lipopolysaccharide synthesis and type IV secretion systems. Genomic comparison showed over 99% nucleotide identity between the Tunisian strains, B. melitensis bv. 1 16M and B. melitensis bv. 3 Ether. Five gene clusters, including three hypothetical proteins with 100% identity, were detected exclusively in the TATA and SBZ strains. Additionally, two unique gene clusters were identified in SBZ: a rhodocoxin reductase and another hypothetical protein. Both isolates were assigned to sequence types ST11 and ST89. Core-genome-based phylogenetic analysis clustered both strains with biovar 3 and ordered the Tunisian strains into two distinct groups: TATA within Tunisian Cluster 1 is closely related to strains from Egypt and Italy, while SBZ near MST Cluster 4 is more related to isolates from Austria and two outliers from Italy and Tunisia. This study provides the first genomic characterization of B. melitensis from aborted sheep in Tunisia and offers valuable insights into AMR, virulence, and phylogenetic distribution. Full article
(This article belongs to the Special Issue Epidemiology and Control Strategies for Brucellosis)
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30 pages, 435 KiB  
Review
Vaccination as a Game: Behavioural Dynamics, Network Effects, and Policy Levers—A Comprehensive Review
by Pedro H. T. Schimit, Abimael R. Sergio and Marco A. R. Fontoura
Mathematics 2025, 13(14), 2242; https://doi.org/10.3390/math13142242 - 10 Jul 2025
Viewed by 438
Abstract
Classical epidemic models treat vaccine uptake as an exogenous parameter, yet real-world coverage emerges from strategic choices made by individuals facing uncertain risks. During the last two decades, vaccination games, which combine epidemic dynamics with game theory, behavioural economics, and network science, have [...] Read more.
Classical epidemic models treat vaccine uptake as an exogenous parameter, yet real-world coverage emerges from strategic choices made by individuals facing uncertain risks. During the last two decades, vaccination games, which combine epidemic dynamics with game theory, behavioural economics, and network science, have become a very important tool for analysing this problem. Here, we synthesise more than 80 theoretical, computational, and empirical studies to clarify how population structure, psychological perception, pathogen complexity, and policy incentives interact to determine vaccination equilibria and epidemic outcomes. Papers are organised along five methodological axes: (i) population topology (well-mixed, static and evolving networks, multilayer systems); (ii) decision heuristics (risk assessment, imitation, prospect theory, memory); (iii) additional processes (information diffusion, non-pharmacological interventions, treatment, quarantine); (iv) policy levers (subsidies, penalties, mandates, communication); and (v) pathogen complexity (multi-strain, zoonotic reservoirs). Common findings across these studies are that voluntary vaccination is almost always sub-optimal; feedback between incidence and behaviour can generate oscillatory outbreaks; local network correlations amplify free-riding but enable cost-effective targeted mandates; psychological distortions such as probability weighting and omission bias materially shift equilibria; and mixed interventions (e.g., quarantine + vaccination) create dual dilemmas that may offset one another. Moreover, empirical work surveys, laboratory games, and field data confirm peer influence and prosocial motives, yet comprehensive model validation remains rare. Bridging the gap between stylised theory and operational policy will require data-driven calibration, scalable multilayer solvers, and explicit modelling of economic and psychological heterogeneity. This review offers a structured roadmap for future research on adaptive vaccination strategies in an increasingly connected and information-rich world. Full article
(This article belongs to the Special Issue Mathematical Epidemiology and Evolutionary Games)
20 pages, 13675 KiB  
Article
Research on the Use of Hydro-Pneumatic Shock Absorbers for the Rear Suspension of a Vehicle Cabin
by Vasile Gheorghe, Eliza Chircan and Horatiu Teodorescu Draghicescu
Appl. Sci. 2025, 15(14), 7759; https://doi.org/10.3390/app15147759 - 10 Jul 2025
Viewed by 265
Abstract
This work explores enhancing rear cabin suspension in vehicles using hydro-pneumatic shock absorbers to maintain the cabin position regardless of load and improve safety by mitigating oscillation impacts. Advanced solutions employ pneumatic elastic elements with automatic adjustment, addressing classic suspension disadvantages like variable [...] Read more.
