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Keywords = Clarias gariepinus

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48 pages, 3868 KB  
Article
Effect of Hot-Air Drying Temperature on the Physicochemical, Functional, Compositional, and Structural Properties of Catfish (Clarias macrocephalus × C. gariepinus) Powder
by Narin Charoenphun, Zhaojun Ban, Paramee Noonim, Somwang Lekjing, Thanamat Paongoen and Karthikeyan Venkatachalam
Foods 2026, 15(14), 2443; https://doi.org/10.3390/foods15142443 - 9 Jul 2026
Viewed by 399
Abstract
Catfish (Clarias macrocephalus × C. gariepinus) is economically important but perishable, and hot-air drying yields shelf-stable catfish powder (CFP); however, its quality response to high-temperature drying (>100 °C) remains poorly understood. The present study aimed to examine the effects of five [...] Read more.
Catfish (Clarias macrocephalus × C. gariepinus) is economically important but perishable, and hot-air drying yields shelf-stable catfish powder (CFP); however, its quality response to high-temperature drying (>100 °C) remains poorly understood. The present study aimed to examine the effects of five drying temperatures (60–180 °C) on the physicochemical, nutritional, functional, structural, volatile, oxidative, and microbiological properties of CFP. Drying exerted parameter-specific effects. Moisture and water activity fell from 6.24% to 4.75% and 0.42 to 0.23, with microbial counts reduced at ≥120 °C. Browning raised lightness, redness, and yellowness from 49.53 to 57.64, 1.94 to 2.97, and 13.95 to 18.14, respectively. Protein concentrated from 57.63% to 62.24%, whereas oxidation lowered fat from 22.49% to 17.17%. Minerals rose marginally, although iron and zinc declined. Amino acids were largely preserved, though methionine (2.71 to 2.21 g/100 g protein) and cysteine declined and glycine and proline increased. DHA declined most, from 4.61% to 3.20%, followed by EPA and AA. Water holding, oil holding, wettability, dispersibility, and colloidal stability decreased, whereas emulsion stability decreased from 57.14% at 60 °C to 42.10% at 180 °C. Zeta potential became less negative (−35.82 to −20.74 mV), with larger particle size and polydispersity. Among 72 volatiles across 11 classes, 60–90 °C favored fishy aldehydes and 2-pentyl furan and ≥150 °C generated Maillard and sulfur compounds, whereas 120 °C produced the most balanced volatile profile, with lower relative abundance of fishy aldehydes than at 60–90 °C, consistent with the intermediate TBARS values and comparatively better retention of unsaturated fatty acids at this temperature, and limited accumulation of Maillard-derived and sulfur compounds relative to 150–180 °C. FTIR, XRD, TGA, and SEM confirmed preserved structure. Overall, the results showed that 120 °C provided the best balance of dehydration, nutrient and functional retention, flavor, and microbial safety. Full article
(This article belongs to the Section Foods of Marine Origin)
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27 pages, 1900 KB  
Article
Bioaccumulation and Human Health Risk Assessment of Potentially Toxic Elements in Commercial Fish Species (Oreochromis niloticus, Clarias gariepinus, Mugil cephalus) from Slaughterhouse Wastewater-Impacted Rivers in Nigeria
by Onyedikachi Uchechi Bliss, Edene Osemudiamen Anao, Paul Promise Chibuike, Ugorji Chizoba Agatha, Peter Chinedu Agu and Emmanuel Anuoluwapo Oke
Int. J. Environ. Res. Public Health 2026, 23(7), 827; https://doi.org/10.3390/ijerph23070827 - 23 Jun 2026
Viewed by 458
Abstract
Slaughterhouse wastewater introduces potentially toxic elements into aquatic ecosystems, yet bioaccumulation patterns in commercial fish species and associated human health risks remain underexplored in West Africa. This study quantified zinc (Zn), lead (Pb), iron (Fe), magnesium (Mg), chromium (Cr), and cadmium (Cd) in [...] Read more.
