Search Results (234)

In familial Alzheimer’s disease (FAD), presenilin 1 (PSEN1) E280A cholinergic-like neurons (ChLNs) induce aberrant secretion of extracellular amyloid beta (eAβ). How PSEN1 E280A ChLNs-eAβ affects microglial activity is still unknown. We obtained induced microglia-like cells (iMG) from human peripheral blood cells (hPBCs) in a 15-day differentiation process to investigate the effect of bolus addition of Aβ42, PSEN1 E280A cholinergic-like neuron (ChLN)-derived culture supernatants, and PSEN1 E280A ChLNs on wild type (WT) iMG, PSEN1 E280A iMG, and sporadic Alzheimer’s disease (SAD) iMG. We found that WT iMG cells, when challenged with non-cellular (e.g., lipopolysaccharide, LPS) or cellular (e.g., Aβ42, PSEN1 E280A ChLN-derived culture supernatants) microenvironments, closely resemble primary human microglia in terms of morphology (resembling an “amoeboid-like phenotype”), expression of surface markers (Ionized calcium-binding adapter molecule 1, IBA-1; transmembrane protein 119, TMEM119), phagocytic ability (high pHrodo™ Red E. coli BioParticles™ phagocytic activity), immune metabolism (i.e., high generation of reactive oxygen species, ROS), increase in mitochondrial membrane potential (ΔΨm), response to ATP-induced transient intracellular Ca²⁺ influx, cell polarization (cluster of differentiation 68 (CD68)/CD206 ratio: M1 phenotype), cell migration activity according to the scratch wound assay, and especially in their inflammatory response (secretion of cytokine interleukin-6, IL-6; Tumor necrosis factor alpha, TNF-α). We also found that PSEN1 E280A and SAD iMG are physiologically unresponsive to ATP-induced Ca²⁺ influx, have reduced phagocytic activity, and diminished expression of Triggering Receptor Expressed on Myeloid Cells 2 (TREM2) protein, but when co-cultured with PSEN1 E280A ChLNs, iMG shows an increase in pro-inflammatory phenotype (M1) and secretes high levels of cytokines IL-6 and TNF-α. As a result, PSEN1 E280A and SAD iMG induce apoptosis in PSEN1 E280A ChLNs as evidenced by abnormal phosphorylation of protein TAU at residue T205 and cleaved caspase 3 (CC3). Taken together, these results suggest that PSEN1 E280A ChLNs initiate a vicious cycle between damaged neurons and M1 phenotype microglia, resulting in excessive ChLN death. Our findings provide a suitable platform for the exploration of novel therapeutic approaches for the fight against FAD. Full article

This study evaluates the agronomic and environmental performance of pelletized compost derived from olive mill waste as a sustainable alternative to mineral fertilizers for cultivating wheat (Triticum turgidum L.) under conventional tillage methods. A field experiment was conducted in semi-arid Spain, employing three fertilization strategies: inorganic (MAP + Urea), sewage sludge (SS), and organic compost pellets (OCP), each providing 150 kg N ha⁻¹. The parameters analyzed included wheat yield, grain quality, soil properties, and greenhouse gas (GHG) emissions. Inorganic fertilization yielded the highest productivity and nutrient uptake. However, the OCP treatment reduced grain yield by only 15%, while improving soil microbial activity and enzymatic responses. The SS and OCP treatments showed increased CO₂ and N₂O emissions compared to the control and inorganic plots. However, the OCP treatment also acted as a CH₄ sink. Nutrient use efficiency was greatest under mineral fertilization, though the OCP treatment outperformed the SS treatment. These results highlight the potential of OCP as a circular bio-based fertilizer that can enhance soil function and partially replace mineral inputs. Optimizing application timing is critical to aligning nutrient release with crop demand. Further long-term trials are necessary to evaluate their impact on the soil and improve environmental outcomes. Full article