This work explores enhancing rear cabin suspension in vehicles using hydro-pneumatic shock absorbers to maintain the cabin position regardless of load and improve safety by mitigating oscillation impacts. Advanced solutions employ pneumatic elastic elements with automatic adjustment, addressing classic suspension disadvantages like variable cab position and natural frequency with load changes. The experimental analysis of reinforced rubber samples from the air socket material involved tensile testing and scanning electron microscopy. The tensile results showed a clear trend: weak reinforced samples (L, T) were ductile but had a lower strength, while the ones on the reinforcing direction (D_45, D_60) exhibited a significantly increased strength and stiffness, with D_60 being the strongest but least ductile. Stress–strain curves visually confirmed these mechanical behaviors. Crucially, SEM images of fracture surfaces consistently revealed widespread fiber pull out. This indicates that weak interfacial adhesion between the reinforcing fibers and the rubber matrix is a primary limiting factor for the composite′s overall strength. Full article
(This article belongs to the Section Mechanical Engineering)
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24 pages, 1680 KiB  
Article
Mathematical Modeling of Salmonella Cancer Therapies Demonstrates the Necessity of Both Bacterial Cytotoxicity and Immune Activation
by Lars M. Howell and Neil S. Forbes
Bioengineering 2025, 12(7), 751; https://doi.org/10.3390/bioengineering12070751 - 10 Jul 2025
Viewed by 480
Abstract
Salmonella therapies are a promising tool for the treatment of solid tumors. Salmonella can be engineered to increase their tumor infiltration, cell killing abilities, and immunostimulatory properties. However, bacterial therapies have often failed in clinical trials due to poor characterization. Mathematical models are [...] Read more.
Salmonella therapies are a promising tool for the treatment of solid tumors. Salmonella can be engineered to increase their tumor infiltration, cell killing abilities, and immunostimulatory properties. However, bacterial therapies have often failed in clinical trials due to poor characterization. Mathematical models are useful for predicting the immune response to cancer treatments and characterizing the properties of bacterial invasion. Herein we develop an ordinary differential equation-based model that combines bacterial therapies with classical anti-tumor immunotherapies. Our modeling results suggest that increasing bacterial localization to the tumor is key for therapeutic efficacy; however, increased intracellular invasion and direct bacterial mediated cytotoxicity does not reduce tumor growth. Further, the model suggests that enhancing T cell-mediated cell death by both bacterial stimulation of pro-inflammatory cytokines and activation of T cells via antigen cascade is critical for therapeutic efficacy. A balance of intracellular and extracellular Salmonella leads to more effective therapeutic response, which suggests a strategy for strain design to be tested in vivo. Overall, this model provides a system to predict which engineered features of Salmonella therapies lead to effective treatment outcomes. Full article
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21 pages, 6046 KiB  
Article
Mechanical Properties of Granular Sea Ice Under Uniaxial Compression: A Comparison of Piled and Level Ice
by Yubo Liu, Qingkai Wang, Peng Lu, Zhijun Li, Zhixing Li, Zhi Zong and Limin Zhang
J. Mar. Sci. Eng. 2025, 13(7), 1302; https://doi.org/10.3390/jmse13071302 - 3 Jul 2025
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Abstract
The proportion of granular ice in sea ice layers has markedly increased due to global warming. To investigate the uniaxial compressive behavior of granular sea ice, we conducted a series of experiments using natural piled and level ice samples collected from the Bohai [...] Read more.
The proportion of granular ice in sea ice layers has markedly increased due to global warming. To investigate the uniaxial compressive behavior of granular sea ice, we conducted a series of experiments using natural piled and level ice samples collected from the Bohai Sea. A total of 311 specimens were tested under controlled temperature conditions ranging from −15 °C to −2 °C and strain rates varying from 10−5 to 10−2 s−1. The effects of porosity, strain rate, and failure modes were studied. The results show that both the uniaxial compressive strength and uniaxial compressive elastic modulus were dependent on strain rate and porosity. Granular sea ice exhibited a non-monotonic strength dependence on strain rate, with the strength increasing in the ductile regime and decreasing in the brittle regime. In contrast, the elastic modulus increased monotonically with the strain rate. Both the strength and elastic modulus decreased with increasing porosity. Level ice consistently demonstrated higher strength and an elastic modulus than piled ice at equivalent porosities. Unified parametric models were developed to describe both properties across a wide range of strain rates encompassing the ductile-to-brittle (DBT) regime. The experimental results show that, as porosity decreased, the transition strain rate of granular sea ice shifted from 2.34 × 10−3 s−1 at high porosity (45%) to 1.42 × 10−4 s−1 at low porosity (10%) for level ice and 1.87 × 10−3 s−1 to 1.19 × 10−3 s−1 for piled ice. These results were compared with classical columnar ice models. These findings are useful for informing the design of vessel and coastal structures intended for use in ice-covered waters. Full article
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