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20 pages, 3604 KiB  
Article
Analysis of the Differences in Rhizosphere Microbial Communities and Pathogen Adaptability in Chili Root Rot Disease Between Continuous Cropping and Rotation Cropping Systems
by Qiuyue Zhao, Xiaolei Cao, Lu Zhang, Xin Hu, Xiaojian Zeng, Yingming Wei, Dongbin Zhang, Xin Xiao, Hui Xi and Sifeng Zhao
Microorganisms 2025, 13(8), 1806; https://doi.org/10.3390/microorganisms13081806 (registering DOI) - 1 Aug 2025
Abstract
In chili cultivation, obstacles to continuous cropping significantly compromise crop yield and soil health, whereas crop rotation can enhance the microbial environment of the soil and reduce disease incidence. However, its effects on the diversity of rhizosphere soil microbial communities are not clear. [...] Read more.
In chili cultivation, obstacles to continuous cropping significantly compromise crop yield and soil health, whereas crop rotation can enhance the microbial environment of the soil and reduce disease incidence. However, its effects on the diversity of rhizosphere soil microbial communities are not clear. In this study, we analyzed the composition and characteristics of rhizosphere soil microbial communities under chili continuous cropping (CC) and chili–cotton crop rotation (CR) using high-throughput sequencing technology. CR treatment reduced the alpha diversity indices (including Chao1, Observed_species, and Shannon index) of bacterial communities and had less of an effect on fungal community diversity. Principal component analysis (PCA) revealed distinct compositional differences in bacterial and fungal communities between the treatments. Compared with CC, CR treatment has altered the structure of the soil microbial community. In terms of bacterial communities, the relative abundance of Firmicutes increased from 12.89% to 17.97%, while the Proteobacteria increased by 6.8%. At the genus level, CR treatment significantly enriched beneficial genera such as RB41 (8.19%), Lactobacillus (4.56%), and Bacillus (1.50%) (p < 0.05). In contrast, the relative abundances of Alternaria and Fusarium in the fungal community decreased by 6.62% and 5.34%, respectively (p < 0.05). Venn diagrams and linear discriminant effect size analysis (LEfSe) further indicated that CR facilitated the enrichment of beneficial bacteria, such as Bacillus, whereas CC favored enrichment of pathogens, such as Firmicutes. Fusarium solani MG6 and F. oxysporum LG2 are the primary chili root-rot pathogens. Optimal growth occurs at 25 °C, pH 6: after 5 days, MG6 colonies reach 6.42 ± 0.04 cm, and LG2 5.33 ± 0.02 cm, peaking in sporulation (p < 0.05). In addition, there are significant differences in the utilization spectra of carbon and nitrogen sources between the two strains of fungi, suggesting their different ecological adaptability. Integrated analyses revealed that CR enhanced soil health and reduced the root rot incidence by optimizing the structure of soil microbial communities, increasing the proportion of beneficial bacteria, and suppressing pathogens, providing a scientific basis for microbial-based soil management strategies in chili cultivation. Full article
(This article belongs to the Section Microbiomes)
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14 pages, 2514 KiB  
Article
The Transcriptional Coactivator DEAD/H Box 5 (DDX5) Gene Is a Target of the Transcription Factor E2F1 Deregulated from the Tumor Suppressor pRB
by Rinka Nakajima, Yaxuan Zhou, Mashiro Shirasawa, Mariana Fikriyanti, Ritsuko Iwanaga, Andrew P. Bradford, Kenta Kurayoshi, Keigo Araki and Kiyoshi Ohtani
Genes 2025, 16(8), 929; https://doi.org/10.3390/genes16080929 (registering DOI) - 1 Aug 2025
Abstract
Background: DEAD/H box 5 (DDX5) serves as a transcriptional coactivator for several transcription factors including E2F1, the primary target of the tumor suppressor pRB. E2F1 physiologically activated by growth stimulation activates growth-related genes and promotes cell proliferation. In contrast, upon loss of pRB [...] Read more.