Slaughterhouse wastewater introduces potentially toxic elements into aquatic ecosystems, yet bioaccumulation patterns in commercial fish species and associated human health risks remain underexplored in West Africa. This study quantified zinc (Zn), lead (Pb), iron (Fe), magnesium (Mg), chromium (Cr), and cadmium (Cd) in three ecologically distinct fish species—Oreochromis niloticus (Nile tilapia), Clarias gariepinus (African sharptooth catfish), and Mugil cephalus (Flathead grey mullet)—from two slaughterhouse-impacted rivers (Transamadi and Mgbuosimini) and a control site (Iwofe) in Rivers State, Nigeria. Metal concentrations were measured using atomic absorption spectrophotometry. Two-way ANOVA assessed species and location effects. Principal component analysis (PCA) was performed, with Mg used as a potential geogenic tracer, as its loading pattern was independent of Pb and Cd and consistent with the natural background. A Water Quality Index (WQI) classified Mgboshimini and Iwofe as having poor water quality (WQI > 75), while Transamadi had medium quality. Health risks were evaluated using estimated daily intake (EDI), target hazard quotients (THQ), and hazard indices (HI) following USEPA guidelines. Metal levels varied significantly by species and location (p < 0.001). Flathead grey mullet from Mgbuosimini had the highest Pb (1.50 ± 0.05 mg/kg) and Cd (0.41 ± 0.02 mg/kg), exceeding EU maximum levels for fish muscle (Pb 0.30 mg/kg, Cd 0.05 mg/kg) by 500% and 800%, respectively. PCA explained 77.5% of the variance, with Pb and Cd clustering as anthropogenic sources, while Mg loaded independently. THQ for Pb approached unity in Flathead grey mullet (0.88), and THQ for Cd reached 0.97. HI exceeded 1.0 in all species from Mgbuosimini, peaking at 2.07 in Flathead grey mullet. Uncertainty analysis (using ±SD) gave a HI range of 1.89–2.25 for this species, all above the safety threshold. Carcinogenic risk for Flathead grey mullet (3.97 × 10−4) approached the upper acceptable limit. Slaughterhouse effluent appears to elevate Pb and Cd burdens in fish, with detritivorous Flathead grey mullet posing the highest health risk. Exceedance of safety thresholds and HI > 1.0 indicate potential non-carcinogenic and carcinogenic risks. We recommend improved wastewater treatment and species-specific consumption advisories. Full article
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21 pages, 1924 KB  
Article
Assessing the Depletion Status and Sustainability of Catfish (Clarias gariepinus) Fisheries in the Southeast Arm of Lake Malawi
by Francisco Chamera, Mphatso Kamndaya, Solomon Kadaleka, Patrick Phepa, Peter Mpasho Mwamtobe and Alpha Omega Soko
Sustainability 2026, 18(9), 4240; https://doi.org/10.3390/su18094240 - 24 Apr 2026
Viewed by 567
Abstract
Catfish is a major commercial and subsistence species in Malawi, making its sustainability vital for local livelihoods and food security. However, limited evidence exists on the long-term biological and economic depletion of commercial catfish stocks. This study assessed the depletion status of the [...] Read more.
Catfish is a major commercial and subsistence species in Malawi, making its sustainability vital for local livelihoods and food security. However, limited evidence exists on the long-term biological and economic depletion of commercial catfish stocks. This study assessed the depletion status of the catfish fishery in the southeast arm of Lake Malawi using secondary catch and effort data from 2000 to 2023 obtained from the Malawi Department of Fisheries, and price and cost data obtained from the field study. Applying the bioeconomic Gordon–Schaefer model, the study estimated biological depletion and economic depreciation to quantify resource losses and evaluate the fishery’s sustainability. Constant and periodic harvesting strategies were examined to determine sustainable harvest thresholds. Results show that depletion occurred in 15 of the 24 years analysed, with a cumulative biomass loss of 446.1 tonnes and an estimated total depreciation of about MK 1.5 billion. These findings indicate exploitation beyond sustainable levels both biologically and economically, threatening stock recovery, long-term productivity, and economic viability. The study highlights the value of bioeconomic modelling in fishery assessment and underscores the urgent need for improved management, including strengthened monitoring, effort regulation, and enhanced enforcement, to ensure sustainable utilisation of catfish resources and protect dependent livelihoods. Full article
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18 pages, 938 KB  
Article
Spatial Land Use Dynamics Driving Molecular Stress and Unacceptable Human Health Risks in Standardized Catfish Aquaculture Systems
by Ukam Uno, Worapong Singchat, Thitipong Panthum, Aingorn Chaiyes, Ekerette Ekerette, Uduak Edem, Saharuetai Jeamsripong, Anurak Uchuwittayakul, Weekit Sirisaksoontorn, Chomdao Sinthuvanich and Kornsorn Srikulnath
Environments 2026, 13(4), 231; https://doi.org/10.3390/environments13040231 - 21 Apr 2026
Viewed by 1299
Abstract
Aquaculture sustainability in rapidly urbanizing regions is increasingly threatened by heavy metal contamination originating from complex anthropogenic land-use patterns. This study used an integrated model to evaluate the molecular-to-human health continuum in hybrid catfish (Clarias gariepinus × Clarias macrocephalus) sourced from [...] Read more.
