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Molecular Approaches to Aquatic Animal Health: Immunobiology, Infectious Diseases, Antimicrobial Resistance and One Health

A Special Issue of International Journal of Molecular Sciences (ISSN 1422-0067) belonging to the section "Molecular Immunology".

Deadline for manuscript submissions: 31 March 2027 | Viewed by 451

Editor


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Guest Editor
Department of Veterinary Microbiology, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand
Interests: aquaculture; aquatic animal health

Special Issue Information

Dear Colleagues,

Aquaculture is one of the fastest-growing food production sectors worldwide and plays a vital role in global food security, nutrition and sustainable livelihoods. However, the increasing emergence of infectious diseases, antimicrobial resistance (AMR) and environmental stressors continue to threaten sustainable aquaculture, aquatic ecosystem health and global food security. These interconnected challenges underscore the need for a deeper molecular understanding of host immunity, pathogen evolution, antimicrobial resistance and disease transmission within a One Health framework.

Recent advances in molecular sciences—including whole-genome sequencing, comparative genomics, transcriptomics, proteomics, metabolomics, molecular diagnostics, microbiome analysis, molecular epidemiology and computational biology—have transformed aquatic animal health research. These technologies provide unprecedented opportunities to elucidate immune regulatory networks, characterize pathogen diversity and evolution, identify virulence determinants and antimicrobial resistance mechanisms, discover diagnostic and prognostic biomarkers and support evidence-based disease surveillance and control. These molecular approaches also enable high-resolution characterization of pathogen evolution, transmission dynamics, host adaptation and the emergence and dissemination of antimicrobial resistance determinants, thereby strengthening integrated disease surveillance and One Health preparedness.

This Special Issue aims to showcase innovative molecular research that advance aquatic animal health in fish, crustaceans, mollusks and other aquatic organisms. We welcome original research articles, reviews, communications and perspectives focusing on molecular immunobiology, infectious diseases, antimicrobial resistance and One Health. Topics of particular interest include host–pathogen interactions; pathogen genomics, phylogenomics, whole-genome sequencing and comparative genomics; transcriptomics, proteomics, metabolomics and epigenomics; molecular diagnostics and biomarker discovery; antimicrobial resistance mechanisms, resistome analysis and genomic surveillance; microbiome–host interactions; vaccine antigen discovery and development, immunostimulants, immune modulation and host genetic resistance; molecular epidemiology and integrated One Health surveillance. Studies integrating artificial intelligence, machine learning and bioinformatics to analyze molecular datasets and improve disease prediction, molecular diagnostics, genomic surveillance and precision disease management are also encouraged.

By integrating advances in molecular biology with aquatic animal health, infectious disease research, antimicrobial resistance and One Health, this Special Issue aims to provide an interdisciplinary platform for disseminating cutting-edge molecular research that supports sustainable aquaculture through improved disease prevention, molecular surveillance, antimicrobial stewardship and evidence-based One Health interventions.

Dr. Partho Debnath
Guest Editor

Manuscript Submission Information

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Keywords

  • aquatic animal health
  • molecular immunology
  • infectious diseases
  • antimicrobial resistance
  • One Health
  • whole-genome sequencing
  • host–pathogen interactions
  • comparative genomics
  • molecular diagnostics
  • molecular epidemiology

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Published Papers (1 paper)

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Research

18 pages, 2482 KB  
Article
Whole-Genome Sequencing Reveals Virulence and Antimicrobial Resistance Determinants of Lactococcus garvieae Causing Lactococcosis in Cage-Cultured Nile Tilapia (Oreochromis niloticus) in Thailand
by Putita Chokmangmeepisarn, Yosapon Adisornprasert, Pakapon Meachasompop, Benchawan Kumwan, Pimrawee Chaemlek, Prapansak Srisapoome, Kednapat Sriphairoj, Sittichai Hatachote, Niyada Umputhorn, Chonthicha Choppradit, Pichasit Sangmek, Channarong Rodkhum and Anurak Uchuwittayakul
Int. J. Mol. Sci. 2026, 27(17), 7582; https://doi.org/10.3390/ijms27177582 - 24 Aug 2026
Viewed by 234
Abstract
Lactococcosis is an important bacterial disease affecting farmed fish worldwide and is primarily associated with Lactococcus garvieae, Lactococcus petauri, and Lactococcus formosensis. In Thailand, information on L. garvieae infection in tilapia remains limited, particularly regarding genome-based identification, virulence determinants, and [...] Read more.
Lactococcosis is an important bacterial disease affecting farmed fish worldwide and is primarily associated with Lactococcus garvieae, Lactococcus petauri, and Lactococcus formosensis. In Thailand, information on L. garvieae infection in tilapia remains limited, particularly regarding genome-based identification, virulence determinants, and antimicrobial resistance profiles. This study characterized two L. garvieae isolates, AAHM-LG2501 and AAHM-LG2509, recovered from a lactococcosis outbreak in cage-cultured Nile tilapia (Oreochromis niloticus) in Ubon Ratchathani province, Thailand. Both isolates exhibited typical phenotypic characteristics of L. garvieae, including Gram-positive cocci, alpha hemolysis, positive capsule staining, and positive carbohydrate fermentation. Whole-genome sequencing confirmed both isolates as L. garvieae, with genome sizes of approximately 1.95 Mb and a G + C content of 38.9%. Genome-based taxonomic analysis supported species identification based on dDDH and ANI values, and both isolates were assigned to sequence type ST95 and serotype I. Virulence factor analysis identified 288 virulence-associated genes representing 97 virulence factors across 14 functional categories. Capsule-associated genes were prominent, together with genes involved in heme uptake, adhesion, hemolysis, stress survival, biofilm formation, and host adaptation. Ten capsule biosynthesis genes, including cpsABCFGKO, cps4A, and cps4I, as well as LPxTG cell wall anchor protein genes, were detected. Antimicrobial susceptibility testing showed resistance to nalidixic acid, oxolinic acid, and oxacillin, while reduced inhibition zones were observed for enrofloxacin and sulfamethoxazole-trimethoprim. Genome analysis identified predicted antimicrobial resistance determinants, including lsaD, vanT, vanY, and mdtA. Resistance-associated protein variants were detected in gyrA and gyrB, suggesting that target alteration may contribute to fluoroquinolone resistance. Overall, this study provides genome-level evidence of virulence and antimicrobial resistance determinants in L. garvieae from Thai tilapia and highlights the importance of whole-genome sequencing for accurate diagnosis, epidemiological surveillance, and disease management in aquaculture. Full article
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