Background: DEAD/H box 5 (DDX5) serves as a transcriptional coactivator for several transcription factors including E2F1, the primary target of the tumor suppressor pRB. E2F1 physiologically activated by growth stimulation activates growth-related genes and promotes cell proliferation. In contrast, upon loss of pRB function due to oncogenic changes, E2F1 is activated out of restraint by pRB (deregulated E2F1) and stimulates tumor suppressor genes such as ARF, which activates the tumor suppressor p53, to suppress tumorigenesis. We have recently reported that DDX5 augments deregulated E2F1 activity to induce tumor suppressor gene expression and apoptosis. During the analyses, we noted that over-expression of E2F1 increased DDX5 expression, suggesting a feed forward loop in E2F1 activation through DDX5. Objective: We thus examined whether the DDX5 gene is a target of deregulated E2F1. Method: For this purpose, we performed promoter analysis and ChIP assay. Result: The DDX5 promoter did not possess typical E2F binding consensus but contained several GC repeats observed in deregulated E2F1 targets. Insertion of point mutations in these GC repeats decreased responsiveness to deregulated E2F1 induced by over-expression of E2F1, but scarcely affected responsiveness to growth stimulation. ChIP assays showed that deregulated E2F1 induced by over-expression of E2F1 or expression of E1a, which binds pRB and releases E2F1, bound to the DDX5 gene, while physiological E2F1 induced by growth stimulation did not. Conclusions: These results suggest that the DDX5 gene is a target of deregulated E2F1, generating a feed forward loop mediating tumor suppressive E2F1 activity. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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14 pages, 2284 KiB  
Article
Rhizobacteria’s Effects on the Growth and Competitiveness of Solidago canadensis Under Nutrient Limitation
by Zhi-Yun Huang, Ying Li, Hu-Anhe Xiong, Misbah Naz, Meng-Ting Yan, Rui-Ke Zhang, Jun-Zhen Liu, Xi-Tong Ren, Guang-Qian Ren, Zhi-Cong Dai and Dao-Lin Du
Agriculture 2025, 15(15), 1646; https://doi.org/10.3390/agriculture15151646 - 30 Jul 2025
Viewed by 113
Abstract
The role of rhizosphere bacteria in facilitating plant invasion is increasingly acknowledged, yet the influence of specific microbial functional traits remains insufficiently understood. This study addresses this gap by isolating two bacterial strains, Bacillus sp. ScRB44 and Pseudomonas sp. ScRB22, from the rhizosphere [...] Read more.
The role of rhizosphere bacteria in facilitating plant invasion is increasingly acknowledged, yet the influence of specific microbial functional traits remains insufficiently understood. This study addresses this gap by isolating two bacterial strains, Bacillus sp. ScRB44 and Pseudomonas sp. ScRB22, from the rhizosphere of the invasive weed Solidago canadensis. We assessed their nitrogen utilization capacity and indoleacetic acid (IAA) production capabilities to evaluate their ecological functions. Our three-stage experimental design encompassed strain promotion, nutrient stress, and competition phases. Bacillus sp. ScRB44 demonstrated robust IAA production and significantly improved the nitrogen utilization efficiency, significantly enhancing S. canadensis growth, especially under nutrient-poor conditions, and promoting a shift in biomass allocation toward the roots, thereby conferring a competitive advantage over native species. Conversely, Pseudomonas sp. ScRB22 exhibited limited functional activity and a negligible impact on plant performance. These findings underscore that the ecological impact of rhizosphere bacteria on invasive weeds is closely linked to their specific growth-promoting functions. By enhancing stress adaptation and optimizing resource allocation, certain microorganisms may facilitate the establishment of invasive weeds in adverse environments. This study highlights the significance of microbial functional traits in invasion ecology and suggests novel approaches for microbiome-based invasive weed management, with potential applications in agricultural soil health improvement and ecological restoration. Full article
(This article belongs to the Topic Microbe-Induced Abiotic Stress Alleviation in Plants)
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14 pages, 3999 KiB  
Article
The Fabrication of Porous Al2O3 Ceramics with Ultra-High Mechanical Strength and Oil Conductivity via Reaction Bonding and the Addition of Pore-Forming Agents
by Ye Dong, Xiaonan Yang, Hao Li, Zun Xia and Jinlong Yang
Materials 2025, 18(15), 3574; https://doi.org/10.3390/ma18153574 - 30 Jul 2025
Viewed by 124
Abstract
Reaction bonding (RB) using Al powder is an effective method for preparing porous ceramics with low shrinkage, high porosity, and high strength. However, it remains challenging to optimize mechanical strength and oil conductivity simultaneously for atomizer applications. Herein, aiming at addressing this issue, [...] Read more.
