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Life
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20 December 2021

The Role of the CREB Protein Family Members and the Related Transcription Factors in Radioresistance Mechanisms

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1
Department of Medicine and Ageing Sciences, G. d’Annunzio University of Chieti-Pescara, 66100 Chieti, Italy
2
Laboratoire de Nanomédecine, Imagerie, Thérapeutique EA 4662, Université Bourgogne Franche-Comté, 25030 Besançon, France
3
Service de Chirurgie Orthopédique, Traumatologique et Plastique, CHU, 25030 Besançon, France
*
Author to whom correspondence should be addressed.
This article belongs to the Special Issue Space Flight Factors and Cytoskeleton Organization

Abstract

In the framework of space flight, the risk of radiation carcinogenesis is considered a “red” risk due to the high likelihood of occurrence as well as the high potential impact on the quality of life in terms of disease-free survival after space missions. The cyclic AMP response element-binding protein (CREB) is overexpressed both in haematological malignancies and solid tumours and its expression and function are modulated following irradiation. The CREB protein is a transcription factor and member of the CREB/activating transcription factor (ATF) family. As such, it has an essential role in a wide range of cell processes, including cell survival, proliferation, and differentiation. Among the CREB-related nuclear transcription factors, NF-κB and p53 have a relevant role in cell response to ionising radiation. Their expression and function can decide the fate of the cell by choosing between death or survival. The aim of this review was to define the role of the CREB/ATF family members and the related transcription factors in the response to ionising radiation of human haematological malignancies and solid tumours.

1. Introduction

Outside of the Earth’s protective magnetosphere, crews are exposed to galactic cosmic rays (GCR) and solar proton events (SPE) that occur when particles emitted by the sun, mostly protons, become accelerated in the interplanetary space due to a coronal mass ejection shock [1]. The exposure to GCR in the form of high-energy (HZE) ions, secondary protons, and neutrons has high linear energy transfer values that evoke complex DNA and other cellular damage [2]. In the purpose of controlling the health risks associated with the unique hazards of space flight, highly sophisticated systems have been developed [3]. A key question that impacts risk assessment is how cancers caused by HZE radiation compare to either radiogenic cancer induced by ground-based radiation [4]. As a unifying concept, NASA studies have sought to examine how space radiation exposure induces genetic and epigenetic modifications, noted as the hallmarks of cancer onset [5]. Due to the lack of human epidemiological data related to the types of radiation found in space, the current research utilises a translational approach which includes advanced human cell-based model systems exposed to space radiation simulants connected with human molecular pathways [6]. This approach allows relating the biological effects of space radiation to effects from similar exposure to ground-based gamma rays and X-rays to extrapolate the results to large human epidemiological cohorts [6,7]. Among the molecules involved at the cellular level, the CREB/ATF family plays a crucial role.
The CREB protein was initially described as a cAMP-responsive transcription factor involved in the regulation of the somatostatin gene [8]. Today, it is known to modulate gene transcription through binding to DNA sequences known as the cAMP response elements (CREs) [9]. In the human genome, there are approximately 750,000 of these CREs, although most of them are not available for protein binding as their cytosine methylation physically prevents these interactions [10]. The CREB/ATF transcription factors have key roles in cell survival, proliferation, and differentiation, as well as in apoptosis and adaptive responses [11]. Nuclear factor-κB (NF-κB) appears to be the most important CREB-related transcription factor [12]. Increased NF-κB activity can be considered as a hallmark of different diseases, such as human leukaemia, lymphoma, and other types of cancers [13]. NF-κB activity can be induced by ionising radiation, which appears to promote enhanced survival of human leukaemia K562 cells [14]. Indeed, a link has been shown between constitutive NF-κB activity, basal apoptosis, and radiosensitivity in breast carcinoma cell lines [15]. Furthermore, high NF-κB activity in human cancers can promote apoptosis suppression and radiotherapy resistance [16].
The present review is focused on the complex biochemical interactions of the CREB/ATF family members and the related transcription factors in the response to ionising radiation of human haematological malignancies and solid tumours.