Aquaculture sustainability in rapidly urbanizing regions is increasingly threatened by heavy metal contamination originating from complex anthropogenic land-use patterns. This study used an integrated model to evaluate the molecular-to-human health continuum in hybrid catfish (Clarias gariepinus × Clarias macrocephalus) sourced from Pathum Thani, Thailand’s primary aquaculture hub. We integrated geospatial land-use data with heavy-metal quantification, oxidative-stress biomarkers, and transcriptional profiling to assess how canal-specific water quality modulates fish health and consumer risk. The results revealed significant spatial heterogeneity in metal concentrations, corresponding to the province’s 27% urban–industrial land-use footprint. While water quality generally met regulatory limits, a pronounced aqueous–biotic discrepancy, “bioaccumulation paradox” was identified at certain sites, where muscle and hepatic tissues exhibited lead (Pb), chromium (Cr), and nickel (Ni) levels that substantially exceeded international safety standards. Biochemical and molecular analyses provided functional evidence of physiological distress, specifically significantly elevated malondialdehyde (MDA) levels, and the transcriptional modulation of cat, cyp1a, gpx, met, tnf, and star genes indicated that chronic metal exposure overwhelmed antioxidant defenses and induced potential endocrine disruption. Moreover, human health risk assessments revealed that the hazard index (HI) and target cancer risk (TR) exceeded unacceptable thresholds at multiple hotspots, indicating that Cr is a primary carcinogenic driver. These findings highlight a “GAP Paradox,” where farm-level certifications are insufficient to mitigate risks posed by the surrounding canal network. This study presents vital evidence-based risk profiles that necessitate a transition to a spatially based regulatory framework, incorporating geospatial land-use monitoring into national food safety policies to protect both aquaculture viability and public health. Full article
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23 pages, 1544 KB  
Article
Reproductive Performance of Male African Catfish (Clarias gariepinus) Breeders Under Varying Hormone Preparations and Doses Under Controlled Conditions
by Joshua L. Superio, Hasmin F. Villanueva, Frenz Charish B. Hechanova, Kenaz Barnie P. Cejar, Fiona L. Pedroso and Casiano H. Choresca
Fishes 2026, 11(4), 208; https://doi.org/10.3390/fishes11040208 - 1 Apr 2026
Viewed by 1905
Abstract
The African catfish (Clarias gariepinus) is an important aquaculture species in the Philippines, but it exhibits reproductive dysfunctions in captivity due to the absence of natural spawning cues and culture-induced stress. In hatcheries, sperm collection often requires sacrificing male breeders, limiting [...] Read more.
The African catfish (Clarias gariepinus) is an important aquaculture species in the Philippines, but it exhibits reproductive dysfunctions in captivity due to the absence of natural spawning cues and culture-induced stress. In hatcheries, sperm collection often requires sacrificing male breeders, limiting breeding program applications, and threatening genetic diversity. This study evaluated and optimized hormonal induction protocols to enhance spermiation and fertilization success in male C. gariepinus. Two experimental trials were conducted under controlled hatchery conditions. In Trial 1, human chorionic gonadotropin combined with a dopamine antagonist (hCG + DA; 5000 IU·kg−1 BW + 5 mg·kg−1 BW) and Ovaprim (1.0 mL·kg−1 BW) significantly increased circulating testosterone and estradiol levels, spermiation index, and fertilization outcomes (embryo viability, hatching, and larval survival). In Trial 2, medium to low doses of hCG + DA (3000–5000 IU·kg−1 BW + 5 mg·kg−1 BW) and Ovaprim (0.75–1.0 mL·kg−1 BW) yielded the best performance in terms of hormone levels, spermiation index, and fertilizing capabilities. The presence of a dopamine antagonist (DA) likely contributed to the efficacy of the treatments, since dopamine suppresses the secretion of gonadotropin-releasing hormone (dopaminergic inhibition), and DA counteracts this effect, increasing LH and FSH levels necessary for gametogenesis. Taken together, these results highlight the potential of optimized hormonal protocols to mitigate reproductive dysfunctions in male C. gariepinus in aquaculture settings. Further studies should refine dose combinations, assess the long-term health of broodstock, and evaluate cost-effectiveness to support sustainable broodstock management and genetic conservation. Full article
(This article belongs to the Section Physiology and Biochemistry)
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17 pages, 7639 KB  
Article
Absence of Toll-like Receptor 21 (TLR21) Gene in the Genome of Transparent Glass Catfish (Kryptopterus vitreolus)
by Shengtao Guo, Xinhui Zhang, Rusong Zhang, Kai Zhang, Jianchao Chen, Yunyun Lv, Zhengyong Wen, Jieming Chen, Chao Bian and Qiong Shi
Biology 2026, 15(3), 263; https://doi.org/10.3390/biology15030263 - 1 Feb 2026
Viewed by 717
Abstract
This study investigates the genomic basis of immune adaptation in the transparent glass catfish (Kv: Kryptopterus vitreolus), focusing on the loss of the Toll-like receptor 21 (TLR21) gene. Comparative genomic analysis with closely related non-transparent North African catfish [...] Read more.