Reaction bonding (RB) using Al powder is an effective method for preparing porous ceramics with low shrinkage, high porosity, and high strength. However, it remains challenging to optimize mechanical strength and oil conductivity simultaneously for atomizer applications. Herein, aiming at addressing this issue, porous Al2O3 ceramics with ultra-high mechanical strength and oil conductivity were fabricated via the RB process using polymethyl methacrylate (PMMA) microspheres as the pore-forming agent. The pore structure was gradually optimized by regulating the additive amount, particle size, and particle gradation of PMMA microspheres. The bimodal pores, formed by Al oxidation-induced hollow structures (enhancing bonding force) and burnout of large-sized PMMA microspheres, significantly improved mechanical strength; meanwhile, three-dimensional interconnected pores derived from particle gradation increased the diversity and quantity of oil-conduction channels, boosting oil conductivity. Consequently, under an open porosity of 58.2 ± 0.1%, a high compressive strength of 7.9 ± 0.3 MPa (a 54.7% improvement) and an excellent oil conductivity of 2.1 ± 0.0 mg·s−1 (a 46.5% improvement) were achieved. This superior performance combination, overcoming the trade-off between strength and oil conductivity, demonstrates substantial application potential in atomizers. Full article
(This article belongs to the Section Advanced and Functional Ceramics and Glasses)
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14 pages, 2361 KiB  
Article
Geochemical Characteristics of the Hida Granitoids in the Unazuki and Katakaigawa Areas, Central Japan
by Kazuki Oishi, Rui Kuwahara, Kazuya Shimooka and Motohiro Tsuboi
Geosciences 2025, 15(8), 285; https://doi.org/10.3390/geosciences15080285 - 29 Jul 2025
Viewed by 190
Abstract
The Hida Belt in central Japan is a key geological unit for understanding the crustal growth of the Eurasian continent in the Mesozoic. However, while previous studies have focused primarily on geochronology, the geochemical characteristics of its rocks and minerals remain largely unexplored. [...] Read more.
The Hida Belt in central Japan is a key geological unit for understanding the crustal growth of the Eurasian continent in the Mesozoic. However, while previous studies have focused primarily on geochronology, the geochemical characteristics of its rocks and minerals remain largely unexplored. This study investigates the geochemical characteristics and magmatic processes of the Hida granitoids, including adakitic rocks, distributed in the Unazuki and Katakaigawa areas. Whole-rock major oxides and trace elements, as well as Rb-Sr isotopes, were analyzed. Based on Rb–Sr isotopic compositions, the Hida granitoids are classified into two types. The younger and older granitoids in the Unazuki area, categorized as Type I, exhibit a narrow range of isotopic ratios, whereas the older granitoids in the Katakaigawa area, classified as Type II, display significantly higher values than those of Type I. The geochemical data suggest that the adakitic rocks in the older granitoids originated from interaction with alkali-rich melts or fluids, while those in the younger granitoids were derived from hydrous felsic magmas sourced from subducted oceanic crust. These findings provide new insights into the formation and evolution of granitic magmatism in the Hida Belt. Full article
(This article belongs to the Section Geochemistry)
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39 pages, 8119 KiB  
Article
Magmatic Redox Evolution and Porphyry–Skarn Transition in Multiphase Cu-Mo-W-Au Systems of the Eocene Tavşanlı Belt, NW Türkiye
by Hüseyin Kocatürk, Mustafa Kumral, Hüseyin Sendir, Mustafa Kaya, Robert A. Creaser and Amr Abdelnasser
Minerals 2025, 15(8), 792; https://doi.org/10.3390/min15080792 - 28 Jul 2025
Viewed by 250
Abstract
This study explores the magmatic and hydrothermal evolution of porphyry–skarn–transitional Cu-Mo-W-Au systems within the Nilüfer Mineralization Complex (NMC), located in the westernmost segment of the Eocene Tavşanlı Metallogenic Belt, NW Türkiye. Through integration of field data, whole-rock geochemistry, Re–Os molybdenite dating, and amphibole–biotite [...] Read more.