2. Ionising Radiation: Radioresistance and Radiosensitivity

When atoms disintegrate, energy is released in the form of ionising radiation, which includes electromagnetic waves (e.g., gamma rays, X-rays) and particles (neutrons, alpha and beta particles). They can have a sufficient level of energy to result in ionisation of atoms and molecules [17]. When an organism is exposed to ionising radiation, the energy is absorbed by the atoms of the biomolecules in the cells, which become ionised or excited [18]. This can result in the formation of free radicals and reactive oxygen species (ROS) [19]. This build-up of ROS can then lead to several types of cellular damage in the form of genetic effects with direct alterations of DNA integrity, epigenetic effects with modifications of the DNA, or what are known as bystander effects [20], as further defined below.
To better understand the distinction between targeted and nontargeted effects of ionising radiation, it is necessary to consider the biological responses not just of the irradiated cells, which will mainly be killed, but particularly of the surviving cells in the close vicinity that have not undergone direct irradiation. Genomic instability is seen as the appearance of genetic abnormalities in the “offspring” of both the surviving irradiated cells and their close neighbours. They may exhibit adaptive responses, which are characterised by changes in their radiation susceptibility—in a protective manner—following the initial dose of radiation (i.e., the challenge dose). This may also apply to the cells previously exposed to one or more low doses of radiation [14] since it was seen that exposure to any radiation dose is pivotal in terms of risks [15]. Indeed, carcinogenesis is characterised by a multistage process where different target genes undergo modifications of their expression after radiation exposure in a dose-dependent manner. DNA repair genes, proto-oncogenes, and tumour suppressor genes shall be responsible for the deregulation of the cell cycle and the alteration of the apoptotic pathway [16,17]. In addition, the expression of small non-coding RNAs is affected by ionising radiation [18]. As indicated above, the main cellular effects of ionising radiation can be divided into three groups: genetic effects, epigenetic effects, and bystander effects (Figure 1).
Figure 1. Genetic effects, epigenetic effects, and bystander effects of ionising radiations. The role of p53 depending on the IR dose is as follows: in response to a low IR dose, p53 induces cell survival and radioresistance; upon a moderate IR dose, p53 is not able to correctly repair damaged DNA, leading to carcinogenesis; upon a high IR dose, p53 is not able to repair irretrievably damaged DNA, resulting in radiosensitivity. = activation; = consequentiality; = overexpression.

2.1. Genetic Effects

The direct genetic effects arising from radiation-induced DNA lesions are single-strand breaks or double-strand breaks, which lead, respectively, to the activation of the DNA repair process and apoptosis [21,22]. Furthermore, accumulation of ROS can also lead to indirect effects of ionising radiation that can cause structural and functional defects of the cellular nucleic acids, proteins, and lipids. This intracellular damage accumulation can lead to tumour development due to the increased DNA mutation rate [23]. In other cases, ROS-mediated oxidation can result in chromosomal rearrangements and errors in recombination processes [21,22] or damage to mitochondrial DNA. All these events have important roles in the development of secondary malignancies after radiotherapy [24].

2.2. Epigenetic Effects

Low ionising radiation doses can induce epigenetic effects at the cellular level through the involvement of ROS, and they can also promote carcinogenesis [25]. The main epigenetic modifications are DNA methylation of CpG islands of the gene promoter regions, with inhibition of gene expression [26] and histone acetylation with gene overexpression [27,28].

2.3. Bystander Effects

The signals that arise from radiation-induced bystander effects can be transmitted through tissues by means of direct intercellular contacts, similarly to local paracrine effects, or by means of the more remote actions of molecules, similarly to endocrine effects [29]. Ionising radiation can thus induce mutations not only within the nontargeted surrounding cells, but also in distant tissues [30]. This can be due to communication between cells through their gap junctions [30], various ligands and their receptors [31], and other released factors (e.g., ROS, interleukin (IL) 1, and transforming growth factor-β1) and their receptors [32,33]. Indeed, carcinogenesis induction has been proved for nearby unirradiated cells [34].
Overall, cell response to ionising radiation depends on the balance between cell cycle progression, DNA repair, and apoptosis [35]. P53 plays a key role here, as the cell cycle arrest induced in response to DNA damage can allow DNA repair or induce apoptosis [36]. This depends further on the dose of the ionising radiation, whereby low doses can allow DNA repair, which induces cell protection (i.e., radioresistance), while high doses trigger apoptosis, and hence cell death (radiosensitivity) [37].
Radiation-induced bystander effects appear to be correlated to tumour induction through enhanced radioresistance or increased cell proliferation [38]. Here, nitric oxide (NO) has a crucial role as it is produced and released by irradiated cells and it is able to act on nonirradiated bystander cells [39]. Moreover, the NO effects depend on the radiation dose as while NO can be cytotoxic and thus cause DNA damage leading to cell death, it can also be cytoprotective by protecting cells from apoptosis. The pro- or antitumoral properties of NO depend on local concentration, exposure time, redox state of the cell and its compartmentalization [38,40].
Thus, cells can respond to a low or priming dose of radiation by acquiring radioresistance as defined by the so-called radiation-induced adaptive response [41]. Based on this evidence, bystander effects can make cells radioresistant [42]. This appears to be caused by stimulation of the genes involved in DNA repair [43] and suppression of p53-dependent responses [44].

