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27 pages, 1465 KB  
Review
Soil Amendments in Cold Regions: Applications, Challenges and Recommendations
by Zhenggong Miao, Ji Chen, Shouhong Zhang, Rui Shi, Tianchun Dong, Yaojun Zhao and Jingyi Zhao
Agriculture 2026, 16(3), 326; https://doi.org/10.3390/agriculture16030326 - 28 Jan 2026
Abstract
Soil amendments are widely applied to improve soil fertility and structure, yet their performance in cold regions is constrained by low accumulated temperatures, frequent freeze–thaw (FT) cycles, and permafrost sensitivity. In this review, ‘cold regions’ refers to high-latitude and high-altitude areas characterized by [...] Read more.
Soil amendments are widely applied to improve soil fertility and structure, yet their performance in cold regions is constrained by low accumulated temperatures, frequent freeze–thaw (FT) cycles, and permafrost sensitivity. In this review, ‘cold regions’ refers to high-latitude and high-altitude areas characterized by long winters and seasonally frozen soils and/or permafrost. We screened the peer-reviewed literature using keyword-based searches supplemented by backward/forward citation tracking; studies were included when they assessed amendment treatments in cold region soils and reported measurable changes in physical, chemical, biological, or environmental indicators. Across organic, inorganic, biological, synthetic, and composite amendments, the most consistent benefits are improved aggregation and nutrient retention, stronger pH buffering, and the reduced mobility of potentially toxic elements. However, effectiveness is often site-specific and may be short-lived, and unintended risks—including greenhouse gas emissions, contaminant accumulation, and thermal disturbances—can offset gains. Cold-specific constraints are dominated by limited thermal regimes, FT disturbance, and the trade-off between surface warming for production and permafrost protection. We therefore propose integrated countermeasures: prescription-based amendment portfolios tailored to soils and seasons; the prioritization and screening of local resources; coupling with engineering and land surface strategies; a minimal cold region MRV loop; and the explicit balancing of agronomic benefits with environmental safeguards. These insights provide actionable pathways for sustainable agriculture and ecological restoration in cold regions under climate change. Full article
(This article belongs to the Section Agricultural Soils)
15 pages, 1846 KB  
Article
Effects of Bamboo (Bambusa emeiensis) Expansion on Soil Microbial Communities in a Subtropical Evergreen Broad-Leaved Forest
by Wentao Xie, Shaolong Li and Liang Zhao
Sustainability 2026, 18(3), 1304; https://doi.org/10.3390/su18031304 - 28 Jan 2026
Abstract
Soil microorganisms are important components of forest ecosystems and play a key role in biogeochemical cycling. Bamboo is invasive due to its strong clonal expansion ability, which often leads to changes in plant communities and soil environments, thus affecting soil microorganisms. However, the [...] Read more.
Soil microorganisms are important components of forest ecosystems and play a key role in biogeochemical cycling. Bamboo is invasive due to its strong clonal expansion ability, which often leads to changes in plant communities and soil environments, thus affecting soil microorganisms. However, the existing research focuses on the response of moso bamboo (Phyllostachys edulis) and soil fungi and bacteria, and little attention is paid to other bamboo species and their impact on soil protists. In this study, we examined the effects of Bambusa emeiensis expansion on the soil microbial communities in subtropical evergreen broad-leaved forests. B. emeiensis expansion significantly reduced plant diversity and soil pH (p < 0.05). The expansion of B. emeiensis did not significantly change the relative abundance of dominant bacteria and fungi groups in the soil, but significantly changed the community composition of protists, including a significant increase in the relative abundance of Cercozoa, while the Evosea_X group and Ciliophora decreased significantly (p < 0.05). While α-diversity remained unchanged across all microbial groups, only protist community structure differed significantly (p = 0.026). The main driver of protist variation was identified as plant diversity decline by redundancy analysis (R2 = 0.760, p = 0.032). These results can be interpreted within a bottom-up regulatory framework, in which plant diversity is linked to changes in protist community composition. Overall, protists are an important group of organisms that help us understand the impact of bamboo growth on the environment. Their role in nutrient cycling and soil fertility suggests that changes in protist communities may have broader implications for ecosystem sustainability. This study provides a scientific reference for the ecological management of regional B. emeiensis and highlights the potential impact of protist community shifts on soil health and ecosystem resilience. Full article
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19 pages, 10270 KB  
Article
Functional Biofertilizer with Microbial and Enzyme Complex Improves Nutrients, Microbial Characteristics, and Crop Yield in Albic Soil of Heilongjiang Province, China
by Zhuoran Chen, Yue Wang, Xianying Zhang, Mingyi Zhao, Yuan Li, Shuqiang Wang, Lingli Wang, Yulan Zhang, Zhenhua Chen, Nan Jiang, Libin Tian, Yongjie Piao and Rui Jiang
Agronomy 2026, 16(3), 307; https://doi.org/10.3390/agronomy16030307 - 26 Jan 2026
Viewed by 72
Abstract
Soils with an albic horizon (characterized by a bleached, nutrient-poor eluvial layer), classified primarily as Albic Planosols and associated groups (e.g., Albic Luvisols and Retisols) in the World Reference Base for Soil Resources (WRB), are widespread in Northeast China and suffer from inherent [...] Read more.