This study explores the magmatic and hydrothermal evolution of porphyry–skarn–transitional Cu-Mo-W-Au systems within the Nilüfer Mineralization Complex (NMC), located in the westernmost segment of the Eocene Tavşanlı Metallogenic Belt, NW Türkiye. Through integration of field data, whole-rock geochemistry, Re–Os molybdenite dating, and amphibole–biotite mineral chemistry, the petrogenetic controls on mineralization across four spatially associated mineralized regions (Kirazgedik, Güneybudaklar, Kozbudaklar, and Delice) were examined. The earliest and thermally most distinct phase is represented by the Kirazgedik porphyry system, characterized by high temperature (~930 °C), oxidized quartz monzodioritic intrusions emplaced at ~2.7 kbar. Rising fO2 and volatile enrichment during magma ascent facilitated structurally focused Cu-Mo mineralization. At Güneybudaklar, Re–Os geochronology yields an age of ~49.9 Ma, linking Mo- and W-rich mineralization to a transitional porphyry–skarn environment developed under moderately oxidized (ΔFMQ + 1.8 to +0.5) and hydrous (up to 7 wt.% H2O) magmatic conditions. Kozbudaklar represents a more reduced, volatile-poor skarn system, leading to Mo-enriched scheelite mineralization typical of late-stage W-skarns. The Delice system, developed at the contact of felsic cupolas and carbonates, records the broadest range of redox and fluid compositions. Mixed oxidized–reduced fluid signatures and intense fluid–rock interaction reflect complex, multistage fluid evolution involving both magmatic and external inputs. Geochemical and mineralogical trends—from increasing silica and Rb to decreasing Sr and V—trace a systematic evolution from mantle-derived to felsic, volatile-rich magmas. Structurally, mineralization is controlled by oblique fault zones that localize magma emplacement and hydrothermal flow. These findings support a unified genetic model in which porphyry and skarn mineralization styles evolved continuously from multiphase magmatic systems during syn-to-post-subduction processes, offering implications for exploration models in the Western Tethyan domain. Full article
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40 pages, 1378 KiB  
Systematic Review
Liquid Biopsy Biomarkers in Metastatic Castration-Resistant Prostate Cancer Treated with Second-Generation Antiandrogens: Ready for Clinical Practice? A Systematic Review
by Andrei-Vlad Badulescu, Razvan Rahota, Alon Vigdorovits and Ovidiu Laurean Pop
Cancers 2025, 17(15), 2482; https://doi.org/10.3390/cancers17152482 - 27 Jul 2025
Viewed by 361
Abstract
Background: Second-generation androgen receptor signaling inhibitors are one of the main treatment options in metastatic castration-resistant prostate cancer (mCRPC). Nonetheless, a considerable proportion show limited response to treatment, which indicates the need for convenient, easily accessible predictor biomarkers, a role suited for [...] Read more.
Background: Second-generation androgen receptor signaling inhibitors are one of the main treatment options in metastatic castration-resistant prostate cancer (mCRPC). Nonetheless, a considerable proportion show limited response to treatment, which indicates the need for convenient, easily accessible predictor biomarkers, a role suited for liquid biopsy. Methods: We conducted a PRISMA-compliant systematic review of four databases (Embase, Medline, Scopus, Web of Science) to identify all studies (observational studies and clinical trials) investigating cell-free DNA, circulating tumor cells, exosomes, and circulating RNAs as prognostic markers in metastatic castration-resistant patients starting androgen receptor signaling inhibitors. We excluded studies that evaluated combination therapies, rare histological subtypes or included nonmetastatic or castrate-sensitive disease. We also evaluated whether published papers followed reporting guidelines (REMARK, STROBE, or CONSORT for abstracts). Results: We identified a total of 123 reports, from which we identified only a few well-studied and consistent biomarkers: androgen receptor overexpression/copy number gain and splice variant 7, as well as disease burden markers (circulating tumor DNA fraction and circulating tumor cell concentration). Alterations or copy number loss in tumor suppressors PTEN, RB1, and TP53 were second in terms of quantity and consistency of evidence. However, a large majority of identified biomarkers were relatively understudied or inconsistent. We identified two potential vulnerabilities: inconsistent adherence to reporting guidelines and the under-inclusion of patients of non-Western European ancestry. Conclusions: A large number of biomarkers were linked to worse outcomes in prostate cancer; nonetheless, in most cases, the evidence is limited or inconsistent, or even contradictory. The main exceptions pertain to androgen receptor signaling and disease burden, and, to a smaller extent, to certain tumor suppressor genes. Further studies are needed to confirm their clinical utility, using clear and consistent methodologies and including patients from currently understudied populations. Full article
(This article belongs to the Special Issue Recent Advances in Liquid Biopsy Biomarkers of Cancer)
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16 pages, 1145 KiB  
Review
Beyond Global Metrics: The U-Smile Method for Explainable, Interpretable, and Transparent Variable Selection in Risk Prediction Models
by Katarzyna B. Kubiak, Agata Konieczna, Anna Tyranska-Fobke and Barbara Więckowska
Appl. Sci. 2025, 15(15), 8303; https://doi.org/10.3390/app15158303 - 25 Jul 2025
Viewed by 113
Abstract
Variable selection (VS) is a critical step in developing predictive binary classification (BC) models. Many traditional methods for assessing the added value of a candidate variable provide global performance summaries and lack an interpretable graphical summary of results. To address this limitation, we [...] Read more.
