Medical Marijuana and Treatment Personalization: The Role of Genetics and Epigenetics in Response to THC and CBD
Abstract
1. Introduction
2. Materials and Methods
2.1. Research
2.2. Information Sources and Search Strategy
3. Fundamentals of Genetics and Epigenetics in the Context of Marijuana
3.1. Pharmacogenomics of Cannabinoids (THC, CBD, and Other Phytocannabinoids)
3.1.1. Phase I Enzymes: CYP2C9, CYP2C19, CYP3A4/5
3.1.2. Phase II Enzymes: UGT
3.1.3. CNR1/CNR2 Biology and Current Limits of Receptor Pharmacogenomics
PGx Relevance
3.1.4. Endocannabinoid Degradation Enzymes: FAAH (C385A/rs324420)
3.1.5. Dopaminergic Genes/Modulators: COMT Val158Met
3.1.6. PGx/DDI—Practical Basics in Cannabinoid Therapy
- (1)
- (2)
- (3)
- (1)
- CYP2C9–THC: *2/*3 → ↑ exposure/11-OH-THC (orally); a lower starting dose and slower titration should be considered (description in Section 4.1).
- (2)
- CBD–CYP2C19/3A–clobazam: inhibition → ↑ N-CLB; IM/PM require careful titration and monitoring.
- (3)
- UGT1A9/UGT2B7: inhibition by CBD (THC to a lesser extent) → possible DDI with opioids (description in Section 3.1.2).
- (4)
- ABCB1 rs2235048: modulation of acute reactions after inhalation (description in Section 4.1).
- (5)
- AKT1 rs2494732: ↑ sensitivity to acute psychotomimetic effects; COMT without consistent interaction (meta-analysis) (description in Section 4.2).
- (6)
3.1.7. AKT1 as a Downstream Modulator of Cannabinoid Signaling
4. Medical Marijuana in the Context of Genetics—A Review of Clinical Studies
4.1. Pharmacokinetics and Pharmacodynamics—A PGx- and DDI-Oriented Approach
4.1.1. CYP Enzymes (CYP2C9, CYP2C19, and CYP3A)
4.1.2. UGT Transferases
4.1.3. Transporters (ABCB1)
4.1.4. Receptors and the Endocannabinoid System (CNR1/CNR2, FAAH, and AKT1)
4.2. Results of the Clinical Trial Review
- (1)
- Neuropsychiatric Effects and Safety
- (2)
- Chronic pain—pharmacogenetics of response to MM
- (3)
- Drug-resistant epilepsy—the intersection of pharmacogenetics and drug interactions
- (4)
- Pharmacokinetics of THC/CBD—Implications for Genotype-Dependent Dosing
4.2.1. Clinical Implications (Proposed Practical Algorithm)
- (1)
- It is proposed to consider limiting or avoiding high doses of THC in patients with positive family histories of psychosis; in situations of increased risk, targeted testing for AKT1 rs2494732 may be useful (clinical evidence of G×E) [10].
- (2)
- In light of data from 600 patients, genetic factors (ABCB1/TRPV1/UGT2B7) may differentiate the response; in practice, consider documenting the phenotypic response and (when available) panel pharmacogenetic testing during long-term MM treatment [74].
- (3)
- Epilepsy—safety and efficacy:
- •
- When combining CBD with clobazam, it is recommended to start with lower doses of clobazam (or a slower titration) in individuals who are CYP2C19 PM/IM and to routinely monitor N-CLB levels and adverse effects [75].
- •
- It should be noted that CBD inhibits CYP2C19/3A—the effect can be intensified by the PM genotype and other inhibitors [8].