Soils with an albic horizon (characterized by a bleached, nutrient-poor eluvial layer), classified primarily as Albic Planosols and associated groups (e.g., Albic Luvisols and Retisols) in the World Reference Base for Soil Resources (WRB), are widespread in Northeast China and suffer from inherent poor nutrient availability and low crop productivity. The present study aimed to evaluate the efficacy of novel microbial–enzyme composite biofertilizers in ameliorating Albic soils. This comprehensive assessment investigated their effects on soil nutrient availability, microbial community structure, and the activities of key enzymes involved in nutrient cycling (e.g., dehydrogenase and phosphatase). Concurrently, the impact on maize crop performance was determined by measuring changes in agronomic traits, including chlorophyll content, stem diameter, and final grain yield. A field experiment was conducted in Heilongjiang Province during the 2023 maize growing season using a randomized block design with six treatments: CF (conventional chemical fertilizer, 330 kg·ha−1 NPK), OF (chemical fertilizer + 1500 kg·ha−1 organic carrier), BF1 (OF + 75 kg·ha−1 marine actinomycetes), BF2 (OF + 75 kg·ha−1 actinomycetes + 45 kg·ha−1 phytase), BF3 (OF + 75 kg·ha−1 actinomycetes + 45 kg·ha−1 mycorrhizal fungi + 45 kg·ha−1 phytase), and BF4 (OF + 75 kg·ha−1 actinomycetes + 45 kg·ha−1 mycorrhizal fungi + 45 kg·ha−1 phytase + 45 kg·ha−1 β–glucosidase). The results showed that biofertilizers significantly increased microbial abundance and enzyme activity. The integrated treatment BF4 notably enhanced topsoil fungal abundance by 188.1% and dehydrogenase activity in the 0–20 cm layer, while also increasing available phosphorus by 92.6% at maturity. Although BF4 improved soil properties the most, BF3 produced the highest maize yield—boosting grain output by 18.3% over CF—and improved stem diameter and chlorophyll content. Strong correlations between microbial parameters and enzyme activities indicated a nutrient-cycling mechanism driven by microorganisms, with topsoil fungal abundance positively linked to alkaline phosphatase activity (r = 0.72) and subsoil bacterial abundance associated with available phosphorus (r = 0.65), demonstrating microbial–mediated carbon–phosphorus coupling. In conclusion, microbial–enzyme biofertilizers, particularly BF4, provide a sustainable strategy for enhancing Albic soil fertility and crop productivity. Full article
(This article belongs to the Special Issue Conventional and Alternative Fertilization of Crops)
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20 pages, 2130 KB  
Article
Valorizing Pruning Residues into Biochar for Remediating Acidified Cropland Soil: Effects on Fertility, Enzymes, and Bacterial Communities
by Haowen Li, Yingmei Huang, Juntao Zhang, Yongxin Liang, Jialong Wu and Kexing Liu
Agronomy 2026, 16(3), 296; https://doi.org/10.3390/agronomy16030296 - 24 Jan 2026
Viewed by 112
Abstract
Intensive agriculture has intensified soil acidification in southern China, threatening crop productivity and ecosystem sustainability. Biochar can neutralize acidity, improve pH buffering, and enhance nutrient retention and microbial habitat in acidic soils. Accordingly, we produced biochars from pruned eucalyptus (ABC), camphora (ZBC), and [...] Read more.