Variable selection (VS) is a critical step in developing predictive binary classification (BC) models. Many traditional methods for assessing the added value of a candidate variable provide global performance summaries and lack an interpretable graphical summary of results. To address this limitation, we developed the U-smile method, a residual-based, post hoc evaluation approach for assessing prediction improvements and worsening separately for events and non-events. The U-smile method produces three families of interpretable BA-RB-I coefficients at three levels of generality and a standardized graphical summary through U-smile and prediction improvement–worsening (PIW) plots, enabling transparent, interpretable, and explainable VS. Validated in balanced and imbalanced BC scenarios, the method proved robust to class imbalance and collinearity, and more sensitive than traditional metrics in detecting subtle but meaningful effects. Moreover, the method’s intuitive visual output (U-smile plot) facilitates the rapid communication of results to non-technical stakeholders, bridging the gap between data science and applied decision-making. The U-smile method supports both local and global evaluations and complements existing explainable machine learning (XML) and artificial intelligence (XAI) tools without overlapping in their functions. The U-smile method offers a transparency-enhancing and human-oriented approach for ethical and fair VS, making it highly suited for high-stakes domains, e.g., healthcare and public health. Full article
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19 pages, 2243 KiB  
Article
Theoretical Calculation of Ground and Electronically Excited States of MgRb+ and SrRb+ Molecular Ions: Electronic Structure and Prospects of Photo-Association
by Mohamed Farjallah, Hela Ladjimi, Wissem Zrafi and Hamid Berriche
Atoms 2025, 13(8), 69; https://doi.org/10.3390/atoms13080069 - 25 Jul 2025
Viewed by 284
Abstract
In this work, a comprehensive theoretical investigation is carried out to explore the electronic and spectroscopic properties of selected diatomic molecular ions MgRb+ and SrRb+. Using high-level ab initio calculations based on a pseudopotential approach, along with large Gaussian basis [...] Read more.
In this work, a comprehensive theoretical investigation is carried out to explore the electronic and spectroscopic properties of selected diatomic molecular ions MgRb+ and SrRb+. Using high-level ab initio calculations based on a pseudopotential approach, along with large Gaussian basis sets and full valence configuration interaction (FCI), we accurately determine adiabatic potential energy curves, spectroscopic constants, transition dipole moments (TDMs), and permanent electric dipole moments (PDMs). To deepen our understanding of these systems, we calculate radiative lifetimes for vibrational levels in both ground and low-lying excited electronic states. This includes evaluating spontaneous and stimulated emission rates, as well as the effects of blackbody radiation. We also compute Franck–Condon factors and analyze photoassociation processes for both ions. Furthermore, to explore low-energy collisional dynamics, we investigate elastic scattering in the first excited states (21Σ+) describing the collision between the Ra atom and Mg+ or Sr+ ions. Our findings provide detailed insights into the theoretical electronic structure of these molecular ions, paving the way for future experimental studies in the field of cold and ultracold molecular ion physics. Full article
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21 pages, 4388 KiB  
Article
An Omni-Dimensional Dynamic Convolutional Network for Single-Image Super-Resolution Tasks
by Xi Chen, Ziang Wu, Weiping Zhang, Tingting Bi and Chunwei Tian
Mathematics 2025, 13(15), 2388; https://doi.org/10.3390/math13152388 - 25 Jul 2025
Viewed by 244
Abstract
The goal of single-image super-resolution (SISR) tasks is to generate high-definition images from low-quality inputs, with practical uses spanning healthcare diagnostics, aerial imaging, and surveillance systems. Although cnns have considerably improved image reconstruction quality, existing methods still face limitations, including inadequate restoration of [...] Read more.
