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Genes
  • Review
  • Open Access

26 August 2021

Genetic Markers of Differential Vulnerability to Sleep Loss in Adults

and
Biological Rhythms Research Laboratory, Department of Psychiatry and Behavioral Sciences, Rush University Medical Center, 1645 W. Jackson Blvd., Suite 425, Chicago, IL 60612, USA
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Author to whom correspondence should be addressed.
This article belongs to the Section Human Genomics and Genetic Diseases

Abstract

In this review, we discuss reports of genotype-dependent interindividual differences in phenotypic neurobehavioral responses to total sleep deprivation or sleep restriction. We highlight the importance of using the candidate gene approach to further elucidate differential resilience and vulnerability to sleep deprivation in humans, although we acknowledge that other omics techniques and genome-wide association studies can also offer insights into biomarkers of such vulnerability. Specifically, we discuss polymorphisms in adenosinergic genes (ADA and ADORA2A), core circadian clock genes (BHLHE41/DEC2 and PER3), genes related to cognitive development and functioning (BDNF and COMT), dopaminergic genes (DRD2 and DAT), and immune and clearance genes (AQP4, DQB1*0602, and TNFα) as potential genetic indicators of differential vulnerability to deficits induced by sleep loss. Additionally, we review the efficacy of several countermeasures for the neurobehavioral impairments induced by sleep loss, including banking sleep, recovery sleep, caffeine, and naps. The discovery of reliable, novel genetic markers of differential vulnerability to sleep loss has critical implications for future research involving predictors, countermeasures, and treatments in the field of sleep and circadian science.

1. Introduction

Located in the suprachiasmatic nuclei of the anterior hypothalamus, the biological clock, among other physiological processes, regulates the timing of sleep and wakefulness as well as waking behavior, creating circadian rhythmicity in neurobehavioral variables such as cognitive performance and sleepiness [1,2]. The two-process model of sleep regulation posits that a homeostatic process (Process S) and a circadian process (Process C) interact to modulate the timing of sleep onset and offset, as well as the stability of waking neurobehavioral functions [3,4,5,6,7]. Process S (the drive for sleep) increases while awake and decreases while asleep. Sleep onset occurs when the homeostatic drive increases above a certain threshold, and wakefulness is induced when it decreases below a different threshold [1]. Process C (the cycle of sleep and wakefulness) represents the daily oscillatory modulation of these thresholds and promotes wakefulness at certain times [8].
It is well established that sleep loss induces decrements in neurobehavioral functioning [4,9,10], and that there are robust, trait-like interindividual phenotypic differences related to the magnitude of such decrements, whereby some individuals are minimally affected by insufficient sleep (i.e., resilient) and others are greatly affected (i.e., vulnerable) [11,12,13,14,15,16,17,18].
This review explores the genetic underpinnings of phenotypic individual differences related to sleep deprivation, particularly in relation to differential neurobehavioral resilience and vulnerability. It also discusses the efficacy of various mitigation strategies for sleep loss-induced deficits including caffeine, naps, and recovery sleep, and examines candidate gene studies utilizing caffeine as a countermeasure. The review culminates with a discussion of future directions. Please refer to Figure 1 for a flowchart highlighting the main concepts discussed in this article and their relationships.
Figure 1. Flowchart depicting the relationships between the main concepts presented in the review. Solid black arrows indicate an established connection between the topics. Connections between genes and countermeasures are associative and not causal, thus warranting the need for further investigation.

2. Interindividual Differences in Neurobehavioral Responses to Sleep Loss

2.1. Metrics and Categorization of Neurobehavioral Resilience and Vulnerability to Sleep Loss

Common metrics of neurobehavioral functioning for classifying vulnerable and resilient individuals include behavioral attention tasks such as the Psychomotor Vigilance Test (PVT) [19], cognitive throughput tasks such as the Digit Symbol Substitution Test [20], working memory tests such as n-back tasks [21] and the Digit Span Task [22], measures of self-rated sleepiness such as the Karolinska Sleepiness Scale (KSS) [23], and measures of self-rated fatigue, vigor, and mood such as those derived from the Profile of Mood States (POMS) [24]. Importantly, numerous studies have reported that an individual’s resilience or vulnerability to sleep loss when assessing performance on objective and self-rated metrics are not related [12,17,18,25,26], making the determination of reliable categorization methods more complex. The use of a variety of neurobehavioral tests when conducting individual differences research mitigates this issue and allows for better cognitive endophenotyping (accurately capturing the complete essence of a cognitive phenotype through targeted measurements) [27].
Several approaches have been used to classify individuals as resilient or vulnerable in past research, although the optimal methods to do so remain unknown. The most common prior approaches either utilized raw performance or self-rated scores on neurobehavioral tasks during sleep deprivation [15,28,29,30,31] or utilized difference scores that accounted for baseline performance [32,33,34,35,36,37,38]. Intraindividual variance, which considers time-of-day variation in performance [9,39,40,41,42,43,44], has been posited as another potential method to characterize resilience or vulnerability to sleep deprivation. However, further research is needed regarding this approach, since only one published study using two commonly used cognitive measures has explicitly investigated intraindividual variation as a categorization method [45]. Furthermore, the threshold used to divide individuals into resilient and vulnerable groups has also varied in prior research—studies have utilized a median split [28,29,30,32,35,36,46,47,48,49,50], a tertile split [15,34,38,51], a quartile split [31,52], or other numeric divisions of neurobehavioral performance [33,53]. Nevertheless, although more research is needed to determine consistent categorizations and predictors of resilience and vulnerability based on neurobehavioral performance, it remains important to explore possible biological indicators of such characteristics.