- (4)
4.2.2. Limitations of Current Data
5. Epigenetic Pathways of Cannabinoid Action
5.1. The Endocannabinoid System and the Framework of Epigenetics
5.2. Epigenetic Mechanisms Activated by Cannabinoids
5.2.1. DNA Methylation
5.2.2. Histone Modifications and Chromatin Architecture
5.2.3. Non-Coding RNA (miRNA, lncRNA)
5.3. Exogenous Cannabinoids: From Receptor Signaling to the Epigenome
5.3.1. Δ9-Tetrahydrocannabinol (THC)
5.3.2. Cannabidiol (CBD)
5.4. Developmental Windows and Intergenerational Transmission
5.4.1. Prenatal Exposure
5.4.2. Male Line: Sperm Epigenome
5.5. Diseases and Clinical Contexts
5.6. Methodological and Therapeutic Implications
5.6.1. Tissue and Temporal Specificity
5.6.2. Pharmacological Effects
6. Reversibility and Persistence of Epigenetic Changes
6.1. Molecular Mechanisms: How Cannabinoids Interact with the Epigenome
6.2. Evidence in Humans: Blood Methylation, Epigenetic Aging, and Exposure Signatures
6.3. Reversibility and Persistence: Conclusions from Gametes and Somatic Lines
6.4. Transgenerationality: Knowns and Unknowns
6.5. Clinical Implications for Medical Marijuana
6.5.1. Epigenetic Safety
6.5.2. Epigenetic Age and Comorbidities
6.5.3. Pharmacogenomics and Response Prediction
6.6. Proposed Epigenomics-Based Framework for Treatment Personalization
- (1)
- Preliminary clinical qualification—indications with confirmed efficacy (e.g., neuropathic pain, spasticity, and selected epileptic syndromes), with an assessment of risk factors.
- (2)
- Exposure and risk profile—an “exposure” DNAm panel derived from replicable EWAS (e.g., signatures associated with cannabis use and epigenetic aging), for informational purposes only and not a substitute for clinical monitoring.
- (3)
- Stratification and drug selection—decision on chemotype and route of administration, taking into account the patient profile (age, comorbidities, and interaction potential), with a plan for dose reduction when planning conception (in men).
- (4)
- Monitoring response and safety—linking clinical indicators (pain scales and function) with longitudinal blood draws for exploratory DNAm profiling (research/”learning health system”) to build predictors.
- (5)
- Validation and implementation—applying a five-phase biomarker assessment framework (first: pre-clinical analysis; second: clinical evaluation; third: utility), in accordance with current guidelines for epigenetic biomarkers [98].