3. CREB Family Members and CREB-Binding Proteins

CREB is a basic region/ leucine zipper motif (bZIP) transcription factor as it contains a leucine zipper domain that facilitates dimerization and mediates its DNA binding [45,46]. The CREs to which these CREB dimers bind have the sequence TGACGTCA [47]. The phosphorylation of CREB at Ser133 promotes its binding to the coactivator CREB-binding protein (CBP), which facilitates transcription [48] as this binding promotes chromatin loosening through histone acetylation [49]. This pathway is involved in several biochemical metabolic cell processes, including glucose homeostasis, cell survival, proliferation, differentiation, apoptosis, memory, and learning [50]. The CREB/ATF transcription factors include three genes that are homologous: CREB itself, cAMP response element modulator (CREM), and ATF-1 [51]. Their gene products are thus three highly homologous proteins: CREB, CREM, and ATF-1. The CREB/ATF family to date includes CREB-1, CREB-2 (recently named ATF-4), CREB-3, CREB-5, CREM, ATF-1 (also known as TREB36), ATF-2 (also known as CRE-BP1), ATF-3, ATF-5 (also known as ATFX), ATF-6, ATF-7, and B-ATF [52]. As indicated above, they have bZIP domains, the sequences of which define their formation of homodimers or heterodimers. These heterodimers can include not just those with other CREB/ATF members, but also those with other bZIP-containing proteins, such as activator protein-1 (AP-1), C/EBP, and the Fos, Jun, and Maf proteins [53].
CREB, CREM, and ATF-1 have been characterised, and they are known to regulate gene transcription through their binding to CREs. In contrast, the properties of the structurally and functionally more distant ATF-2, ATF-3, and ATF-4 are not yet fully understood, although they are stress response proteins [54,55]. ATF-3 has been indicated as an adaptive response gene activated by several cell signals, which include those of the cytokines and genotoxic agents, and physiological stress [56]. ATF-3 has also been implicated in host defence systems against invading pathogens and cancer development [57,58]. ATF-3 expression is ubiquitous in all tissues, and it is localised in the nucleus; in the absence of cell stress, ATF-3 levels remain low [56]. However, ATF-3 is rapidly induced under cell stress, including during hypoxia, DNA damage, and heat or cold shock [56]. In contrast, in neuronal cells, ATF-4 has been shown to migrate from the cytoplasmic leaflet into the nucleus following activation of γ-aminobutyric acid receptors. ATF-4 has thus been suggested to be involved in neuronal plasticity, whereby it appears to couple receptor activity to gene expression [59].
Human CBP and its paralogue p300 are generally functionally interchangeable, although they each also have their own unique functions [60]. They have multiple domains for binding to over 40 transcription factors, and they are multifunctional adaptor proteins that have acetyl transferase activities for transcription factors and histones [61]. They are also important for cell cycle progression and cell differentiation where they can interact with components of the RNA polymerase II holoenzyme, with transcription factors, nuclear hormone receptors and their coactivators [62]. They have been shown to support normal cell differentiation and cell cycle arrest through interaction with GATA-1 (transcription activator/repressor); however, they can also promote cell cycle progression through interactions with c-Myb (transcription activator) and PU.1 (Ets family transcription factor). Several mutations have been described for the transcription factor-binding domains of these genes across different tumours [63].
Following identification of the molecular mechanisms through which CREB acts as an inducible regulator of such transcription factors, CREB has become the focus of many investigations, particularly with its involvement in various signalling pathways under both normal and pathological conditions. Furthermore, CREB interacts with other nuclear factors through its transactivation domain, which includes the Q2 domain, a constitutively active glutamine-rich domain, and the kinase-inducible domain that is regulated by cellular kinases. The interaction of the Q2 domain with TATA-binding protein-associated factors promotes constitutive activation, while the kinase-inducible domain promotes isomerisation through recruitment of coactivators CBP and p300 to gene promoters, with activation seen only following phosphorylation of Ser133 by specific cellular kinases [64].