Cordyceps militaris, a model species in the genus Cordyceps, is widely distributed globally and is known for its significant medicinal value. It has been traditionally used in Chinese medicine to enhance immunity, alleviate fatigue, and treat tumors, among other therapeutic purposes. Here, we successfully assembled a telomere-to-telomere (T2T) level genome of C. militaris CH1 using PacBio HiFi and Hi-C technologies. The assembled genome is 32.67 Mb in size, with an N50 of 4.70 Mb. Gene prediction revealed a total of 10,749 predicted genes in the C. militaris CH1 genome, with a gene completeness of 99.20%. Phylogenetic analysis showed the evolutionary relationship between C. militaris CH1 and other Cordyceps species, suggesting that the divergence between this strain and C. militaris ATCC 34164 occurred approximately 1.36 Mya. Combined transcriptomic and metabolomic analyses identified 842 differentially expressed genes and 2052 metabolites that were significantly altered under light stress, primarily involving key pathways related to amino acid metabolism, purine metabolism, and secondary metabolite biosynthesis. Joint analysis of genes and metabolites revealed 79 genes coding for enzymes associated with the synthesis of adenine and adenosine, with the expression of 52 genes being upregulated, consistent with the accumulation trends of adenine and adenosine. Four gene clusters related to the synthesis of cordycepin were identified, with a significant upregulation of cns3 (FUN_003263), suggesting that light stress may promote cordycepin biosynthesis. This comprehensive analysis not only provides new insights into the genomics, metabolomics, and functional gene research of C. militaris CH1 but also offers a potential biological foundation for understanding the synthesis mechanisms of cordycepin and its efficient production. Full article

The inherent brittleness of bio-based poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) significantly restricts its industrial applications despite its industrial compostability. Blending with elastomeric polymers addresses mechanical limitations; however, interfacial incompatibility compromises miscibility as our previous work established. Herein, we investigate coffee oil epoxide (COE) as a bio-based plasticizer for PHBV/natural rubber (NR) blends in sustainable packaging applications. COE, derived from spent coffee grounds, was incorporated into PHBV/NR/peroxide/coagent composites via twin-screw extrusion. FTIR spectroscopy with chemometric analysis confirmed successful COE incorporation (intensified CH₂ stretching: 2847, 2920 cm⁻¹; reduced crystallinity), with PCA and PLS-DA accounting for 67.9% and 54.4% of spectral variance. COE incorporation improved optical properties (7.73% increased lightness; 21.9% reduced yellowness). Rheological characterization through Cole–Cole and Han plots demonstrated enhanced phase compatibility in the PHBV/NR/COE blends. Mechanical testing showed characteristic reductions in flexural properties: strength decreased by 16.5% and modulus by 36.8%. Dynamic mechanical analysis revealed PHBV/NR/COE blends exhibited a single relaxation transition at 32 °C versus distinct glass transition temperatures in PHBV/NR blends. Tan δ deconvolution confirmed the transformation from bimodal distribution to a single broadened peak, indicating enhanced interfacial interactions and improved miscibility. These findings demonstrated COE’s potential as a sustainable additive for biodegradable PHBV-based packaging while valorizing food waste. Full article

This work presents the development of a biosensing platform for hydrogen peroxide (H₂O₂) electrochemical reduction. The developed platform uses a multi-walled carbon nanotube paste (PMWCNT) and the enzyme cholesterol oxidase (ChOx). The supramolecular architecture of the PMWCNT/ChOx platform was characterized using cyclic voltammetry, electrochemical impedance spectroscopy, and amperometry. The results indicated that the presence of ChOx enhances the sensitivity of electrochemical detection for H₂O₂ by 21 times compared to that without ChOx. The designed electrochemical sensing bio-platform for H₂O₂ shows a sensitivity of 26.15 µA/mM in the linear range from 0.4 to 4.0 mM, an LOD of 0.43 µM, and an LOQ of 1.31 µM. Furthermore, in silico studies (molecular dynamics simulations, molecular docking assays, and binding free energy calculations (ΔG_b)) were carried out to characterize and validate the molecular interaction between ChOx and H₂O₂. The computed data confirmed that the binding is spontaneous, and the type of labile interaction promotes a rapid electrochemical reduction of H₂O₂. Full article

Grifola frondosa, commonly known as turkey tail, is a valuable fungus with medicinal and culinary uses, rich in bioactive compounds like triterpenoid polysaccharides that contribute to health benefits. Here, we constructed a nearly complete genome of G. frondosa CH1 using Illumina, PacBio HiFi, and Hi-C sequencing technologies, resulting in a 35.74 Mb genome with 12,526 protein-coding genes. The genome spans 12 chromosomes, all with intact telomeric structures and no gaps. The BUSCO completeness scores of 95.1% and 99.1% for the genome and genes, respectively, indicate high assembly quality and high completeness of gene prediction. Phylogenetic analysis showed a close relationship between G. frondosa CH1 and Trametes cinnabarina. Transcriptomic analysis under varying light conditions showed changes in the expression of genes, especially those related to terpenoid synthesis, with several CAZymes and CYP450 genes also exhibiting light-induced variations. Ten triterpenoid secondary metabolite gene clusters were identified, three of which were light-sensitive, indicating that light exposure regulates triterpenoid metabolism. This study provides valuable data supporting the high-quality genome of G. frondosa and offers new insights into the light-induced regulation of its metabolism. Full article

