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20 December 2025

Novel Antimicrobial Activities of Albofungin, Albonoursin, and Ribonucleosides Produced by Streptomyces sp. Caat 5-35 Against Phytopathogens and Their Potential as a Biocontrol Agent

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1
Grupo BiotecGen, Departamento de Biología, Microbiología y Afines, Facultad de Ciencias Básicas, Universidad Popular del Cesar, Diagonal 21 # 29-56, Valledupar 200004, Colombia
2
Departamento de Biociencias, Facultad de Ciencias, Universidad Nacional de Colombia, Sede Medellín, Carrera 65 # 59A-110, Medellín 050034, Colombia
3
Departamento de Química, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto—FFCLRP, Universidade de São Paulo-USP, Ribeirão Preto 14040-901, SP, Brazil
4
Embrapa Meio Ambiente, Jaguariúna 13918-110, SP, Brazil
Molecules2026, 31(1), 21;https://doi.org/10.3390/molecules31010021 
(registering DOI)
This article belongs to the Special Issue Natural Products as New Antiviral/Antiparasitic/Antibacterial/Antimicrobial Treatment Options

Abstract

The genus Streptomyces is the largest group within the phylum Actinobacteria, recognized for producing antibiotics and enzymes, with wide applications in medicine and biological control for crop protection against phytopathogens. In this study, the Streptomyces sp. Caat 5-35 strain, isolated from soil of the Caatinga biome in Brazil, and identified by analysis of the 16S rRNA gene, demonstrated its antagonistic effect in vitro in dual cultures against Phytophthora palmivora, Colletotrichum acutatum, Fusarium oxysporum, Rhizoctonia solani, Sclerotinia sclerotiorum, and Fusarium graminearum. Caat 5-35 inhibited mycelial growth ranging from 19% to 73.3%. Compounds purified by prep-HPLC from extracts were identified by spectral data analysis using UHPLC-triple-TOF-MS/MS, or nuclear magnetic resonance (NMR). This work demonstrated for the first time the anti-oomycete activity of albofungin, its derivatives, and albonoursin against P. palmivora. Moreover, the growth inhibition of Colletotrichum gloeosporioides by albonoursin and the antibacterial effect of 2-chloroadenosine and 5′-O-sulfamoyl-2-chloroadenosine against Pectobacterium carotovorum were demonstrated as novel findings. Caat 5-35 exhibited the ability to solubilize phosphates and produce cellulases on CMC agar. The findings of this study, in combination with in vitro bioassays on cacao pods (Theobroma cacao L.) inoculated with the antagonist strain and P. palmivora APB-35, demonstrate that Streptomyces sp. Caat 5-35 is a source of natural products with applications in agriculture and could serve as an alternative for crop protection.

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