2.2. Biomarkers and Predictors of Resilience and Vulnerability to Sleep Loss

While definitive predictors of neurobehavioral resilience and vulnerability to sleep loss have yet to be discovered, genetic and omics (e.g., epigenomic, transcriptomic, metabolomic, and proteomic) techniques have identified biomarkers (objective proxies of biological processes that allow for remote detection of such processes, regardless of their mechanistic role in the assessed condition [54]) to differentiate an individual’s response to chronic sleep restriction (SR; several consecutive nights with a reduction in total sleep time) or total sleep deprivation (TSD; one or more nights without sleep) [4]. While numerous biomarkers and other factors, such as neurobehavioral performance, are considered potential predictors of differential responses to sleep loss, genetic polymorphisms (variants in DNA sequence) are perhaps one of the most studied indicators (see Figure 1).

4. Countermeasures for the Detrimental Neurobehavioral Effects of Sleep Deprivation

The neurobehavioral and physiological effects of sleep loss are detrimental yet often are undetected by sleep-deprived individuals. Although the optimal way to protect against poorer neurobehavioral performance and adverse health outcomes that are associated with sleep deprivation is to consistently obtain sufficient sleep aligned with an individual’s circadian rhythms [99], societal and work demands often make this difficult to achieve. This is especially true for populations such as shift workers, students pulling “all-nighters”, on-call medical personnel, transmeridian travelers, and individuals whose jobs require extended wakefulness [9]. Sleep deprivation also directly impacts driving and accident risk—sleepiness-related crashes exhibit similar injury and fatality rates as alcohol-related crashes [100,101,102], though they are often underestimated [9,103,104,105,106]. Thus, mitigation strategies to combat the severity of such negative effects, including banking sleep, recovery sleep, caffeine, and naps, are critical. It is particularly important to investigate the efficacy of countermeasures in relation to the aforementioned candidate genes, as doing so may offer more definitive recommendations as to which individuals would benefit most from certain mitigation strategies based on their genetic make-up (see Figure 1).

4.1. Effects of Banking Sleep on Neurobehavioral Performance

Banking sleep—increasing sleep duration to 8–9 h per night for several consecutive nights—has been demonstrated to mitigate neurobehavioral decrements resulting from subsequent sleep loss, including diminished performance on sustained attention tasks [107,108] and high-cognitive-load decision tasks [109]. Banking sleep also has been reported to effectively manage fatigue, stress, and excessive daytime sleepiness [110,111], which may be useful in applied settings such as military operations [112] and shift work [113]. The beneficial effects of banking sleep have been found to persist during a recovery sleep opportunity following sleep deprivation [107,108]. Though promising, further research is needed to establish whether this strategy can reliably maintain neurobehavioral performance during sleep-deprived conditions and subsequent recovery, especially in relation to interindividual phenotypic and genotypic differences. Further research is also necessary to determine whether the utility of banking sleep may be greater for certain individuals; for example, although not yet examined, the BHLHE41/DEC2 polymorphism has been implicated in short sleep [74], which suggests that increasing sleep through banking may not be as effective for individuals with the P384R mutation.

4.2. Effects of Recovery Sleep on Neurobehavioral Performance

Recovery sleep—increased nightly sleep opportunity following a period of sleep deprivation—has also been proposed as a mitigation strategy to facilitate the restoration of several neurobehavioral measures after sleep loss. Some studies have shown that recovery sleep improved cognitive performance, reduced sleepiness, fatigue, and sleep propensity, increased alertness, and improved mood [114,115,116,117]. However, other studies have found that recovery sleep failed to completely reverse sleep deprivation-induced performance impairments on vigilance and working memory tasks, worsened inhibition as defined by a pinball task, and decreased self-rated vigor as defined by the POMS [10,117,118]. While reliable biomarkers of response to recovery sleep have yet to be discovered, interindividual differences may account for some of the discrepancies in research related to recovery sleep, since differential vulnerability could impact the amount of recovery sleep needed for certain aspects of neurobehavioral functioning to return to baseline levels [117]. Thus, it is important to further investigate biomarkers and genetic polymorphisms that may underlie differences in the effectiveness of recovery sleep.

