Search Results (55)

Arbuscular mycorrhizal fungi (AMF) form symbiotic relationships with most crops. They function as promising sustainable agricultural amendments by synergizing with biochar to enhance plant nutrient uptake. However, the effects of AMF and biochar interactions on the yield and nutrient uptake of leguminous crops and the underlying mechanisms remain insufficiently understood. This study employed a two-factor experimental design. Under the baseline conditions of no fertilization (CK), chemical fertilizer application (CF), and biochar-based fertilizer application (BF), treatments with and without AMF inoculation were established, resulting in a total of six experimental treatments. Compared to BF treatment alone, the combined application of AMF and BF (AM + BF) synergistically increased soybean biomass (12.81%) and grain yield (19.45%). This synergistic effect was accompanied by increased plant nitrogen (14.04%) and potassium (21.82%) accumulation. Notably, despite the highest yield, the AM + BF treatment showed a 22.22% reduction in nodule formation rate. This reveals that plant nitrogen acquisition strategies have shifted from relying on biological nitrogen fixation to efficient mycorrhizal pathways, reflecting an inherent optimization of carbon economy. The PLS-SEM model revealed that AMF inoculation altered yield-driving mechanisms: in the absence of AMF, yield could be directly predicted by soil nutrient levels; however, this relationship was disrupted after AMF inoculation. The soil nutrient pathway became non-significant, indicating a transition from a soil chemistry-dependent model to a biologically driven one, where AMF–plant symbiosis became the primary regulator of nutrient uptake. These findings highlight that AMF-BF synergy creates a novel soil–plant feedback mechanism that enhances nutrient acquisition efficiency and optimizes carbon allocation, providing a sustainable approach to boost legume crop yields and reduce environmental footprints. Full article

Eukaryotes use diverse nutrient acquisition strategies, including autotrophy, heterotrophy, mixotrophy, and symbiosis, which shape the evolution of cell regulatory networks. The Target of Rapamycin (TOR) kinase is a conserved growth regulator that in most species functions within two complexes, TORC1 and TORC2. TORC1 is broadly conserved and uniquely sensitive to rapamycin, whereas the evolutionary distribution of TORC2 is less well-defined. We built a sensitive hidden Markov model (HMM)-based pipeline to survey core TORC1 and TORC2 components across more than 800 sequenced eukaryotic genomes spanning multiple major supergroups. Both complexes are present in early-branching lineages, consistent with their presence in the last eukaryotic common ancestor, followed by multiple lineage-specific losses of TORC2 and, more rarely, TORC1. A striking pattern emerges in which TORC2 is uniformly absent from photosynthetic autotrophs derived from primary endosymbiosis and frequently lost in those derived from secondary or tertiary events. In contrast, TORC2 is consistently retained in mixotrophs, which obtain carbon from both photosynthesis and environmental uptake, and in free-living obligate heterotrophs. These findings suggest that TORC2 supports heterotrophic metabolism and is often dispensable under strict autotrophy. Our results provide a framework for the evolutionary divergence of TOR signaling and highlight metabolic and ecological pressures that shape TOR complex retention across eukaryotes. Full article

Tropical peatlands in Indonesia are increasingly degraded by conventional oil palm practices involving drainage and chemical fertilizers. This study evaluates AeroHydro Culture (AHC), a method applying microbe-enriched organic media aboveground, as a sustainable alternative that maintains high groundwater levels while supporting plant productivity. Field trials were conducted at two sites: a managed plantation in Siak and a degraded, abandoned plantation in Pulang Pisau. Ten months after treatment, AHC plots showed development of aerial-like lateral roots, improved chlorophyll levels, and increased arbuscular mycorrhizae colonization (from 0–46% to 22–73% in Siak, and 1.7–20% to 16–60% in Pulang Pisau). In Siak, AHC significantly increased IAA-producing and proteolytic bacteria in the 0–25 cm soil layer and raised oil palm yield by 36% over controls. This yield benefit was sustained in 2025, five years after the initial application. In Pulang Pisau, AHC also enhanced microbial abundance and promoted growth in the native species Shorea balangeran, suggesting its potential for reforestation. Drone imagery confirmed visible long-term differences in canopy color, supporting lasting physiological improvement. These results demonstrate that AHC promotes plant–microbe symbiosis, enhances nutrient acquisition, and sustains oil palm yield under saturated conditions. AHC offers a promising strategy for peatland rehabilitation where ecological recovery and agricultural productivity must be achieved in parallel. Full article