Intensive agriculture has intensified soil acidification in southern China, threatening crop productivity and ecosystem sustainability. Biochar can neutralize acidity, improve pH buffering, and enhance nutrient retention and microbial habitat in acidic soils. Accordingly, we produced biochars from pruned eucalyptus (ABC), camphora (ZBC), and guava (FBC) branches via pyrolysis at 500 °C. The three biochars were characterized by elemental analysis, Fourier Transform Infrared Spectroscopy (FTIR), and SEM (Scanning Electron Microscopy), and their effects on soil properties, enzyme activities, and bacterial communities were evaluated through a 56-day incubation experiment in an acidified, continuously cropped soil. Physicochemical characterization revealed that ZBC and FBC possessed more oxygen-containing functional groups and greater potential for pH buffering and nutrient release, whereas ABC exhibited higher aromaticity and structural stability. Biochar significantly increased soil pH by 0.62–1.42 units and improved nutrient availability and carbon pools (p < 0.05). Additionally, 4% ZBC increased urease and sucrase activities by 21.54% and 79.34%, respectively, while 2% FBC increased cellulase activity by 25.99%. High-throughput sequencing identified Acidobacteria and Proteobacteria as the dominant phyla; ZBC and FBC at 0.5% and 2% significantly increased Shannon and Chao1 indices. Redundancy analysis indicated that available potassium, pH, soil organic carbon, urease, sucrase, and cellulase were the primary drivers of bacterial community variation and positively associated with carbon-cycling phyla. These findings demonstrate that feedstock-specific biochar properties critically regulate soil biogeochemical processes, offering a sustainable strategy to remediate acidified soils and valorize agroforestry residues. Full article
(This article belongs to the Section Soil and Plant Nutrition)
10 pages, 1363 KB  
Review
A Review on the Trophic Shifts Among Habitat Types of the Red Fox (Vulpes vulpes Linnaeus) and Insights on Its Role as Bioindicator in Mediterranean Landscapes
by Salvatore Rizzo, Rafael Silveira Bueno and Tommaso La Mantia
Diversity 2026, 18(2), 62; https://doi.org/10.3390/d18020062 - 24 Jan 2026
Viewed by 117
Abstract
The red fox (Vulpes vulpes) is a widely distributed and highly adaptive small carnivore known by its generalist diet, which includes small mammals, invertebrates, and fruits. Despite its ecological relevance, how habitat heterogeneity affects its diet across the Mediterranean, a biodiversity [...] Read more.
The red fox (Vulpes vulpes) is a widely distributed and highly adaptive small carnivore known by its generalist diet, which includes small mammals, invertebrates, and fruits. Despite its ecological relevance, how habitat heterogeneity affects its diet across the Mediterranean, a biodiversity hotspot shaped by long-term human disturbance, remains insufficiently synthesized. In this review, we synthesized and analyzed published studies that reported habitat-specific data on the red fox diet in the Mediterranean. Only 12 studies met the selection criteria, and no study directly compared two different habitats. The studied areas covered three dominant habitats: forests, scrublands (garrigue), and agroecosystems, and diet items were grouped in 7 categories: birds, carcasses, fruits, invertebrates, lagomorphs, small mammals, and reptiles. Overall diet composition varied significantly, with invertebrates and fruits being the most frequent diet items. In turn, lagomorphs and reptiles were the least frequent. In turn, diet composition varied little across habitats, indicating that diet variation follows specific local resource abundance regardless of habitat type. Despite the analytical limitations associated with the limited availability of habitat-explicit studies. The results highlight the pronounced dietary plasticity of the red fox and its capacity to integrate resource availability across heterogeneous Mediterranean landscape mosaics. This trophic adaptability and top predator role support various ecosystem functions such as controlling invertebrate and small mammal populations, dispersing seeds, and cycling nutrients, reinforcing the potential of the red fox as functional bioindicator in the Mediterranean. Therefore, sustainable land management, especially in agricultural areas, and restoration efforts for degraded areas should consider the beneficial roles of generalist carnivores like the red fox. Full article
(This article belongs to the Section Biodiversity Loss & Dynamics)
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51 pages, 1843 KB  
Systematic Review
Remote Sensing of Woody Plant Encroachment: A Global Systematic Review of Drivers, Ecological Impacts, Methods, and Emerging Innovations
by Abdullah Toqeer, Andrew Hall, Ana Horta and Skye Wassens
Remote Sens. 2026, 18(3), 390; https://doi.org/10.3390/rs18030390 - 23 Jan 2026
Viewed by 158
Abstract
Globally, grasslands, savannas, and wetlands are degrading rapidly and increasingly being replaced by woody vegetation. Woody Plant Encroachment (WPE) disrupts natural landscapes and has significant consequences for biodiversity, ecosystem functioning, and key ecosystem services. This review synthesizes findings from 159 peer-reviewed studies identified [...] Read more.