Industrial residues are sources of functional biopolymers with interesting properties for textile applications. This study aims to evaluate the impact of enzymatic pre-treatment on oil yield and phenolic compounds’ content in an aqueous extraction process, as well as the functional properties incorporated into textiles. This research investigated the influence of residue granulometry, biomass percentage, and the application of enzymatic pre-treatment with different enzymes (cellulase, pectinase, xylanase) individually or in combination. Chestnut hedgehog (CH), tobacco plant stems (TPSs), vine shoot trimmings (VSTs), and beer spent grain (BSG) were explored. For textile functionalization, the extracted oils were incorporated into a bio-based formulation and applied on cotton fabric through pad-dry-cure. For CH, the pre-treatment with cellulase and xylanase achieved an oil yield of 149 and 148 mg oil/mL extract, respectively. With the combination of both enzymes, the richest oil in phenolic compounds was extracted: 1967.73 ± 16.86 mg GAE/g biomass. CH and TPS oils presented an antioxidant activity above 60%, and the functionalized textiles also showed the highest antioxidant potential and a UPF of 30. The textiles presented water repellence and washing fastness. This study demonstrates a sustainable oil extraction method and its potential application in the development of functional textiles. Full article

Among aquatic organisms, marine dinoflagellates are essential sources of bioactive metabolites. The benthic dinoflagellate Coolia malayensis produces metabolites that have exhibited substantial and specific cytotoxicity on cancer cells; however, isolation and identification of the purified compounds remain a challenge. This study reports C. malayensis biomass multi-step extraction plus chemical analyses for identifying compounds with antineoplastic activity. Through bio-directed fractionation, the cytotoxicity of extracts and fractions was tested on H1299 (lung), PC-3 (prostate), HeLa (cervical), and MCF-7 (breast) cancer cell lines. Dichloromethane (DCM) phase, hydroalcoholic (HYD) secondary extract, and methanolic (MET) extract showed cytotoxic effects on all cell lines. Active extracts and fractions were analyzed by HPLC-QTOF-MS, ¹H, and ¹³C NMR. Cell lines H1299 and PC-3 treated with fractions F4, F7, and DCM2-AQ-Ch sub-extract showed morphological changes resembling those observed in the apoptosis control, and no signs of necrosis were observed. The selectivity of fraction F7 was above 100 μg mL⁻¹ for healthy cells, while cytotoxic activity was observed in cancer cells. This fraction was identified as mostly fatty acids (FA) by NMR. Seventeen compounds with reported biological activities, such as antioxidant, analgesic, antiviral, and anticancer, were identified from C. malayensis extracts and fractions. Among them, the phycotoxins gambieric acid A and B, okadaic acid, and dinophysistoxin-1 were detected. Further studies are needed to reveal more significant anti-cancer potential from C. malayensis. Full article

Aflatoxin B1 (AFB1) can impair the growth of chickens and reduce the quality of eggs and meat, resulting in significant economic losses. The inclusion of mycotoxin detoxifying agents (MyDA) with binding properties in the diet is an efficient tool to reduce their absorption rate in the gastrointestinal tract. Our aim was to investigate the ability of two innovative MyDA (SeOX, a feed additive featuring a tri-octahedral smectite mixed with lignocellulose, and CHS, a di-octahedral smectite functionalized with an organic non-toxic modifier) in both reducing the bio-accessibility and mitigating the adverse effects of AFB1 in broilers exposed for 10 days to concentrations approaching the European Union maximum limits in feed (0.02 mg/kg). The amount of AFB1 in the excreta of birds, collected over four consecutive days (starting on day 7), was significantly lower (p < 0.001) in the group exposed to AFB1 alone compared to the groups treated with either SeOX or CHS. The calculated bio-accessibility was decreased by nearly 30% with both MyDA. This positive effect was reflected by a significant reduction (p < 0.001) in the oxidative stress (measured as serum antioxidant capacity and hepatic lipid peroxidation) induced by AFB1. Although antioxidant enzyme activities and glutathione levels were unaffected by any treatment, AFB1 significantly induced (p < 0.001) the upregulation of CYP2A6 and the downregulation of Nrf2; the latter was reverted by each MyDA. Overall, these results demonstrate that the selected MyDA are effective in limiting the AFB1 absorption rate, thereby mitigating or even reverting the oxidative stress induced by AFB1 in broilers. Full article