4. NF-κB and p53: Two Crucial CREB-Related Transcription Factors

Most tumour cells show high levels of constitutive NF-κB activity, with increased cell survival promoted through antagonism of apoptotic pathways [65]. A key role of the NF-κB pathway is the promotion of the innate immune response through transcription of proinflammatory mediators, including chemokines, cytokines, antimicrobial peptides, and adhesion molecules [66,67]. The NF-κB family members include NF-κB1 (p50, p105), NF-κB2 (p52, p100), RelA (p65), c-Rel, and RelB [68]. Activation of NF-κB can occur through phosphorylation and proteolysis of the inhibitor of κB (IκB) or through an IκB-independent pathway [69] and as a stress-sensitive transcription factor. In fact, NF-κB is involved in regulation of the expression of stress-responsive genes [70]. In the nucleus, the interaction between the NF-κB family member RelA and CBP or p300 is required to promote NF-κB-dependent transcription of genes that induce proinflammatory responses. The RelA subunit activity involved in this interaction is potentiated by CBP and p300 [71]. P300 regulates cell sensitivity and has a proapoptotic function following cell damage [72]. The correlation between NF-κB and phosphorylated CREB is due to their interaction with CBP/p300 in the same region [73]. Consequently, this competition would lead to CREB-dependent inhibition of NF-κB activity [74]. In addition, CREB can induce an NF-κB-dependent antiapoptotic response in macrophages, which promotes macrophage survival and thus enhances the immune response [75].
Substantial evidence points to a critical role of the p300/CBP coactivators in p53 responses to DNA damage [76]. Interestingly, p53 was the prototype to demonstrate that p300, CBP, and the associated P/CAF acetylase can acetylate nonhistone transcription factors [77]. Both p300 and CBP can interact with p53, but only p300 appears to be involved in p53 stabilisation after DNA damage and p53-dependent apoptosis. The tumour suppressor protein p53 has key roles in prevention of the development of cancers, and it is inactivated in many human malignancies [78]. Indeed, p53 regulates expression of the genes involved in cell cycle control and apoptosis induction [79] and at the same time can induce transcription of DNA repair enzymes to promote cell survival [80]. It can be stimulated by cell stresses, such as oxidative stress, hypoxia, ionising radiation, and carcinogens [81], and its levels rise after DNA damage, whereas they are low in both normal and neoplastic cells under normal physiological conditions [82]. The uncovering that the TP53 gene physiologically expresses, in a tissue-dependent manner, several p53 splice variants (isoforms) provides an explanation for its pleiotropic biological activities [83]. In fact, among the different isoforms of p53, some have oncogenic potential, while others show oncosuppressor properties or, in some cases, can have both functions, depending on the cellular context [22]. The p53 family of proteins also includes p63 and p73 that can induce apoptosis by mediating cell cycle arrest at G2/M and G1/S [84]. Importantly, TP53 is deactivated in most of the human solid tumours due to missense mutations and deletions that impair its transcriptional function [85]. In cancer, the presence of p53 mutants leads to gain-of-function phenotypes due to increased cell growth and cell motility, coupled with carcinogenesis and chemoresistance [86]. The gain-of-function phenotype arises through chromatin changes following histone acetylation, which results in interactions between the STAT1/STAT2 complex and CBP/p300 on the NF-κB2 promoter [87].

