Soil Health and Plant Microbiome–Bioeffectors Relationship in Sustainable Agriculture, 2nd Edition

A special issue of Microorganisms (ISSN 2076-2607). This special issue belongs to the section "Plant Microbe Interactions".

Deadline for manuscript submissions: 31 December 2025

Special Issue Editors


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Guest Editor
Department of Microbiology and Environmental Biotechnologies, Faculty of Plant Protection and Agroecology, Agricultural University – Plovdiv, 4000 Plovdiv, Bulgaria
Interests: soil microbiology; plant growth-promoting bacteria (PGPB); phytoremediation; biowaste composting and recycling
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Guest Editor
Department of Chemical Engineering, and Institute of Biotechnology, Faculty of Sciences, University of Granada, c/Fuentenueva s/n, E-18071 Granada, Spain
Interests: industrial microbiology; bioreactors and fermentation processes; cell and enzyme immobilization; biotechnological production of enzymes, organic acids, biofuels; plant microbiome; plant-microbial interactions; microbial mineral dissolution; production and formulation of soil inoculants
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Sustainable agriculture strives to meet the nutritional needs of the human population, combining this aspiration with the recovery and maintenance of soil fertility, natural resources, and environmental protection. Microbial communities are essential in managing plant and soil health to obtain increased crop yields with good quality. Microorganisms distributed in the rhizosphere, in plant tissues or on their surface, are prominently "selected" by the plants themselves through the habitat’s characteristics. The progress in agricultural practices and circular bioeconomy achieved in recent years, such as no-till, intermediate, and cover crops, green manure, soil organic amendments, crop rotations, and so on, also model the highly diverse microbial communities. Undoubtedly, the role of these communities is crucial, and in some cases decisive, for plant and soil health, crop resistance, and the mitigation of abiotic and biotic stressors, and thus also for the quantity and quality of crop production. In this regard, the focus of the present Special Issue of Microorganisms is the plant-associated microbiome as an essential piece of the puzzle named sustainable agriculture. The scope is broad and unrestrictive, referring to rhizosphere microbial communities, endophytes, etc. We aim to bring together and showcase original, novel studies and reviews on the plant-associated microbiome in sustainable agriculture. Studies on the beneficial microorganisms in sustainable agriculture are more than welcome.

Prof. Dr. Nikolay Bojkov Vassilev
Dr. Stefan Shilev
Guest Editors

Dr. Stefan Shilev
Prof. Dr. Nikolay Vassilev
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Microorganisms is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • plant-associated microbiome
  • plant–microbiome bioeffectors
  • microbial diversity
  • soil health
  • sustainable agriculture
  • circular bioeconomy

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Published Papers

This special issue is now open for submission.
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