Biogas, one of the important controllable renewable energy sources, may be split into two streams: bio-CH₄ and bio-CO₂ using, among others, membrane processes. The proper optimization of such processes requires the knowledge of phenomena accompanying each specific CH₄–CO₂–membrane system (e.g., competitive sorption or swelling). The phenomena were analyzed for the polysulfone-based membrane used in a developed adsorptive–membrane system for biogas separation. The Dual Mode Sorption and partial immobilization models were used to describe the solubility and diffusion of CO₂, CH₄ and their mixtures in this material. The parameters of the models were determined based on pure-gas sorption isotherms measured gravimetrically and permeances of CO₂/CH₄ mixture components from our previous studies. It was found, among other things, that the membrane swelling caused by CO₂ was observed for pressures higher than 5 bar. The real selectivity (permselectivity) of CO₂ vs. CH₄ is significantly lower than the selectivity of pure gases (ideal selectivity), while the solubility selectivity of CO₂ vs. CH₄ in the mixture is higher than that of pure gases. This is due to the better affinity of CO₂ towards the tested polysulfone membrane, making CO₂ the dominant component in competitive sorption. The reduction in the permselectivity is mainly due to an approximately two-fold decrease in the CO₂ diffusion rate in the presence of CH₄. It was also found that the fraction of solubility in the fractional free volume (FFV) is dominant for both gases, pure and mixed, reaching 65–73% of the total solubility. Moreover, in CO₂/CH₄ mixtures, the mobility of methane in FFV disappears, which additionally confirms the displacement of methane by CO₂ from FFV. Full article

Objective: To evaluate the humoral response to and impact of SARS-CoV-2 vaccination in patients with systemic lupus erythematosus in a multicenter cohort design. Methods: Data for this analysis were obtained from the Study of Safety, Effectiveness and Duration of Immunity after Vaccination against SARS-CoV-2 in Patients with Immune-Mediated Inflammatory Diseases (SAFER), a prospective, multicenter, phase IV, real-world study conducted across different regions of Brazil from June/2021 to March/2024. Patients aged >18 years with systemic lupus erythematosus (SLE) who received any one of the SARS-CoV-2 vaccines approved by the Brazilian health regulatory agency (CoronaVac [inactivated SARS-CoV-2 vaccine], ChAdOx-1 [AstraZeneca], or BNT162b2 [Pfizer-BioNTech]) were included. Immunogenicity was assessed in pre- and post-vaccination blood samples, and patients were monitored in person and remotely for the occurrence and severity of COVID-19. Results: Two hundred and thirty-five patients with SLE who had completed their vaccination schedules (two doses + booster dose) were included in this study. Most patients were female (89.3%) and had low disease activity or were in remission (72.4%); the majority were also on some form of immunosuppressive therapy (58.1%). One hundred and sixteen patients received two doses of CoronaVac followed by one dose of BNT162b2 (Pfizer-BioNTech) vaccine, eighty-seven received two doses of ChAdOx1-S (AstraZeneca) followed by one dose of BNT162b2 (Pfizer-BioNTech) vaccine, and thirty-two received three doses of BNT162b2 (Pfizer-BioNTech) vaccine. Twenty-eight cases of COVID-19, none meeting criteria for severe COVID-19, were recorded in patients with respiratory symptoms after the second dose of a SARS-CoV-2 vaccine. Regarding immunogenicity, an increase in seroconversion rate was observed following consecutive vaccine doses, with no difference between vaccination schedules, reaching 97.57% seropositivity after a booster dose. The geometric mean IgG titers differed between the different vaccination schedules after the first and the second vaccine dose, being lowest for the CoronaVac-based schedule, but titers were similar after the administration of a booster dose. Conclusion: In patients with SLE, SARS-CoV-2 vaccines are immunogenic, inducing a robust humoral response. No severe outcomes associated with death or hospitalization were found in the evaluated patient sample. Complete vaccination schedules including a booster dose induced higher humoral responses than incomplete schedules, especially in patients initially immunized with an inactivated virus vaccine schedule and those with a suboptimal humoral response. Full article