6.7. Limitations of Current Data
7. Perspectives on Therapy Personalization
7.1. The Biological Basis and Clinical Pharmacology of Cannabis
7.1.1. Metabolism and Individual Differences
7.1.2. Sex or Population Section Differences
7.1.3. The Supply Chain and Personalization
7.2. Clinical Evidence in Major Indications and Implications for Personalization
7.2.1. Chronic Pain
7.2.2. Spasticity in Multiple Sclerosis (MS)
7.2.3. Drug-Resistant Epilepsy (Developmental Epilepsies)
7.3. Pharmacogenetics, Drug Interactions, and Safety as Pillars of Personalization
7.3.1. Pharmacogenetics (CYP)
7.3.2. Drug–Drug Interactions (DDIs)
7.3.3. Security Profile
7.4. The “Entourage Effect”, the Chemical Composition of Cannabis, and Implications for Personalization
7.5. Real-World Data (RWE) and Long-Term Effectiveness
7.6. Cannabinoids and “Opioid-Sparing”: What Does It Mean for Personalization?
7.7. Personalization Methods: Titration, Decision Algorithms, and Research Design
7.7.1. Principles of Practical Titration
7.7.2. N-of-1 and Adaptive Statistical Approaches
7.8. A Proposed Decision-Making Framework for Personalizing MM Therapy
- (1)
- Pre-stratification
- (2)
- DDI and PGx Risk Assessment
- (3)
- Selection of the preparation and route of administration
- (4)
- Titration and Result Monitoring
- (5)
- “Safety first”
8. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
References
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| Gene | Variant/Genotype | Predicted Metabolic Phenotype | Possible PK/PD Effect (THC/CBD) | Notes | Ref. |
|---|---|---|---|---|---|
| CYP2C9 | *1/*1 (NM) | Normal metabolizer | Typical exposure to THC and 11-OH-THC; standard clinical response | Strong contribution of CYP2C9 to THC clearance shown in vitro and in silico | [2,3,4,5] |
| CYP2C9 | *1/*2 or *1/*3 (IM) | Intermediate metabolizer (↓ activity) | ↑ AUC/Cmax of THC and 11-OH-THC; potential increase in adverse effects (sedation, dizziness) | Effects depend on dose and route; consider careful dose titration | [2,3,4,5] |
| CYP2C9 | *2/*2, *2/*3 or *3/*3 | Poor metabolizer (marked ↓ activity) | Marked ↑ exposure to THC; higher risk of excessive psychoactive effects | Strongest effect with *3/*3; population differences in allele frequencies | [2,3,4,5] |
| CYP2C19 | *1/*1 (NM) | Normal metabolizer | Typical rate of 7-OH-CBD (active metabolite) formation | CYP2C19 is key for CBD | [2,4,5] |
| CYP2C19 | *2 or *3 (LOF); genotypes *1/*2, *1/*3, *2/*2, *2/*3, *3/*3 | Intermediate/poor metabolizer | ↓ Formation of 7-OH-CBD; potentially reduced metabolic activation | Impact on total CBD exposure may be complex (other compensatory pathways) | [2,4,5,6,8] |
| CYP2C19 | *17 (GOF); genotypes *1/*17, *17/*17 | Rapid/ultrarapid metabolizer | ↑ Formation of 7-OH-CBD; possible ↓ exposure to parent CBD | Clinical relevance depends on indication and dose (e.g., epilepsy) | [2,4,5] |
| CYP3A4 | Functional variants (e.g., *22) | Variable (often small) impact | Potential ↓ oxidative clearance of THC (8-OH-THC) and CBD; usually secondary effect | Contribution of CYP3A4/5 is smaller than that of CYP2C9 (THC) and CYP2C19 (CBD) | [2,3,4,5] |
| CYP3A5 | *3/*3 (non-expresser) vs. *1 carrier | Absence/presence of enzyme expression | Minor differences in THC/CBD oxidation; clinical significance unclear | Role of CYP3A5 in cannabinoid metabolism appears limited | [2,3,4,5] |
| Pathway/Gene | Phenotype/Allele | DDI (Direction) | PK/PD Effect | Recommendation |
|---|---|---|---|---|
| CYP2C9 | IM/PM: *2/*3 (and *2/*2, *3/*3) | ― (no specific THC “perpetrator” DDIs; risk of phenoconversion with strong CYP2C9 inhibitors) | ↑ AUC of THC and 11-OH-THC (especially after oral dosing) → ↑ risk of sedation/CNS AEs | Lower THC starting dose; slower titration (“start low, go slow”); educate about sedation/driving |
| CYP2C19 | IM/PM (e.g., *2/*2, *2/*3, *2/*17) | CBD—inhibitor of CYP2C19/3A → ↑ N-desmethylclobazam (N-CLB) when combined with clobazam | ↑ N-CLB exposure → ↑ risk of sedation/AEs; possible ↑ AUC of 7-OH-CBD | Consider reducing clobazam dose; slower CBD titration; monitor for sedation and/or N-CLB, especially in IM/PM |