Globally, grasslands, savannas, and wetlands are degrading rapidly and increasingly being replaced by woody vegetation. Woody Plant Encroachment (WPE) disrupts natural landscapes and has significant consequences for biodiversity, ecosystem functioning, and key ecosystem services. This review synthesizes findings from 159 peer-reviewed studies identified through a PRISMA-guided systematic literature review to evaluate the drivers of WPE, its ecological impacts, and the remote sensing (RS) approaches used to monitor it. The drivers of WPE are multifaceted, involving interactions among climate variability, topographic and edaphic conditions, hydrological change, land use transitions, and altered fire and grazing regimes, while its impacts are similarly diverse, influencing land cover structure, water and nutrient cycles, carbon and nitrogen dynamics, and broader implications for ecosystem resilience. Over the past two decades, RS has become central to WPE monitoring, with studies employing classification techniques, spectral mixture analysis, object-based image analysis, change detection, thresholding, landscape pattern and fragmentation metrics, and increasingly, machine learning and deep learning methods. Looking forward, emerging advances such as multi-sensor fusion (optical– synthetic aperture radar (SAR), Light Detection and Ranging (LiDAR)–hyperspectral), cloud-based platforms including Google Earth Engine, Microsoft Planetary Computer, and Digital Earth, and geospatial foundation models offer new opportunities for scalable, automated, and long-term monitoring. Despite these innovations, challenges remain in detecting early-stage encroachment, subcanopy woody growth, and species-specific patterns across heterogeneous landscapes. Key knowledge gaps highlighted in this review include the need for long-term monitoring frameworks, improved socio-ecological integration, species- and ecosystem-specific RS approaches, better utilization of SAR, and broader adoption of analysis-ready data and open-source platforms. Addressing these gaps will enable more effective, context-specific strategies to monitor, manage, and mitigate WPE in rapidly changing environments. Full article
28 pages, 876 KB  
Review
Comparison of Chemical Soil Properties of Temperate Grassland and Arable Land—A Review
by Matthias Filipiak and Katrin Kuka
Soil Syst. 2026, 10(1), 20; https://doi.org/10.3390/soilsystems10010020 - 22 Jan 2026
Viewed by 36
Abstract
Chemical soil properties contribute to the resilience of soil ecosystems. Healthy soils with optimal nutrient levels, balanced pH and good organic matter content are better able to withstand environmental stresses, such as drought, disease or pests. When comparing the chemical soil properties of [...] Read more.
Chemical soil properties contribute to the resilience of soil ecosystems. Healthy soils with optimal nutrient levels, balanced pH and good organic matter content are better able to withstand environmental stresses, such as drought, disease or pests. When comparing the chemical soil properties of temperate grassland and arable land, several differences can be observed due to differences in soil cover and management. Grasslands typically sequester more carbon, limit nitrogen leaching, and have lower nitrous oxide emissions and losses of phosphorus due to less soil disturbance and a more closed nutrient cycle. In contrast, arable land has higher nutrient losses through harvest, leaching, gaseous emissions and erosion due to regular tillage, frequent bare phases, and sequesters less carbon, typically due to higher mineralisation rates and lower nutrient returns. Monitoring and managing chemical soil properties, appropriate nutrient management, addition of organic matter such as organic fertilisers, inclusion of grassland phases and catch crops in crop rotations, incorporation of crop residues into the topsoil after harvest and further sustainable agricultural practices are essential to promote soil health. By optimising chemical soil properties, farmers and land managers can improve productivity, conserve natural resources and support the long-term sustainability of the soil ecosystem. Full article
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39 pages, 4728 KB  
Review
Advancing Sustainable Agriculture Through Aeroponics: A Critical Review of Integrated Water–Energy–Nutrient Management and Environmental Impact Mitigation
by Shen-Wei Chu and Terng-Jou Wan
Agriculture 2026, 16(2), 265; https://doi.org/10.3390/agriculture16020265 - 21 Jan 2026
Viewed by 128
Abstract
Aeroponics has emerged as a key technology for sustainable and resource-efficient food production, particularly under intensifying constraints on water availability, land use, and greenhouse gas (GHG) emissions. This review synthesizes recent advances in water–energy–nutrient integration, highlighting operational parameters—humidity (50–80%), temperature (18–25 °C), nutrient [...] Read more.