Anaerobic digestion (AD) is a promising and yet a complex waste-to-energy technology. To optimize such a process, precise modeling is essential. Developing complex, mechanistically inspired AD models can result in an overwhelming number of parameters that require calibration. This study presents a novel approach that considers the role of trace metals (Ca, K, Mg, Na, Co, Cr, Cu, Fe, Ni, Pb, and Zn) in the modeling, numerical simulation, and optimization of the AD process in a batch bioreactor. In this context, BioModel is enhanced by incorporating the influence of metal activities on chemical, biochemical, and physicochemical processes. Trace metal-related parameters are also included in the calibration of all model parameters. The model’s reliability is rigorously validated by comparing simulation results with experimental data. The study reveals that perturbations of 5% in model parameter values significantly increase the discrepancy between simulated and experimental results up to threefold. Additionally, the study highlights how precise optimization of metal additives can enhance both the quantity and quality of biogas production. The optimal concentrations of trace metals increased biogas and CH₄ production by 5.4% and 13.5%, respectively, while H₂, H₂S, and NH₃ decreased by 28.2%, 43.6%, and 42.5%, respectively. Full article

The high mobility and dynamic nature of unmanned aerial vehicles (UAVs) pose significant challenges to clustering and routing in flying ad hoc networks (FANETs). Traditional methods often fail to achieve stable networks with efficient resource utilization and low latency. To address these issues, we propose a hybrid bio-inspired algorithm, HMAO, combining the mountain gazelle optimizer (MGO) and the aquila optimizer (AO). HMAO improves cluster stability and enhances data delivery reliability in FANETs. The algorithm uses MGO for efficient cluster head (CH) selection, considering UAV energy levels, mobility patterns, intra-cluster distance, and one-hop neighbor density, thereby reducing re-clustering frequency and ensuring coordinated operations. For cluster maintenance, a congestion-based approach redistributes UAVs in overloaded or imbalanced clusters. The AO-based routing algorithm ensures reliable data transmission from CHs to the base station by leveraging predictive mobility data, load balancing, fault tolerance, and global insights from ferry nodes. According to the simulations conducted on the network simulator (NS-3.35), the HMAO technique exhibits improved cluster stability, packet delivery ratio, low delay, overhead, and reduced energy consumption compared to the existing methods. Full article

An internal two-stage bioreactor constructed with a hydrogen chamber and a methane chamber with a working volume of 300 mL and 4700 mL, respectively, was operated using various kitchen waste (KW) concentrations from 10 to 80 g COD/L with a hydraulic retention time of 2 days to characterize the biomethane production performance. The results showed that daily biohythane production exhibited a similar increasing trend at KW concentrations of 10 to 40 g COD/L. The peak biomethane production was 2481 mL/day at a KW concentration of 40 g COD/L. The KW concentration could also affect the COD, carbohydrate, lipid, and protein removal efficiencies. These removal efficiencies were somehow dependent on the KW concentration, with two notable KW concentration groups of 10–20 g COD/L and 40–80 g COD/L. After 80 days of cultivation, Firmicutes dominated the hydrogen chamber, and Methanobacteriaceae and Methanomicrobiaceae dominated the methane chamber. This study presents the optimal KW concentration for high biohythane production efficiency in a novel internal two-stage bioreactor and reveals the dominant microorganisms in its microbial community. Full article

The increasing global energy demand, coupled with the urgent need to reduce CO₂ emissions, has intensified the search for renewable energy sources. Biogas, produced from agro-industrial biomass, presents a viable solution. In beer production, brewery’s spent grain (BSG), the largest by-product by volume, offers potential for bioenergy recovery. This study applied a biorefinery approach to BSG, extracting protein hydrolysates (PH) through mild alkaline hydrolysis and nanostructured lignin (LN) via the Ionic Liquid Method. The objective was to assess biogas production from the residual biorefinery biomass and evaluate the co-digestion of BSG with Olive Mill Wastewater (OMWW) and Olive Pomace (OP), by-products of the olive oil industry. Biogas was produced in lab-scale batch reactors and the quantity of biogas produced was measured via the volumetric method. Conversely, the amount of biomethane obtained was evaluated by introducing, in the production chain, an alkaline trap. Biogas yields were the highest for untreated BSG (1075.6 mL), co-digested BSG with OMWW (1130.1 mL), and BSG residue after PH extraction (814.9 mL). The concentration of biomethane obtained in the various samples ranged from 54.5 vol % (OMWW + BSG) to 76.59 vol % (BSG). An energy balance analysis considering both the theoretical energy consumed by a semi-continuous anaerobic digestion bioreactor and the energy produced as bio-CH₄ revealed that BSG after PH extraction was the most energy-efficient treatment, producing a net energy gain of 5.36 kJ. For the scope, the energy consumption was calculated by considering a PEIO index equal to 33% of the energy produced during the day, showing the highest biogas production. In contrast, the co-digested BSG with OMWW yielded the lowest net energy gain of 1.96 kJ. This comprehensive analysis highlights the energy efficiency of different treatments, identifying which process should be improved. Full article