The goal of single-image super-resolution (SISR) tasks is to generate high-definition images from low-quality inputs, with practical uses spanning healthcare diagnostics, aerial imaging, and surveillance systems. Although cnns have considerably improved image reconstruction quality, existing methods still face limitations, including inadequate restoration of high-frequency details, high computational complexity, and insufficient adaptability to complex scenes. To address these challenges, we propose an Omni-dimensional Dynamic Convolutional Network (ODConvNet) tailored for SISR tasks. Specifically, ODConvNet comprises four key components: a Feature Extraction Block (FEB) that captures low-level spatial features; an Omni-dimensional Dynamic Convolution Block (DCB), which utilizes a multidimensional attention mechanism to dynamically reweight convolution kernels across spatial, channel, and kernel dimensions, thereby enhancing feature expressiveness and context modeling; a Deep Feature Extraction Block (DFEB) that stacks multiple convolutional layers with residual connections to progressively extract and fuse high-level features; and a Reconstruction Block (RB) that employs subpixel convolution to upscale features and refine the final HR output. This mechanism significantly enhances feature extraction and effectively captures rich contextual information. Additionally, we employ an improved residual network structure combined with a refined Charbonnier loss function to alleviate gradient vanishing and exploding to enhance the robustness of model training. Extensive experiments conducted on widely used benchmark datasets, including DIV2K, Set5, Set14, B100, and Urban100, demonstrate that, compared with existing deep learning-based SR methods, our ODConvNet method improves Peak Signal-to-Noise Ratio (PSNR) and Structural Similarity Index (SSIM), and the visual quality of SR images is also improved. Ablation studies further validate the effectiveness and contribution of each component in our network. The proposed ODConvNet offers an effective, flexible, and efficient solution for the SISR task and provides promising directions for future research. Full article
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17 pages, 2978 KiB  
Article
Soluble Oncoimmunome Signatures Predict Muscle Mass Response to Enriched Immunonutrition in Cancer Patients: Subanalysis of a Multicenter Randomized Clinical Trial
by Sara Cuesta-Sancho, Juan José López Gomez, Pedro Pablo García-Luna, David Primo, Antonio J. Martínez-Ortega, Olatz Izaola, Tamara Casañas, Alicia Calleja, David Bernardo and Daniel de Luis
Nutrients 2025, 17(15), 2421; https://doi.org/10.3390/nu17152421 - 24 Jul 2025
Viewed by 680
Abstract
Background/Objectives: Enriched oral nutritional supplementation (ONS) has been shown to increase muscle mass in cancer patients. This study aims to identify the immunomodulatory effects and predictive biomarkers associated with this intervention. Methods: The soluble levels of 92 immune- and oncology-related mediators were determined [...] Read more.
Background/Objectives: Enriched oral nutritional supplementation (ONS) has been shown to increase muscle mass in cancer patients. This study aims to identify the immunomodulatory effects and predictive biomarkers associated with this intervention. Methods: The soluble levels of 92 immune- and oncology-related mediators were determined before and after an intervention (8 weeks) in 28 patients with cancer receiving either a standard (n = 14) or an enriched ONS (n = 14) using the Olink proteomics analysis pipeline (Olink® Target 96 Immuno-Oncology panel (Uppsala, Sweden)) Results: Patients receiving enriched ONS experienced an average weight gain of 1.4 kg and a muscle mass increase of 2.2 kg after 8 weeks, both statistically significant (p < 0.05), while no such improvements were observed in the standard ONS group. Inflammatory markers TRAIL and LAMP3 were significantly reduced, along with an increase in Gal-1, suggesting lower inflammation and enhanced myogenic differentiation. However, patients who failed to gain muscle mass with the enriched formula showed a more aggressive inflammatory profile, characterized by higher serum levels of soluble MUC16, ARG, and IL12RB1. Interestingly, muscle mass gain could be predicted before the intervention, as responders had lower baseline levels of PGF, CD28, and IL12RB1. These differences were specific to recipients of the enriched ONS, confirming its immunomodulatory effects. Conclusions: Our findings support the use of enriched oral nutritional supplementation (ONS) as an effective strategy not only to enhance caloric and protein intake but also to promote anabolism and preserve muscle mass in cancer patients. The identification of immune profiles suggests that specific biomarkers could be used to predict which patients will benefit most from this type of intervention. This may allow for the implementation of personalized immunonutrition strategies that optimize resource allocation and improve clinical outcomes, particularly in vulnerable populations at risk of cachexia. Full article
(This article belongs to the Section Clinical Nutrition)
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32 pages, 10235 KiB  
Article
Estradiol Downregulates MicroRNA-193a to Mediate Its Anti-Mitogenic Actions on Human Coronary Artery Smooth Muscle Cell Growth
by Lisa Rigassi, Marinella Rosselli, Brigitte Leeners, Mirel Adrian Popa and Raghvendra Krishna Dubey
Cells 2025, 14(15), 1132; https://doi.org/10.3390/cells14151132 - 23 Jul 2025
Viewed by 248
Abstract
The abnormal growth of smooth muscle cells (SMCs) contributes to the vascular remodeling associated with coronary artery disease, a leading cause of death in women. Estradiol (E2) mediates cardiovascular protective actions, in part, by inhibiting the abnormal growth (proliferation and migration) of SMCs [...] Read more.