4.3. Effects of Caffeine and Napping on Neurobehavioral Performance

The efficacy of caffeine in attenuating neurobehavioral performance deficits induced by sleep loss has been well established [119,120,121,122,123,124]. Acute caffeine consumption (using doses from <80 mg to 600 mg) has been shown to mitigate performance declines in sleep-deprived individuals in a variety of domains, including on attention, memory, information processing, executive functioning, and driving tasks (reviewed in [125]). As aforementioned, the efficacy of caffeine has also been linked to the ADORA2A [69,71] and COMT [67] genotypes, thus, further evincing caffeine’s biological utility. Notably, caffeine becomes less effective at preventing performance declines as the pressure for sleep increases during extended wakefulness [4]. In addition, robust individual differences in response to both sleep deprivation and caffeine confound the effectiveness of this mitigation strategy [4,123,124].
Napping during the day is another effective countermeasure to prevent performance declines in conditions of increased sleepiness and decreased alertness [126]. Although naps are beneficial, rest opportunities are typically followed by sleep inertia (a period of grogginess and diminished performance) upon awakening [127]. This has traditionally been thought to be especially true after longer naps during which slow-wave sleep is reached, though recent reports showed mixed findings [128]. Since naps alone are also unable to prevent the negative effects of sleep deprivation under all conditions [4,123,127] and across all neurobehavioral domains [129,130], the combination of caffeine consumption and a short nap may provide maximum protection against sleep-loss-induced decrements [127,131].

5. Conclusions and Perspectives

Adequate sleep is a biological imperative, essential for maintaining waking neurobehavioral performance, though it is often difficult to achieve. Thus, determining reliable predictors of differential vulnerability to sleep loss is crucial, given that diminished neurobehavioral functioning may negatively impact productivity and performance in a variety of real-world settings. As discussed, past research has identified several candidate genes and genetic polymorphisms related to circadian factors, neurotransmitter transmission, and immune and cognitive functioning, among others, which are associated with neurobehavioral resilience and vulnerability to sleep deprivation [67,80,82,84,85,89,90,91,93,98] (also see review [4]), and which are important components of individual differences research. Notably, some studies have also identified genetic polymorphisms involved in the efficacy of specific countermeasures used for sleep loss-induced deficits such as caffeine [67,69,71,98] (also see review [4]), suggesting that particular countermeasures may be more effective for certain individuals based on their own genetic profile. Importantly, establishing causality between specific genes and mitigation strategies through the candidate gene approach will enable the implementation of more individualized approaches for countering sleep loss-induced deficits, which is especially important for maximizing neurobehavioral functioning in applied settings.
It also is important to investigate the genetic determinants of resilience and vulnerability in diverse demographic and clinical populations. Studies have reported the influence of ethnicity and/or race on sleep characteristics [132,133,134,135], which are likely impacted by genetic ancestry and social and environmental pressures. Additionally, although associations between various candidate genes (e.g., ADA, ADORA2A, PER3) and clinical and/or sub-clinical symptomology and conditions have been shown [136,137,138,139,140], genotypic relationships between such symptomology and neurobehavioral performance have not been directly examined in the context of sleep loss. Interindividual differences in self-rated personality traits have also been proposed as factors contributing to differences in sleep characteristics [141,142] and to differential vulnerability to sleep loss [143]; however, the polygenetic and complex nature of personality makes it difficult to conduct genetic studies exploring this relationship. Further research on the genetic underpinnings of neurobehavioral responses to sleep deprivation is necessary to create a more generalizable framework of resilience and vulnerability to sleep loss-induced decrements. Overall, investigating such topics will lead to the development of personalized countermeasures and treatments based on an individual’s genetic and neurobehavioral performance profiles, which is critical for optimizing functioning in applied settings involving extended wakefulness.

Author Contributions

Writing—original draft preparation, C.E.C. and N.G.; writing—review and editing, C.E.C. and N.G.; funding acquisition, N.G. All authors have read and agreed to the published version of the manuscript.

Funding

This review was supported by National Aeronautics and Space Administration (NASA) grant NNX14AN49G and grant 80NSSC20K0243 (to N.G.), and National Institutes of Health grant NIH R01DK117488 (to N.G.). The APC was funded by a research account from Rush University Medical Center (to N.G.).

Institutional Review Board Statement

Not applicable.

Data Availability Statement

No new data were created in this study. Data sharing is not applicable to this article.

Conflicts of Interest

The authors declare no conflict of interest. The funders had no role in the following: preparation, review, or approval of the manuscript.

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