Aeroponics has emerged as a key technology for sustainable and resource-efficient food production, particularly under intensifying constraints on water availability, land use, and greenhouse gas (GHG) emissions. This review synthesizes recent advances in water–energy–nutrient integration, highlighting operational parameters—humidity (50–80%), temperature (18–25 °C), nutrient solution pH (5.5–6.5), and electrical conductivity (1.5–2.5 mS cm−1)—that critically influence system performance. Evidence indicates that closed-loop water recirculation and AI-assisted monitoring for environmental control and nutrient dosing can stabilize system dynamics and reduce water consumption by more than 90%. Reported yield improvements ranged from 45% to 75% compared with conventional soil-based cultivation. Moreover, systems powered by renewable energy demonstrated up to an 80% reduction in GHG emissions. Life-cycle assessment studies further suggest that aeroponics, coupled with low-carbon electricity in controlled-environment agriculture (CEA), can outperform traditional agricultural supply chains in climate and resource efficiency metrics. Additional technological innovations—including multi-tier vertical rack architectures, optimized misting intervals, and micronutrient-enriched fertigation formulations containing N, P, Ca, Mg, and K—were found to enhance spatial productivity and crop quality. Overall, aeroponics represents a promising pathway toward net-zero, high-performance agricultural systems. Full article
(This article belongs to the Section Agricultural Systems and Management)
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24 pages, 2819 KB  
Article
Long-Term Organic Fertilization Enhances Soil Fertility and Reshapes Microbial Community Structure with Decreasing Effects Across Soil Depth
by Suyao Li, Yulin Li, Xu Yan, Zhengyang Gu, Dong Xue, Kaihua Wang, Yuting Yang, Min Lv, Yujie Han, Jinbiao Li, Yanyan Lv and Anyong Hu
Microorganisms 2026, 14(1), 250; https://doi.org/10.3390/microorganisms14010250 - 21 Jan 2026
Viewed by 142
Abstract
Sustaining agricultural productivity and soil health under intensive cultivation requires a comprehensive understanding of fertilization effects, particularly on deeper soil layers, which has received limited attention compared to surface soils. This study investigated how different fertilization regimes (inorganic, organic, and combined organic–inorganic fertilizers) [...] Read more.
Sustaining agricultural productivity and soil health under intensive cultivation requires a comprehensive understanding of fertilization effects, particularly on deeper soil layers, which has received limited attention compared to surface soils. This study investigated how different fertilization regimes (inorganic, organic, and combined organic–inorganic fertilizers) influence soil physicochemical properties, microbial diversity, community structure, and functional gene abundances at three soil depths (0–20 cm, 20–40 cm, and 40–60 cm) in a 40-year fertilization experiment. Organic fertilization significantly improved topsoil fertility indicators such as soil organic matter (56.6–109.2%), total nitrogen (66.7–122.0%), total phosphorus (198.6–413.2%), and available phosphorus (984.8–1622.1%) and potassium (35.3–438.1%). Compared with the unfertilized control and nitrogen-only treatment, rice yield increased by 97.1–130.5% under NPK and sole organic fertilization, and further increased by 184.1–255.9% under combined organic–inorganic fertilization. However, fertilization effects diminished with soil depth due to limited nutrient mobility. Microbial diversity significantly decreased with depth and was minimally influenced by fertilization treatments. Microbial community structure varied notably among fertilization treatments at the surface layer, mainly driven by soil nutrients, whereas soil depth had a dominant effect on microbial community structure and compositions. Co-occurrence networks showed the highest complexity in surface soil microbial communities, which declined with soil depth, reflecting potential synergistic and mutualistic relationships in topsoil and the adaptation of microbial communities to nutrient-limited conditions in subsoil. Microbial functional gene analyses highlighted clear depth-dependent distributions, with surface layers enriched in decomposition-related genes, while deeper layers favored anaerobic processes. Overall, long-term fertilization exerted strong depth-dependent effects on soil fertility, microbial community structure, and functional potential in paddy soils. Full article
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20 pages, 20102 KB  
Article
Influence of Alpine Forest Types on Soil Microbial Diversity and Soil Quality
by Shuang Ji, Xunxun Qiu, Huichun Xie, Zhiqiang Dong and Hongye Li
Plants 2026, 15(2), 315; https://doi.org/10.3390/plants15020315 - 21 Jan 2026
Viewed by 148
Abstract
Alpine forests are key regulators of soil biogeochemical cycles, yet the extent to which forest type constrains soil microbial diversity and soil quality in high-elevation regions remains insufficiently resolved. Here, we assessed how contrasting alpine forest types influence the taxonomic composition and diversity [...] Read more.
