Gut Microbiota in Aquatic Animals Nutrition, Immunity, and Host–Microbe Interactions

A special issue of Biology (ISSN 2079-7737). This special issue belongs to the section "Microbiology".

Deadline for manuscript submissions: 15 February 2026 | Viewed by 16

Special Issue Editor


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Guest Editor
1. Freshwater Fisheries Research Center, Chinese Academy of Fishery Science, Wuxi 214081, China
2. Wuxi Fisheries College, Nanjing Agricultural University, Wuxi 214081 China
Interests: fish immunology; virus; AMPs; toxicology; cell lines; vaccines; aquaculture; biotechnology
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Special Issue Information

Dear Colleagues,

Intestinal microbiota play a crucial role in aquatic animals' physiological processes, acting as a "second genome" that regulates nutrition, immunity, and overall health. By participating in energy metabolism, vitamin synthesis, and pathogen defense, gut microbes significantly influence host fitness and adaptation. Advances in high-throughput sequencing and metabolomics have deepened our understanding of host–microbiota relationships, yet key challenges remain—particularly in unraveling mechanistic pathways and developing effective microbial management strategies.

This Special Issue explores the interdisciplinary frontier of gut microbiota in aquatic animals, emphasizing the following:

  • Nutrient utilization mechanisms shaped by microbial communities, enhancing metabolic efficiency;
  • Microbial–immune system crosstalk, offering insights into disease resistance and probiotic applications;
  • Resilience of gut ecosystems under environmental stressors, informing conservation and husbandry practices. 

We welcome original research on topics such as host–microbe coevolution, functional probiotic screening, and multi-omics approaches to decode microbiota dynamics. Contributions may span wild or captive aquatic species, from invertebrates to vertebrates, providing a holistic perspective on microbial roles in aquatic ecosystems.

Prof. Dr. Qunlan Zhou
Guest Editor

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Keywords

  • gut microbiota
  • aquatic animal health
  • host–microbe interactions
  • functional probiotics
  • immunomodulation
  • nutrient metabolism
  • multi-omics integration
  • microbial ecology
  • environmental adaptation

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Published Papers

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