| UGT2B7 | ― (polymorphisms of unclear effect; cannabinoid/drug influence is key) | CBD (more than THC) inhibits selected UGTs (UGT1A9/UGT2B7) → potential DDIs with glucuronidated drugs (e.g., opioids) | Possible ↓ clearance of UGT substrates → accumulation and AEs (e.g., respiratory depression with opioids) | Avoid high CBD doses with narrow-therapeutic-index glucuronidated drugs; consider clinical/lab monitoring |
| ABCB1 (P-gp) | rs2235048 and other transporter variants | ― (not a DDI, but altered CNS transport) | Differences in acute psychoactive response (e.g., after inhalation) due to blood–brain barrier transport of cannabinoids | Caution with high-THC products; patient education; consider avoiding highly psychoactive chemotypes in sensitive individuals |
| CpG Markers/Signature | Direction of Change in Users vs. Non-Users | Typical Δβ Range | Tissue/Sample Type | Reversible? * |
|---|---|---|---|---|
| EWAS panel of cannabis-associated CpGs (CARDIA; ~201 sites) | Mixed (both hyper- and hypomethylation) | Usually Δβ < 5% | Peripheral blood (adult cohorts) | Partly reversible vs. exposure; some sites track recent use, others reflect cumulative exposure and persist in former users |
| Trans-ancestry EWAS meta-analysis (ever vs. never use) | Mixed; small effect sizes at individual CpGs | Usually Δβ < 5% | Peripheral blood (multi-cohort blood samples) | Likely stable exposure markers; persistence observed in midlife long-term users |
| Sperm CpGs in male cannabis/THC users | Both hyper- and hypomethylation at thousands of CpGs, enriched in developmental genes | Small-to-moderate changes at many sites (individual loci with larger Δβ) | Sperm (human; supported by rat THC models) | Partly reversible after ~11 weeks of abstinence (≈one spermatogenesis cycle), but a subset of loci remains differentially methylated |
| CpGs in placenta/fetal tissues after prenatal THC exposure | Mixed; enrichment in neurodevelopmental pathways | Small-to-moderate Δβ (locus-dependent) | Placenta and fetal/neurodevelopmental tissues | Not clearly reversible; signatures appear persistent across development in animal/human translational data 3 |
| Pathway/Gene | Phenotype | Evidence Level | Clinical Readiness |
|---|---|---|---|
| CYP2C9–THC | Exposure/sedation | RCT + PK studies | Ready for dose-titration recommendations |
| CBD–CYP2C19–clobazam | N-CLB accumulation, AEs | RCT + PK | Ready for monitoring/dose adjustment |
| AKT1 rs2494732 | Acute psychotomimetic effects, psychosis risk | Translational + human cohorts | Useful for high-risk stratification, not routine |
| COMT Val158Met | Cannabis × psychosis | Meta-analysis negative | Not recommended for routine use |
| ABCB1/TRPV1/UGT2B7 | Analgesic response | Single observational cohort | Exploratory only |
| Epigenetic signatures | Exposure, epigenetic age | EWAS, sperm studies | Safety/exposure research tools |
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Kalak, M.; Brylak-Błaszków, A.; Błaszków, Ł.; Kalak, T. Medical Marijuana and Treatment Personalization: The Role of Genetics and Epigenetics in Response to THC and CBD. Genes 2025, 16, 1487. https://doi.org/10.3390/genes16121487
Kalak M, Brylak-Błaszków A, Błaszków Ł, Kalak T. Medical Marijuana and Treatment Personalization: The Role of Genetics and Epigenetics in Response to THC and CBD. Genes. 2025; 16(12):1487. https://doi.org/10.3390/genes16121487
Chicago/Turabian StyleKalak, Małgorzata, Anna Brylak-Błaszków, Łukasz Błaszków, and Tomasz Kalak. 2025. "Medical Marijuana and Treatment Personalization: The Role of Genetics and Epigenetics in Response to THC and CBD" Genes 16, no. 12: 1487. https://doi.org/10.3390/genes16121487
APA StyleKalak, M., Brylak-Błaszków, A., Błaszków, Ł., & Kalak, T. (2025). Medical Marijuana and Treatment Personalization: The Role of Genetics and Epigenetics in Response to THC and CBD. Genes, 16(12), 1487. https://doi.org/10.3390/genes16121487