Alpine forests are key regulators of soil biogeochemical cycles, yet the extent to which forest type constrains soil microbial diversity and soil quality in high-elevation regions remains insufficiently resolved. Here, we assessed how contrasting alpine forest types influence the taxonomic composition and diversity of soil microbial communities, identified the dominant environmental drivers, and evaluated soil quality along the southern slope of the Qilian Mountains. Six forest types were examined, including four monospecific stands (Picea crassifolia, QQ; Betula spp., HS; Juniperus przewalskii, YB; and Pinus tabuliformis, YS) and two mixed formations (mixed conifer–broadleaf, ZKHJ; and mixed broadleaved, KKHJ). Bacterial and fungal communities were characterized using Illumina high-throughput sequencing, while structural equation modeling (SEM) was used to identify primary drivers of diversity and principal component analysis (PCA) was applied to construct the minimum data set (MDS) for soil quality evaluation. Mixed forests consistently exhibited higher bacterial and fungal alpha diversity than pure stands. Environmental gradients were the strongest positive drivers of microbial diversity, whereas soil chemical properties and vegetation-related biotic factors exerted partially negative effects. Soil quality index (SQI) values ranked as follows: KKHJ (0.55) > ZKHJ (0.49) > YB (0.48) > HS (0.46) > YS (0.44) > QQ (0.43). The mixed broadleaved forest reached Grade IV (upper-intermediate level) soil quality, whereas the other forest types were classified as Grade III (intermediate). Mixed forests showed stronger capacities for organic matter accumulation and nutrient retention. These findings indicate that promoting mixed forest stands is critical for improving soil structure, nutrient retention, and microbial diversity in this alpine region. Accordingly, forest management should prioritize the development of mixed forests to enhance overall soil quality. Full article
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13 pages, 59409 KB  
Article
Water Quality and Sediment Microbial Community Differences Between Sea Urchin Monoculture and Sea Urchin–Shrimp IMTA Systems
by Cuicui Wang, Yongyao Guo, Xinli Gu, Nshimiyimana Elisee, Bingbing Jiang and Bo Zhao
Water 2026, 18(2), 268; https://doi.org/10.3390/w18020268 - 21 Jan 2026
Viewed by 167
Abstract
Integrated multi-trophic aquaculture (IMTA) has emerged as an ecological intensification strategy capable of enhancing nutrient utilization and improving environmental stability in mariculture systems, yet the microbial mechanisms driving nutrient transformations remain insufficiently understood. This study investigated how culture mode (IMTA vs. monoculture) shape [...] Read more.
Integrated multi-trophic aquaculture (IMTA) has emerged as an ecological intensification strategy capable of enhancing nutrient utilization and improving environmental stability in mariculture systems, yet the microbial mechanisms driving nutrient transformations remain insufficiently understood. This study investigated how culture mode (IMTA vs. monoculture) shape water quality, sediment microbial communities, and nutrient cycling processes in a shrimp–sea urchin system by combining water-quality monitoring, nutrient analysis, 16S rRNA high-throughput sequencing, and redundancy analysis. IMTA significantly increased turbidity, chlorophyll-a, phosphate, ammonium, and nitrite compared with monoculture, while physico-chemical parameters remained stable. Sediment microbiota in IMTA exhibited substantially higher alpha diversity and showed a clear compositional separation from monoculture communities. At the genus level, IMTA sediments were enriched in Vibrio, Motilimonas, and Ruegeria, distinguishing them from monoculture systems. At the phylum level, IMTA was characterized by increased abundances of Proteobacteria and Bacteroidota, accompanied by a marked decline in Spirochaetota. Functional predictions indicated that microbial communities were predominantly characterized by pathways related to amino acid and carbohydrate metabolism, as well as nutrient remineralization. RDA and correlation analyses further identified turbidity, chlorophyll-a, phosphate, ammonium, and nitrite as the principal drivers of microbial divergence. Overall, the findings demonstrate that IMTA reshapes sediment microbial communities toward more efficient nutrient-processing assemblages, thereby promoting active nitrogen and phosphorus transformations and improving biogeochemical functioning relative to monoculture. These results provide mechanistic insight into how IMTA supports nutrient recycling and environmental sustainability in modern mariculture systems. Full article
(This article belongs to the Section Water, Agriculture and Aquaculture)
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17 pages, 1093 KB  
Article
Boron Toxicity Alters Yield, Mineral Nutrition and Metabolism in Tomato Plants: Limited Mitigation by a Laminaria digitata-Derived Biostimulant
by Valeria Navarro-Perez, Erika Fernandez-Martinez, Francisco García-Sánchez, Silvia Simón-Grao and Vicente Gimeno-Nieves
Agronomy 2026, 16(2), 247; https://doi.org/10.3390/agronomy16020247 - 20 Jan 2026
Viewed by 111
Abstract
The use of unconventional water sources, such as those from marine desalination plants, is challenging for agriculture due to boron concentrations exceeding 0.5 mg L−1, which can impact crop yield and quality. To ensure sustainability, it is crucial to understand crop [...] Read more.