This study investigates the genomic basis of immune adaptation in the transparent glass catfish (Kv: Kryptopterus vitreolus), focusing on the loss of the Toll-like receptor 21 (TLR21) gene. Comparative genomic analysis with closely related non-transparent North African catfish (Cg: Clarias gariepinus) revealed 11 TLR genes in the latter, while only 8 TLR genes (KvTLR1, 2, 3, 5, 7, 9, 13, and 20) were retained in the glass catfish, with TLR21 specifically absent. Collinearity analysis confirmed that the genomic region containing TLR21 is conserved across eight siluriform species, with loss exclusively in the glass catfish, supporting its lineage-specific absence. Structural expansion was notable in KvTLR5, KvTLR7, and KvTLR20. Molecular docking indicated that binding stability between CpG oligonucleotides and TLR21 varies significantly, with CpG-B 1681 showing the strongest interaction, which highlights sequence-dependent ligand recognition. Interestingly, absence of the TLR1 gene in another transparent teleost, the X-ray tetra (Pristella maxillaris), suggests that transparent fishes may share an evolutionary trend of lineage-specific TLR gene loss. Together, these findings reveal a distinctive evolutionary trajectory in the innate immune receptor family of transparent fishes and provide new molecular insights into their adaptive immune strategies. These insights will benefit the academic community by improving comparative frameworks for fish innate immunity, and they may inform disease prevention and health management strategies in aquaculture and the ornamental fish trade. Full article
(This article belongs to the Special Issue Research Advances in Aquatic Omics)
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14 pages, 1089 KB  
Article
Comparative Performance of Lettuce (Lactuca sativa) in a Coupled Aquaponic System Using Nile Tilapia (Oreochromis niloticus) and African Catfish (Clarias gariepinus) Under Tropical Conditions
by Cassius Aruho, Nasser Kasozi, Gertrude Atukunda, Papius Dias Tibihika, Margaret Aanyu, Barry Kamira, Godfrey Byaruhanga, Everlyne Ajore, Gabriel Ddamulira and Idd Ramathani
Horticulturae 2026, 12(2), 175; https://doi.org/10.3390/horticulturae12020175 - 31 Jan 2026
Cited by 1 | Viewed by 1700
Abstract
This study evaluated the performance of lettuce (Lactuca sativa) cultivated in coupled aquaponic systems integrated with Nile tilapia (Oreochromis niloticus) and African catfish (Clarias gariepinus) under tropical greenhouse conditions. The experiment was conducted across two consecutive lettuce [...] Read more.
This study evaluated the performance of lettuce (Lactuca sativa) cultivated in coupled aquaponic systems integrated with Nile tilapia (Oreochromis niloticus) and African catfish (Clarias gariepinus) under tropical greenhouse conditions. The experiment was conducted across two consecutive lettuce production cycles to assess fish growth, plant performance, water quality, and nutrient dynamics. African catfish exhibited significantly higher specific growth rates (1.08 ± 0.18%/day; p = 0.02) and weight gain (92.38 ± 22.29%; p = 0.03) compared with tilapia. During the first lettuce cycle, tilapia-based systems yielded significantly higher final plant weights (177.6 ± 34.4 g/plant; p = 0.0002), and greater increases in leaf number, weight gain, and absolute growth rate than catfish-based systems. However, in the second cycle, catfish systems resulted in superior lettuce leaf morphology, with significantly greater leaf length, width, and total leaf area. Nutrient profiles differed markedly between systems. In the deep-water culture (DWC) units, total phosphorus (TP) concentrations were significantly higher in the tilapia-based system during cycle 1 (12.39 ± 0.64 mg/L; p = 0.0001), while total nitrogen (TN) concentrations were significantly higher in the catfish treatment during cycle 2 (21.54 ± 2.93 mg/L; p = 0.0007). Catfish-based systems also showed higher levels of calcium and sodium. Despite these differences, temperature, pH, and dissolved oxygen remained within optimal ranges for aquaponic production across both systems. Overall, tilapia-based aquaponics promoted faster early-cycle plant growth and higher initial yield, whereas catfish-based systems enhanced nitrogen availability and improved lettuce leaf structural development over successive cycles. These findings indicate that fish species selection plays a critical role in shaping nutrient dynamics and crop performance in tropical aquaponic systems. Full article
(This article belongs to the Special Issue Enhancing Plant Quality and Sustainability in Aquaponics Systems)
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28 pages, 2154 KB  
Article
Towards Zero-Waste Valorization of African Catfish By-Products Through Integrated Biotechnological Processing and Life Cycle Assessment
by Orsolya Bystricky-Berezvai, Miroslava Kovářová, Daniel Kašík, Ondřej Rudolf, Robert Gál, Jana Pavlačková and Pavel Mokrejš
Gels 2026, 12(1), 45; https://doi.org/10.3390/gels12010045 - 1 Jan 2026
Cited by 1 | Viewed by 1626
Abstract
African catfish (Clarias gariepinus, AC) is one of the most widely farmed freshwater fish species in Central Europe. Processing operations generate up to 55% by-products (BPs), predominantly carcasses rich in proteins, lipids, and minerals. This study develops a comprehensive valorization process [...] Read more.