The mycoheterotrophic orchid Gastrodia elata relies entirely on symbiosis with Armillaria for nutrient acquisition during tuber development. The signaling mechanisms underlying this interaction have long been a research focus, and several pathways, such as phytohormone-mediated signaling, have been reported. However, the role of plant-derived extracellular vesicles (PDEVs) in G. elata–Armillaria communication remains unexplored. In this study, we conducted a comprehensive lipidomic analysis of G. elata-derived extracellular vesicles (GDEVs) isolated from juvenile, immature (active symbiosis), and mature tubers. By employing high-resolution mass spectrometry and advanced statistical methods, we established a detailed EV lipidome profile for G. elata, identifying 996 lipid species spanning eight major classes. Distinct lipidomic remodeling was observed throughout tuber maturation. Notably, as the immature stage corresponds to the period of peak symbiotic activity, targeted lipidome comparisons enabled the identification of core lipid markers, particularly Glc-sitosterols and the polyketide 7,8-dehydroastaxanthin, which are highly enriched during active symbiosis and potentially associated with inter-kingdom communication. These findings suggest that developmentally regulated lipid transport via EVs plays a critical role in mediating G. elata–Armillaria interaction. Our work not only illuminates the contribution of vesicle lipids to plant–fungal interaction but also provides a methodological foundation for investigating EV-mediated signaling in non-model plant–microbe systems. Full article

Phosphorus (P) availability is a major constraint on plant growth in many forest ecosystems, yet the strategies by which different tree species acquire and utilize various forms of soil phosphorus remain poorly understood. This study investigated how coexisting tree species with contrasting mycorrhizal types, specifically arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) associations, respond to different phosphorus forms under field conditions. An in situ root bag experiment was conducted using four phosphorus treatments (control, inorganic, organic, and mixed phosphorus) across four subtropical tree species. A comprehensive set of fine root traits, including morphological, physiological, and mycorrhizal characteristics, was measured to evaluate species-specific phosphorus foraging strategies. The results showed that AM species were more responsive to phosphorus form variation than ECM species, particularly under inorganic and mixed phosphorus treatments. Significant changes in root diameter (RD), root tissue density (RTD), and acid phosphatase activity (RAP) were observed in AM species, often accompanied by higher phosphorus accumulation in fine roots. For example, RD in AM species significantly decreased under the Na₃PO₄ treatment (0.94 mm) compared to the control (1.18 mm), while ECM species showed no significant changes in RD across treatments (1.12–1.18 mm, p > 0.05). RTD in AM species significantly increased under Na₃PO₄ (0.030 g/cm³) and Mixture (0.021 g/cm³) compared to the control (0.012 g/cm³, p < 0.05), whereas ECM species exhibited consistently low RTD values across treatments (0.017–0.020 g/cm³, p > 0.05). RAP in AM species increased significantly under Na₃PO₄ (1812 nmol/g/h) and Mixture (1596 nmol/g/h) relative to the control (1348 nmol/g/h), while ECM species showed limited variation (1286–1550 nmol/g/h, p > 0.05). In contrast, ECM species displayed limited trait variation across treatments, reflecting a more conservative acquisition strategy. In addition, trait correlation analysis revealed stronger coordination among root traits in AM species. And AM species exhibited high variability across treatments, while ECM species maintained consistent trait distributions with limited plasticity. These findings suggest that AM and ECM species adopt fundamentally different phosphorus acquisition strategies. AM species rely on integrated morphological and physiological responses to variable phosphorus conditions, while ECM species maintain stable trait configurations, potentially supported by fungal symbiosis. Such divergence may contribute to functional complementarity and species coexistence in phosphorus-limited subtropical forests. Full article

