Machine Learning and Artificial Intelligence Algorithms in Neuroscience

A special issue of Brain Sciences (ISSN 2076-3425). This special issue belongs to the section "Computational Neuroscience, Neuroinformatics, and Neurocomputing".

Deadline for manuscript submissions: closed (15 December 2025) | Viewed by 6055

Special Issue Editor


E-Mail Website
Guest Editor
Department of Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL, USA
Interests: artificial intelligence; machine learning; medical image processing; healthcare; cancer
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

Advancements in Machine Learning (ML) and Artificial Intelligence (AI) are transforming neuroscience, offering powerful tools to analyze brain function, diagnose neurological disorders, and develop innovative treatments. AI-driven approaches significantly enhance neuroimaging analysis, brain–computer interfaces (BCIs), and cognitive neuroscience research, enabling personalized medicine and real-time decision-making in clinical applications. The ability of AI to process large-scale neuroimaging data, decode complex neural signals, and model cognitive functions has opened new possibilities in early disease detection, neurorehabilitation, and neuroproteins.

This Special Issue seeks to explore state-of-the-art methodologies that integrate AI/ML with neuroscience, addressing challenges in neuroimaging processing, neural signal decoding, cognitive modeling, neurodegenerative disease prediction, and neuro-inspired AI architectures. The application of deep learning, reinforcement learning, and explainable AI in neuroscience research continues to refine diagnostic accuracy and treatment strategies, making AI a vital tool in understanding and mimicking brain functions.

Dr. Mohsen Ahmadi
Guest Editor

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 250 words) can be sent to the Editorial Office for assessment.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Brain Sciences is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2200 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • machine learning
  • artificial intelligence
  • computational neuroscience
  • deep learning
  • neuroimaging
  • brain–computer interfaces
  • neural signal processing
  • cognitive modeling
  • neurodegenerative diseases
  • explainable AI

Benefits of Publishing in a Special Issue

  • Ease of navigation: Grouping papers by topic helps scholars navigate broad scope journals more efficiently.
  • Greater discoverability: Special Issues support the reach and impact of scientific research. Articles in Special Issues are more discoverable and cited more frequently.
  • Expansion of research network: Special Issues facilitate connections among authors, fostering scientific collaborations.
  • External promotion: Articles in Special Issues are often promoted through the journal's social media, increasing their visibility.
  • Reprint: MDPI Books provides the opportunity to republish successful Special Issues in book format, both online and in print.

Further information on MDPI's Special Issue policies can be found here.

Published Papers (3 papers)

Order results
Result details
Select all
Export citation of selected articles as:

Research

Jump to: Other

31 pages, 2485 KB  
Article
DCBAN: A Dynamic Confidence Bayesian Adaptive Network for Reconstructing Visual Images from fMRI Signals
by Wenju Wang, Yuyang Cai, Renwei Zhang, Jiaqi Li, Zinuo Ye and Zhen Wang
Brain Sci. 2025, 15(11), 1166; https://doi.org/10.3390/brainsci15111166 - 29 Oct 2025
Viewed by 875
Abstract
Background: Current fMRI (functional magnetic resonance imaging)-driven brain information decoding for visual image reconstruction techniques faces issues such as poor structural fidelity, inadequate model generalization, and unnatural visual image reconstruction in complex scenarios. Methods: To address these challenges, this study proposes a [...] Read more.
Background: Current fMRI (functional magnetic resonance imaging)-driven brain information decoding for visual image reconstruction techniques faces issues such as poor structural fidelity, inadequate model generalization, and unnatural visual image reconstruction in complex scenarios. Methods: To address these challenges, this study proposes a Dynamic Confidence Bayesian Adaptive Network (DCBAN). In this network model, deep nested Singular Value Decomposition is introduced to embed low-rank constraints into the deep learning model layers for fine-grained feature extraction, thus improving structural fidelity. The proposed Bayesian Adaptive Fractional Ridge Regression module, based on singular value space, dynamically adjusts the regularization parameters, significantly enhancing the decoder’s generalization ability under complex stimulus conditions. The constructed Dynamic Confidence Adaptive Diffusion Model module incorporates a confidence network and time decay strategy, dynamically adjusting the semantic injection strength during the generation phase, further enhancing the details and naturalness of the generated images. Results: The proposed DCBAN method is applied to the NSD, outperforming state-of-the-art methods by 8.41%, 0.6%, and 4.8% in PixCorr (0.361), Incep (96.0%), and CLIP (97.8%), respectively, achieving the current best performance in both structural and semantic fMRI visual image reconstruction. Conclusions: The DCBAN proposed in this thesis offers a novel solution for reconstructing visual images from fMRI signals, significantly enhancing the robustness and generative quality of the reconstructed images. Full article
Show Figures