African catfish (Clarias gariepinus, AC) is one of the most widely farmed freshwater fish species in Central Europe. Processing operations generate up to 55% by-products (BPs), predominantly carcasses rich in proteins, lipids, and minerals. This study develops a comprehensive valorization process for ACBPs to recover gelatin, protein hydrolysate, fish oil, and pigments. The processing protocol consisted of sequential washing, oil extraction, demineralization, and biotechnological treatment to disrupt the collagen quaternary structure. A two-factor experimental design was employed to optimize the processing conditions. The factors included the extraction temperatures of the first (35–45 °C) and second fraction (50–60 °C). We hypothesized that enzymatic conditioning, combined with sequential hot-water extraction, would yield gelatin with properties comparable to those of mammalian- and fish-derived gelatins, while enabling a near-zero-waste process. The integrated process yielded 18.2 ± 1.2% fish oil, 9.8 ± 2.1% protein hydrolysate, 1.7 ± 0.7% pigment extract, and 25.3–37.8% gelatin. Optimal conditions (35 °C/60 °C) produced gelatin with gel strength of 168.8 ± 3.6 Bloom, dynamic viscosity of 2.48 ± 0.02 mPa·s, and yield of 34.76 ± 1.95%. Life cycle assessment (LCA) identified two primary environmental hotspots: water consumption and energy demand. This near-zero-waste biorefinery demonstrates the potential for comprehensive valorization of aquaculture BPs into multiple value-added bioproducts. Full article
(This article belongs to the Special Issue Advanced Gels in the Food System)
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14 pages, 2235 KB  
Article
The Effects of Acute Aldrin Exposure on the Liver and Kidney of the African Sharptooth Catfish, Clarias gariepinus (Burchell, 1822)
by Helené Johanna Coetzee, Uwineza Marie Clementine Nibamureke, Jamie Das Neves, Irene Ellen Jane Barnhoorn and Gesina Maria Wagenaar
Environments 2025, 12(12), 481; https://doi.org/10.3390/environments12120481 - 9 Dec 2025
Cited by 1 | Viewed by 772
Abstract
Despite being banned since 1992, the organochlorine pesticide aldrin was recently detected in the Albasini Dam in Limpopo Province, South Africa. Aldrin is listed in the initial twelve persistent organic pollutants (POPs) and is rapidly broken down into dieldrin. Therefore, the presence of [...] Read more.
Despite being banned since 1992, the organochlorine pesticide aldrin was recently detected in the Albasini Dam in Limpopo Province, South Africa. Aldrin is listed in the initial twelve persistent organic pollutants (POPs) and is rapidly broken down into dieldrin. Therefore, the presence of aldrin in the Albasini Dam indicates recent exposure and poses an environmental concern. Since 2006, a decline in fish numbers and adverse health effects have been reported in fish from the dam. This study aimed to investigate the potential effects of aldrin on the health of male African sharptooth catfish (Clarias gariepinus) through acute exposure to an environmentally relevant concentration of aldrin (0.14 µg/L) and an increased concentration (1.40 µg/L) under controlled laboratory conditions (28.7 °C; pH 8). The liver and kidney showed histological changes in both organs without significant differences between the groups for the 0.14 µ/L aldrin concentration. However, a significant difference was found in the kidney histological indices between the control fish and fish exposed to the high aldrin concentration (p = 0.014). A significant difference in kidney indices was observed between the two aldrin concentrations (p = 0.001). It was evident that histological changes in the kidney were prevalent and severe in fish exposed to 1.40 µg/L aldrin. This means that the observed levels of aldrin in Albasini Dam water (0.14 µg/L) may not pose a direct danger to the fish liver and kidney; however, as aldrin was banned for use, its presence in the dam is concerning, as at 1.40 µg/L, it may impair fish health. Full article
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17 pages, 2108 KB  
Article
Stock Status and Unsustainable Exploitation Dynamics of Key Commercial Species in the Nile Delta Lakes, Egypt
by Sahar Fahmy Mehanna and Mohamed Samy-Kamal
Fishes 2025, 10(12), 619; https://doi.org/10.3390/fishes10120619 - 3 Dec 2025
Viewed by 760
Abstract
Effective fisheries management relies on accurate stock assessments to ensure sustainable exploitation and long-term ecosystem stability. Fisheries from the Nile Delta lakes of Egypt—comprising Manzala, Burullus, Edku, and Mariout—are economically critical, collectively contributing about 40% of the nation’s total capture fisheries and are [...] Read more.