Arbuscular mycorrhizal fungi (AMF) symbiosis has great potential in improving grapevine performance and reducing external input dependency in viticulture. However, the precise, strain-specific impacts of different AMF species on ‘Summer Black’ grapevine cuttings across multiple physiological and morphological dimensions remain underexplored. To address this, we conducted a controlled greenhouse pot experiment, systematically evaluating four different AMF species (Diversispora versiformis, Diversispora spurca, Funneliformis mosseae, and Paraglomus occultum) on ‘Summer Black’ grapevine cuttings. All AMF treatments successfully established root colonization, with F. mosseae achieving the highest infection rate. In detail, F. mosseae notably enhanced total root length, root surface area, and volume, while D. versiformis specifically improved primary adventitious and 2nd-order lateral root numbers. Phosphorus (P) uptake in both leaves and roots was significantly elevated across all AMF treatments, with F. mosseae leading to a 42% increase in leaf P content. Furthermore, AMF inoculation generally enhanced the activities of catalase, superoxide dismutase, and peroxidase, along with soluble protein and soluble sugar contents in leaves and roots. Photosynthetic parameters, including net photosynthetic rate (Pn), stomatal conductance (Gs), and transpiration rate (Tr), were dramatically increased in AMF-colonized cutting seedlings. Whereas, P. occultum exhibited inhibitory effects on several growth metrics, such as shoot length, leaf and root biomass, and adventitious lateral root numbers, and decreased the contents of Nitrogen (N), potassium (K), magnesium (Mg), and iron (Fe) in both leaves and roots. These findings conclusively demonstrate that AMF symbiosis optimizes root morphology, enhances nutrient acquisition, and boosts photosynthetic efficiency and stress resilience, thus providing valuable insights for developing targeted bio-fertilization strategies in sustainable viticulture. Full article

Despite chemical exchange often serving as the first step in plant–microbe interactions, the specialized chemical metabolites produced by grass–Epichloë endophyte symbiosis as mediators of host growth, nutrient acquisition, and modulators of the rhizosphere community under low-nitrogen conditions are areas lacking in knowledge. In this study, we investigated the plant growth-promoting effects of the Epichloë endophyte strain and identified the growth of the Epichloë strain under different types of nitrogen source treatments. In addition to the in vitro test, we evaluated growth performance for Epichloë endophyte–infected plants (E+) and Epichloë endophyte–free plants (E−) in a pot trial under 0.01 mol/L urea treatment. Seedlings from E+ and E− groups were collected to analyze the plant bacterial microbiome and root metabolites. The E. gansuensis endophyte strain was found not to produce indoleacetic acid (IAA), pectinase, or contain ferritin. The nitrogenase gene, essential for nitrogen fixation, was also absent. These results suggest that E. gansuensis endophyte strains themselves do not contain attributes to promote plant growth. Concerning N fertilization, it was observed an increase in the colony diameter of E. gansuensis strain was observed only in the NO₃⁻-N (NN) treatment, while inhibition was observed in the urea-N (UN) treatment. E. gansuensis endophyte symbiosis significantly increased tiller number and plant dry weight. Overall, our results suggest that the E+ plants had more root forks and greater average root diameter compared to E− plants under the UN treatment. In a pot experiment using UN, data from 16S rRNA amplicon sequencing revealed that E. gansuensis endophyte infection significantly altered the bacterial community composition in shoot and root, and significantly increased Shannon (p < 0.001) and Chao 1 (p < 0.01) indexes. The relative abundance of Acidobacteriota, Actinomycetota, Cyanobacteriota, Fibrobacterota, Myxococcota, and Patescibacteria in the shoot, and Cyanobacteriota, Pseudomonadota, and Verrucomicrobiota in the root were significantly increased by E. gansuensis endophyte infection. Similarly, E. gansuensis endophyte symbiosis shifted the metabolite composition of the host plants, with the E+ plants showing a higher number of metabolites than the E− plants. In addition, co-metabolism network analysis revealed that the positive relevance between exudates and microorganisms in the root of the E+ plants is higher than that of the E− plants. These findings provide valuable insights into the knowledge of the effects of the symbiotic relationship between host plants and Epichloë endophyte on interspecific interactions of plant microbiome, beneficial for harnessing endophytic symbiosis, promoting plant growth. Full article