The abnormal growth of smooth muscle cells (SMCs) contributes to the vascular remodeling associated with coronary artery disease, a leading cause of death in women. Estradiol (E2) mediates cardiovascular protective actions, in part, by inhibiting the abnormal growth (proliferation and migration) of SMCs through various mechanism. Since microRNAs (miRNAs) play a major role in regulating cell growth and vascular remodeling, we hypothesize that miRNAs may mediate the protective actions of E2. Following preliminary leads from E2-regulated miRNAs, we found that platelet-derived growth factor (PDGF)-BB-induced miR-193a in SMCs is downregulated by E2 via estrogen receptor (ER)α, but not the ERβ or G-protein-coupled estrogen receptor (GPER). Importantly, miR-193a is actively involved in regulating SMC functions. The ectopic expression of miR-193a induced vascular SMC proliferation and migration, while its suppression with antimir abrogated PDGF-BB-induced growth, effects that were similar to E2. Importantly, the restoration of miR-193a abrogated the anti-mitogenic actions of E2 on PDGF-BB-induced growth, suggesting a key role of miR-193a in mediating the growth inhibitory actions of E2 in vascular SMCs. E2-abrogated PDGF-BB, but not miR-193a, induced SMC growth, suggesting that E2 blocks the PDGF-BB-induced miR-193a formation to mediate its anti-mitogenic actions. Interestingly, the PDGF-BB-induced miR-193a formation in SMCs was also abrogated by 2-methoxyestradiol (2ME), an endogenous E2 metabolite that inhibits SMC growth via an ER-independent mechanism. Furthermore, we found that miR-193a induces SMC growth by activating the phosphatidylinositol 3-kinases (PI3K)/Akt signaling pathway and promoting the G1 to S phase progression of the cell cycle, by inducing Cyclin D1, Cyclin Dependent Kinase 4 (CDK4), Cyclin E, and proliferating-cell-nuclear-antigen (PCNA) expression and Retinoblastoma-protein (RB) phosphorylation. Importantly, in mice, treatment with miR-193a antimir, but not its control, prevented cuff-induced vascular remodeling and significantly reducing the vessel-wall-to-lumen ratio in animal models. Taken together, our findings provide the first evidence that miR-193a promotes SMC proliferation and migration and may play a key role in PDGF-BB-induced vascular remodeling/occlusion. Importantly, E2 prevents PDGF-BB-induced SMC growth by downregulating miR-193a formation in SMCs. Since, miR-193a antimir prevents SMC growth as well as cuff-induced vascular remodeling, it may represent a promising therapeutic molecule against cardiovascular disease. Full article
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12 pages, 2384 KiB  
Article
Ultrahigh Water Permeance of a Reduced Graphene Oxide Membrane for Separation of Dyes in Wastewater
by Chengju Wu, Shouyuan Hu, Shoupeng Li, Hangxiang Zhuge, Liuhua Mu, Jie Jiang, Pei Li and Liang Chen
Inorganics 2025, 13(8), 251; https://doi.org/10.3390/inorganics13080251 - 22 Jul 2025
Viewed by 244
Abstract
Membrane separation technology has shown significant potential in the treatment of mixed dye wastewater. In this study, a reduced graphene oxide (AH-rGO) membrane was prepared using an amino-hydrothermal method and applied for the first time in mixed dye separation. These membranes can selectively [...] Read more.