The use of unconventional water sources, such as those from marine desalination plants, is challenging for agriculture due to boron concentrations exceeding 0.5 mg L−1, which can impact crop yield and quality. To ensure sustainability, it is crucial to understand crop responses to high boron levels and to develop strategies to mitigate its toxic effects. This study evaluated the impact of irrigation with a nutrient solution containing 15 mg L−1 of boron on tomato plants (Solanum lycopersicum L.). To modulate the physiological effects of boron toxicity, two biostimulant products based on an extract from the brown alga Laminaria digitata and other active ingredients were applied foliarly. Agronomic, nutritional, and metabolic parameters were analyzed, including total yield, number of fruits per plant, and fruit quality. Additionally, mineral analysis and metabolomic profiling of leaves and fruits were performed, focusing on amino acids, organic acids, sugars, and other metabolites. A control treatment was irrigated with a nutrient solution containing 0.25 mg L−1 of boron. The results showed that a boron concentration of 15 mg L−1 significantly reduced total yield by 45% and significantly decreased fruit size and firmness. Mineral and metabolomic analyses showed significant reductions in Mg and Ca concentrations, significant increases in P and Zn levels, excessive boron accumulation in leaves and fruits, and significant changes in metabolites associated with nitrogen metabolism and the Krebs cycle. Biostimulant application did not significantly improve agronomic performance, likely due to high boron accumulation in the leaves, although significant changes were detected in leaf nutritional status and metabolic profiles. Full article
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18 pages, 1682 KB  
Article
Consequential Life Cycle Assessment of Integrated Anaerobic Digestion–Pyrolysis–HTC Systems for Bioenergy and Biofertiliser from Cattle Slurry and Grass Silage
by Maneesh Kumar Mediboyina, Nishtha Talwar and Fionnuala Murphy
Sustainability 2026, 18(2), 1040; https://doi.org/10.3390/su18021040 - 20 Jan 2026
Viewed by 136
Abstract
This study evaluates the environmental outcomes of integrating anaerobic digestion (AD) with pyrolysis (Py) and hydrothermal carbonization (HTC) to treat cattle slurry and grass silage in an Irish agricultural context. A consequential life cycle assessment (CLCA) was carried out for six scenarios based [...] Read more.
This study evaluates the environmental outcomes of integrating anaerobic digestion (AD) with pyrolysis (Py) and hydrothermal carbonization (HTC) to treat cattle slurry and grass silage in an Irish agricultural context. A consequential life cycle assessment (CLCA) was carried out for six scenarios based on 1 t of feedstock (0.4:0.6 cattle slurry/grass silage on a VS basis): two standalone AD systems (producing bioelectricity and biomethane) and four integrated AD–Py/HTC systems with different product utilisation pathways. Across all impact categories, the integrated systems performed better than standalone AD. This improvement is mainly due to the surplus bioenergy (electricity, biomethane, hydrocarbon fuel, hydrochar) that replaces marginal fossil energy (hard coal, natural gas and heavy fuel oil), together with the displacement of mineral NPK fertilisers by digestate-derived biochar and HTC process water. Among the configurations, the AD–HTC bioelectricity scenario (S4) achieved the best overall performance, driven by higher hydrochar yields, a favourable heating value, and a lower pretreatment energy demand compared with Py-based options. Across the integrated scenarios, climate change, freshwater eutrophication, and fossil depletion impacts were reduced by up to 84%, 86%, and 99%, respectively, relative to the fossil-based reference system, while avoiding digestate and fertiliser application reduced terrestrial acidification by up to 74%. Overall, the results show that the cascading utilisation of digestate via AD–Py/HTC can simultaneously enhance bioenergy production and nutrient recycling, providing a robust pathway for low-emission management of agricultural residues. These findings are directly relevant to Ireland’s renewable energy and circular economy targets and are transferable to other livestock-intensive regions seeking to valorise slurry and grass-based residues as low-carbon energy and biofertiliser resources. Full article
(This article belongs to the Special Issue Sustainable Waste Utilisation and Biomass Energy Production)
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19 pages, 6699 KB  
Article
GCOM-C/SGLI-Based Optical-Water-Type Classification with Emphasis on Discriminating Phytoplankton Bloom Types
by Eko Siswanto
Remote Sens. 2026, 18(2), 334; https://doi.org/10.3390/rs18020334 - 19 Jan 2026
Viewed by 160
Abstract
Classifying optical water types (OWTs), particularly concerning different phytoplankton bloom types, is critically important because dominant phytoplankton groups govern key marine ecosystem functions and biogeochemical processes, including nutrient cycling and carbon export. This study refines a recent OWT classification method developed for the [...] Read more.