Effective fisheries management relies on accurate stock assessments to ensure sustainable exploitation and long-term ecosystem stability. Fisheries from the Nile Delta lakes of Egypt—comprising Manzala, Burullus, Edku, and Mariout—are economically critical, collectively contributing about 40% of the nation’s total capture fisheries and are facing severe anthropogenic challenges. This study assessed the stock status of 10 key fish species and two crustacean species from these four Nile Delta lakes by determining their life history parameters and exploitation levels. The analysis included estimation of the Length–Weight Relationship (LWR), von Bertalanffy Growth Function (VBGF) parameters, instantaneous mortality coefficients (Z, M, F), and the exploitation ratio (E). Asymptotic total length (L∞) varied widely, ranging from 10.47 cm for Portunus pelagicus to 86.78 cm for Clarias gariepinus (in Lake Manzala). The growth coefficient (K) spanned from 0.31 yr−1 (C. gariepinus) to 1.79 yr−1 (Metapenaeus stebbingi), reflecting diverse life history strategies. The key finding, based on the Gulland criterion, is that all commercial stocks examined in the Nile Delta lakes are currently subjected to severe overexploitation, with the exploitation ratio (E) consistently exceeding the optimal threshold of 0.5. These results underscore the urgent need for adaptive management strategies, including stricter gear regulations and improved fisheries monitoring, to ensure the sustainability of these vital resources. Full article
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25 pages, 2000 KB  
Perspective
Addressing Catfish (Clarias spp.) Supply Gap in Nigeria: A Perspective on Strategies for Sustainable Aquaculture Growth
by Kornsorn Srikulnath, Thitipong Panthum, Worapong Singchat, Aingorn Chaiyes, Jiraboon Prasanpan, Ukam Uno, Uduak Edem and Jude Ejikeme Obidiegwu
Sustainability 2025, 17(21), 9645; https://doi.org/10.3390/su17219645 - 30 Oct 2025
Cited by 4 | Viewed by 4256
Abstract
Nigeria’s aquaculture sector, which has been dominated by the production of African catfish (Clarias gariepinus), has held considerable potential to improve national food security, support livelihoods, and contribute to economic growth. Although Nigeria has been ranked among the world’s leading producers [...] Read more.
Nigeria’s aquaculture sector, which has been dominated by the production of African catfish (Clarias gariepinus), has held considerable potential to improve national food security, support livelihoods, and contribute to economic growth. Although Nigeria has been ranked among the world’s leading producers of farmed catfish, a persistent fish supply deficit that exceeds 2.5 million metric tons annually has been reported. This gap has been sustained by factors such as low productivity, genetic decline, inadequate hatchery systems, and limited export competitiveness. A comprehensive perspective is presented in this review, in which findings from recent researches, field surveys, and stakeholder consultations have been synthesized. The dominance of hybrid species such as Heteroclarias, which has been driven by consumer demand due to fast growth and large body size, is highlighted. Additionally, ecological and genetic concerns resulting from unregulated breeding are emphasized. Major systemic constraints, which include poor broodstock management, weak hatchery infrastructure, low technical capacity, and poor supply chain governance, have also been identified. A strategic approach involves modernizing fish breeding programs by developing a robust and active Fish Breeding Community of Practice (FCoP), enhancing physical infrastructure, improving data collection and management, standardizing germplasm exchange procedures, and increasing the number and capacity of fish breeders and technicians in breeding programs. Identifying traits preferred by farmers and end-users ensures that fish breeding is demand-driven and inclusive. Building capacity in genomic resources to implement an accurate predictive platform for performance assessment will significantly shorten the breeding cycle and increase the rate of genetic progress. This will be complemented by the adoption of modern aquaculture technologies, such as recirculating aquaculture systems, and the development of institutional frameworks for production, certification, and traceability schemes. Capacity development, which should be promoted through collaboration among academic institutions, industry actors, and government agencies, has been recommended. The alignment of aquaculture expansion with environmental sustainability, improved biosecurity, and habitat protection has been considered critical. By outlining strategies for innovation, investment, and policy reform, this review provides a roadmap through which Nigeria’s catfish industry can be transformed into a globally competitive and sustainable sector. Full article
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18 pages, 1036 KB  
Article
GH1 Gene Polymorphisms Reveal Population-Level Allele Variation in North African (Clarias gariepinus) and Bighead Catfish (Clarias macrocephalus)
by Phonemany Thammachak, Piangjai Chalermwong, Chananya Patta, Wattanawan Jaito, Worapong Singchat, Thitipong Panthum, Trifan Budi, Kednapat Sriphairoj, Sittichai Hatachote, Prapansak Srisapoome, Narongrit Muangmai, Orathai Sawatdichaikul, Darren K. Griffin, Agostinho Antunes, Prateep Duengkae, Uthairat Na-Nakorn, Yoichi Matsuda and Kornsorn Srikulnath
Genes 2025, 16(11), 1266; https://doi.org/10.3390/genes16111266 - 27 Oct 2025
Cited by 1 | Viewed by 1028
Abstract
Background/Objectives: North African catfish (Clarias gariepinus) and bighead catfish (Clarias macrocephalus) play crucial roles in Thai aquaculture. Although significant growth disparities exist among these species, the genetic factors underlying these differences are still unknown. This study aimed to identify [...] Read more.