The current study examined how pre-service early childhood teachers, through invented notation activities, intra-act with the agency of music and the environment to achieve a process of becoming-music, grounded in Barad’s agential realism, presuming that it is necessary to consider the encounter with music itself rather than perceiving it as a ‘teaching subject’. The collected data included 54 sets of invented notations performed by 22 pre-service teachers, recorded videos of their performances driven by their interpretations, their journals, and observational records and notes by the researcher. Qualitative analysis was conducted based on the intra-actions between the pre-service teachers and music. In the invented notation activity, pre-service teachers initiated their engagement by encountering musical concepts and experimenting with diverse art materials as well as daily-life items. They generated sounds and created three-dimensional invented notations designed to guide the performance of the sounds. Furthermore, they deeply responded to the symbols within the invented notations, connecting their daily lives and music. They continued to realize the becoming-music through the ongoing generation of N-dimensional sounds. Pre-service teachers, through invented notation activities, experienced musical thinking not as an acquisition of pre-established knowledge and skills but rather through a direct encounter with music itself. This suggests that invented notation activities provide a sustainable learning environment by facilitating a dynamic entanglement with music. Furthermore, it indicates that post-humanism, which proposes a relational symbiosis between human and nonhuman entities, serves as a fundamental framework for education for sustainable development. Full article

Salt accumulation can degrade soil properties, decrease its productivity, and harm its ecological functions. Introducing salt-tolerant plant species associated with arbuscular mycorrhizal fungi (AMF) can act as an effective biological method for restoring salinized soils. AMF colonize plant roots and improve their nutrient acquisition capacity. However, there is limited knowledge on how AMF affects the production of signaling molecules, e.g., abscisic acid (ABA), salicylic acid (SA), and jasmonic acid (JA), related to plant–microbe interactions under salinity. Here, we assess the potential benefits of the AMF Rhizophagus intraradices in enhancing plant growth and nutrient uptake in addition to modulating stress hormone signaling levels (ABA, SA, and JA) of the facultative halophyte Sulla carnosa under saline conditions. Plants were grown in pots filled with soil and irrigated with 200 mM NaCl for 1 month. AMF symbiosis substantially increased the shoot dry weight (+107%), root dry weight (+67%), photosynthetic pigment content (chlorophyll a, chlorophyll b, and carotenoids), and nutrient uptake (C, N, P, K, Cu, and Zn) while significantly limiting the increase in the shoot Na⁺ concentration and H₂O₂ content caused by salinity stress. Mycorrhizal symbiosis significantly enhanced the root and shoot SA levels by 450% and 32%, respectively, compared to the stressed non-inoculated plants, potentially contributing to enhanced systemic resistance and osmotic adjustment under saline conditions. Salt stress increased the shoot ABA content, especially in R. intraradices-inoculated plants (113% higher than in stressed non-mycorrhizal plants). These findings confirm that AMF mitigated the adverse effects of salinity on S. carnosa by increasing the SA and ABA levels and reducing oxidative damage. Full article