5. CREB Family Members: An Active Role in Tumours

Several recent studies are proposing CREB/ATF and the related nuclear transcription factors as potential prognostic biomarkers [88]. It is well-known that CREB expression mediated by phosphorylation is essential for major cell survival functions [88]. Tumour cells have developed various mechanisms to achieve constitutive activation of CREB, including gene amplification, chromosome translocation, and inactivation of tumour suppressor genes, leading to uncontrolled proliferation of cells [89]. Therefore, it is hypothesised that CREB is directly involved in the pathogenesis of a variety of cancers (Table 1), including hematological malignancies [90]. CREB is often overexpressed in hematopoietic tumours [88,89,91], and its implication in the radiation response of lymphoid neoplastic cell lines has been demonstrated [92,93]. Overexpression of CREB is known to be associated with increased cell proliferation and migration and reduced apoptosis, processes that are both directly and indirectly linked to malignant transformation of cells [94]. In human melanoma, CREB and ATF-1 have been reported to act as survival factors and favour tumour growth and metastasis [95,96]. During the progression of melanoma, CREB and ATF-1 show changes in their expression, along with the loss of the AP-2α transcription factor: indeed, CREB expression correlates directly with metastatic transformation [96], whereas ATF-1, which is absent in normal melanocytes, is then expressed in the metastatic melanoma cells [97]. In different cell types, CREB and ATF-1 have been shown to act as negative regulators of apoptosis as these proteins appear to rescue cells from apoptotic death through upregulation of Bcl-2 expression, with binding of CREB and ATF-2 to a CRE domain within the Bcl-2 promoter (Figure 2).
Table 1. Overexpression of the CREB/ATF family members and the related transcription factors: granulocyte–macrophage colony-stimulating factor (GM-CSF); activating protein 2 alfa (AP-2α); B-cell lymphoma 2 (Bcl-2); G-protein-coupled receptor 81 (GPR81); microRNA 1297 (mir-1297); P-glycoprotein (P-gp); G-protein-coupled receptor kinase 3 (GRK-3α). ↑ = increased expression; ↓ decreased expression.
Figure 2. Different PKC isoforms respond to DNA damage in different ways: while PKCδ accumulates in the nucleus and induces apoptosis, other PKCs act on Bcl2/P-Bad and on P-CREB to promote cell survival. - - -→ = response to DNA damage; ––> = activation; ––> = inhibition; ––> = consequentiality.
CREB also has an important role in breast cancer through its interactions with tumour-promoting G-protein-coupled receptor 81 (GPR81), which is involved in the promotion of angiogenesis and breast cancer cell survival in the tumour microenvironment [98]. For instance, in the MCF7 breast cancer cell line, GPR81 activation has been shown to promote CREB phosphorylation, and thus the nuclear translocation of the active form of CREB. PI3K/Akt suppression was shown to block this GPR81-induced activation of CREB and subsequently inhibit expression of the proangiogenic mediator amphiregulin (AREG) and thus angiogenesis. Therefore, the pathway that involves PI3K/Akt and CREB can promote tumour-associated angiogenesis [98].
High constitutive expression of CREB has been observed in the immortalised Jurkat T lymphocyte cell line [99]; therefore, CREB might sustain the proliferation of lymphoid leukaemia cells. Indeed, the involvement of CREB in the pathogenesis of myeloid and lymphoid leukaemia has already been demonstrated [100]. Interestingly, a recent study revealed the association between CREB1 overexpression with metastasis, tumor stage, and poor outcomes in gastric cancer [101]. Moreover, CREB has an important role in the progression of hepatocellular carcinoma (HCC) by promoting angiogenesis and resistance to apoptosis [102]. It is possible that CREB confers drug resistance to HepG2 cells through activation of the human multidrug resistance 1 (mdr1) gene and consequent increase in P-glycoprotein (P-gp) [103], along with activation of the bcl-2 antiapoptotic gene [104]. In neuroendocrine prostate cancer, the CREB/G-protein-coupled receptor kinase (GRK) 3 axis promotes neuroendocrine differentiation of the prostate cancer cells, whereas CREB activation is mediated by GRK3. Hence, it appears that GRK3 represents a drug target for the treatment of patients with aggressive prostate cancers [105]. Moreover, GRK3 has oncogenic roles in different human cancers including prostate cancer [106], acute myeloid leukaemia [107], and pancreatic cancer [108], and its activity can be regulated by CREB in lung cancer [109]. Thus, in these human cancers, overexpression, or increased activity of CREB promotes disease progression [100].

7. Conclusions

Radiotherapy is the standard treatment of choice for patients with solid tumours and haematological malignancies although it induces the death not only of malignant cells, but also of healthy cells. However, cells can escape apoptotic death through activation of various survival factors. One of these factors is CREB, which is upregulated in various tumours treated with radiotherapy. This CREB upregulation leads to increased cell proliferation, reduced apoptosis, and enhanced cell migration and contributes to metastatic transformation of cells, as well as to angiogenesis. Along with CREB, ATF and NF-κB are also upregulated in different types of malignancies. Considering this, ionising radiation can also become a potential carcinogen, and thus it is important to consider the doses used. In addition, although the key role of CREB is evident in this context, it should not be considered the only therapeutic target. Indeed, further studies are needed to clarify other molecular players involved in mediating tumour radioresistance to identify novel, more efficient combined treatments designed on an individual patient and tumour basis.

Author Contributions

Writing—original draft preparation, G.S. and F.P.; writing—review and editing, G.S., F.G., L.C. and R.D.P.; supervision, R.D.P. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded with MIUR (Italian Ministry of University and Research) research funds granted in 2017 to Roberta Di Pietro and Lucia Centurione.

Institutional Review Board Statement

Not applicable.

Acknowledgments

The authors are grateful to Pierpaolo Nicolì for his contribution to artwork.

Conflicts of Interest

The authors declare no conflict of interest.

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