Figure 1

23 pages, 5700 KB  
Article
Hybrid Deep Learning Architecture with Adaptive Feature Fusion for Multi-Stage Alzheimer’s Disease Classification
by Ahmad Muhammad, Qi Jin, Osman Elwasila and Yonis Gulzar
Brain Sci. 2025, 15(6), 612; https://doi.org/10.3390/brainsci15060612 - 6 Jun 2025
Cited by 12 | Viewed by 3774
Abstract
Background/Objectives: Alzheimer’s disease (AD), a progressive neurodegenerative disorder, demands precise early diagnosis to enable timely interventions. Traditional convolutional neural networks (CNNs) and deep learning models often fail to effectively integrate localized brain changes with global connectivity patterns, limiting their efficacy in Alzheimer’s disease [...] Read more.
Background/Objectives: Alzheimer’s disease (AD), a progressive neurodegenerative disorder, demands precise early diagnosis to enable timely interventions. Traditional convolutional neural networks (CNNs) and deep learning models often fail to effectively integrate localized brain changes with global connectivity patterns, limiting their efficacy in Alzheimer’s disease (AD) classification. Methods: This research proposes a novel deep learning framework for multi-stage Alzheimer’s disease (AD) classification using T1-weighted MRI scans. The adaptive feature fusion layer, a pivotal advancement, facilitates the dynamic integration of features extracted from a ResNet50-based CNN and a vision transformer (ViT). Unlike static fusion methods, our adaptive feature fusion layer employs an attention mechanism to dynamically integrate ResNet50’s localized structural features and vision transformer (ViT) global connectivity patterns, significantly enhancing stage-specific Alzheimer’s disease classification accuracy. Results: Evaluated on the Alzheimer’s 5-Class (AD5C) dataset comprising 2380 MRI scans, the framework achieves an accuracy of 99.42% (precision: 99.55%; recall: 99.46%; F1-score: 99.50%), surpassing the prior benchmark of 98.24% by 1.18%. Ablation studies underscore the essential role of adaptive feature fusion in minimizing misclassifications, while external validation on a four-class dataset confirms robust generalizability. Conclusions: This framework enables precise early Alzheimer’s disease (AD) diagnosis by integrating multi-scale neuroimaging features, empowering clinicians to optimize patient care through timely and targeted interventions. Full article
Show Figures

