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Open AccessArticle

Engineering CatM, a LysR-Type Transcriptional Regulator, to Respond Synergistically to Two Effectors

1
Departments of Microbiology, University of Georgia, Athens, GA 30602, USA
2
Pharmaceutical and Biomedical Sciences, University of Georgia, Athens, GA 30602, USA
*
Author to whom correspondence should be addressed.
Genes 2019, 10(6), 421; https://doi.org/10.3390/genes10060421
Received: 29 April 2019 / Revised: 24 May 2019 / Accepted: 30 May 2019 / Published: 31 May 2019
(This article belongs to the Special Issue Genetics of Biodegradation and Bioremediation)

The simultaneous response of one transcriptional regulator to different effectors remains largely unexplored. Nevertheless, such interactions can substantially impact gene expression by rapidly integrating cellular signals and by expanding the range of transcriptional responses. In this study, similarities between paralogs were exploited to engineer novel responses in CatM, a regulator that controls benzoate degradation in Acinetobacter baylyi ADP1. One goal was to improve understanding of how its paralog, BenM, activates transcription in response to two compounds (cis,cis-muconate and benzoate) at levels significantly greater than with either alone. Despite the overlapping functions of BenM and CatM, which regulate many of the same ben and cat genes, CatM normally responds only to cis,cis-muconate. Using domain swapping and site-directed amino acid replacements, CatM variants were generated and assessed for the ability to activate transcription. To create a variant that responds synergistically to both effectors required alteration of both the effector-binding region and the DNA-binding domain. These studies help define the interconnected roles of protein domains and extend understanding of LysR-type proteins, the largest family of transcriptional regulators in bacteria. Additionally, renewed interest in the modular functionality of transcription factors stems from their potential use as biosensors. View Full-Text
Keywords: LysR; transcription factor; Acinetobacter; LTTR; benzoate; muconate; synergism; biosensor LysR; transcription factor; Acinetobacter; LTTR; benzoate; muconate; synergism; biosensor
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Tumen-Velasquez, M.P.; Laniohan, N.S.; Momany, C.; Neidle, E.L. Engineering CatM, a LysR-Type Transcriptional Regulator, to Respond Synergistically to Two Effectors. Genes 2019, 10, 421.

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