Background/Objectives:Maerua crassifolia, a threatened medicinal species endemic to drylands, exhibits a pronounced drought sensitivity. Despite the critical role of microorganisms, particularly bacteria and fungi, the microbial consortia in M. crassifolia’s rhizosphere remain underexplored. Methods: Metagenomic whole genome shotgun sequencing (WGS) was employed to elucidate the taxonomic composition of bacterial and fungal communities inhabiting the soil rhizosphere of M. crassifolia. Results: The data revealed a marked predominance of bacterial genomes relative to fungal communities, as evidenced by non-redundant gene analysis. Notably, arbuscular mycorrhizal fungi (AMF), specifically Rhizophagus clarus, Rhizophagus irregularis and Funneliformis geosporum, are key rhizosphere colonizers. This study confirmed the presence of phosphate-solubilizing bacteria (PSB), such as Sphingomonas spp., Cyanobacteria and Pseudomonadota, underscoring the critical role of these microorganisms in the phosphorus cycle. Additionally, the study uncovered the presence of previously uncharacterized species within the phylum Actinobacteria, as well as unidentified taxa from the Betaproteobacteria, Gemmatimonadota and Chloroflexota phyla, which may represent novel microbial taxa with potential plant growth-promoting properties. Conclusions: Findings suggest a complex, symbiotic network where AMF facilitate phosphorus uptake through plant–root interactions. In a tripartite symbiosis, PSB enhance inorganic phosphorus solubilization, increasing bioavailability, which AMF assimilate and deliver to plant roots, optimizing nutrition. This bacterial–fungal interplay is essential for plant resilience in arid environments. Future investigations should prioritize the isolation and characterization of underexplored microbial taxa residing in the rhizosphere of M. crassifolia, with particular emphasis on members of the Actinobacteria, Betaproteobacteria, Gemmatimonadota and Chloroflexota phyla to uncover their roles in nutrient acquisition and sustainability. Full article

Arbuscular mycorrhizal (AM) symbiosis, a mutually beneficial interaction between plant roots and AM fungi, plays a key role in plant growth, nutrient acquisition, and stress tolerance, which make it a major focus for sustainable agricultural strategies. This intricate association involves extensive transcriptional reprogramming in host plant cells during the formation of arbuscules, which are specialized fungal structures for nutrient exchange. The symbiosis is initiated by molecular signaling pathways triggered by fungal chitooligosaccharides and strigolactones released by plant roots, which act as chemoattractants and signaling molecules to promote fungal spore germination, colonization, and arbuscule development. Calcium spiking, mediated by LysM domain receptor kinases, serves as a critical second messenger in coordinating fungal infection and intracellular accommodation. GRAS transcription factors are key components that regulate the transcriptional networks necessary for arbuscule development and maintenance, while small RNAs (sRNAs) from both plant and fungi, contribute to modifications in gene expression, including potential bidirectional sRNA exchange to modulate symbiosis. Understanding the molecular mechanisms related to AM symbiosis may provide valuable insights for implementation of strategies related to enhancing plant productivity and resilience. Full article

Azolla is the only plant with a co-evolving nitrogen-fixing (diazotrophic) cyanobacterial symbiont (cyanobiont), Nostoc azollae, resulting from whole-genome duplication (WGD) 80 million years ago in Azolla’s ancestor. Additional genes from the WGD resulted in genetic, biochemical, and morphological changes in the plant that enabled the transmission of the cyanobiont to successive generations via its megaspores. The resulting permanent symbiosis and co-evolution led to the loss, downregulation, or conversion of non-essential genes to pseudogenes in the cyanobiont, changing it from a free-living organism to an obligate symbiont. The upregulation of other genes in the cyanobiont increased its atmospheric dinitrogen fixation and the provision of nitrogen-based products to the plant. As a result, Azolla can double its biomass in less than two days free-floating on fresh water and sequester large amounts of atmospheric CO₂, giving it the potential to mitigate anthropogenic climate change through carbon capture and storage. Azolla’s biomass can also provide local, low-cost food, biofertiliser, feed, and biofuel that are urgently needed as our population increases by a billion every twelve years. This paper integrates data from biology, genetics, geology, and palaeontology to identify the location, timing and mechanism for the acquisition of a co-evolving diazotrophic cyanobiont by Azolla’s ancestor in the Late Cretaceous (Campanian) of North America. Full article

