Aberrations of Chromosomes 1 and 16 in Breast Cancer: A Framework for Cooperation of Transcriptionally Dysregulated Genes
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Description: Figure S1: schematic workflow of analysis performed in the study. Figure S2: The Normalized Chromosomal Distribution Index (NCDI) of 1q-OverT and 16q-UnderT calculated for each cyto-genetic band of a single chromosome arm. Figure S3: Values of the “modified linear FCvsCTRL” for some representative genes belonging to cluster 1, 3 and 4. Figure S4: Oncoplot showing point mutations detected by WES in 645 samples out of 709 ductal and 149 lobular BRCA samples ana-lysed in TCGA study. Figure S5: Oncoplots showing point mutations detected by WES in 1,16-chromogroups. Table S1: Number samples of SNP-arrays RNAseq and WES analysis, Table S2: 1q-OverUpT in all 1,16-chromogroups, Table S3: 16q-UnderT in all 1,16-chromogroups, Table S4: Metascape_result, Table S5: Analysis I and II GSEA Real Values, Table S6: Analysis I and II GSEA ABS values, Table S7: LvsD DEGs.
Privitera, A.P.; Barresi, V.; Condorelli, D.F. Aberrations of Chromosomes 1 and 16 in Breast Cancer: A Framework for Cooperation of Transcriptionally Dysregulated Genes. Cancers 2021, 13, 1585. https://doi.org/10.3390/cancers13071585
Privitera AP, Barresi V, Condorelli DF. Aberrations of Chromosomes 1 and 16 in Breast Cancer: A Framework for Cooperation of Transcriptionally Dysregulated Genes. Cancers. 2021; 13(7):1585. https://doi.org/10.3390/cancers13071585
Chicago/Turabian StylePrivitera, Anna Provvidenza, Vincenza Barresi, and Daniele Filippo Condorelli. 2021. "Aberrations of Chromosomes 1 and 16 in Breast Cancer: A Framework for Cooperation of Transcriptionally Dysregulated Genes" Cancers 13, no. 7: 1585. https://doi.org/10.3390/cancers13071585