Classifying optical water types (OWTs), particularly concerning different phytoplankton bloom types, is critically important because dominant phytoplankton groups govern key marine ecosystem functions and biogeochemical processes, including nutrient cycling and carbon export. This study refines a recent OWT classification method developed for the Second-Generation Global Imager (SGLI), which was originally proposed to discriminate dinoflagellate and diatom blooms. By employing binary logistic regression (bLR) with independent in situ data from Karenia selliformis (dinoflagellate) blooms off the Kamchatka Peninsula and Skeletonema spp. (diatom) blooms in Tokyo Bay, this study establishes more robust and statistically meaningful boundaries between OWTs. The analysis confirms the diagnostic spectral shapes from SGLI data: a trough at 490 nm for K. selliformis blooms and a peak at 490 nm for diatom blooms, validating the consistency of this spectral criterion. The updated method reliably identifies waters dominated by coloured dissolved organic matter and different phytoplankton functional types in mesotrophic waters, and successfully detected a Karenia mikimotoi bloom in the Gulf St. Vincent, South Australia, demonstrating its potential for the global monitoring of red tides. By providing a reliable, satellite-based tool to distinguish between ecologically distinct phytoplankton groups, this refined OWT classification offers a valuable data product to improve the accuracy of marine ecosystem and carbon cycle models, moving beyond bulk chlorophyll-a parameterizations. Full article
(This article belongs to the Special Issue Recent Advances in Water Quality Monitoring)
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Review
Organic Amendments for Sustainable Agriculture: Effects on Soil Function, Crop Productivity and Carbon Sequestration Under Variable Contexts
by Oluwatoyosi O. Oyebiyi, Antonio Laezza, Md Muzammal Hoque, Sounilan Thammavongsa, Meng Li, Sophia Tsipas, Anastasios J. Tasiopoulos, Antonio Scopa and Marios Drosos
C 2026, 12(1), 7; https://doi.org/10.3390/c12010007 - 19 Jan 2026
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Abstract
Soil amendments play a critical role in improving soil health and supporting sustainable crop production, especially under declining soil fertility and climate-related stress. However, their impact varies because each amendment influences the soil through different biogeochemical processes rather than a single universal mechanism. [...] Read more.
Soil amendments play a critical role in improving soil health and supporting sustainable crop production, especially under declining soil fertility and climate-related stress. However, their impact varies because each amendment influences the soil through different biogeochemical processes rather than a single universal mechanism. This review synthesizes current knowledge on a wide range of soil amendments, including compost, biosolids, green and animal manure, biochar, hydrochar, bagasse, humic substances, algae extracts, chitosan, and newer engineered options such as metal–organic framework (MOF) composites, highlighting their underlying principles, modes of action, and contributions to soil function, crop productivity, and soil carbon dynamics. Across the literature, three main themes emerge: improvement of soil physicochemical properties, enhancement of nutrient cycling and nutrient-use efficiency, and reinforcement of plant resilience to biotic and abiotic stresses. Organic nutrient-based amendments mainly enrich the soil and build organic matter, influencing soil carbon inputs and short- to medium-term increases in soil organic carbon stocks. Biochar, hydrochar, and related materials act mainly as soil conditioners that improve structure, water retention, and soil function. Biostimulant-type amendments, such as algae extracts and chitosan, influence plant physiological responses and stress tolerance. Humic substances exhibit multifunctional effects at the soil–root interface, contributing to improved nutrient efficiency and, in some systems, enhanced carbon retention. The review highlights that no single amendment is universally superior, with outcomes governed by soil–crop context. Its novelty lies in its mechanism-based, cross-amendment synthesis that frames both yield and carbon outcomes as context-dependent rather than universally transferable. Within this framework, humic substances and carbon-rich materials show potential for climate-smart soil management, but long-term carbon sequestration effects remain uncertain and context-dependent. Full article
(This article belongs to the Section Carbon Cycle, Capture and Storage)
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