Figure 1

Other

Jump to: Research

44 pages, 2347 KB  
Systematic Review
Neuropsychological Mechanisms Associated with the Effectiveness of AI-Delivered Health Promotion Programs: A Comprehensive Meta-Analysis
by Evgenia Gkintoni and Apostolos Vantarakis
Brain Sci. 2026, 16(4), 389; https://doi.org/10.3390/brainsci16040389 - 31 Mar 2026
Viewed by 556
Abstract
Background: The global burden of mental disorders continues to escalate, necessitating scalable, evidence-based interventions. Artificial intelligence (AI)-delivered health promotion programs represent a promising approach to addressing treatment gaps by targeting the neuropsychological mechanisms that underlie mental health outcomes. This meta-analysis synthesizes evidence on [...] Read more.
Background: The global burden of mental disorders continues to escalate, necessitating scalable, evidence-based interventions. Artificial intelligence (AI)-delivered health promotion programs represent a promising approach to addressing treatment gaps by targeting the neuropsychological mechanisms that underlie mental health outcomes. This meta-analysis synthesizes evidence on the effectiveness of AI-delivered interventions in improving executive function, emotion regulation, and clinical outcomes across diverse populations. Methods: A systematic search identified 186 studies (n = 22,755 participants) published between 2020 and 2025. Random-effects meta-analyses estimated pooled effect sizes (Hedges’ g, calculated as between-group standardized mean differences with small-sample correction [J = 1 − 3/(4df − 1)]) for primary outcomes. Between-study heterogeneity was quantified using I2 and τ2 statistics. To address dependency among effect sizes from studies reporting multiple outcomes, robust variance estimation (RVE) was employed. Subgroup analyses examined intervention modalities, delivery formats, and clinical populations. Moderator analyses explored sources of heterogeneity, including publication year, sample size, intervention duration, control condition type, risk-of-bias rating, geographic region, and AI sophistication tier, and mediational models tested putative therapeutic mechanisms. Results: AI-delivered interventions demonstrated a significant overall effect on health outcomes (g = 0.68, 95% CI [0.58, 0.78]; τ2 = 0.12; I2 = 73.4%). Executive function outcomes showed moderate effects (g = 0.61, τ2 = 0.08), with working memory improvements being strongest (g = 0.72). Emotion regulation outcomes demonstrated moderate-to-large effects (g = 0.61, 95% CI [0.51, 0.70], τ2 = 0.006); formal subgroup pooled estimates by emotion regulation strategy were not calculated due to insufficient studies per strategy (k < 3 per category); individual study effect sizes ranged from g = 0.27 to g = 1.11. Among 41 studies examining neuropsychological mechanisms, convergent patterns suggested involvement of prefrontal neural circuits (DLPFC), enhanced alpha-band activity, and improved heart rate variability; however, formal mediation was tested in only 18 studies (9.7%). Among clinical populations, interventions for cognitive impairment yielded the largest effects (g = 1.02; this finding should be interpreted cautiously given modest cumulative sample size [n = 482], potential small-study effects [Egger’s p = 0.08], and trim-and-fill adjusted estimate of g = 0.85), followed by mental health conditions (g = 0.72), while other clinical populations showed smaller but significant improvements (g = 0.19). Mobile applications (g = 0.78) and chatbot-based interventions (g = 0.74) demonstrated the strongest effects among delivery formats. Among studies testing formal mediation, analyses suggested mindfulness (β = 0.42), decentering (β = 0.38), and cognitive reappraisal (β = 0.45) as processes associated with therapeutic outcomes. Conclusions: AI-delivered health promotion programs demonstrate significant effectiveness across executive function, emotion regulation, and clinical outcomes, though substantial heterogeneity (I2 = 45–82%) indicates meaningful variability warranting attention to subgroup-specific effects. Given the diversity of intervention types included (chatbots, mobile apps, VR systems, neuromodulation), pooled estimates should be interpreted as characterizing the average effect across this heterogeneous landscape; subgroup-specific estimates provide more precise guidance for clinical decision-making regarding specific modalities. Effects are associated with convergent patterns of neuropsychological mechanisms, though mechanistic conclusions remain preliminary given that only 22% of studies (41/186) examined neuropsychological mechanisms, and formal mediation analyses were conducted in only 18 studies (9.7%); most of the mechanistic evidence is correlational rather than causal. Future research should establish standardized AI taxonomies, optimize adaptive algorithms, conduct adequately powered replication studies in populations with cognitive impairment, prioritize experimental mediation designs to establish causal pathways, and evaluate long-term maintenance effects with a minimum of 6–12-month follow-up periods. Full article
Show Figures

Figure 1

Back to TopTop