Background/Objectives: North African catfish (Clarias gariepinus) and bighead catfish (Clarias macrocephalus) play crucial roles in Thai aquaculture. Although significant growth disparities exist among these species, the genetic factors underlying these differences are still unknown. This study aimed to identify GH1 gene polymorphisms, in North African and bighead catfish populations across Thailand and Laos. Methods: Sequencing, phylogenetic, and clustering analyses were performed to assess genetic diversity, selection patterns, and lineage differentiation of catfish partial GH1 fragment. Results: Six alleles of the studied fragment of GH1 gene were identified; they differed at 33 variable sites within intron 2, located between the conserved regions at the 3′ end of exon 2 and the 5′ end of exon 3. At the population-level, GH1 exhibited low heterozygosity (mean Ho = 0.043 ± 0.023; He = 0.059 ± 0.028). Bayesian clustering analyses identified two distinct genetic clusters, corresponding to North African and bighead catfish, apart from the bighead population in Laos, indicating their distinct genetic origins. Evidence of purifying selection was observed in both species. Phylogenetic analysis indicated the presence of lineage-specific alleles in the GH1 gene. Conclusions: These findings provide valuable insights into GH1 polymorphisms in commercially important catfish species and may help to develop future breeding programs aimed at enhancing aquaculture productivity. Full article
(This article belongs to the Section Animal Genetics and Genomics)
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18 pages, 979 KB  
Article
Genetic Diversity and Selection of MHC I-UAA in Clariid Catfish from Thailand: Implications for Breeding and Conservation
by Ton Huu Duc Nguyen, Piangjai Chalermwong, Chananya Patta, Wattanawan Jaito, Worapong Singchat, Thitipong Panthum, Trifan Budi, Kednapat Sriphairoj, Sittichai Hatachote, Prapansak Srisapoome, Narongrit Muangmai, Darren K. Griffin, Agostinho Antunes, Prateep Duengkae and Kornsorn Srikulnath
Genes 2025, 16(9), 1106; https://doi.org/10.3390/genes16091106 - 18 Sep 2025
Viewed by 1282
Abstract
Background/Objectives: Understanding variabilities in the Major Histocompatibility Complex class I (MHC I) gene is essential for evaluating immunogenetic diversity in clariid catfish. MHC I plays a critical role in immune defense by presenting endogenous antigens to cytotoxic T cells. Therefore, we [...] Read more.
Background/Objectives: Understanding variabilities in the Major Histocompatibility Complex class I (MHC I) gene is essential for evaluating immunogenetic diversity in clariid catfish. MHC I plays a critical role in immune defense by presenting endogenous antigens to cytotoxic T cells. Therefore, we aimed to investigate the genetic diversity, selection patterns, and phylogenetic relationships of MHC I alleles in three important clariid catfish species (Clarias gariepinus, Clarias macrocephalus, and Clarias batrachus) across wild and hatchery populations in Thailand. Methods: Targeted next-generation sequencing of a 174 bp fragment partial exon 6 of MHC I-UAA gene was performed, along with phylogenetic analyses, neutrality tests and dN/dS analyses. Results: Overall, 91 novel alleles were identified in 674 individuals, all of which were novel (100% novelty), with none matching existing reference sequences, thereby revealing extensive variation in population-specific variants. Phylogenetic analyses revealed allele sharing among species, which was consistent with balanced selection. Neutrality tests and dN/dS analyses provided evidence of both purifying and diversifying selection, with episodic positive selection detected at multiple codon sites associated with the antigen-binding α1 domain. Distinct selection patterns among populations, influenced by local environmental conditions and human pressures, along with high allele richness, are reflected in the diversity of immunogenetic variations. Conclusions: These findings provide critical insights into immune adaptation and highlight the potential of MHC I as a functional marker for genetic monitoring. Although a causal relationship between MHC I polymorphism and disease resistance is debated, studies suggest associations with pathogen survival, indicating future implications for aquaculture breeding and conservation, particularly in marker-assisted selection for broodstock management in Thailand. Full article
(This article belongs to the Section Animal Genetics and Genomics)
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14 pages, 813 KB  
Article
The Influence of Different Feeding Time Management on the Growth and Stress Response of the African Catfish Clarias gariepinuns (Burchel, 1822) Under Farming Conditions
by Marc-C. Hildebrand, David Runge, Björn Bassmann and Harry W. Palm
Fishes 2025, 10(8), 414; https://doi.org/10.3390/fishes10080414 - 18 Aug 2025
Cited by 2 | Viewed by 2767
Abstract
In this study, the growth and welfare of the African catfish (Clarias gariepinus, Burchell 1822) were investigated under industrial farming conditions. For this purpose, the growing success (cm, g) and typical stress related parameters (glucose-, lactate-, cortisol-concentrations, growth hormone, HSI-liver index) [...] Read more.