Arbuscular mycorrhizal fungi (AMF) are soil microorganisms living in symbiosis with most terrestrial plants. They are known to improve plant tolerance to numerous abiotic and biotic stresses through the systemic induction of resistance mechanisms. With the aim of developing more sustainable agriculture, reducing the use of chemical inputs is becoming a major concern. After providing an overview on AMF history, phylogeny, development cycle and symbiosis benefits, the current review aims to explore the potential of AMF as biostimulants and/or biocontrol agents. Nowadays, AMF inoculums are already increasingly used as biostimulants, improving mineral nutrient plant acquisition. However, their role as a promising tool in the biocontrol market, as an alternative to chemical phytosanitary products, is underexplored and underdiscussed. Thus, in the current review, we will address the mechanisms of mycorrhized plant resistance to biotic stresses induced by AMF, and highlight the various factors in favor of inoculum application, but also the challenges that remain to be overcome. Full article

Arbuscular mycorrhizal fungi (AMF) and rhizobium play a significant role in plant symbiosis. However, their influence on the rhizosphere soil microbiome associated with nutrient acquisition and soil health is not well defined in the drylands of Montana (MT), USA. This study investigated the effect of microbial inoculants as seed treatment on pea yield, nutrient uptake, potential microbial functions, and rhizosphere soil microbial communities using high-throughput sequencing of 16S and ITS rRNA genes. The experiment was conducted under two contrasting dryland conditions with four treatments: control, single inoculation with AMF or Rhizobium, and dual inoculations of AMF and Rhizobium (AMF+Rhizobium). Our findings revealed that microbial inoculation efficacy was site-specific. AMF+Rhizobium synergistically increased grain yield at Sidney dryland field site (DFS) 2, while at Froid site, DFS 1, AMF improved plant resilience to acidic soil but contributed a marginal yield under non-nutrient limiting conditions. Across dryland sites, the plants’ microbial dependency on AMF+Rhizobium (12%) was higher than single inoculations of AMF (8%) or Rhizobium (4%) alone. Variations in microbial community structure and composition indicate a site-specific response to AMF and AMF+Rhizobium inoculants. Overall, site-specific factors significantly influenced plant nutrient uptake, microbial community dynamics, and functional potential. It underscores the need for tailored management strategies that consider site-specific characteristics to optimize benefits from microbial inoculation. Full article

Root biomass and length growth, functional traits, and their responses to soil nutrient availability are crucial for resource acquisition under environmental change. Previous studies have focused on the response of root morphological, architectural, and chemical traits to fertilization, while less attention has been given to root biomass and length growth, as well as mycorrhizal symbiosis, impeding a full understanding of root resource acquisition strategies. Here, using a nutrient addition experiment (control, inorganic, and organic nutrients), we explored the responses of function-based root (absorptive fine roots [AFRs] versus transport fine roots [TFRs]) growth, functional traits (morphological, architectural, and chemical traits), and mycorrhizal colonization of C. lanceolat and Q. acutissim, which are the dominant tree species in subtropical China. The results showed that the fine root biomass and total root length of AFRs for both tree species basically decreased significantly after nutrient addition, but TFRs responded less sensitively than AFRs. Nutrient addition significantly increased the mycorrhizal colonization rate in C. lanceolata but decreased it in Q. acutissima. The diameter of AFRs for C. lanceolata increased significantly, while the branch ratio and branch intensity decreased significantly in both inorganic nutrients (NPK) and organic nutrients (F); however, the opposite response pattern occurred for Q. acutissima. Fine root biomass, total root length, and root nutrient concentration exhibited the most plastic responses to changes in nutrient availability. The magnitude of the plastic response of fine root traits was slightly higher in the NPK treatment than in the F treatment. Our findings suggest that the responses of fine root traits and mycorrhizal fungi to nutrient addition were species-specific: C. lanceolata depended on mycorrhizal fungi for resource acquisition, while Q. acutissima could acquire soil nutrient resources by increasing root branching. The contrasting nutrient acquisition strategies between tree species may facilitate plant species coexistence and distribution under soil nutrient change. Fine root biomass and total root length emerged as more pivotal indicators for nutrient acquisition strategies compared to morphological traits. Full article