Shaping the Future of Horticultural Crops: Omics and Biotechnological Tools for Resilience to Abiotic Stress

A special issue of Horticulturae (ISSN 2311-7524). This special issue belongs to the section "Genetics, Genomics, Breeding, and Biotechnology (G2B2)".

Deadline for manuscript submissions: 25 September 2025 | Viewed by 284

Special Issue Editors


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Guest Editor
Laboratory of Pomology, School of Agriculture, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece
Interests: horticulture; fruit science; plant physiology; abiotic stress; multi-omics; plant biotechnology; olive

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Guest Editor
Faculty of Agriculture, Forestry and Natural Environment, School of Agriculture, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece
Interests: horticulture; metabolomics; plant physiology; proteomics; abiotic stress; high-throughput sequencing
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Special Issue Information

Dear Colleagues,

Climate change is characterized by temperature fluctuations and/or extreme climate events. Events, that is, which threaten horticultural crops (e.g., fruits, vegetables, etc.) by negatively affecting yield and fruit quality, leading to substantial economic losses. The integration of omics technologies and advanced biotechnological tools could provide a comprehensive understanding of the complex molecular mechanisms that regulate plants’ responses to abiotic stress conditions, such as extreme temperatures (heat/cold), drought, salinity, and nutrient deficiencies. These advances could create significant opportunities to enhance genetic improvement strategies, with the aim of developing resilient horticultural crops that maintain a high quality and productivity despite environmental challenges.

This Special Issue aims to include cutting-edge research on the bioinformatic integration of omics data (genomics, transcriptomics, proteomics, metabolomics, epigenetics, etc.) with novel functional approaches—including CRISPR-based genome editing, RNAi, and other biotechnological tools—to characterize the multi-level responses of horticultural crops to abiotic stress conditions, and to uncover the underlying molecular mechanisms involved in their adaptation processes. We invite original research articles, reviews, and perspectives focusing on the physiological and molecular profiles of horticultural crops under abiotic stress conditions, including the functional characterization of stress-related genes and proposals of plant breeding strategies that combine basic research with applied solutions to enhance abiotic stress resilience.

Dr. Christina Skodra
Dr. Georgia Tanou
Guest Editors

Manuscript Submission Information

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Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Horticulturae is an international peer-reviewed open access monthly journal published by MDPI.

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Keywords

  • abiotic stress
  • horticultural crops
  • omics technologies
  • genome editing
  • biotechnology
  • horticultural crop breeding
  • climate change and agriculture

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Published Papers (1 paper)

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Research

14 pages, 5571 KiB  
Article
Transcriptomic Insights into Seed Germination Mechanisms of the Bamboo Qiongzhuea tumidinoda
by Feiyi Huang, Jiaxin Wang, Xu Zhang and Shuyan Lin
Horticulturae 2025, 11(4), 430; https://doi.org/10.3390/horticulturae11040430 - 17 Apr 2025
Viewed by 165
Abstract
Seed germination is a complex developmental process and a critical stage in plant development. The mechanism of seed germination in Qiongzhuea tumidinoda remains unclear. In this study, the transcriptomic analysis of four germination stages was conducted to reveal the regulatory mechanism. Totals of [...] Read more.
Seed germination is a complex developmental process and a critical stage in plant development. The mechanism of seed germination in Qiongzhuea tumidinoda remains unclear. In this study, the transcriptomic analysis of four germination stages was conducted to reveal the regulatory mechanism. Totals of 2352, 5523, and 4533 differentially expressed genes (DEGs) were identified in S2 vs. S1, S3 vs. S1, and S4 vs. S1, respectively. A total of 998 DEGs were identified during seed germination. Enrichment studies indicated that the DEGs were mainly involved in plant hormone signal transduction and phenylpropanoid biosynthesis pathways. In addition, 131 transcription factors were differentially expressed, of which ERFs and MYBs may play pivotal roles in seed germination. To sum up, TGA4, IAA24, SAUR32, AHK4, and HCT4 may regulate seed germination. Full article
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