In this study, the growth and welfare of the African catfish (Clarias gariepinus, Burchell 1822) were investigated under industrial farming conditions. For this purpose, the growing success (cm, g) and typical stress related parameters (glucose-, lactate-, cortisol-concentrations, growth hormone, HSI-liver index) were investigated on the African catfish (102–841 g) in relation to an external stressor (working light and noise) and different feeding regimes (day, night, and day and night feeding) over 83 days. As no significant effects were found among the experimental feeding treatments in relation to the growth performance and investigated stress parameters, the time of feeding seems to have less impact to the production success and stress reactions as suggested before. Regarding our results, the effect of feeding conditioning could have played a strong factor likewise the ageing process of the reared fish species which is known to be rather photophobic. Therefore, the factor of conditioning and its influence to the time shift in feeding regimes and the impact of noise and light stressors during feeding should be investigated separately in future experiments to obtain further results in this context and clarify the validity of the best feeding conditions for African catfish. Full article
(This article belongs to the Special Issue Physiological Response Mechanisms of Aquatic Animals to Stress)
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30 pages, 4680 KB  
Article
Production of Lanhouin—A Fermented Catfish (Clarias gariepinus) Using the Selected Lactiplantibacillus pentosus Probiotic Strain
by Vasilica Barbu, Chimène Agrippine Rodogune Yelouassi, Mihaela Cotârleț, Leontina Grigore-Gurgu, Comlan Kintomagnimessè Célestin Tchekessi and Pierre Dossou-Yovo
Sustainability 2025, 17(14), 6387; https://doi.org/10.3390/su17146387 - 11 Jul 2025
Viewed by 1807
Abstract
Lactic acid bacteria (LAB) preserve many foods and play a vital role in fermented food products. This study designed a controlled biotechnological process of catfish (Clarias gariepinus) fermentation with a LAB starter culture isolated from corn hydrolysate. The BY (Barbu-Yelouassi) LAB [...] Read more.
Lactic acid bacteria (LAB) preserve many foods and play a vital role in fermented food products. This study designed a controlled biotechnological process of catfish (Clarias gariepinus) fermentation with a LAB starter culture isolated from corn hydrolysate. The BY (Barbu-Yelouassi) LAB strain was characterized regarding fermentative and antimicrobial potential, and its adaptability in the simulated gastrointestinal system (SGIS). After 10–12 h of cultivation on MRS broth (De Man Rogosa and Sharpe), the strain achieved the maximum exponential growth, produced maximum lactic acid (33.04%), and decreased the acidity up to pH 4. Also, the isolated strain showed increased tolerance to an acidic pH (3.5–2.0), high concentrations of salt (2–10%), and high concentrations of bile salts (≤2%). The behavior in SGIS demonstrated good viability after 2 h in artificial gastric juice (AGJ) (1 × 107 CFU/mL) and up to 2 × 103 CFU/mL after another 6 h in artificial intestinal juice (AIJ). The characterized BY strain was identified with the API 50CHL microtest (BioMerieux) as Lactiplantibacillus pentosus (Lbp. pentosus) (90.9% probability), taxon confirmed by genomic DNA sequencing. It was also demonstrated that Lbp. pentosus BY inhibited the growth of pathogenic bacteria, including Escherichia coli, Staphylococcus aureus, Listeria monocytogenes, and sporulated bacteria, such as Bacillus cereus. Additionally, it suppressed the sporulation of fungi like Aspergillus niger, Fusarium sp., and Penicillium sp. Furthermore, the Lbp. pentosus BY strain was used to ferment catfish, resulting in three variants of lanhouin (unsalted, with 10% salt, and with 15% salt), which exhibited good microbiological safety. Full article
(This article belongs to the Special Issue Sustainable Food Preservation)
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