Membrane separation technology has shown significant potential in the treatment of mixed dye wastewater. In this study, a reduced graphene oxide (AH-rGO) membrane was prepared using an amino-hydrothermal method and applied for the first time in mixed dye separation. These membranes can selectively recover high-value dyes while addressing the technical challenges of balancing permeability and selectivity in traditional membrane materials, which are often at odds with each other in the treatment of mixed dye wastewater. We simulated actual dye wastewater using four dyes: methyl orange (MO), methyl blue (MB), rhodamine B (RB), and Victoria Blue B (VBB). The four combinations of mixed dyes were MO/VBB, RB/VBB, MO/MB, and RB/MB, all of which demonstrated high water permeability and separation efficiency. Notably, the MO/VBB combination achieved a maximum water permeability rate of 118.79 L m2 h−1 bar−1 and a separation factor of 24.2. The AH-rGO membrane is currently the highest-permeability membrane available, achieving excellent separation results with typical mixed dye wastewater. Additionally, it demonstrates good stability. The experimental results indicate that the overall performance of the AH-rGO membrane is superior to that ofother graphene oxide (GO) membranes, which reveals the significant application potential of this membrane in the field of mixed dye wastewater treatment. Full article
(This article belongs to the Special Issue Carbon Nanomaterials for Advanced Technology, 2nd Edition)
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15 pages, 4493 KiB  
Article
Biocompatibility of New Hydrogels Based on a Copolymer of Fish Collagen and Methyl Methacrylate Obtained Using Heterogeneous Photocatalysis Under the Influence of Visible Light
by Victoria Rumyantseva, Lyudmila Semenycheva, Natalia Valetova, Marfa Egorikhina, Ekaterina Farafontova, Daria Linkova, Ekaterina Levicheva, Diana Fukina and Evgeny Suleimanov
Polymers 2025, 17(15), 2002; https://doi.org/10.3390/polym17152002 - 22 Jul 2025
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Abstract
New stable three-dimensional hydrogels were obtained in an inert gas atmosphere in light in an aqueous dispersion of the main components: cod collagen, methyl methacrylate, polyethylene glycol, RbTe1.5W0.5O6 complex oxide, and modifying additives. The analysis of the new [...] Read more.
New stable three-dimensional hydrogels were obtained in an inert gas atmosphere in light in an aqueous dispersion of the main components: cod collagen, methyl methacrylate, polyethylene glycol, RbTe1.5W0.5O6 complex oxide, and modifying additives. The analysis of the new hydrogels’ cytotoxicity using the MTT assay showed that the cytotoxicity of the sample extracts was observed in a number of examples, but was decreased with increasing dilution of the extracts. The decrease in cell viability at high concentrations of the extract is likely caused by a decrease in the number of specific components of the complete culture medium used to produce extracts. It is related to the well-known adsorption of medium proteins by the gel component, high-molecular compounds included in the matrix. The stimulating effect of the substances included in its composition was observed with a significant dilution of the extract, i.e., the proliferative activity of the cells increased. The extract of the hydrogel hydrolysate sample and all its dilutions did not show cytotoxicity in the MTT assay examples. It determines the prospect of its use on the wound surface, since hydrogel destruction occurs under the action of body enzymes. The new hydrogel is a promising material for creating wound coverings or scaffolds. Full article
(This article belongs to the Section Polymer Networks and Gels)
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Article
FTIR Characterization of Asphalt SARA Fractions in Response to Rubber Modification
by Mohyeldin Ragab, Eslam Deef-Allah and Magdy Abdelrahman
Appl. Sci. 2025, 15(14), 8062; https://doi.org/10.3390/app15148062 - 20 Jul 2025
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Abstract
Asphalt–rubber binders (A-RBs) have a long and deep history of use; however, little is known regarding the interrelated chemical behaviors and miscibility of rubber with the asphalt fractions [saturates, aromatics, resins, and asphaltenes (SARA)]. This study comprehensively attempted to address this knowledge deficiency [...] Read more.
Asphalt–rubber binders (A-RBs) have a long and deep history of use; however, little is known regarding the interrelated chemical behaviors and miscibility of rubber with the asphalt fractions [saturates, aromatics, resins, and asphaltenes (SARA)]. This study comprehensively attempted to address this knowledge deficiency by employing Fourier transform infrared spectroscopy (FTIR) to investigate the chemical evolution of A-RBs. A-RB interacted at 190 °C and 3000 min−1 for 8 h was deemed to have the optimal rheological performance. FTIR of the liquid fractions of A-RB 190–3000 showed a prominent chemical shift in the SARA fractions, with new peaks that showed rubber polybutadiene (PB) and polystyrene migration into asphaltenes. Meanwhile, decreases in peaks with C–H aromatic bending and S=O stretching for the A-RB 190–3000 saturates showed that the rubber absorbed low-molecular-weight maltenes during swelling. Peaks associated with C=C aromatic appeared in saturates and aromatics, respectively, emphasizing that unsaturated components migrated from the rubber into the asphalt. Thermal analysis showed that rubber dissolution for this sample reached 82%. While a PB peak existed in asphaltenes of A-RB 220–3000, its intensity was diminished by depolymerization, thus compromising the integrity of the migrated rubber structure and generating less rheological enhancement. This study concludes that FTIR characterization of SARA fractions offers valuable insights into the interactions between asphalt and rubber, and that regulated processing conditions are essential for enhancing binder performance. Full article
(This article belongs to the Special Issue Infrastructure Resilience Analysis)
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